MD16G1140100.v1.1

YT521-B-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0006149
Physical Location & Seq
Forward (+)
10773053 .. 10777621
4569 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1140100.v1.1.491

Sequence Viewer

Length: 2088 bp
ATGTATAATGTTCCCGAGCATGCGAATGATGAGGTTTATATGATTCCGCACATGGAACAAAACCTGCGTTTTCCAACTCCCTTTGAACAAGTTGAAGCTATGTACAACGATGGAGCTCCTGAGTTTGTTGTTGATCAGGGCATGTATTATCCCGCTGCCACAAACTATGGGTATTACTGTACAGGATTTGAATCACCTGGTGAATGGGAGGACCACCGTAGGATTTTTGGAGTTGATGGTCCAGATATCCAGTACACGGGTGCCCAAAATGAAAGTTTGCCTTTTGTATACTATACACCTAGCTATGGATATGCACAGTCTCCATACAACCCATACAATCCTTACATACCTGGTGCTATGATAGGCGTTGATGGCCAACAGTATACCATCCCCCCTTATCAGAACTCTGTCTCTTCACCTTCCTATATCCCTTTTGTTCAACCAGATGCCATTCCCAACACTTCACCTGACTCCTTGTTTGATAATGGAGCATCAGTTACTAGACCCGATGGAGAAGGGGTCAAATACAACTTAAATTCAGCTTCTGGAGGCTTCCCTAACTCCTCGAAGTCCTCTTTAAATCAGATGAATCCCTTGACAAAAGTATCAGAAGGTCAAAGGGGTAATGGATCAAGCAAGCATGCTGCGACACATGGAGGCGTTTCTTCTGGTCGTTTTCCAACCCCACCCTCATCACATGTTAATCAGGTTAGAAGTGCATCCAGGTCAATTTCGTCTGTGGATAAACTTCCAAATGGGAAAGTATTGCCTAATAATTTCAAGGTGGAAATCCCCGTCGGTAATGGCTTATCTAACTTTGGATCTAGTGCTCAGGGAAGTGGTGCTGTGAGTAAGCTTCGACCAAAGTTTCATGTTGGCAGGGCCTTGAATGATGTACATGGTGGCCTAGAGGCATTGGGTGAGCAAAATTGTGGTCCTAGAATCAATAGGTTAAAAAATCAACTAGCTGTGAAAGCCTATACGACCAAGGCAGGAGATTGTGATGCACAAGGAAACATCATTATCCGTACTGATAAATATAATAAGGATGACCTGCCAGTTGACTATGCGGATGCAAAGTTTTTTGTAATAAAATCATACAGCGAGGATGATGTTCACAAAAGCGTCAAATACAATGTCTGGTCATCCACACCCCATGGCAACAAGAAACTAACTAGTGCATATGAAGATGCTCAAAGAATAGCTGCAGGAAAACATAGAGCCTGTCCTATCTTCCTTTTCTTTTCGGTTAATGCAAGTGGTCAATTCTGTGGCATAGCGGAGATGGGTGGCCCGGTTGACTTTAACAAGGATATGGACTTTTGGCAGCAAGATAAATGGAGTGGGAGCTTCCCTGTTAAGTGGCACATCATTAAAGATGTTCCAAATAACAGTTTCAGGCACATTGTATTGGAGAACAATGAAAACAAGCCAGTGACTAATAGCAGGGATACACAAGAGGTCATGTATAAGAAAGGCTTGGAGATTCTGAAAATATTCAAGAATCACACATTGAAGACATCTTTACTAGATGACTTTATGTACTACGAAGACCGTCAGAAAATCATGCAGGAAGAGAGAGGCAGGTTTCTTATCAGAAGCTTTGAAAGTCCATTTTTAGTAACTGGGCTGGGTCCCCCTCGCAAGCTGAACAACTCTGTGGGTGAGCTGCCCTGTATTAAGGAGGAAAAGGTCACCAAACTTAATGACAATGCAAACAACTCAAAAAAGACTACGGTCTCTGCTGCTGAGCAGGTTTCCTCCAACATTAGTGCTAAAACAAGTATCAAGAAAGAAAACACTGAGCAGAAGGCAATTGAAGCAAAAGATGATGTCGTGTCTACCTTAGAAATTGGTTCCCTCACTATTAATCCAAAGCAGGCAGGATCAAAATCTTCAGCAGCTGCTGTTACTAACACTGGAAAGGTTGATGTTGTCACCGTGGGCTCAATGCCCGTAAGAGTTAATGGATATGCTGAATCCTTGGGTAATTTAACGGTTGGAACAATTCCTCTGGATCCTAGAGCGTTACGACTAGAGAAGGGCGGCTCCATTATCGAAAAGGCTGCTCAACCTCAACAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

696

Amino Acids

76.32

Weight (kDa)

7.22

Isoelectric Point (pI)

35.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 359 - 501 6.3e-49 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 4 cut(s) 72, 1062, 1575, 1744
AccB1I GGYRCC 1 cut(s) 260
AccI GTMKAC 3 cut(s) 288, 383, 1841
AciI CCGC 5 cut(s) 47, 153, 1070, 1280, 2046
AclWI GGATC 5 cut(s) 637, 829, 1894, 2012, 2025
AcoI YGGCCR 1 cut(s) 373
AcsI RAATTY 1 cut(s) 535
AcuI CTGAAG 1 cut(s) 1881
AdeI CACNNNGTG 1 cut(s) 200
AfaI GTAC 6 cut(s) 104, 181, 254, 897, 1030, 1544
AfiI CCNNNNNNNGG 2 cut(s) 256, 305
AflIII ACRYGT 1 cut(s) 697
AhlI ACTAGT 1 cut(s) 1175
AjnI CCWGG 3 cut(s) 196, 349, 722
Alw21I GWGCWC 2 cut(s) 118, 832
Alw26I GTCTC 3 cut(s) 324, 415, 1744
AlwI GGATC 5 cut(s) 637, 829, 1894, 2012, 2025
AlwNI CAGNNNCTG 3 cut(s) 545, 1904, 1907
Ama87I CYCGRG 1 cut(s) 14
AoxI GGCC 4 cut(s) 373, 882, 904, 1291
ApeKI GCWGC 9 cut(s) 155, 644, 1205, 1327, 1669, 1745, 1901, 1904, 2066
ApoI RAATTY 1 cut(s) 535
ArsI GACNNNNNNTTYG 6 cut(s) 461, 493, 919, 951, 1122, 1154
AseI ATTAAT 1 cut(s) 1869
Asp700I GAANNNNTTC 1 cut(s) 1496
AspS9I GGNCC 6 cut(s) 211, 239, 882, 935, 1292, 1634
AsuC2I CCSGG 1 cut(s) 1295
AsuHPI GGTGA 8 cut(s) 186, 212, 408, 456, 932, 1676, 1687, 1930
AvaI CYCGRG 1 cut(s) 14
AvaII GGWCC 4 cut(s) 211, 239, 935, 1634
BaeGI GKGCMC 1 cut(s) 265
BaeI ACNNNNGTAYC 2 cut(s) 588, 621
BalI TGGCCA 1 cut(s) 375
BamHI GGATCC 1 cut(s) 2017
BanI GGYRCC 1 cut(s) 260
BanII GRGCYC 2 cut(s) 118, 1949
BbsI GAAGAC 2 cut(s) 1523, 1557
Bbv12I GWGCWC 2 cut(s) 118, 832
BbvI GCAGC 9 cut(s) 142, 631, 1192, 1339, 1656, 1732, 1891, 1913, 2053
BccI CCATC 6 cut(s) 104, 230, 365, 395, 503, 1279
BcgI CGANNNNNNTGC 2 cut(s) 2048, 2082
BciT130I CCWGG 3 cut(s) 198, 351, 724
BciVI GTATCC 1 cut(s) 1444
BclI TGATCA 1 cut(s) 133
BcnI CCSGG 1 cut(s) 1295
BcoDI GTCTC 3 cut(s) 324, 415, 1744
BcuI ACTAGT 1 cut(s) 1175
BfmI CTRYAG 1 cut(s) 1206
BfuAI ACCTGC 4 cut(s) 72, 1062, 1575, 1744
BfuI GTATCC 1 cut(s) 1444
BlpI GCTNAGC 1 cut(s) 1749
Bme1390I CCNGG 4 cut(s) 198, 351, 724, 1295
Bme18I GGWCC 4 cut(s) 211, 239, 935, 1634
BmeT110I CYCGRG 1 cut(s) 14
BmgT120I GGNCC 6 cut(s) 211, 239, 882, 935, 1292, 1634
BmiI GGNNCC 6 cut(s) 262, 1635, 1636, 1858, 2019, 2050
BmrFI CCNGG 4 cut(s) 198, 351, 724, 1295
BmrI ACTGGG 1 cut(s) 1635
BmsI GCATC 6 cut(s) 436, 500, 728, 994, 1063, 1180
BmuI ACTGGG 1 cut(s) 1635
BoxI GACNNNNGTC 1 cut(s) 1736
BpiI GAAGAC 2 cut(s) 1523, 1557
BpmI CTGGAG 1 cut(s) 567
Bpu10I CCTNAGC 1 cut(s) 831
Bpu1102I GCTNAGC 1 cut(s) 1749
BpuMI CCSGG 1 cut(s) 1295
BsaBI GATNNNNATC 2 cut(s) 190, 1891
BsaI GGTCTC 1 cut(s) 1744
BsaJI CCNNGG 4 cut(s) 987, 1156, 1941, 1983
BsaXI ACNNNNNCTCC 4 cut(s) 480, 504, 510, 534
Bsc4I CCNNNNNNNGG 2 cut(s) 256, 305
Bse1I ACTGG 5 cut(s) 250, 1058, 1433, 1630, 1924
Bse8I GATNNNNATC 2 cut(s) 190, 1891
BseBI CCWGG 3 cut(s) 198, 351, 724
BseDI CCNNGG 4 cut(s) 987, 1156, 1941, 1983
BseGI GGATG 6 cut(s) 387, 719, 1054, 1078, 1114, 1145
BseJI GATNNNNATC 2 cut(s) 190, 1891
BseLI CCNNNNNNNGG 2 cut(s) 256, 305
BseMII CTCAG 4 cut(s) 111, 845, 1740, 1794
BseNI ACTGG 5 cut(s) 250, 1058, 1433, 1630, 1924
BseRI GAGGAG 1 cut(s) 553
BseSI GKGCMC 1 cut(s) 265
BseXI GCAGC 9 cut(s) 142, 631, 1192, 1339, 1656, 1732, 1891, 1913, 2053
BseYI CCCAGC 1 cut(s) 1630
BshFI GGCC 4 cut(s) 375, 884, 906, 1293
BshNI GGYRCC 1 cut(s) 260
BsiHKAI GWGCWC 2 cut(s) 118, 832
BsiHKCI CYCGRG 1 cut(s) 14
BsiSI CCGG 1 cut(s) 1295
BslFI GGGAC 1 cut(s) 1620
BslI CCNNNNNNNGG 2 cut(s) 256, 305
BsmAI GTCTC 3 cut(s) 324, 415, 1744
BsmFI GGGAC 1 cut(s) 1620
BsnI GGCC 4 cut(s) 375, 884, 906, 1293
Bso31I GGTCTC 1 cut(s) 1744
BsoBI CYCGRG 1 cut(s) 14
Bsp1286I GDGCHC 4 cut(s) 118, 265, 832, 1949
Bsp1407I TGTACA 3 cut(s) 102, 179, 895
Bsp143I GATC 5 cut(s) 133, 629, 821, 1886, 2017
Bsp1720I GCTNAGC 1 cut(s) 1749
Bsp19I CCATGG 1 cut(s) 1156
BspACI CCGC 5 cut(s) 47, 153, 1070, 1280, 2046
BspANI GGCC 4 cut(s) 375, 884, 906, 1293
BspCNI CTCAG 4 cut(s) 112, 844, 1741, 1795
BspLI GGNNCC 6 cut(s) 262, 1635, 1636, 1858, 2019, 2050
BspMAI CTGCAG 1 cut(s) 1210
BspMI ACCTGC 4 cut(s) 72, 1062, 1575, 1744
BspPI GGATC 5 cut(s) 637, 829, 1894, 2012, 2025
BspT107I GGYRCC 1 cut(s) 260
BspTNI GGTCTC 1 cut(s) 1744
BsrGI TGTACA 3 cut(s) 102, 179, 895
BsrI ACTGG 5 cut(s) 250, 1058, 1433, 1630, 1924
BssECI CCNNGG 4 cut(s) 987, 1156, 1941, 1983
BssMI GATC 5 cut(s) 133, 629, 821, 1886, 2017
BssNAI GTATAC 2 cut(s) 289, 384
BssT1I CCWWGG 3 cut(s) 987, 1156, 1983
Bst1107I GTATAC 2 cut(s) 289, 384
Bst2UI CCWGG 3 cut(s) 198, 351, 724
Bst4CI ACNGT 9 cut(s) 179, 218, 318, 381, 1394, 1556, 1738, 1942, 1999
Bst6I CTCTTC 2 cut(s) 418, 1569
BstAUI TGTACA 3 cut(s) 102, 179, 895
BstC8I GCNNGC 5 cut(s) 21, 638, 642, 1646, 1881
BstDEI CTNAG 5 cut(s) 120, 831, 1749, 1803, 1846
BstDSI CCRYGG 2 cut(s) 1156, 1941
BstEII GGTNACC 1 cut(s) 1693
BstF5I GGATG 6 cut(s) 387, 719, 1054, 1078, 1114, 1145
BstKTI GATC 5 cut(s) 136, 632, 824, 1889, 2020
BstMAI GTCTC 3 cut(s) 324, 415, 1744
BstMBI GATC 5 cut(s) 133, 629, 821, 1886, 2017
BstMWI GCNNNNNNNGC 3 cut(s) 372, 974, 1820
BstNI CCWGG 3 cut(s) 198, 351, 724
BstNSI RCATGY 4 cut(s) 23, 145, 644, 701
BstPAI GACNNNNGTC 1 cut(s) 1736
BstPI GGTNACC 1 cut(s) 1693
BstSCI CCNGG 4 cut(s) 196, 349, 722, 1293
BstSFI CTRYAG 1 cut(s) 1206
BstSLI GKGCMC 1 cut(s) 265
BstV1I GCAGC 9 cut(s) 142, 631, 1192, 1339, 1656, 1732, 1891, 1913, 2053
BstV2I GAAGAC 2 cut(s) 1523, 1557
BstX2I RGATCY 2 cut(s) 821, 2017
BstYI RGATCY 2 cut(s) 821, 2017
BstZ17I GTATAC 2 cut(s) 289, 384
BsuI GTATCC 1 cut(s) 1444
BsuRI GGCC 4 cut(s) 375, 884, 906, 1293
BtgI CCRYGG 2 cut(s) 1156, 1941
BtsCI GGATG 6 cut(s) 387, 719, 1054, 1078, 1114, 1145
BtsIMutI CAGTG 3 cut(s) 1440, 1800, 1917
BveI ACCTGC 4 cut(s) 72, 1062, 1575, 1744
Cac8I GCNNGC 5 cut(s) 21, 638, 642, 1646, 1881
CaiI CAGNNNCTG 3 cut(s) 545, 1904, 1907
Cfr13I GGNCC 6 cut(s) 211, 239, 882, 935, 1292, 1634
CseI GACGC 1 cut(s) 1114
CsiI ACCWGGT 2 cut(s) 196, 349
Csp6I GTAC 6 cut(s) 103, 180, 253, 896, 1029, 1543
CviQI GTAC 6 cut(s) 103, 180, 253, 896, 1029, 1543
DdeI CTNAG 5 cut(s) 120, 831, 1749, 1803, 1846
DpnI GATC 5 cut(s) 135, 631, 823, 1888, 2019
DpnII GATC 5 cut(s) 133, 629, 821, 1886, 2017
DraI TTTAAA 1 cut(s) 579
DraIII CACNNNGTG 1 cut(s) 200
EaeI YGGCCR 1 cut(s) 373
Eam1104I CTCTTC 2 cut(s) 418, 1569
EarI CTCTTC 2 cut(s) 418, 1569
Ecl136II GAGCTC 1 cut(s) 116
Eco130I CCWWGG 3 cut(s) 987, 1156, 1983
Eco24I GRGCYC 2 cut(s) 118, 1949
Eco31I GGTCTC 1 cut(s) 1744
Eco32I GATATC 1 cut(s) 247
Eco47I GGWCC 4 cut(s) 211, 239, 935, 1634
Eco53kI GAGCTC 1 cut(s) 116
Eco57I CTGAAG 1 cut(s) 1881
Eco88I CYCGRG 1 cut(s) 14
Eco91I GGTNACC 1 cut(s) 1693
EcoICRI GAGCTC 1 cut(s) 116
EcoO109I RGGNCCY 2 cut(s) 882, 1634
EcoO65I GGTNACC 1 cut(s) 1693
EcoRII CCWGG 3 cut(s) 196, 349, 722
EcoRV GATATC 1 cut(s) 247
EcoT14I CCWWGG 3 cut(s) 987, 1156, 1983
EcoT38I GRGCYC 2 cut(s) 118, 1949
ErhI CCWWGG 3 cut(s) 987, 1156, 1983
FalI AAGNNNNNCTT 4 cut(s) 265, 297, 1463, 1495
FaqI GGGAC 1 cut(s) 1620
FauI CCCGC 1 cut(s) 160
FauNDI CATATG 1 cut(s) 1183
FbaI TGATCA 1 cut(s) 133
FblI GTMKAC 3 cut(s) 288, 383, 1841
FokI GGATG 6 cut(s) 374, 706, 1061, 1085, 1121, 1132
FriOI GRGCYC 2 cut(s) 118, 1949
GsaI CCCAGC 1 cut(s) 1634
GsuI CTGGAG 1 cut(s) 567
HaeIII GGCC 4 cut(s) 375, 884, 906, 1293
HapII CCGG 1 cut(s) 1295
HgaI GACGC 1 cut(s) 1114
HincII GTYRAC 2 cut(s) 1063, 1300
HindII GTYRAC 2 cut(s) 1063, 1300
HindIII AAGCTT 2 cut(s) 854, 1600
HinfI GANTC 8 cut(s) 43, 191, 470, 589, 942, 1486, 1504, 1979
HpaII CCGG 1 cut(s) 1295
HphI GGTGA 8 cut(s) 186, 212, 408, 456, 932, 1676, 1687, 1930
Hpy166II GTNNAC 7 cut(s) 255, 289, 384, 1063, 1117, 1300, 1842
Hpy188I TCNGA 6 cut(s) 402, 585, 610, 1491, 1560, 1598
Hpy188III TCNNGA 7 cut(s) 14, 119, 242, 546, 1501, 1789, 2015
Hpy8I GTNNAC 7 cut(s) 255, 289, 384, 1063, 1117, 1300, 1842
Hpy99I CGWCG 1 cut(s) 800
HpyAV CCTTC 5 cut(s) 429, 509, 605, 1804, 2035
HpyCH4III ACNGT 9 cut(s) 179, 218, 318, 381, 1394, 1556, 1738, 1942, 1999
HpyCH4V TGCA 9 cut(s) 314, 719, 1007, 1076, 1181, 1208, 1256, 1570, 1715
HpyF10VI GCNNNNNNNGC 3 cut(s) 372, 974, 1820
HpyF3I CTNAG 5 cut(s) 120, 831, 1749, 1803, 1846
KflI GGGWCCC 1 cut(s) 1634
Ksp22I TGATCA 1 cut(s) 133
Kzo9I GATC 5 cut(s) 133, 629, 821, 1886, 2017
LmnI GCTCC 5 cut(s) 113, 121, 488, 1347, 2054
Lsp1109I GCAGC 9 cut(s) 142, 631, 1192, 1339, 1656, 1732, 1891, 1913, 2053
LweI GCATC 6 cut(s) 436, 500, 728, 994, 1063, 1180
MabI ACCWGGT 2 cut(s) 196, 349
MaeIII GTNAC 7 cut(s) 496, 1435, 1621, 1693, 1909, 1936, 2028
MalI GATC 5 cut(s) 135, 631, 823, 1888, 2019
MboI GATC 5 cut(s) 133, 629, 821, 1886, 2017
MboII GAAGA 8 cut(s) 405, 657, 1199, 1225, 1528, 1562, 1586, 1887
MfeI CAATTG 1 cut(s) 1815
MflI RGATCY 2 cut(s) 821, 2017
MhlI GDGCHC 4 cut(s) 118, 265, 832, 1949
MlsI TGGCCA 1 cut(s) 375
MluCI AATT 9 cut(s) 535, 729, 775, 928, 1265, 1815, 1851, 1990, 2007
MluNI TGGCCA 1 cut(s) 375
MlyI GAGTC 1 cut(s) 464
MmeI TCCRAC 4 cut(s) 98, 704, 1788, 1981
Mox20I TGGCCA 1 cut(s) 375
MroXI GAANNNNTTC 1 cut(s) 1496
MscI TGGCCA 1 cut(s) 375
MslI CAYNNNNRTG 1 cut(s) 24
Msp20I TGGCCA 1 cut(s) 375
MspA1I CMGCKG 2 cut(s) 155, 1904
MspI CCGG 1 cut(s) 1295
MspR9I CCNGG 4 cut(s) 198, 351, 724, 1295
MunI CAATTG 1 cut(s) 1815
MvaI CCWGG 3 cut(s) 198, 351, 724
MwoI GCNNNNNNNGC 3 cut(s) 372, 974, 1820
NciI CCSGG 1 cut(s) 1295
NcoI CCATGG 1 cut(s) 1156
NdeI CATATG 1 cut(s) 1183
NdeII GATC 5 cut(s) 133, 629, 821, 1886, 2017
NlaIV GGNNCC 6 cut(s) 262, 1635, 1636, 1858, 2019, 2050
NmuCI GTSAC 3 cut(s) 1435, 1693, 1936
NspI RCATGY 4 cut(s) 23, 145, 644, 701
PaeI GCATGC 2 cut(s) 23, 644
PciI ACATGT 1 cut(s) 697
PdmI GAANNNNTTC 1 cut(s) 1496
PfeI GAWTC 7 cut(s) 43, 191, 589, 942, 1486, 1504, 1979
PleI GAGTC 1 cut(s) 464
PpsI GAGTC 1 cut(s) 464
PpuMI RGGWCCY 1 cut(s) 1634
PscI ACATGT 1 cut(s) 697
PshAI GACNNNNGTC 1 cut(s) 1736
PshBI ATTAAT 1 cut(s) 1869
Psp124BI GAGCTC 1 cut(s) 118
Psp5II RGGWCCY 1 cut(s) 1634
Psp6I CCWGG 3 cut(s) 196, 349, 722
PspEI GGTNACC 1 cut(s) 1693
PspFI CCCAGC 1 cut(s) 1630
PspGI CCWGG 3 cut(s) 196, 349, 722
PspN4I GGNNCC 6 cut(s) 262, 1635, 1636, 1858, 2019, 2050
PspPI GGNCC 6 cut(s) 211, 239, 882, 935, 1292, 1634
PspPPI RGGWCCY 1 cut(s) 1634
PstI CTGCAG 1 cut(s) 1210
PstNI CAGNNNCTG 3 cut(s) 545, 1904, 1907
PsuI RGATCY 2 cut(s) 821, 2017
PvuII CAGCTG 1 cut(s) 1904
RsaI GTAC 6 cut(s) 104, 181, 254, 897, 1030, 1544
RsaNI GTAC 6 cut(s) 103, 180, 253, 896, 1029, 1543
RseI CAYNNNNRTG 1 cut(s) 24
SacI GAGCTC 1 cut(s) 118
Sau3AI GATC 5 cut(s) 133, 629, 821, 1886, 2017
Sau96I GGNCC 6 cut(s) 211, 239, 882, 935, 1292, 1634
SchI GAGTC 1 cut(s) 464
ScrFI CCNGG 4 cut(s) 198, 351, 724, 1295
SduI GDGCHC 4 cut(s) 118, 265, 832, 1949
SexAI ACCWGGT 2 cut(s) 196, 349
SfaNI GCATC 6 cut(s) 436, 500, 728, 994, 1063, 1180
SfcI CTRYAG 1 cut(s) 1206
SinI GGWCC 4 cut(s) 211, 239, 935, 1634
SmiMI CAYNNNNRTG 1 cut(s) 24
SpeI ACTAGT 1 cut(s) 1175
SphI GCATGC 2 cut(s) 23, 644
Sse9I AATT 9 cut(s) 535, 729, 775, 928, 1265, 1815, 1851, 1990, 2007
SsiI CCGC 5 cut(s) 47, 153, 1070, 1280, 2046
SspI AATATT 1 cut(s) 1497
SstI GAGCTC 1 cut(s) 118
StyD4I CCNGG 4 cut(s) 196, 349, 722, 1293
StyI CCWWGG 3 cut(s) 987, 1156, 1983
TaaI ACNGT 9 cut(s) 179, 218, 318, 381, 1394, 1556, 1738, 1942, 1999
TaqI TCGA 3 cut(s) 566, 859, 2058
TasI AATT 9 cut(s) 535, 729, 775, 928, 1265, 1815, 1851, 1990, 2007
TatI WGTACW 5 cut(s) 102, 179, 252, 895, 1542
TauI GCSGC 1 cut(s) 2049
TfiI GAWTC 7 cut(s) 43, 191, 589, 942, 1486, 1504, 1979
TscAI CASTG 3 cut(s) 1440, 1807, 1924
TseFI GTSAC 3 cut(s) 1435, 1693, 1936
TseI GCWGC 9 cut(s) 155, 644, 1205, 1327, 1669, 1745, 1901, 1904, 2066
Tsp45I GTSAC 3 cut(s) 1435, 1693, 1936
TspDTI ATGAA 5 cut(s) 285, 602, 860, 1200, 1437
TspGWI ACGGA 1 cut(s) 1016
TspRI CASTG 3 cut(s) 1440, 1807, 1924
VpaK11BI GGWCC 4 cut(s) 211, 239, 935, 1634
VspI ATTAAT 1 cut(s) 1869
XapI RAATTY 1 cut(s) 535
XceI RCATGY 4 cut(s) 23, 145, 644, 701
XmiI GTMKAC 3 cut(s) 288, 383, 1841
XmnI GAANNNNTTC 1 cut(s) 1496
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.