Rh4BG274900

YT521-B-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0006149
Physical Location & Seq
Reverse (-)
44903438 .. 44906910
3473 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG274900.1

Sequence Viewer

Length: 2067 bp
ATGAGGGGTGGCAGTCCTTCAATCGAAATGTATAATGTTCCTGAACATGCAAATAATGACGTTTATATGATCCAAGGCATGGAACCAAATATGCATTTTACGACTCCCTTTGAACAAGTTGATGCCATGTACAACGAAGGAGCCCCCGAGTATGTAGTTGATCAGGGCATGTATTATCCTACTGCCACCAACTATGGGTACTACTGTACAGGATTTGAATCACCCGGTGAATGGGAGGACCAACGTAGGACTTTTGGTGTAGATGGTCCAGATGTCCAGTACGCGGGTGCGCAAAATGAAAGTTTGCCTTATGTATATTATACACCTGGCTATGGATATGCACAGACTTCATACAACCCATACAACCCTTACATACCTGGTGCTATGATAGGTGTTGATGGCCAACAGTATTATACCGTCCCCCCTTATCAGAATTCTGTCTCTTCACCTGCTTATGTCCCTTTTGTTGCTCAGCCGGATGTCATTCCCAACAGTTCACCTGACTCTTTGTACGATACTGGAACATCTATTAATAGACCTGGTGGAAGAGGCCTTAAATATAATTTGAATTCAGCTTCTGCAGCCTTCCCTAACACTCCTAAGCCATCCTCGAATCAGATGAGCCCCTTGACTAGGTTATTAGAAAGGCCAAGAGGCAATGTTGGACCAAGCAAGCCAGCTGTAACTCATGGCAGTGTTTCTTCTGGTCGTTTTCCAAACCCTGCTCACCAGAGTAGAAGTGCATCCGGCTCAGATGGGAAAGTTTTGCCTCATCATAATCAATTGAAGGTAGCAATCCCTGTAGGTAATGGCTTGTCTGATTTTGGATCGGGTGCACAAGGACGAGATGCTGTGGCTAAGCTTCGGCCAAAGTTCCATGTTGGCAGGGCCTTGAATGATATACATGGTAATATAGAGCCGTTGAGTGAGCAGAATTGTGGTCCTAGAGTCAATAGATTAAAAAATCAATTAGCTGTTAAAGCCTACACAACCAAGGCAGGAGATAGTAATGCGCAAGGAAATATCATTATTCGCACTGATCAGTATAACAAGGATAATCTCCCAGTTGATTATGTGCATGCAAAATTTTTTGTAATAAAATCATACAGCGAGGATGATGTGCATAAGAGTGTTAAATACAATGTCTGGTCATCCACACCGCATGGCAACAAAAAACTAAGCAGTGCTTATGAAGATGCCCAACGAATAGCTGCAGGGAACCCTGGAGGCTGTCCTATCTTCCTCTTCTTTTCGGTAAATGCAAGTGGTCAATTCTGTGGCGTCGCAGAGATGGTTGGCCCGGTTGACTTCAACAAGGATATGGACTTTTGGCAGCAAGATAAATGGAGTGGGAGCTTCCCTGTTATTTGGCACATTGTCAAAGATGTGTCGAACACCAGTGTTAGGCACATCGTATTGGAGAACAATGAGAACAAGCCGGTGACTAATAGCAGGGATACACAAGAGATCATGTATAAGAAAGGCTTGGAGATGTTGAAAATATTCAAGAATCACATGATGAAGACCTCATTGCTTGATGACTTTATGTACTATGAAGACCGTCAGAAAATCATGCAGGATGAGAGAGGCAGGTTTCTTGTTAGAAATTTTGAGACTCCATTCGTAGTAACAGCATTGGGACCCCCACGCAAGCTGAACCCTGTTCGTGAGCTGCCTCACAGCAAAGAGGAAAAAGACACCAAACCTAATGATGCAAACAACTCAGAAAAGTCTCTGGTTTCTGCATCTGAGCAGATTTCCTCAAACTTAGATGTTAAAGATGCGAGTATTAGGAGTGAAAATTCAGAGAAAAAGGCACTTGAAGCAGAAGATGATGCTGTATCTACCTTAAAAATTAGTTCGCTTACTATTGATCCAAAGCAGGTGGAGCTTGATTCTTCAGCTGGTGCTGCTACTGCTACTTCAAAAAATGTTGATGTTGTCACTGTAGGCTCAATTCCTGTTAGAGTTAATGGATTTGCTGAATCCTTGGGTACTTTAACTGTTGGAACGATCCCTCTGGATCCTAGAGCACTAAAACTCGAGAAGGGCAGTTCTCTTAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

688

Amino Acids

75.7

Weight (kDa)

6.05

Isoelectric Point (pI)

36.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 361 - 503 6.4e-49 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 457, 1873
Acc16I TGCGCA 2 cut(s) 291, 1014
Acc36I ACCTGC 3 cut(s) 457, 1581, 1873
AccB7I CCANNNNNTGG 1 cut(s) 79
AccII CGCG 1 cut(s) 284
AciI CCGC 2 cut(s) 284, 1160
AclWI GGATC 6 cut(s) 64, 835, 1868, 2008, 2018, 2031
AcoI YGGCCR 2 cut(s) 400, 866
AcsI RAATTY 5 cut(s) 433, 568, 1085, 1606, 1801
AcuI CTGAAG 1 cut(s) 1884
AcyI GRCGYC 1 cut(s) 1281
AdeI CACNNNGTG 1 cut(s) 227
AfaI GTAC 7 cut(s) 131, 200, 208, 281, 512, 1550, 1996
AfiI CCNNNNNNNGG 7 cut(s) 79, 195, 231, 283, 332, 633, 1404
AjnI CCWGG 4 cut(s) 325, 376, 538, 1222
Alw21I GWGCWC 2 cut(s) 838, 2035
Alw26I GTCTC 3 cut(s) 445, 1607, 1737
Alw44I GTGCAC 1 cut(s) 834
AlwI GGATC 6 cut(s) 64, 835, 1868, 2008, 2018, 2031
AlwNI CAGNNNCTG 1 cut(s) 578
Ama87I CYCGRG 2 cut(s) 146, 2042
AoxI GGCC 6 cut(s) 400, 550, 647, 866, 888, 1297
ApaLI GTGCAC 1 cut(s) 834
ApeKI GCWGC 5 cut(s) 581, 1211, 1333, 1672, 1910
ApoI RAATTY 5 cut(s) 433, 568, 1085, 1606, 1801
AseI ATTAAT 1 cut(s) 531
Asp700I GAANNNNTTC 1 cut(s) 1502
AspLEI GCGC 2 cut(s) 292, 1015
AspS9I GGNCC 7 cut(s) 238, 266, 665, 888, 941, 1298, 1640
AsuC2I CCSGG 2 cut(s) 225, 1301
AsuHPI GGTGA 6 cut(s) 213, 239, 438, 489, 719, 1453
AvaI CYCGRG 2 cut(s) 146, 2042
AvaII GGWCC 5 cut(s) 238, 266, 665, 941, 1640
BaeGI GKGCMC 1 cut(s) 838
BaeI ACNNNNGTAYC 2 cut(s) 190, 223
BalI TGGCCA 1 cut(s) 402
BamHI GGATCC 1 cut(s) 2023
BanII GRGCYC 2 cut(s) 145, 626
BbsI GAAGAC 2 cut(s) 1529, 1563
Bbv12I GWGCWC 2 cut(s) 838, 2035
BbvI GCAGC 5 cut(s) 593, 1198, 1345, 1659, 1897
BccI CCATC 5 cut(s) 257, 392, 613, 749, 1285
BceAI ACGGC 1 cut(s) 904
BciT130I CCWGG 4 cut(s) 327, 378, 540, 1224
BciVI GTATCC 1 cut(s) 1450
BclI TGATCA 2 cut(s) 160, 1039
BcnI CCSGG 2 cut(s) 225, 1301
BcoDI GTCTC 3 cut(s) 445, 1607, 1737
BfaI CTAG 3 cut(s) 633, 945, 2028
BfmI CTRYAG 4 cut(s) 579, 801, 1212, 1947
BfuAI ACCTGC 3 cut(s) 457, 1581, 1873
BfuI GTATCC 1 cut(s) 1450
BisI GCNGC 5 cut(s) 582, 1212, 1334, 1673, 1911
BlpI GCTNAGC 2 cut(s) 471, 858
BlsI GCNGC 5 cut(s) 583, 1213, 1335, 1674, 1912
Bme1390I CCNGG 6 cut(s) 225, 327, 378, 540, 1224, 1301
Bme18I GGWCC 5 cut(s) 238, 266, 665, 941, 1640
BmeT110I CYCGRG 2 cut(s) 146, 2042
BmgT120I GGNCC 7 cut(s) 238, 266, 665, 888, 941, 1298, 1640
BmiI GGNNCC 6 cut(s) 84, 142, 1220, 1641, 1642, 2025
BmrFI CCNGG 6 cut(s) 225, 327, 378, 540, 1224, 1301
BmrI ACTGGG 1 cut(s) 1058
BmsI GCATC 8 cut(s) 112, 752, 838, 1186, 1702, 1754, 1771, 1825
BmuI ACTGGG 1 cut(s) 1058
BpiI GAAGAC 2 cut(s) 1529, 1563
BpmI CTGGAG 1 cut(s) 1245
Bpu10I CCTNAGC 1 cut(s) 600
Bpu1102I GCTNAGC 2 cut(s) 471, 858
BpuMI CCSGG 2 cut(s) 225, 1301
BsaBI GATNNNNATC 1 cut(s) 217
BsaHI GRCGYC 1 cut(s) 1281
BsaJI CCNNGG 4 cut(s) 73, 993, 1222, 1989
Bsc4I CCNNNNNNNGG 7 cut(s) 79, 195, 231, 283, 332, 633, 1404
Bse118I RCCGGY 1 cut(s) 1438
Bse1I ACTGG 4 cut(s) 277, 523, 1064, 1398
Bse3DI GCAATG 2 cut(s) 664, 1529
Bse8I GATNNNNATC 1 cut(s) 217
BseBI CCWGG 4 cut(s) 327, 378, 540, 1224
BseDI CCNNGG 4 cut(s) 73, 993, 1222, 1989
BseGI GGATG 6 cut(s) 484, 605, 743, 1120, 1151, 1585
BseJI GATNNNNATC 1 cut(s) 217
BseLI CCNNNNNNNGG 7 cut(s) 79, 195, 231, 283, 332, 633, 1404
BseMI GCAATG 2 cut(s) 664, 1529
BseMII CTCAG 4 cut(s) 485, 765, 1737, 1740
BseNI ACTGG 4 cut(s) 277, 523, 1064, 1398
BseSI GKGCMC 1 cut(s) 838
BseXI GCAGC 5 cut(s) 593, 1198, 1345, 1659, 1897
Bsh1236I CGCG 1 cut(s) 284
BshFI GGCC 6 cut(s) 402, 552, 649, 868, 890, 1299
BsiHKAI GWGCWC 2 cut(s) 838, 2035
BsiHKCI CYCGRG 2 cut(s) 146, 2042
BsiSI CCGG 5 cut(s) 225, 476, 747, 1301, 1439
BslFI GGGAC 3 cut(s) 404, 443, 1653
BslI CCNNNNNNNGG 7 cut(s) 79, 195, 231, 283, 332, 633, 1404
BsmAI GTCTC 3 cut(s) 445, 1607, 1737
BsmFI GGGAC 3 cut(s) 404, 443, 1653
BsnI GGCC 6 cut(s) 402, 552, 649, 868, 890, 1299
BsoBI CYCGRG 2 cut(s) 146, 2042
Bsp1286I GDGCHC 4 cut(s) 145, 626, 838, 2035
Bsp1407I TGTACA 2 cut(s) 129, 206
Bsp143I GATC 8 cut(s) 69, 160, 827, 1039, 1467, 1873, 2013, 2023
Bsp1720I GCTNAGC 2 cut(s) 471, 858
BspACI CCGC 2 cut(s) 284, 1160
BspANI GGCC 6 cut(s) 402, 552, 649, 868, 890, 1299
BspCNI CTCAG 4 cut(s) 484, 764, 1736, 1741
BspFNI CGCG 1 cut(s) 284
BspLI GGNNCC 6 cut(s) 84, 142, 1220, 1641, 1642, 2025
BspMAI CTGCAG 2 cut(s) 583, 1216
BspMI ACCTGC 3 cut(s) 457, 1581, 1873
BspPI GGATC 6 cut(s) 64, 835, 1868, 2008, 2018, 2031
BsrDI GCAATG 2 cut(s) 664, 1529
BsrFI RCCGGY 1 cut(s) 1438
BsrGI TGTACA 2 cut(s) 129, 206
BsrI ACTGG 4 cut(s) 277, 523, 1064, 1398
BssAI RCCGGY 1 cut(s) 1438
BssECI CCNNGG 4 cut(s) 73, 993, 1222, 1989
BssMI GATC 8 cut(s) 69, 160, 827, 1039, 1467, 1873, 2013, 2023
BssNI GRCGYC 1 cut(s) 1281
BssT1I CCWWGG 3 cut(s) 73, 993, 1989
Bst2UI CCWGG 4 cut(s) 327, 378, 540, 1224
Bst4CI ACNGT 7 cut(s) 206, 408, 418, 494, 1562, 1948, 2005
Bst6I CTCTTC 3 cut(s) 448, 541, 1250
BstACI GRCGYC 1 cut(s) 1281
BstAUI TGTACA 2 cut(s) 129, 206
BstC8I GCNNGC 4 cut(s) 674, 678, 1080, 1652
BstDEI CTNAG 8 cut(s) 471, 600, 751, 858, 1178, 1723, 1749, 1768
BstENI CCTNNNNNAGG 1 cut(s) 631
BstF5I GGATG 6 cut(s) 484, 605, 743, 1120, 1151, 1585
BstFNI CGCG 1 cut(s) 284
BstHHI GCGC 2 cut(s) 292, 1015
BstKTI GATC 8 cut(s) 72, 163, 830, 1042, 1470, 1876, 2016, 2026
BstMAI GTCTC 3 cut(s) 445, 1607, 1737
BstMBI GATC 8 cut(s) 69, 160, 827, 1039, 1467, 1873, 2013, 2023
BstMWI GCNNNNNNNGC 6 cut(s) 581, 980, 1823, 1888, 1910, 1916
BstNI CCWGG 4 cut(s) 327, 378, 540, 1224
BstNSI RCATGY 3 cut(s) 50, 172, 1082
BstSCI CCNGG 6 cut(s) 223, 325, 376, 538, 1222, 1299
BstSFI CTRYAG 4 cut(s) 579, 801, 1212, 1947
BstSLI GKGCMC 1 cut(s) 838
BstUI CGCG 1 cut(s) 284
BstV1I GCAGC 5 cut(s) 593, 1198, 1345, 1659, 1897
BstV2I GAAGAC 2 cut(s) 1529, 1563
BstX2I RGATCY 1 cut(s) 2023
BstYI RGATCY 1 cut(s) 2023
BsuI GTATCC 1 cut(s) 1450
BsuRI GGCC 6 cut(s) 402, 552, 649, 868, 890, 1299
BtsCI GGATG 6 cut(s) 484, 605, 743, 1120, 1151, 1585
BtsI GCAGTG 2 cut(s) 700, 1189
BtsIMutI CAGTG 5 cut(s) 700, 1035, 1189, 1405, 1944
BveI ACCTGC 3 cut(s) 457, 1581, 1873
Cac8I GCNNGC 4 cut(s) 674, 678, 1080, 1652
CaiI CAGNNNCTG 1 cut(s) 578
CfoI GCGC 2 cut(s) 292, 1015
Cfr10I RCCGGY 1 cut(s) 1438
Cfr13I GGNCC 7 cut(s) 238, 266, 665, 888, 941, 1298, 1640
CseI GACGC 1 cut(s) 1270
CsiI ACCWGGT 2 cut(s) 376, 538
Csp6I GTAC 7 cut(s) 130, 199, 207, 280, 511, 1549, 1995
CspCI CAANNNNNGTGG 2 cut(s) 1866, 1901
CviQI GTAC 7 cut(s) 130, 199, 207, 280, 511, 1549, 1995
DdeI CTNAG 8 cut(s) 471, 600, 751, 858, 1178, 1723, 1749, 1768
DpnI GATC 8 cut(s) 71, 162, 829, 1041, 1469, 1875, 2015, 2025
DpnII GATC 8 cut(s) 69, 160, 827, 1039, 1467, 1873, 2013, 2023
DraIII CACNNNGTG 1 cut(s) 227
EaeI YGGCCR 2 cut(s) 400, 866
Eam1104I CTCTTC 3 cut(s) 448, 541, 1250
EarI CTCTTC 3 cut(s) 448, 541, 1250
Eco130I CCWWGG 3 cut(s) 73, 993, 1989
Eco147I AGGCCT 1 cut(s) 552
Eco24I GRGCYC 2 cut(s) 145, 626
Eco47I GGWCC 5 cut(s) 238, 266, 665, 941, 1640
Eco57I CTGAAG 1 cut(s) 1884
Eco88I CYCGRG 2 cut(s) 146, 2042
EcoNI CCTNNNNNAGG 1 cut(s) 631
EcoO109I RGGNCCY 2 cut(s) 888, 1640
EcoRI GAATTC 2 cut(s) 433, 568
EcoRII CCWGG 4 cut(s) 325, 376, 538, 1222
EcoT14I CCWWGG 3 cut(s) 73, 993, 1989
EcoT22I ATGCAT 1 cut(s) 96
EcoT38I GRGCYC 2 cut(s) 145, 626
ErhI CCWWGG 3 cut(s) 73, 993, 1989
FalI AAGNNNNNCTT 6 cut(s) 292, 324, 1171, 1203, 1469, 1501
FaqI GGGAC 3 cut(s) 404, 443, 1653
FauI CCCGC 1 cut(s) 277
FbaI TGATCA 2 cut(s) 160, 1039
Fnu4HI GCNGC 5 cut(s) 582, 1212, 1334, 1673, 1911
FokI GGATG 6 cut(s) 491, 592, 730, 1127, 1138, 1592
FriOI GRGCYC 2 cut(s) 145, 626
Fsp4HI GCNGC 5 cut(s) 582, 1212, 1334, 1673, 1911
FspBI CTAG 3 cut(s) 633, 945, 2028
FspI TGCGCA 2 cut(s) 291, 1014
GlaI GCGC 2 cut(s) 291, 1014
GluI GCNGC 5 cut(s) 582, 1212, 1334, 1673, 1911
GsuI CTGGAG 1 cut(s) 1245
HaeIII GGCC 6 cut(s) 402, 552, 649, 868, 890, 1299
HapII CCGG 5 cut(s) 225, 476, 747, 1301, 1439
HgaI GACGC 1 cut(s) 1270
HhaI GCGC 2 cut(s) 292, 1015
Hin1I GRCGYC 1 cut(s) 1281
Hin6I GCGC 2 cut(s) 290, 1013
HinP1I GCGC 2 cut(s) 290, 1013
HincII GTYRAC 1 cut(s) 1306
HindII GTYRAC 1 cut(s) 1306
HindIII AAGCTT 1 cut(s) 860
HinfI GANTC 9 cut(s) 103, 218, 503, 613, 948, 1510, 1615, 1895, 1985
HpaII CCGG 5 cut(s) 225, 476, 747, 1301, 1439
HphI GGTGA 6 cut(s) 213, 239, 438, 489, 719, 1453
Hpy166II GTNNAC 3 cut(s) 497, 836, 1306
Hpy188I TCNGA 8 cut(s) 432, 618, 754, 820, 1566, 1726, 1750, 1807
Hpy188III TCNNGA 6 cut(s) 41, 269, 1507, 1667, 2021, 2044
Hpy8I GTNNAC 3 cut(s) 497, 836, 1306
Hpy99I CGWCG 1 cut(s) 1286
HpyAV CCTTC 5 cut(s) 27, 131, 595, 781, 2041
HpyCH4III ACNGT 7 cut(s) 206, 408, 418, 494, 1562, 1948, 2005
HpyCH4IV ACGT 2 cut(s) 60, 244
HpyF10VI GCNNNNNNNGC 6 cut(s) 581, 980, 1823, 1888, 1910, 1916
HpyF3I CTNAG 8 cut(s) 471, 600, 751, 858, 1178, 1723, 1749, 1768
HpySE526I ACGT 2 cut(s) 60, 244
Hsp92I GRCGYC 1 cut(s) 1281
HspAI GCGC 2 cut(s) 290, 1013
KflI GGGWCCC 1 cut(s) 1640
Ksp22I TGATCA 2 cut(s) 160, 1039
Kzo9I GATC 8 cut(s) 69, 160, 827, 1039, 1467, 1873, 2013, 2023
LmnI GCTCC 3 cut(s) 140, 1353, 1888
Lsp1109I GCAGC 5 cut(s) 593, 1198, 1345, 1659, 1897
LweI GCATC 8 cut(s) 112, 752, 838, 1186, 1702, 1754, 1771, 1825
MabI ACCWGGT 2 cut(s) 376, 538
MaeI CTAG 3 cut(s) 633, 945, 2028
MaeII ACGT 2 cut(s) 60, 244
MaeIII GTNAC 4 cut(s) 682, 1441, 1627, 1942
MalI GATC 8 cut(s) 71, 162, 829, 1041, 1469, 1875, 2015, 2025
MboI GATC 8 cut(s) 69, 160, 827, 1039, 1467, 1873, 2013, 2023
MfeI CAATTG 1 cut(s) 782
MflI RGATCY 1 cut(s) 2023
MhlI GDGCHC 4 cut(s) 145, 626, 838, 2035
MlsI TGGCCA 1 cut(s) 402
MluNI TGGCCA 1 cut(s) 402
MlyI GAGTC 4 cut(s) 97, 497, 957, 1609
MmeI TCCRAC 2 cut(s) 643, 1987
Mox20I TGGCCA 1 cut(s) 402
Mph1103I ATGCAT 1 cut(s) 96
MroXI GAANNNNTTC 1 cut(s) 1502
MscI TGGCCA 1 cut(s) 402
MslI CAYNNNNRTG 2 cut(s) 693, 1128
Msp20I TGGCCA 1 cut(s) 402
MspA1I CMGCKG 2 cut(s) 680, 1904
MspI CCGG 5 cut(s) 225, 476, 747, 1301, 1439
MspR9I CCNGG 6 cut(s) 225, 327, 378, 540, 1224, 1301
MunI CAATTG 1 cut(s) 782
MvaI CCWGG 4 cut(s) 327, 378, 540, 1224
MvnI CGCG 1 cut(s) 284
MwoI GCNNNNNNNGC 6 cut(s) 581, 980, 1823, 1888, 1910, 1916
NciI CCSGG 2 cut(s) 225, 1301
NdeII GATC 8 cut(s) 69, 160, 827, 1039, 1467, 1873, 2013, 2023
NlaIV GGNNCC 6 cut(s) 84, 142, 1220, 1641, 1642, 2025
NmuCI GTSAC 2 cut(s) 1441, 1942
NsbI TGCGCA 2 cut(s) 291, 1014
NsiI ATGCAT 1 cut(s) 96
NspI RCATGY 3 cut(s) 50, 172, 1082
PaeI GCATGC 1 cut(s) 1082
PaeR7I CTCGAG 1 cut(s) 2042
PaqCI CACCTGC 2 cut(s) 457, 1873
PceI AGGCCT 1 cut(s) 552
PdmI GAANNNNTTC 1 cut(s) 1502
PfeI GAWTC 5 cut(s) 218, 613, 1510, 1895, 1985
PflMI CCANNNNNTGG 1 cut(s) 79
PkrI GCNGC 5 cut(s) 583, 1213, 1335, 1674, 1912
PleI GAGTC 4 cut(s) 97, 497, 956, 1609
PpsI GAGTC 4 cut(s) 97, 497, 956, 1609
PpuMI RGGWCCY 1 cut(s) 1640
PshBI ATTAAT 1 cut(s) 531
Psp5II RGGWCCY 1 cut(s) 1640
Psp6I CCWGG 4 cut(s) 325, 376, 538, 1222
PspGI CCWGG 4 cut(s) 325, 376, 538, 1222
PspN4I GGNNCC 6 cut(s) 84, 142, 1220, 1641, 1642, 2025
PspPI GGNCC 7 cut(s) 238, 266, 665, 888, 941, 1298, 1640
PspPPI RGGWCCY 1 cut(s) 1640
PstI CTGCAG 2 cut(s) 583, 1216
PstNI CAGNNNCTG 1 cut(s) 578
PsuI RGATCY 1 cut(s) 2023
PvuII CAGCTG 2 cut(s) 680, 1904
RsaI GTAC 7 cut(s) 131, 200, 208, 281, 512, 1550, 1996
RsaNI GTAC 7 cut(s) 130, 199, 207, 280, 511, 1549, 1995
RseI CAYNNNNRTG 2 cut(s) 693, 1128
SatI GCNGC 5 cut(s) 582, 1212, 1334, 1673, 1911
Sau3AI GATC 8 cut(s) 69, 160, 827, 1039, 1467, 1873, 2013, 2023
Sau96I GGNCC 7 cut(s) 238, 266, 665, 888, 941, 1298, 1640
SchI GAGTC 4 cut(s) 97, 497, 957, 1609
ScrFI CCNGG 6 cut(s) 225, 327, 378, 540, 1224, 1301
SduI GDGCHC 4 cut(s) 145, 626, 838, 2035
SexAI ACCWGGT 2 cut(s) 376, 538
SfaNI GCATC 8 cut(s) 112, 752, 838, 1186, 1702, 1754, 1771, 1825
SfcI CTRYAG 4 cut(s) 579, 801, 1212, 1947
Sfr274I CTCGAG 1 cut(s) 2042
SinI GGWCC 5 cut(s) 238, 266, 665, 941, 1640
SlaI CTCGAG 1 cut(s) 2042
SmiMI CAYNNNNRTG 2 cut(s) 693, 1128
SmlI CTYRAG 1 cut(s) 2042
SmoI CTYRAG 1 cut(s) 2042
SphI GCATGC 1 cut(s) 1082
SseBI AGGCCT 1 cut(s) 552
SsiI CCGC 2 cut(s) 284, 1160
SspI AATATT 1 cut(s) 1503
SspMI CTAG 3 cut(s) 633, 945, 2028
StuI AGGCCT 1 cut(s) 552
StyD4I CCNGG 6 cut(s) 223, 325, 376, 538, 1222, 1299
StyI CCWWGG 3 cut(s) 73, 993, 1989
TaaI ACNGT 7 cut(s) 206, 408, 418, 494, 1562, 1948, 2005
TaiI ACGT 2 cut(s) 63, 247
TaqI TCGA 4 cut(s) 24, 611, 1391, 2043
TatI WGTACW 3 cut(s) 129, 206, 1548
TfiI GAWTC 5 cut(s) 218, 613, 1510, 1895, 1985
TscAI CASTG 5 cut(s) 700, 1042, 1189, 1405, 1951
TseFI GTSAC 2 cut(s) 1441, 1942
TseI GCWGC 5 cut(s) 581, 1211, 1333, 1672, 1910
Tsp45I GTSAC 2 cut(s) 1441, 1942
TspDTI ATGAA 5 cut(s) 312, 339, 1206, 1535, 1569
TspRI CASTG 5 cut(s) 700, 1042, 1189, 1405, 1951
Van91I CCANNNNNTGG 1 cut(s) 79
VneI GTGCAC 1 cut(s) 834
VpaK11BI GGWCC 5 cut(s) 238, 266, 665, 941, 1640
VspI ATTAAT 1 cut(s) 531
XagI CCTNNNNNAGG 1 cut(s) 631
XapI RAATTY 5 cut(s) 433, 568, 1085, 1606, 1801
XceI RCATGY 3 cut(s) 50, 172, 1082
XhoI CTCGAG 1 cut(s) 2042
XmnI GAANNNNTTC 1 cut(s) 1502
XspI CTAG 3 cut(s) 633, 945, 2028
Zsp2I ATGCAT 1 cut(s) 96
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.