RLG00000007290

YT521-B-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0006149
Physical Location & Seq
Forward (+)
15387749 .. 15392028
4280 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007290

Sequence Viewer

Length: 2106 bp
ATGCTTTTTTCTTCTTCTTGGGGTGGCAGTCCTTCAATCGAAATGTATAATGTTCCTGAACATGCAAATAATGACGTTTATATGATCCAAGGCATGGAACCAAATATGCATTTTACGACTCCCTTTGAACAAGTTGATGCCATGTACAACGAAGGAGCCTCCGAGTATGTAGTTGATCAGGGCATGTATTATCCTACTGCCACCAACTATGGGTACTACTGTACAGGATTTGAATCACCCGGTGAATGGGAGGACCAACGTAGGACTTTTGGTGTAGATGGTCCGGATGTCCAGTACACGGGTGCGCAAAATGAAAGTTTGCCTTATGTATATTATACACCTGGCTATGGATATGCACAGACATCATACAACCCATACAACCCTTACATTCCTGGTGCTATGATAGGTGTTGATGGCCAACAGTATTATACCGTCCCCCCTTATCAGAATTCTGTCTCTTCACCTGCTTATGTCCCTTTTGTTGCTCAGCCGGATGTCATTCCCAACAGTTCACCTGACTCTTTGTACGATACTGGAACATCTATTAATAGACCTGGTGGAAGAGGCCTTAAATATAATTTGAATTCAGCTTCTGGAGCCTTCCCTAACACTCCTAAGCCATCCTCGAATCAGATGAGCCCCTTGACTCGGTTATTAGAAAGGCCAAGAGGCAATGTTGGACCAAGCAAGCCAGCTGTAACTCATGGCAGTGTTTCTTCTGGTCGTTTTCCAAACCCTGCTCACCAGAGTAGAAGTGCATCCGGCTCAGTTCCAGCCGTGGATAACCTTTCAAATGGGAAAGTATTGCCTCATCATAATCAATTGAAGGTAGCAATCCCTGTAGGTAATGGCTTGTCTGATTTTGGATCGGGTGCACAAGGACGAGATGCTGTGGCTAAGCTTCGGCCAAAGTTCCATGTTGGCAGGGCCTTGAATGATATACATGGTAATATAGAGCCGTTGAGTGAGCAGAATTGTGGTCCTAGAGGCAATAGATTAAAAAATCAATTAGCTGTTAAAGCCTACACAACCAAGGCAGGAGATAGTAATGCTCAAGGAAATATCATTATTCGCACTGATCAGTATAACAAGGATAATCTCCCAGTTGATTATGTGCACGCAAAATTTTTTGTAATAAAATCATACAGCGAGGATGATGTGCATAAGAGTGTTAAATACAATGTCTGGTCATCCACACCGCATGGCAACAAAAAACTAAGCAGTGCTTATGAAGATGCCCAACGAATAGCTGCAGGGAACCCTGGAGGCTGTCCTATCTTCCTCTTCTTTTCGGTAAATGCAAGTGGTCAATTCTGTGGCGTTGCAGAGATGGTTGGCCCGGTTGACTTCAACAAGGATATGGACTTTTGGCAGCAAGATAAATGGAGTGGGAGCTTCCCTGTTATTTGGCACATTGTCAAAGATGTGCCGAACACCAGTGTTAGGCACATCGTATTGGAGAACAATGAGAACAAGCCGGTGACTAATAGCAGGGATACACAAGAGATCATGTATAAGAAAGGCTTGGAGATGTTGAAAATATTCAAGAATCACACGATGAAGACCTCATTGCTTGACGACTTTATGTACTATGAAGACCGTCAGAAAATCATGCAGGATGAGAGAGGCAGGTTTCTTGTTAGAAATTTTGAGACTCCATTCTTAGTAACAGCATTGGGACCCCCACGCAAGCTGAACCCTGTTCGTGAGCTGCCTCACAGCAAAGAGGAAAAAGACACCAAACCTAATGATGCAAACAACTCAGAAAAGTCTCTGGTTTCTGCATCTGAGCAGATTTCCTCAAACTTAGATGTTAAAGATGTGAGTATTAGGAGTGAAAATTCAGAGAAAAAGGCACTTGAAGCAGAAGATGATGCTGTATCTACCTTAAAAATTGGTTCGCTGACTATTGATCCAAAGCAGGTGGAGCTTGATTCTTCAGCTGGTGCTGCTACTGCTACTTCAAAAAACGTTGATGTTGTCACTGTAGGCTCAATTCCTGTTAGAGTTAATGGATTTGCTGAATCCTTGGGTACTTTAACAGTTGGAACGATCCCTCTGGATCCTAGAGCACTAAAACTCGAGAAGGGCAGTTCTCTTAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

702

Amino Acids

77.0

Weight (kDa)

5.97

Isoelectric Point (pI)

35.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 374 - 516 1.8e-49 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 472, 1912
Acc16I TGCGCA 1 cut(s) 306
Acc36I ACCTGC 3 cut(s) 472, 1620, 1912
AccB7I CCANNNNNTGG 1 cut(s) 94
AccIII TCCGGA 1 cut(s) 283
AciI CCGC 1 cut(s) 1199
AclI AACGTT 1 cut(s) 1971
AclWI GGATC 6 cut(s) 79, 874, 1907, 2047, 2057, 2070
AcoI YGGCCR 2 cut(s) 415, 905
AcsI RAATTY 5 cut(s) 448, 583, 1124, 1645, 1840
AcuI CTGAAG 1 cut(s) 1923
AdeI CACNNNGTG 1 cut(s) 242
AfaI GTAC 7 cut(s) 146, 215, 223, 296, 527, 1589, 2035
AfiI CCNNNNNNNGG 7 cut(s) 94, 210, 246, 298, 347, 648, 1443
AjnI CCWGG 4 cut(s) 340, 391, 553, 1261
Alw21I GWGCWC 3 cut(s) 877, 1119, 2074
Alw26I GTCTC 3 cut(s) 460, 1646, 1776
Alw44I GTGCAC 2 cut(s) 873, 1115
AlwI GGATC 6 cut(s) 79, 874, 1907, 2047, 2057, 2070
AlwNI CAGNNNCTG 1 cut(s) 593
Ama87I CYCGRG 1 cut(s) 2081
Aor13HI TCCGGA 1 cut(s) 283
AoxI GGCC 6 cut(s) 415, 565, 662, 905, 927, 1336
ApaLI GTGCAC 2 cut(s) 873, 1115
ApeKI GCWGC 4 cut(s) 1250, 1372, 1711, 1949
ApoI RAATTY 5 cut(s) 448, 583, 1124, 1645, 1840
AseI ATTAAT 1 cut(s) 546
Asp700I GAANNNNTTC 1 cut(s) 1541
AspLEI GCGC 1 cut(s) 307
AspS9I GGNCC 7 cut(s) 253, 281, 680, 927, 980, 1337, 1679
AsuC2I CCSGG 2 cut(s) 240, 1340
AsuHPI GGTGA 6 cut(s) 228, 254, 453, 504, 734, 1492
AvaI CYCGRG 1 cut(s) 2081
AvaII GGWCC 5 cut(s) 253, 281, 680, 980, 1679
BaeGI GKGCMC 2 cut(s) 877, 1119
BaeI ACNNNNGTAYC 2 cut(s) 205, 238
BalI TGGCCA 1 cut(s) 417
BamHI GGATCC 1 cut(s) 2062
BanII GRGCYC 1 cut(s) 641
BbsI GAAGAC 2 cut(s) 1568, 1602
Bbv12I GWGCWC 3 cut(s) 877, 1119, 2074
BbvI GCAGC 4 cut(s) 1237, 1384, 1698, 1936
BccI CCATC 4 cut(s) 272, 407, 628, 1324
BceAI ACGGC 2 cut(s) 761, 943
BciT130I CCWGG 4 cut(s) 342, 393, 555, 1263
BciVI GTATCC 1 cut(s) 1489
BclI TGATCA 2 cut(s) 175, 1078
BcnI CCSGG 2 cut(s) 240, 1340
BcoDI GTCTC 3 cut(s) 460, 1646, 1776
BfaI CTAG 2 cut(s) 984, 2067
BfmI CTRYAG 3 cut(s) 840, 1251, 1986
BfuAI ACCTGC 3 cut(s) 472, 1620, 1912
BfuI GTATCC 1 cut(s) 1489
BisI GCNGC 4 cut(s) 1251, 1373, 1712, 1950
BlpI GCTNAGC 2 cut(s) 486, 897
BlsI GCNGC 4 cut(s) 1252, 1374, 1713, 1951
Bme1390I CCNGG 6 cut(s) 240, 342, 393, 555, 1263, 1340
Bme18I GGWCC 5 cut(s) 253, 281, 680, 980, 1679
BmeT110I CYCGRG 1 cut(s) 2081
BmgT120I GGNCC 7 cut(s) 253, 281, 680, 927, 980, 1337, 1679
BmiI GGNNCC 7 cut(s) 99, 157, 598, 1259, 1680, 1681, 2064
BmrFI CCNGG 6 cut(s) 240, 342, 393, 555, 1263, 1340
BmrI ACTGGG 1 cut(s) 1097
BmsI GCATC 7 cut(s) 127, 767, 877, 1225, 1741, 1793, 1864
BmuI ACTGGG 1 cut(s) 1097
BpiI GAAGAC 2 cut(s) 1568, 1602
BpmI CTGGAG 2 cut(s) 615, 1284
Bpu10I CCTNAGC 1 cut(s) 615
Bpu1102I GCTNAGC 2 cut(s) 486, 897
BpuEI CTTGAG 1 cut(s) 1038
BpuMI CCSGG 2 cut(s) 240, 1340
BsaBI GATNNNNATC 1 cut(s) 232
BsaJI CCNNGG 5 cut(s) 88, 777, 1032, 1261, 2028
BsaWI WCCGGW 1 cut(s) 283
Bsc4I CCNNNNNNNGG 7 cut(s) 94, 210, 246, 298, 347, 648, 1443
Bse118I RCCGGY 1 cut(s) 1477
Bse1I ACTGG 4 cut(s) 292, 538, 1103, 1437
Bse3DI GCAATG 2 cut(s) 679, 1568
Bse8I GATNNNNATC 1 cut(s) 232
BseAI TCCGGA 1 cut(s) 283
BseBI CCWGG 4 cut(s) 342, 393, 555, 1263
BseDI CCNNGG 5 cut(s) 88, 777, 1032, 1261, 2028
BseGI GGATG 7 cut(s) 292, 499, 620, 758, 1159, 1190, 1624
BseJI GATNNNNATC 1 cut(s) 232
BseLI CCNNNNNNNGG 7 cut(s) 94, 210, 246, 298, 347, 648, 1443
BseMI GCAATG 2 cut(s) 679, 1568
BseMII CTCAG 4 cut(s) 500, 780, 1776, 1779
BseNI ACTGG 4 cut(s) 292, 538, 1103, 1437
BseSI GKGCMC 2 cut(s) 877, 1119
BseXI GCAGC 4 cut(s) 1237, 1384, 1698, 1936
BshFI GGCC 6 cut(s) 417, 567, 664, 907, 929, 1338
BsiHKAI GWGCWC 3 cut(s) 877, 1119, 2074
BsiHKCI CYCGRG 1 cut(s) 2081
BsiSI CCGG 6 cut(s) 240, 284, 491, 762, 1340, 1478
BslFI GGGAC 3 cut(s) 419, 458, 1692
BslI CCNNNNNNNGG 7 cut(s) 94, 210, 246, 298, 347, 648, 1443
BsmAI GTCTC 3 cut(s) 460, 1646, 1776
BsmFI GGGAC 3 cut(s) 419, 458, 1692
BsnI GGCC 6 cut(s) 417, 567, 664, 907, 929, 1338
BsoBI CYCGRG 1 cut(s) 2081
Bsp1286I GDGCHC 4 cut(s) 641, 877, 1119, 2074
Bsp13I TCCGGA 1 cut(s) 283
Bsp1407I TGTACA 2 cut(s) 144, 221
Bsp143I GATC 8 cut(s) 84, 175, 866, 1078, 1506, 1912, 2052, 2062
Bsp1720I GCTNAGC 2 cut(s) 486, 897
BspACI CCGC 1 cut(s) 1199
BspANI GGCC 6 cut(s) 417, 567, 664, 907, 929, 1338
BspCNI CTCAG 4 cut(s) 499, 779, 1775, 1780
BspEI TCCGGA 1 cut(s) 283
BspLI GGNNCC 7 cut(s) 99, 157, 598, 1259, 1680, 1681, 2064
BspMAI CTGCAG 1 cut(s) 1255
BspMI ACCTGC 3 cut(s) 472, 1620, 1912
BspPI GGATC 6 cut(s) 79, 874, 1907, 2047, 2057, 2070
BsrDI GCAATG 2 cut(s) 679, 1568
BsrFI RCCGGY 1 cut(s) 1477
BsrGI TGTACA 2 cut(s) 144, 221
BsrI ACTGG 4 cut(s) 292, 538, 1103, 1437
BssAI RCCGGY 1 cut(s) 1477
BssECI CCNNGG 5 cut(s) 88, 777, 1032, 1261, 2028
BssMI GATC 8 cut(s) 84, 175, 866, 1078, 1506, 1912, 2052, 2062
BssT1I CCWWGG 3 cut(s) 88, 1032, 2028
Bst2UI CCWGG 4 cut(s) 342, 393, 555, 1263
Bst4CI ACNGT 7 cut(s) 221, 423, 433, 509, 1601, 1987, 2044
Bst6I CTCTTC 3 cut(s) 463, 556, 1289
BstAUI TGTACA 2 cut(s) 144, 221
BstC8I GCNNGC 4 cut(s) 689, 693, 1119, 1691
BstDEI CTNAG 9 cut(s) 486, 615, 766, 897, 1217, 1663, 1762, 1788, 1807
BstDSI CCRYGG 1 cut(s) 777
BstF5I GGATG 7 cut(s) 292, 499, 620, 758, 1159, 1190, 1624
BstHHI GCGC 1 cut(s) 307
BstKTI GATC 8 cut(s) 87, 178, 869, 1081, 1509, 1915, 2055, 2065
BstMAI GTCTC 3 cut(s) 460, 1646, 1776
BstMBI GATC 8 cut(s) 84, 175, 866, 1078, 1506, 1912, 2052, 2062
BstMWI GCNNNNNNNGC 6 cut(s) 596, 1019, 1862, 1927, 1949, 1955
BstNI CCWGG 4 cut(s) 342, 393, 555, 1263
BstNSI RCATGY 2 cut(s) 65, 187
BstSCI CCNGG 6 cut(s) 238, 340, 391, 553, 1261, 1338
BstSFI CTRYAG 3 cut(s) 840, 1251, 1986
BstSLI GKGCMC 2 cut(s) 877, 1119
BstV1I GCAGC 4 cut(s) 1237, 1384, 1698, 1936
BstV2I GAAGAC 2 cut(s) 1568, 1602
BstX2I RGATCY 1 cut(s) 2062
BstYI RGATCY 1 cut(s) 2062
BsuI GTATCC 1 cut(s) 1489
BsuRI GGCC 6 cut(s) 417, 567, 664, 907, 929, 1338
BtgI CCRYGG 1 cut(s) 777
BtsCI GGATG 7 cut(s) 292, 499, 620, 758, 1159, 1190, 1624
BtsI GCAGTG 2 cut(s) 715, 1228
BtsIMutI CAGTG 5 cut(s) 715, 1074, 1228, 1444, 1983
BveI ACCTGC 3 cut(s) 472, 1620, 1912
Cac8I GCNNGC 4 cut(s) 689, 693, 1119, 1691
CaiI CAGNNNCTG 1 cut(s) 593
CfoI GCGC 1 cut(s) 307
Cfr10I RCCGGY 1 cut(s) 1477
Cfr13I GGNCC 7 cut(s) 253, 281, 680, 927, 980, 1337, 1679
CsiI ACCWGGT 1 cut(s) 553
Csp6I GTAC 7 cut(s) 145, 214, 222, 295, 526, 1588, 2034
CspCI CAANNNNNGTGG 2 cut(s) 1905, 1940
CviQI GTAC 7 cut(s) 145, 214, 222, 295, 526, 1588, 2034
DdeI CTNAG 9 cut(s) 486, 615, 766, 897, 1217, 1663, 1762, 1788, 1807
DpnI GATC 8 cut(s) 86, 177, 868, 1080, 1508, 1914, 2054, 2064
DpnII GATC 8 cut(s) 84, 175, 866, 1078, 1506, 1912, 2052, 2062
DraIII CACNNNGTG 1 cut(s) 242
EaeI YGGCCR 2 cut(s) 415, 905
Eam1104I CTCTTC 3 cut(s) 463, 556, 1289
EarI CTCTTC 3 cut(s) 463, 556, 1289
Eco130I CCWWGG 3 cut(s) 88, 1032, 2028
Eco147I AGGCCT 1 cut(s) 567
Eco24I GRGCYC 1 cut(s) 641
Eco47I GGWCC 5 cut(s) 253, 281, 680, 980, 1679
Eco57I CTGAAG 1 cut(s) 1923
Eco88I CYCGRG 1 cut(s) 2081
EcoO109I RGGNCCY 2 cut(s) 927, 1679
EcoRI GAATTC 2 cut(s) 448, 583
EcoRII CCWGG 4 cut(s) 340, 391, 553, 1261
EcoT14I CCWWGG 3 cut(s) 88, 1032, 2028
EcoT22I ATGCAT 1 cut(s) 111
EcoT38I GRGCYC 1 cut(s) 641
ErhI CCWWGG 3 cut(s) 88, 1032, 2028
FalI AAGNNNNNCTT 6 cut(s) 307, 339, 1210, 1242, 1508, 1540
FaqI GGGAC 3 cut(s) 419, 458, 1692
FbaI TGATCA 2 cut(s) 175, 1078
Fnu4HI GCNGC 4 cut(s) 1251, 1373, 1712, 1950
FokI GGATG 7 cut(s) 299, 506, 607, 745, 1166, 1177, 1631
FriOI GRGCYC 1 cut(s) 641
Fsp4HI GCNGC 4 cut(s) 1251, 1373, 1712, 1950
FspBI CTAG 2 cut(s) 984, 2067
FspI TGCGCA 1 cut(s) 306
GlaI GCGC 1 cut(s) 306
GluI GCNGC 4 cut(s) 1251, 1373, 1712, 1950
GsuI CTGGAG 2 cut(s) 615, 1284
HaeIII GGCC 6 cut(s) 417, 567, 664, 907, 929, 1338
HapII CCGG 6 cut(s) 240, 284, 491, 762, 1340, 1478
HhaI GCGC 1 cut(s) 307
Hin6I GCGC 1 cut(s) 305
HinP1I GCGC 1 cut(s) 305
HincII GTYRAC 1 cut(s) 1345
HindII GTYRAC 1 cut(s) 1345
HindIII AAGCTT 1 cut(s) 899
HinfI GANTC 9 cut(s) 118, 233, 518, 628, 646, 1549, 1654, 1934, 2024
HpaII CCGG 6 cut(s) 240, 284, 491, 762, 1340, 1478
HphI GGTGA 6 cut(s) 228, 254, 453, 504, 734, 1492
Hpy166II GTNNAC 5 cut(s) 297, 512, 875, 1117, 1345
Hpy188I TCNGA 8 cut(s) 163, 447, 633, 859, 1605, 1765, 1789, 1846
Hpy188III TCNNGA 7 cut(s) 56, 284, 594, 1546, 1706, 2060, 2083
Hpy8I GTNNAC 5 cut(s) 297, 512, 875, 1117, 1345
HpyAV CCTTC 5 cut(s) 42, 146, 610, 820, 2080
HpyCH4III ACNGT 7 cut(s) 221, 423, 433, 509, 1601, 1987, 2044
HpyCH4IV ACGT 3 cut(s) 75, 259, 1971
HpyF10VI GCNNNNNNNGC 6 cut(s) 596, 1019, 1862, 1927, 1949, 1955
HpyF3I CTNAG 9 cut(s) 486, 615, 766, 897, 1217, 1663, 1762, 1788, 1807
HpySE526I ACGT 3 cut(s) 75, 259, 1971
HspAI GCGC 1 cut(s) 305
KflI GGGWCCC 1 cut(s) 1679
Kpn2I TCCGGA 1 cut(s) 283
Ksp22I TGATCA 2 cut(s) 175, 1078
Kzo9I GATC 8 cut(s) 84, 175, 866, 1078, 1506, 1912, 2052, 2062
LmnI GCTCC 4 cut(s) 155, 596, 1392, 1927
Lsp1109I GCAGC 4 cut(s) 1237, 1384, 1698, 1936
LweI GCATC 7 cut(s) 127, 767, 877, 1225, 1741, 1793, 1864
MabI ACCWGGT 1 cut(s) 553
MaeI CTAG 2 cut(s) 984, 2067
MaeII ACGT 3 cut(s) 75, 259, 1971
MaeIII GTNAC 4 cut(s) 697, 1480, 1666, 1981
MalI GATC 8 cut(s) 86, 177, 868, 1080, 1508, 1914, 2054, 2064
MboI GATC 8 cut(s) 84, 175, 866, 1078, 1506, 1912, 2052, 2062
MfeI CAATTG 1 cut(s) 821
MflI RGATCY 1 cut(s) 2062
MhlI GDGCHC 4 cut(s) 641, 877, 1119, 2074
MlsI TGGCCA 1 cut(s) 417
MluNI TGGCCA 1 cut(s) 417
MlyI GAGTC 4 cut(s) 112, 512, 640, 1648
MmeI TCCRAC 2 cut(s) 658, 2026
Mox20I TGGCCA 1 cut(s) 417
Mph1103I ATGCAT 1 cut(s) 111
MroI TCCGGA 1 cut(s) 283
MroXI GAANNNNTTC 1 cut(s) 1541
MscI TGGCCA 1 cut(s) 417
MslI CAYNNNNRTG 2 cut(s) 708, 1167
Msp20I TGGCCA 1 cut(s) 417
MspA1I CMGCKG 2 cut(s) 695, 1943
MspI CCGG 6 cut(s) 240, 284, 491, 762, 1340, 1478
MspR9I CCNGG 6 cut(s) 240, 342, 393, 555, 1263, 1340
MunI CAATTG 1 cut(s) 821
MvaI CCWGG 4 cut(s) 342, 393, 555, 1263
MwoI GCNNNNNNNGC 6 cut(s) 596, 1019, 1862, 1927, 1949, 1955
NciI CCSGG 2 cut(s) 240, 1340
NdeII GATC 8 cut(s) 84, 175, 866, 1078, 1506, 1912, 2052, 2062
NlaIV GGNNCC 7 cut(s) 99, 157, 598, 1259, 1680, 1681, 2064
NmuCI GTSAC 2 cut(s) 1480, 1981
NsbI TGCGCA 1 cut(s) 306
NsiI ATGCAT 1 cut(s) 111
NspI RCATGY 2 cut(s) 65, 187
PaeR7I CTCGAG 1 cut(s) 2081
PaqCI CACCTGC 2 cut(s) 472, 1912
PceI AGGCCT 1 cut(s) 567
PdmI GAANNNNTTC 1 cut(s) 1541
PfeI GAWTC 5 cut(s) 233, 628, 1549, 1934, 2024
PflMI CCANNNNNTGG 1 cut(s) 94
PkrI GCNGC 4 cut(s) 1252, 1374, 1713, 1951
PleI GAGTC 4 cut(s) 112, 512, 640, 1648
PpsI GAGTC 4 cut(s) 112, 512, 640, 1648
PpuMI RGGWCCY 1 cut(s) 1679
PshBI ATTAAT 1 cut(s) 546
Psp1406I AACGTT 1 cut(s) 1971
Psp5II RGGWCCY 1 cut(s) 1679
Psp6I CCWGG 4 cut(s) 340, 391, 553, 1261
PspGI CCWGG 4 cut(s) 340, 391, 553, 1261
PspN4I GGNNCC 7 cut(s) 99, 157, 598, 1259, 1680, 1681, 2064
PspPI GGNCC 7 cut(s) 253, 281, 680, 927, 980, 1337, 1679
PspPPI RGGWCCY 1 cut(s) 1679
PstI CTGCAG 1 cut(s) 1255
PstNI CAGNNNCTG 1 cut(s) 593
PsuI RGATCY 1 cut(s) 2062
PvuII CAGCTG 2 cut(s) 695, 1943
RsaI GTAC 7 cut(s) 146, 215, 223, 296, 527, 1589, 2035
RsaNI GTAC 7 cut(s) 145, 214, 222, 295, 526, 1588, 2034
RseI CAYNNNNRTG 2 cut(s) 708, 1167
SatI GCNGC 4 cut(s) 1251, 1373, 1712, 1950
Sau3AI GATC 8 cut(s) 84, 175, 866, 1078, 1506, 1912, 2052, 2062
Sau96I GGNCC 7 cut(s) 253, 281, 680, 927, 980, 1337, 1679
SchI GAGTC 4 cut(s) 112, 512, 640, 1648
ScrFI CCNGG 6 cut(s) 240, 342, 393, 555, 1263, 1340
SduI GDGCHC 4 cut(s) 641, 877, 1119, 2074
SexAI ACCWGGT 1 cut(s) 553
SfaNI GCATC 7 cut(s) 127, 767, 877, 1225, 1741, 1793, 1864
SfcI CTRYAG 3 cut(s) 840, 1251, 1986
Sfr274I CTCGAG 1 cut(s) 2081
SinI GGWCC 5 cut(s) 253, 281, 680, 980, 1679
SlaI CTCGAG 1 cut(s) 2081
SmiMI CAYNNNNRTG 2 cut(s) 708, 1167
SmlI CTYRAG 2 cut(s) 1053, 2081
SmoI CTYRAG 2 cut(s) 1053, 2081
SseBI AGGCCT 1 cut(s) 567
SsiI CCGC 1 cut(s) 1199
SspI AATATT 1 cut(s) 1542
SspMI CTAG 2 cut(s) 984, 2067
StuI AGGCCT 1 cut(s) 567
StyD4I CCNGG 6 cut(s) 238, 340, 391, 553, 1261, 1338
StyI CCWWGG 3 cut(s) 88, 1032, 2028
TaaI ACNGT 7 cut(s) 221, 423, 433, 509, 1601, 1987, 2044
TaiI ACGT 3 cut(s) 78, 262, 1974
TaqI TCGA 3 cut(s) 39, 626, 2082
TatI WGTACW 4 cut(s) 144, 221, 294, 1587
TfiI GAWTC 5 cut(s) 233, 628, 1549, 1934, 2024
TscAI CASTG 5 cut(s) 715, 1081, 1228, 1444, 1990
TseFI GTSAC 2 cut(s) 1480, 1981
TseI GCWGC 4 cut(s) 1250, 1372, 1711, 1949
Tsp45I GTSAC 2 cut(s) 1480, 1981
TspDTI ATGAA 4 cut(s) 327, 1245, 1574, 1608
TspRI CASTG 5 cut(s) 715, 1081, 1228, 1444, 1990
Van91I CCANNNNNTGG 1 cut(s) 94
VneI GTGCAC 2 cut(s) 873, 1115
VpaK11BI GGWCC 5 cut(s) 253, 281, 680, 980, 1679
VspI ATTAAT 1 cut(s) 546
XapI RAATTY 5 cut(s) 448, 583, 1124, 1645, 1840
XceI RCATGY 2 cut(s) 65, 187
XhoI CTCGAG 1 cut(s) 2081
XmnI GAANNNNTTC 1 cut(s) 1541
XspI CTAG 2 cut(s) 984, 2067
Zsp2I ATGCAT 1 cut(s) 111
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.