Hydrolase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G43600 |
| fragaria_vesca | FvH4_4g02810 |
| malus_domestica | MD13G1207900.v1.1 |
| prunus_persica | Prupe.1G031400_v2.0.a1 |
| pyrus_communis | pycom13g18000 |
| rosa_chinensis | RchiOBHm_Chr4g0390621 RchiOBHm_Chr4g0390681 |
| rosa_laevigata | RLG00000009913 |
| rosa_multiflora | Rmu_co8283127.1_g000001 Rmu_sc0000171.1_g000034 Rmu_sc0001380.1_g000018 |
| rosa_roxburghii | Rroxscaffold_1G00049440 Rroxscaffold_5G00336590 |
| rosa_rugosa | Rorug03G0331300 Rorug03G0331400 |
| rosa_samantha | Rh4AG032900 Rh4BG026800 Rh4CG036700 Rh4DG029900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 250 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 324 |
| Acc36I | ACCTGC | 1 cut(s) | 250 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 437 |
| AccI | GTMKAC | 1 cut(s) | 269 |
| AccII | CGCG | 1 cut(s) | 562 |
| AciI | CCGC | 2 cut(s) | 589, 1172 |
| AclWI | GGATC | 3 cut(s) | 682, 1163, 1176 |
| AcoI | YGGCCR | 1 cut(s) | 1284 |
| AcsI | RAATTY | 1 cut(s) | 1095 |
| AcuI | CTGAAG | 2 cut(s) | 647, 1368 |
| AfaI | GTAC | 3 cut(s) | 492, 979, 1241 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 437, 595, 778 |
| AflIII | ACRYGT | 1 cut(s) | 943 |
| AgsI | TTSAA | 3 cut(s) | 511, 851, 1153 |
| AjnI | CCWGG | 4 cut(s) | 257, 612, 1003, 1286 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 269, 301, 932, 964 |
| Alw26I | GTCTC | 3 cut(s) | 9, 162, 182 |
| AlwI | GGATC | 3 cut(s) | 682, 1163, 1176 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 677 |
| AoxI | GGCC | 4 cut(s) | 609, 769, 862, 1284 |
| ApeKI | GCWGC | 4 cut(s) | 668, 821, 911, 914 |
| ApoI | RAATTY | 1 cut(s) | 1095 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 181, 213 |
| AspLEI | GCGC | 1 cut(s) | 564 |
| AspS9I | GGNCC | 2 cut(s) | 610, 770 |
| AsuHPI | GGTGA | 1 cut(s) | 535 |
| BalI | TGGCCA | 1 cut(s) | 1286 |
| BamHI | GGATCC | 1 cut(s) | 1168 |
| BbsI | GAAGAC | 2 cut(s) | 93, 635 |
| BbvI | GCAGC | 4 cut(s) | 655, 833, 901, 923 |
| BccI | CCATC | 6 cut(s) | 256, 307, 443, 491, 635, 1294 |
| BciT130I | CCWGG | 4 cut(s) | 259, 614, 1005, 1288 |
| BciVI | GTATCC | 2 cut(s) | 229, 664 |
| BcoDI | GTCTC | 3 cut(s) | 9, 162, 182 |
| BfaI | CTAG | 6 cut(s) | 18, 467, 581, 908, 929, 1406 |
| BfmI | CTRYAG | 5 cut(s) | 396, 474, 669, 915, 1116 |
| BfuAI | ACCTGC | 1 cut(s) | 250 |
| BfuI | GTATCC | 2 cut(s) | 229, 664 |
| BglII | AGATCT | 1 cut(s) | 388 |
| BisI | GCNGC | 5 cut(s) | 589, 669, 822, 912, 915 |
| BlsI | GCNGC | 5 cut(s) | 590, 670, 823, 913, 916 |
| Bme1390I | CCNGG | 4 cut(s) | 259, 614, 1005, 1288 |
| BmgT120I | GGNCC | 2 cut(s) | 610, 770 |
| BmiI | GGNNCC | 3 cut(s) | 772, 1009, 1170 |
| BmrFI | CCNGG | 4 cut(s) | 259, 614, 1005, 1288 |
| BmsI | GCATC | 8 cut(s) | 334, 412, 655, 691, 889, 1029, 1045, 1367 |
| BpiI | GAAGAC | 2 cut(s) | 93, 635 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 101, 133 |
| BpmI | CTGGAG | 2 cut(s) | 1013, 1026 |
| Bsa29I | ATCGAT | 1 cut(s) | 1102 |
| BsaAI | YACGTR | 1 cut(s) | 946 |
| BsaJI | CCNNGG | 4 cut(s) | 258, 546, 612, 1287 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 437, 595, 778 |
| Bse118I | RCCGGY | 1 cut(s) | 869 |
| Bse1I | ACTGG | 1 cut(s) | 531 |
| Bse3DI | GCAATG | 4 cut(s) | 816, 862, 1212, 1418 |
| BseBI | CCWGG | 4 cut(s) | 259, 614, 1005, 1288 |
| BseCI | ATCGAT | 1 cut(s) | 1102 |
| BseDI | CCNNGG | 4 cut(s) | 258, 546, 612, 1287 |
| BseGI | GGATG | 4 cut(s) | 349, 1000, 1020, 1358 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 437, 595, 778 |
| BseMI | GCAATG | 4 cut(s) | 816, 862, 1212, 1418 |
| BseMII | CTCAG | 3 cut(s) | 167, 195, 264 |
| BseNI | ACTGG | 1 cut(s) | 531 |
| BseRI | GAGGAG | 5 cut(s) | 29, 32, 35, 38, 797 |
| BseXI | GCAGC | 4 cut(s) | 655, 833, 901, 923 |
| BseYI | CCCAGC | 1 cut(s) | 826 |
| Bsh1236I | CGCG | 1 cut(s) | 562 |
| BshFI | GGCC | 4 cut(s) | 611, 771, 864, 1286 |
| BshVI | ATCGAT | 1 cut(s) | 1102 |
| BsiSI | CCGG | 1 cut(s) | 870 |
| BslFI | GGGAC | 1 cut(s) | 330 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 437, 595, 778 |
| BsmAI | GTCTC | 3 cut(s) | 9, 162, 182 |
| BsmFI | GGGAC | 1 cut(s) | 330 |
| BsnI | GGCC | 4 cut(s) | 611, 771, 864, 1286 |
| Bsp143I | GATC | 5 cut(s) | 388, 521, 674, 1103, 1168 |
| BspACI | CCGC | 2 cut(s) | 589, 1172 |
| BspANI | GGCC | 4 cut(s) | 611, 771, 864, 1286 |
| BspCNI | CTCAG | 3 cut(s) | 166, 194, 265 |
| BspDI | ATCGAT | 1 cut(s) | 1102 |
| BspFNI | CGCG | 1 cut(s) | 562 |
| BspHI | TCATGA | 1 cut(s) | 1248 |
| BspLI | GGNNCC | 3 cut(s) | 772, 1009, 1170 |
| BspMAI | CTGCAG | 3 cut(s) | 400, 673, 919 |
| BspMI | ACCTGC | 1 cut(s) | 250 |
| BspPI | GGATC | 3 cut(s) | 682, 1163, 1176 |
| BspQI | GCTCTTC | 2 cut(s) | 546, 1062 |
| BsrDI | GCAATG | 4 cut(s) | 816, 862, 1212, 1418 |
| BsrFI | RCCGGY | 1 cut(s) | 869 |
| BsrI | ACTGG | 1 cut(s) | 531 |
| BssAI | RCCGGY | 1 cut(s) | 869 |
| BssECI | CCNNGG | 4 cut(s) | 258, 546, 612, 1287 |
| BssMI | GATC | 5 cut(s) | 388, 521, 674, 1103, 1168 |
| BssNAI | GTATAC | 1 cut(s) | 270 |
| Bst1107I | GTATAC | 1 cut(s) | 270 |
| Bst2UI | CCWGG | 4 cut(s) | 259, 614, 1005, 1288 |
| Bst4CI | ACNGT | 4 cut(s) | 169, 637, 973, 982 |
| Bst6I | CTCTTC | 2 cut(s) | 546, 1062 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 71, 677 |
| BstBAI | YACGTR | 1 cut(s) | 946 |
| BstC8I | GCNNGC | 2 cut(s) | 682, 1176 |
| BstDEI | CTNAG | 4 cut(s) | 153, 181, 273, 661 |
| BstF5I | GGATG | 4 cut(s) | 349, 1000, 1020, 1358 |
| BstFNI | CGCG | 1 cut(s) | 562 |
| BstHHI | GCGC | 1 cut(s) | 564 |
| BstKTI | GATC | 5 cut(s) | 391, 524, 677, 1106, 1171 |
| BstMAI | GTCTC | 3 cut(s) | 9, 162, 182 |
| BstMBI | GATC | 5 cut(s) | 388, 521, 674, 1103, 1168 |
| BstNI | CCWGG | 4 cut(s) | 259, 614, 1005, 1288 |
| BstSCI | CCNGG | 4 cut(s) | 257, 612, 1003, 1286 |
| BstSFI | CTRYAG | 5 cut(s) | 396, 474, 669, 915, 1116 |
| BstUI | CGCG | 1 cut(s) | 562 |
| BstV1I | GCAGC | 4 cut(s) | 655, 833, 901, 923 |
| BstV2I | GAAGAC | 2 cut(s) | 93, 635 |
| BstX2I | RGATCY | 3 cut(s) | 388, 674, 1168 |
| BstYI | RGATCY | 3 cut(s) | 388, 674, 1168 |
| BstZ17I | GTATAC | 1 cut(s) | 270 |
| Bsu15I | ATCGAT | 1 cut(s) | 1102 |
| BsuI | GTATCC | 2 cut(s) | 229, 664 |
| BsuRI | GGCC | 4 cut(s) | 611, 771, 864, 1286 |
| BsuTUI | ATCGAT | 1 cut(s) | 1102 |
| BtsCI | GGATG | 4 cut(s) | 349, 1000, 1020, 1358 |
| BtsI | GCAGTG | 1 cut(s) | 60 |
| BtsIMutI | CAGTG | 3 cut(s) | 60, 165, 524 |
| BveI | ACCTGC | 1 cut(s) | 250 |
| Cac8I | GCNNGC | 2 cut(s) | 682, 1176 |
| CaiI | CAGNNNCTG | 1 cut(s) | 677 |
| CciI | TCATGA | 1 cut(s) | 1248 |
| CfoI | GCGC | 1 cut(s) | 564 |
| Cfr10I | RCCGGY | 1 cut(s) | 869 |
| Cfr13I | GGNCC | 2 cut(s) | 610, 770 |
| ClaI | ATCGAT | 1 cut(s) | 1102 |
| CseI | GACGC | 1 cut(s) | 98 |
| Csp6I | GTAC | 3 cut(s) | 491, 978, 1240 |
| CviAII | CATG | 5 cut(s) | 695, 866, 1249, 1282, 1320 |
| CviQI | GTAC | 3 cut(s) | 491, 978, 1240 |
| DdeI | CTNAG | 4 cut(s) | 153, 181, 273, 661 |
| DpnI | GATC | 5 cut(s) | 390, 523, 676, 1105, 1170 |
| DpnII | GATC | 5 cut(s) | 388, 521, 674, 1103, 1168 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 324 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 324 |
| EaeI | YGGCCR | 1 cut(s) | 1284 |
| Eam1104I | CTCTTC | 2 cut(s) | 546, 1062 |
| EarI | CTCTTC | 2 cut(s) | 546, 1062 |
| EciI | GGCGGA | 1 cut(s) | 1161 |
| Eco57I | CTGAAG | 2 cut(s) | 647, 1368 |
| EcoO109I | RGGNCCY | 2 cut(s) | 610, 770 |
| EcoRII | CCWGG | 4 cut(s) | 257, 612, 1003, 1286 |
| EcoT22I | ATGCAT | 1 cut(s) | 1360 |
| FaeI | CATG | 5 cut(s) | 698, 869, 1252, 1285, 1323 |
| FaqI | GGGAC | 1 cut(s) | 330 |
| FatI | CATG | 5 cut(s) | 694, 865, 1248, 1281, 1319 |
| FblI | GTMKAC | 1 cut(s) | 269 |
| Fnu4HI | GCNGC | 5 cut(s) | 589, 669, 822, 912, 915 |
| FokI | GGATG | 4 cut(s) | 356, 987, 1007, 1345 |
| Fsp4HI | GCNGC | 5 cut(s) | 589, 669, 822, 912, 915 |
| FspBI | CTAG | 6 cut(s) | 18, 467, 581, 908, 929, 1406 |
| GlaI | GCGC | 1 cut(s) | 563 |
| GluI | GCNGC | 5 cut(s) | 589, 669, 822, 912, 915 |
| GsaI | CCCAGC | 1 cut(s) | 830 |
| GsuI | CTGGAG | 2 cut(s) | 1013, 1026 |
| HaeIII | GGCC | 4 cut(s) | 611, 771, 864, 1286 |
| HapII | CCGG | 1 cut(s) | 870 |
| HgaI | GACGC | 1 cut(s) | 98 |
| HhaI | GCGC | 1 cut(s) | 564 |
| Hin1II | CATG | 5 cut(s) | 698, 869, 1252, 1285, 1323 |
| Hin6I | GCGC | 1 cut(s) | 562 |
| HinP1I | GCGC | 1 cut(s) | 562 |
| HindIII | AAGCTT | 1 cut(s) | 1212 |
| HinfI | GANTC | 5 cut(s) | 137, 190, 570, 953, 1271 |
| HpaII | CCGG | 1 cut(s) | 870 |
| HphI | GGTGA | 1 cut(s) | 535 |
| Hpy166II | GTNNAC | 3 cut(s) | 270, 543, 1127 |
| Hpy188I | TCNGA | 7 cut(s) | 9, 235, 550, 627, 1147, 1186, 1299 |
| Hpy188III | TCNNGA | 9 cut(s) | 77, 134, 386, 438, 992, 1040, 1166, 1249, 1367 |
| Hpy8I | GTNNAC | 3 cut(s) | 270, 543, 1127 |
| HpyAV | CCTTC | 5 cut(s) | 67, 368, 667, 782, 845 |
| HpyCH4III | ACNGT | 4 cut(s) | 169, 637, 973, 982 |
| HpyCH4IV | ACGT | 3 cut(s) | 945, 1129, 1238 |
| HpyF3I | CTNAG | 4 cut(s) | 153, 181, 273, 661 |
| HpySE526I | ACGT | 3 cut(s) | 945, 1129, 1238 |
| Hsp92II | CATG | 5 cut(s) | 698, 869, 1252, 1285, 1323 |
| HspAI | GCGC | 1 cut(s) | 562 |
| Kzo9I | GATC | 5 cut(s) | 388, 521, 674, 1103, 1168 |
| LguI | GCTCTTC | 2 cut(s) | 546, 1062 |
| LmnI | GCTCC | 4 cut(s) | 42, 59, 994, 1007 |
| Lsp1109I | GCAGC | 4 cut(s) | 655, 833, 901, 923 |
| LweI | GCATC | 8 cut(s) | 334, 412, 655, 691, 889, 1029, 1045, 1367 |
| MaeI | CTAG | 6 cut(s) | 18, 467, 581, 908, 929, 1406 |
| MaeII | ACGT | 3 cut(s) | 945, 1129, 1238 |
| MaeIII | GTNAC | 5 cut(s) | 253, 353, 808, 1322, 1331 |
| MalI | GATC | 5 cut(s) | 390, 523, 676, 1105, 1170 |
| MboI | GATC | 5 cut(s) | 388, 521, 674, 1103, 1168 |
| MboII | GAAGA | 8 cut(s) | 23, 98, 563, 640, 710, 1079, 1086, 1361 |
| MfeI | CAATTG | 2 cut(s) | 798, 1110 |
| MflI | RGATCY | 3 cut(s) | 388, 674, 1168 |
| MlsI | TGGCCA | 1 cut(s) | 1286 |
| MluCI | AATT | 9 cut(s) | 27, 752, 798, 920, 1044, 1086, 1095, 1110, 1197 |
| MluNI | TGGCCA | 1 cut(s) | 1286 |
| MlyI | GAGTC | 1 cut(s) | 184 |
| Mox20I | TGGCCA | 1 cut(s) | 1286 |
| Mph1103I | ATGCAT | 1 cut(s) | 1360 |
| MscI | TGGCCA | 1 cut(s) | 1286 |
| MseI | TTAA | 4 cut(s) | 593, 722, 1014, 1235 |
| MslI | CAYNNNNRTG | 5 cut(s) | 81, 420, 699, 870, 1423 |
| Msp20I | TGGCCA | 1 cut(s) | 1286 |
| MspA1I | CMGCKG | 2 cut(s) | 576, 914 |
| MspI | CCGG | 1 cut(s) | 870 |
| MspR9I | CCNGG | 4 cut(s) | 259, 614, 1005, 1288 |
| MunI | CAATTG | 2 cut(s) | 798, 1110 |
| MvaI | CCWGG | 4 cut(s) | 259, 614, 1005, 1288 |
| MvnI | CGCG | 1 cut(s) | 562 |
| NdeII | GATC | 5 cut(s) | 388, 521, 674, 1103, 1168 |
| NlaIII | CATG | 5 cut(s) | 698, 869, 1252, 1285, 1323 |
| NlaIV | GGNNCC | 3 cut(s) | 772, 1009, 1170 |
| NmeAIII | GCCGAG | 1 cut(s) | 1283 |
| NsiI | ATGCAT | 1 cut(s) | 1360 |
| PagI | TCATGA | 1 cut(s) | 1248 |
| PaqCI | CACCTGC | 1 cut(s) | 250 |
| PciSI | GCTCTTC | 2 cut(s) | 546, 1062 |
| PfeI | GAWTC | 4 cut(s) | 137, 570, 953, 1271 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 437 |
| PfoI | TCCNGGA | 1 cut(s) | 1003 |
| PkrI | GCNGC | 5 cut(s) | 590, 670, 823, 913, 916 |
| PleI | GAGTC | 1 cut(s) | 184 |
| PpsI | GAGTC | 1 cut(s) | 184 |
| Ppu21I | YACGTR | 1 cut(s) | 946 |
| Psp6I | CCWGG | 4 cut(s) | 257, 612, 1003, 1286 |
| PspFI | CCCAGC | 1 cut(s) | 826 |
| PspGI | CCWGG | 4 cut(s) | 257, 612, 1003, 1286 |
| PspN4I | GGNNCC | 3 cut(s) | 772, 1009, 1170 |
| PspPI | GGNCC | 2 cut(s) | 610, 770 |
| PstI | CTGCAG | 3 cut(s) | 400, 673, 919 |
| PstNI | CAGNNNCTG | 1 cut(s) | 677 |
| PsuI | RGATCY | 3 cut(s) | 388, 674, 1168 |
| PvuII | CAGCTG | 2 cut(s) | 576, 914 |
| RsaI | GTAC | 3 cut(s) | 492, 979, 1241 |
| RsaNI | GTAC | 3 cut(s) | 491, 978, 1240 |
| RseI | CAYNNNNRTG | 5 cut(s) | 81, 420, 699, 870, 1423 |
| SapI | GCTCTTC | 2 cut(s) | 546, 1062 |
| SaqAI | TTAA | 4 cut(s) | 593, 722, 1014, 1235 |
| SatI | GCNGC | 5 cut(s) | 589, 669, 822, 912, 915 |
| Sau3AI | GATC | 5 cut(s) | 388, 521, 674, 1103, 1168 |
| Sau96I | GGNCC | 2 cut(s) | 610, 770 |
| SchI | GAGTC | 1 cut(s) | 184 |
| ScrFI | CCNGG | 4 cut(s) | 259, 614, 1005, 1288 |
| SfaNI | GCATC | 8 cut(s) | 334, 412, 655, 691, 889, 1029, 1045, 1367 |
| SfcI | CTRYAG | 5 cut(s) | 396, 474, 669, 915, 1116 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 81, 420, 699, 870, 1423 |
| Sse9I | AATT | 9 cut(s) | 27, 752, 798, 920, 1044, 1086, 1095, 1110, 1197 |
| SsiI | CCGC | 2 cut(s) | 589, 1172 |
| SspMI | CTAG | 6 cut(s) | 18, 467, 581, 908, 929, 1406 |
| StyD4I | CCNGG | 4 cut(s) | 257, 612, 1003, 1286 |
| TaaI | ACNGT | 4 cut(s) | 169, 637, 973, 982 |
| TaiI | ACGT | 3 cut(s) | 948, 1132, 1241 |
| TaqI | TCGA | 3 cut(s) | 224, 1102, 1220 |
| TasI | AATT | 9 cut(s) | 27, 752, 798, 920, 1044, 1086, 1095, 1110, 1197 |
| TatI | WGTACW | 1 cut(s) | 490 |
| TauI | GCSGC | 1 cut(s) | 591 |
| TfiI | GAWTC | 4 cut(s) | 137, 570, 953, 1271 |
| Tru1I | TTAA | 4 cut(s) | 593, 722, 1014, 1235 |
| Tru9I | TTAA | 4 cut(s) | 593, 722, 1014, 1235 |
| TscAI | CASTG | 3 cut(s) | 67, 172, 531 |
| TseI | GCWGC | 4 cut(s) | 668, 821, 911, 914 |
| TspRI | CASTG | 3 cut(s) | 67, 172, 531 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 437 |
| XapI | RAATTY | 1 cut(s) | 1095 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 523 |
| XmiI | GTMKAC | 1 cut(s) | 269 |
| XspI | CTAG | 6 cut(s) | 18, 467, 581, 908, 929, 1406 |
| Zsp2I | ATGCAT | 1 cut(s) | 1360 |