Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0011917

Physical Location & Seq

Genomic Coordinates Reverse (-)

4408792 .. 4415349

Gene Structure 6558 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00336590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1539 bp

ATGCCTCTCAGATTATCTATCTCAGCACTCATCGTGCTCTTCTTCTTCTTCCTCTGTTCCTTCACTGCAACCTTAGCCCACAACAATGAAGACCCAACGATCAAAACAATGGAGGACTTCTCAGGCTACCCAATTCACGAGTCACAATCTCACCTTTCTTCACTATCAGTTGACGCTCAAAGTTTACAGAAACAGATTGATGAACTTTCAAGTTTTTCGGATACACCTGCCCCATCAGTGACCAGGGTCTTGTATACTGAGAAGGATGTCTTGGCGCGTAGATTCATCAAAAACTTGATGGGACTCTCTGGTTTGTCTGTTAGAGAGGATGCTGTTGGTAACATATTTGGTCGATGGGAAGGCTCTAATCCAGAGCTTTCTGCCGTTGCAACAGGTTCTCACATTGATGCCATTCCATACTCTGGAAAGTATGATGGAGTTGTGGGTGTTTTGGGTGCTATAGAAGCAATCAATGTACTAATAAGGTCCGGGTTCAAACCTAAACGATCACTAGAAGTTATCATGTTCACCTCAGAAGAGCCTACACGCTTTGGAATAAGCTGTCTGGGAAGGTTCGGATCAGCACCTGGTCACCGAAGCTACTCTGCTTTTGTGGAATTGCATATCGAGCAGGGCCCTCTTTTGGAGGAGGAAGGTATACCAATTGGCATTGTAACTGCCATTGCAGCCCCGGCAAGCATAAAAGTGGAGTTTCAGGGAAATGGAGGCCATGCGGGTGCTGTCCTGATGCCAAATAGAAATGATGCTGGACTAGCAGCTGCAGAATTAGCGCTAGCAGTTGAAAGACATGTATTAGAATCTGGATCTATTGATACTGTTGGTACAGTTGGTATTCTGGAGCTACACCCCGGAGCCATCAACAGCATCCCAAGCAAATCACGTCTGGAAATCGACACAAGAGACATTGATGAAGAGCGAAGAAACACCGTAATTGAGAAAATCCATCAATCTGCAATTTCTATAGCCAGAAAGCGGCGAGTCACTCTATCCGAATTCAAAATCGTAAACCAGGATCCACCTGCACTTTCTGAGAAATCAATACTTGACACAATGAATATCCCCAATGGGCATGATATTCATTCCATGTTACAAAGGTTACAGCCCATAAACCTGAAAGAGTATTCCCTCTACTCAGGACATATCGAATGGGGTCAAGTCATATATAGGCCAGTCTGTCAACTGGCCTTTATCAGACTTAGTATAGATGCAACATGGACTTATATTAATAACCCTATCGCAAGGAAAAGATGGCGCCATATTGAAGAAGTAGTTCACGTTGATAATAAACTTTATTCTATTGATTATTGGAGGCAACTTTTGTCTATTGATAGTACTGCTCAGAGCAACTTGGATGATGAAGAACCGGTGGCGCGCGGCATTGAAAGAAAGAATGGCTACGTCTTCTCCGGGAAGAATTATTTGGTGAACTTTGATAAGAAAGAATTGTTGATGGTTCAACGGTATTTTGATTTTGATGAAGTTGATGACAAACGTGTGACAACAAAATTCAAAGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000255 GO:0000256 GO:0003674 GO:0003824 GO:0004848 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006139 GO:0006144 GO:0006145 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009112 GO:0009987 GO:0010135 GO:0010136 GO:0012505 GO:0016787 GO:0016810 GO:0016813 GO:0017144 GO:0019439 GO:0034641 GO:0042737 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043605 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046113 GO:0046483 GO:0046700 GO:0055086 GO:0071704 GO:0072521 GO:0072523 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 ko01120 map00230 map01100 map01120

Pfam Domains

Protein Families

M20_dimer Peptidase_M20 Peptidase_M28

Protein Analysis

512

Amino Acids

57.07

Weight (kDa)

5.8

Isoelectric Point (pI)

47.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M28	PF04389	114 - 182	1.9e-06	Peptidase family M28
Peptidase_M20	PF01546	131 - 270	8.8e-11	Peptidase family M20/M25/M40
Beta-prop_KIB1-4	PF03478	394 - 512	3.1e-07	KIB1-4 beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011917)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G43600
fragaria_vesca	FvH4_4g02810
malus_domestica	MD13G1207900.v1.1
prunus_persica	Prupe.1G031400_v2.0.a1
pyrus_communis	pycom13g18000
rosa_chinensis	RchiOBHm_Chr4g0390621 RchiOBHm_Chr4g0390681
rosa_laevigata	RLG00000009913
rosa_multiflora	Rmu_co8283127.1_g000001 Rmu_sc0000171.1_g000034 Rmu_sc0001380.1_g000018
rosa_roxburghii	Rroxscaffold_1G00049440 Rroxscaffold_5G00336590
rosa_rugosa	Rorug03G0331300 Rorug03G0331400
rosa_samantha	Rh4AG032900 Rh4BG026800 Rh4CG036700 Rh4DG029900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	235, 1048
Acc36I	ACCTGC	2 cut(s)	235, 1048
AccB1I	GGYRCC	1 cut(s)	1272
AccB7I	CCANNNNNTGG	1 cut(s)	422
AccI	GTMKAC	2 cut(s)	254, 658
AccII	CGCG	3 cut(s)	277, 1393, 1395
AciI	CCGC	3 cut(s)	734, 994, 1395
AclWI	GGATC	4 cut(s)	586, 832, 1028, 1041
AcsI	RAATTY	2 cut(s)	1013, 1526
AcyI	GRCGYC	1 cut(s)	1273
AfaI	GTAC	3 cut(s)	477, 844, 1354
AfeI	AGCGCT	1 cut(s)	792
AfiI	CCNNNNNNNGG	3 cut(s)	422, 643, 993
AflIII	ACRYGT	2 cut(s)	808, 1513
AgeI	ACCGGT	1 cut(s)	1384
AgsI	TTSAA	8 cut(s)	210, 496, 803, 1018, 1283, 1403, 1478, 1531
AjiI	CACGTC	1 cut(s)	902
AjnI	CCWGG	3 cut(s)	242, 586, 1029
AjuI	GAANNNNNNNTTGG	4 cut(s)	254, 286, 1424, 1456
AluBI	AGCT	5 cut(s)	376, 561, 600, 779, 862
AluI	AGCT	5 cut(s)	376, 561, 600, 779, 862
Alw21I	GWGCWC	1 cut(s)	39
Alw26I	GTCTC	1 cut(s)	915
AlwI	GGATC	4 cut(s)	586, 832, 1028, 1041
AlwNI	CAGNNNCTG	1 cut(s)	587
Aor51HI	AGCGCT	1 cut(s)	792
AoxI	GGCC	4 cut(s)	634, 727, 1187, 1203
ApaI	GGGCCC	1 cut(s)	638
ApeKI	GCWGC	3 cut(s)	686, 776, 779
ApoI	RAATTY	2 cut(s)	1013, 1526
AseI	ATTAAT	1 cut(s)	1245
AsiGI	ACCGGT	1 cut(s)	1384
Asp700I	GAANNNNTTC	1 cut(s)	1290
AspLEI	GCGC	5 cut(s)	277, 793, 1275, 1393, 1395
AspS9I	GGNCC	3 cut(s)	486, 634, 635
AsuC2I	CCSGG	4 cut(s)	490, 692, 870, 1429
AsuHPI	GGTGA	4 cut(s)	143, 520, 584, 1456
AsuNHI	GCTAGC	1 cut(s)	793
AvaII	GGWCC	1 cut(s)	486
BaeGI	GKGCMC	1 cut(s)	638
BamHI	GGATCC	1 cut(s)	1033
BanI	GGYRCC	1 cut(s)	1272
BanII	GRGCYC	1 cut(s)	638
BauI	CACGAG	1 cut(s)	137
BbsI	GAAGAC	2 cut(s)	96, 1414
Bbv12I	GWGCWC	1 cut(s)	39
BbvI	GCAGC	3 cut(s)	698, 766, 788
BccI	CCATC	8 cut(s)	241, 292, 348, 428, 884, 972, 1263, 1465
BceAI	ACGGC	1 cut(s)	368
BciT130I	CCWGG	3 cut(s)	244, 588, 1031
BciVI	GTATCC	1 cut(s)	214
BcnI	CCSGG	4 cut(s)	490, 692, 870, 1429
BcoDI	GTCTC	1 cut(s)	915
BfaI	CTAG	3 cut(s)	512, 773, 794
BfmI	CTRYAG	3 cut(s)	459, 780, 981
BfoI	RGCGCY	2 cut(s)	794, 1276
BfuAI	ACCTGC	2 cut(s)	235, 1048
BfuI	GTATCC	1 cut(s)	214
BisI	GCNGC	5 cut(s)	687, 777, 780, 995, 1396
BlsI	GCNGC	5 cut(s)	688, 778, 781, 996, 1397
BmcAI	AGTACT	1 cut(s)	1354
Bme1390I	CCNGG	7 cut(s)	244, 490, 588, 692, 870, 1031, 1429
Bme18I	GGWCC	1 cut(s)	486
BmgBI	CACGTC	1 cut(s)	902
BmgT120I	GGNCC	3 cut(s)	486, 634, 635
BmiI	GGNNCC	4 cut(s)	636, 874, 1035, 1274
BmrFI	CCNGG	7 cut(s)	244, 490, 588, 692, 870, 1031, 1429
BmsI	GCATC	6 cut(s)	319, 397, 738, 754, 894, 1216
BmtI	GCTAGC	1 cut(s)	797
BoxI	GACNNNNGTC	1 cut(s)	245
BpiI	GAAGAC	2 cut(s)	96, 1414
BplI	GAGNNNNNCTC	2 cut(s)	104, 136
BpmI	CTGGAG	1 cut(s)	878
Bpu10I	CCTNAGC	1 cut(s)	73
BpuMI	CCSGG	4 cut(s)	490, 692, 870, 1429
BsaHI	GRCGYC	1 cut(s)	1273
BsaJI	CCNNGG	3 cut(s)	243, 690, 868
BsaWI	WCCGGW	1 cut(s)	1384
BsaXI	ACNNNNNCTCC	2 cut(s)	1409, 1439
Bsc4I	CCNNNNNNNGG	3 cut(s)	422, 643, 993
Bse118I	RCCGGY	1 cut(s)	1384
Bse1I	ACTGG	2 cut(s)	1190, 1206
Bse3DI	GCAATG	1 cut(s)	681
BseBI	CCWGG	3 cut(s)	244, 588, 1031
BseDI	CCNNGG	3 cut(s)	243, 690, 868
BseGI	GGATG	4 cut(s)	271, 334, 885, 1378
BseLI	CCNNNNNNNGG	3 cut(s)	422, 643, 993
BseMI	GCAATG	1 cut(s)	681
BseMII	CTCAG	8 cut(s)	22, 36, 135, 249, 546, 1041, 1167, 1373
BseNI	ACTGG	2 cut(s)	1190, 1206
BsePI	GCGCGC	1 cut(s)	1391
BseRI	GAGGAG	1 cut(s)	662
BseSI	GKGCMC	1 cut(s)	638
BseXI	GCAGC	3 cut(s)	698, 766, 788
BsgI	GTGCAG	1 cut(s)	1026
Bsh1236I	CGCG	3 cut(s)	277, 1393, 1395
BshFI	GGCC	4 cut(s)	636, 729, 1189, 1205
BshNI	GGYRCC	1 cut(s)	1272
BshTI	ACCGGT	1 cut(s)	1384
BsiHKAI	GWGCWC	1 cut(s)	39
BsiSI	CCGG	5 cut(s)	489, 692, 870, 1385, 1428
BslFI	GGGAC	1 cut(s)	315
BslI	CCNNNNNNNGG	3 cut(s)	422, 643, 993
BsmAI	GTCTC	1 cut(s)	915
BsmFI	GGGAC	1 cut(s)	315
BsnI	GGCC	4 cut(s)	636, 729, 1189, 1205
Bsp120I	GGGCCC	1 cut(s)	634
Bsp1286I	GDGCHC	2 cut(s)	39, 638
Bsp143I	GATC	5 cut(s)	99, 506, 578, 824, 1033
BspACI	CCGC	3 cut(s)	734, 994, 1395
BspANI	GGCC	4 cut(s)	636, 729, 1189, 1205
BspCNI	CTCAG	8 cut(s)	21, 35, 134, 250, 545, 1042, 1166, 1372
BspFNI	CGCG	3 cut(s)	277, 1393, 1395
BspLI	GGNNCC	4 cut(s)	636, 874, 1035, 1274
BspMAI	CTGCAG	1 cut(s)	784
BspMI	ACCTGC	2 cut(s)	235, 1048
BspOI	GCTAGC	1 cut(s)	797
BspPI	GGATC	4 cut(s)	586, 832, 1028, 1041
BspQI	GCTCTTC	3 cut(s)	44, 531, 927
BspT107I	GGYRCC	1 cut(s)	1272
BsrDI	GCAATG	1 cut(s)	681
BsrFI	RCCGGY	1 cut(s)	1384
BsrI	ACTGG	2 cut(s)	1190, 1206
BssAI	RCCGGY	1 cut(s)	1384
BssECI	CCNNGG	3 cut(s)	243, 690, 868
BssHII	GCGCGC	1 cut(s)	1391
BssMI	GATC	5 cut(s)	99, 506, 578, 824, 1033
BssNAI	GTATAC	2 cut(s)	255, 659
BssNI	GRCGYC	1 cut(s)	1273
BssSI	CACGAG	1 cut(s)	137
Bst1107I	GTATAC	2 cut(s)	255, 659
Bst2BI	CACGAG	1 cut(s)	137
Bst2UI	CCWGG	3 cut(s)	244, 588, 1031
Bst4CI	ACNGT	4 cut(s)	838, 847, 949, 1482
Bst6I	CTCTTC	3 cut(s)	44, 531, 927
BstACI	GRCGYC	1 cut(s)	1273
BstC8I	GCNNGC	3 cut(s)	697, 795, 1393
BstEII	GGTNACC	1 cut(s)	590
BstF5I	GGATG	4 cut(s)	271, 334, 885, 1378
BstFNI	CGCG	3 cut(s)	277, 1393, 1395
BstH2I	RGCGCY	2 cut(s)	794, 1276
BstHHI	GCGC	5 cut(s)	277, 793, 1275, 1393, 1395
BstKTI	GATC	5 cut(s)	102, 509, 581, 827, 1036
BstMAI	GTCTC	1 cut(s)	915
BstMBI	GATC	5 cut(s)	99, 506, 578, 824, 1033
BstMWI	GCNNNNNNNGC	8 cut(s)	74, 464, 628, 686, 692, 773, 788, 891
BstNI	CCWGG	3 cut(s)	244, 588, 1031
BstNSI	RCATGY	1 cut(s)	812
BstPAI	GACNNNNGTC	1 cut(s)	245
BstPI	GGTNACC	1 cut(s)	590
BstSCI	CCNGG	7 cut(s)	242, 488, 586, 690, 868, 1029, 1427
BstSFI	CTRYAG	3 cut(s)	459, 780, 981
BstSLI	GKGCMC	1 cut(s)	638
BstUI	CGCG	3 cut(s)	277, 1393, 1395
BstV1I	GCAGC	3 cut(s)	698, 766, 788
BstV2I	GAAGAC	2 cut(s)	96, 1414
BstX2I	RGATCY	2 cut(s)	824, 1033
BstYI	RGATCY	2 cut(s)	824, 1033
BstZ17I	GTATAC	2 cut(s)	255, 659
BsuI	GTATCC	1 cut(s)	214
BsuRI	GGCC	4 cut(s)	636, 729, 1189, 1205
BtrI	CACGTC	1 cut(s)	902
BtsCI	GGATG	4 cut(s)	271, 334, 885, 1378
BtsI	GCAGTG	1 cut(s)	63
BtsIMutI	CAGTG	2 cut(s)	63, 243
BveI	ACCTGC	2 cut(s)	235, 1048
Cac8I	GCNNGC	3 cut(s)	697, 795, 1393
CaiI	CAGNNNCTG	1 cut(s)	587
CfoI	GCGC	5 cut(s)	277, 793, 1275, 1393, 1395
Cfr10I	RCCGGY	1 cut(s)	1384
Cfr13I	GGNCC	3 cut(s)	486, 634, 635
CseI	GACGC	1 cut(s)	182
CsiI	ACCWGGT	1 cut(s)	586
Csp6I	GTAC	3 cut(s)	476, 843, 1353
CspAI	ACCGGT	1 cut(s)	1384
CviAII	CATG	6 cut(s)	523, 731, 809, 1091, 1105, 1233
CviQI	GTAC	3 cut(s)	476, 843, 1353
DinI	GGCGCC	1 cut(s)	1274
DpnI	GATC	5 cut(s)	101, 508, 580, 826, 1035
DpnII	GATC	5 cut(s)	99, 506, 578, 824, 1033
Eam1104I	CTCTTC	3 cut(s)	44, 531, 927
EarI	CTCTTC	3 cut(s)	44, 531, 927
Eco24I	GRGCYC	1 cut(s)	638
Eco47I	GGWCC	1 cut(s)	486
Eco47III	AGCGCT	1 cut(s)	792
Eco91I	GGTNACC	1 cut(s)	590
EcoO109I	RGGNCCY	2 cut(s)	634, 635
EcoO65I	GGTNACC	1 cut(s)	590
EcoRI	GAATTC	1 cut(s)	1013
EcoRII	CCWGG	3 cut(s)	242, 586, 1029
EcoT38I	GRGCYC	1 cut(s)	638
EgeI	GGCGCC	1 cut(s)	1274
EheI	GGCGCC	1 cut(s)	1274
FaeI	CATG	6 cut(s)	526, 734, 812, 1094, 1108, 1236
FalI	AAGNNNNNCTT	2 cut(s)	254, 286
FaqI	GGGAC	1 cut(s)	315
FatI	CATG	6 cut(s)	522, 730, 808, 1090, 1104, 1232
FauI	CCCGC	1 cut(s)	727
FblI	GTMKAC	2 cut(s)	254, 658
Fnu4HI	GCNGC	5 cut(s)	687, 777, 780, 995, 1396
FokI	GGATG	4 cut(s)	278, 341, 872, 1385
FriOI	GRGCYC	1 cut(s)	638
Fsp4HI	GCNGC	5 cut(s)	687, 777, 780, 995, 1396
FspBI	CTAG	3 cut(s)	512, 773, 794
GlaI	GCGC	5 cut(s)	276, 792, 1274, 1392, 1394
GluI	GCNGC	5 cut(s)	687, 777, 780, 995, 1396
GsuI	CTGGAG	1 cut(s)	878
HaeII	RGCGCY	2 cut(s)	794, 1276
HaeIII	GGCC	4 cut(s)	636, 729, 1189, 1205
HapII	CCGG	5 cut(s)	489, 692, 870, 1385, 1428
HgaI	GACGC	1 cut(s)	182
HhaI	GCGC	5 cut(s)	277, 793, 1275, 1393, 1395
Hin1I	GRCGYC	1 cut(s)	1273
Hin1II	CATG	6 cut(s)	526, 734, 812, 1094, 1108, 1236
Hin6I	GCGC	5 cut(s)	275, 791, 1273, 1391, 1393
HinP1I	GCGC	5 cut(s)	275, 791, 1273, 1391, 1393
HincII	GTYRAC	2 cut(s)	172, 1199
HindII	GTYRAC	2 cut(s)	172, 1199
HinfI	GANTC	5 cut(s)	140, 282, 303, 818, 999
HpaII	CCGG	5 cut(s)	489, 692, 870, 1385, 1428
HphI	GGTGA	4 cut(s)	143, 520, 584, 1456
Hpy166II	GTNNAC	9 cut(s)	172, 185, 255, 528, 659, 1027, 1199, 1294, 1447
Hpy188I	TCNGA	8 cut(s)	11, 220, 535, 578, 1012, 1051, 1214, 1362
Hpy188III	TCNNGA	8 cut(s)	137, 371, 423, 745, 822, 857, 905, 1155
Hpy8I	GTNNAC	9 cut(s)	172, 185, 255, 528, 659, 1027, 1199, 1294, 1447
HpyAV	CCTTC	5 cut(s)	70, 256, 353, 564, 647
HpyCH4III	ACNGT	4 cut(s)	838, 847, 949, 1482
HpyCH4IV	ACGT	4 cut(s)	901, 1296, 1419, 1513
HpyCH4V	TGCA	8 cut(s)	68, 389, 622, 686, 782, 974, 1043, 1229
HpyF10VI	GCNNNNNNNGC	8 cut(s)	74, 464, 628, 686, 692, 773, 788, 891
HpySE526I	ACGT	4 cut(s)	901, 1296, 1419, 1513
Hsp92I	GRCGYC	1 cut(s)	1273
Hsp92II	CATG	6 cut(s)	526, 734, 812, 1094, 1108, 1236
HspAI	GCGC	5 cut(s)	275, 791, 1273, 1391, 1393
KasI	GGCGCC	1 cut(s)	1272
Kzo9I	GATC	5 cut(s)	99, 506, 578, 824, 1033
LguI	GCTCTTC	3 cut(s)	44, 531, 927
LmnI	GCTCC	2 cut(s)	859, 872
Lsp1109I	GCAGC	3 cut(s)	698, 766, 788
LweI	GCATC	6 cut(s)	319, 397, 738, 754, 894, 1216
MabI	ACCWGGT	1 cut(s)	586
MaeI	CTAG	3 cut(s)	512, 773, 794
MaeII	ACGT	4 cut(s)	901, 1296, 1419, 1513
MaeIII	GTNAC	9 cut(s)	141, 238, 338, 590, 673, 1000, 1107, 1116, 1516
MalI	GATC	5 cut(s)	101, 508, 580, 826, 1035
MboI	GATC	5 cut(s)	99, 506, 578, 824, 1033
MfeI	CAATTG	1 cut(s)	663
MflI	RGATCY	2 cut(s)	824, 1033
MhlI	GDGCHC	2 cut(s)	39, 638
Mly113I	GGCGCC	1 cut(s)	1273
MlyI	GAGTC	3 cut(s)	149, 297, 1008
MroXI	GAANNNNTTC	1 cut(s)	1290
MseI	TTAA	2 cut(s)	1245, 1537
MslI	CAYNNNNRTG	4 cut(s)	84, 405, 704, 735
MspA1I	CMGCKG	1 cut(s)	779
MspI	CCGG	5 cut(s)	489, 692, 870, 1385, 1428
MspR9I	CCNGG	7 cut(s)	244, 490, 588, 692, 870, 1031, 1429
MunI	CAATTG	1 cut(s)	663
MvaI	CCWGG	3 cut(s)	244, 588, 1031
MvnI	CGCG	3 cut(s)	277, 1393, 1395
MwoI	GCNNNNNNNGC	8 cut(s)	74, 464, 628, 686, 692, 773, 788, 891
NarI	GGCGCC	1 cut(s)	1273
NciI	CCSGG	4 cut(s)	490, 692, 870, 1429
NdeII	GATC	5 cut(s)	99, 506, 578, 824, 1033
NheI	GCTAGC	1 cut(s)	793
NlaIII	CATG	6 cut(s)	526, 734, 812, 1094, 1108, 1236
NlaIV	GGNNCC	4 cut(s)	636, 874, 1035, 1274
NmuCI	GTSAC	5 cut(s)	141, 238, 590, 1000, 1516
NspI	RCATGY	1 cut(s)	812
PaqCI	CACCTGC	2 cut(s)	235, 1048
PauI	GCGCGC	1 cut(s)	1391
PciI	ACATGT	1 cut(s)	808
PciSI	GCTCTTC	3 cut(s)	44, 531, 927
PdmI	GAANNNNTTC	1 cut(s)	1290
PfeI	GAWTC	2 cut(s)	282, 818
PflMI	CCANNNNNTGG	1 cut(s)	422
PfoI	TCCNGGA	1 cut(s)	1427
PinAI	ACCGGT	1 cut(s)	1384
PkrI	GCNGC	5 cut(s)	688, 778, 781, 996, 1397
PleI	GAGTC	3 cut(s)	148, 297, 1007
PluTI	GGCGCC	1 cut(s)	1276
PpsI	GAGTC	3 cut(s)	148, 297, 1007
PscI	ACATGT	1 cut(s)	808
PshAI	GACNNNNGTC	1 cut(s)	245
PshBI	ATTAAT	1 cut(s)	1245
Psp6I	CCWGG	3 cut(s)	242, 586, 1029
PspEI	GGTNACC	1 cut(s)	590
PspGI	CCWGG	3 cut(s)	242, 586, 1029
PspN4I	GGNNCC	4 cut(s)	636, 874, 1035, 1274
PspOMI	GGGCCC	1 cut(s)	634
PspPI	GGNCC	3 cut(s)	486, 634, 635
PstI	CTGCAG	1 cut(s)	784
PstNI	CAGNNNCTG	1 cut(s)	587
PsuI	RGATCY	2 cut(s)	824, 1033
PteI	GCGCGC	1 cut(s)	1391
PvuII	CAGCTG	1 cut(s)	779
RsaI	GTAC	3 cut(s)	477, 844, 1354
RsaNI	GTAC	3 cut(s)	476, 843, 1353
RseI	CAYNNNNRTG	4 cut(s)	84, 405, 704, 735
SapI	GCTCTTC	3 cut(s)	44, 531, 927
SaqAI	TTAA	2 cut(s)	1245, 1537
SatI	GCNGC	5 cut(s)	687, 777, 780, 995, 1396
Sau3AI	GATC	5 cut(s)	99, 506, 578, 824, 1033
Sau96I	GGNCC	3 cut(s)	486, 634, 635
ScaI	AGTACT	1 cut(s)	1354
SchI	GAGTC	3 cut(s)	149, 297, 1008
ScrFI	CCNGG	7 cut(s)	244, 490, 588, 692, 870, 1031, 1429
SduI	GDGCHC	2 cut(s)	39, 638
SexAI	ACCWGGT	1 cut(s)	586
SfaNI	GCATC	6 cut(s)	319, 397, 738, 754, 894, 1216
SfcI	CTRYAG	3 cut(s)	459, 780, 981
SfoI	GGCGCC	1 cut(s)	1274
SinI	GGWCC	1 cut(s)	486
SmiMI	CAYNNNNRTG	4 cut(s)	84, 405, 704, 735
SsiI	CCGC	3 cut(s)	734, 994, 1395
SspDI	GGCGCC	1 cut(s)	1272
SspMI	CTAG	3 cut(s)	512, 773, 794
StyD4I	CCNGG	7 cut(s)	242, 488, 586, 690, 868, 1029, 1427
TaaI	ACNGT	4 cut(s)	838, 847, 949, 1482
TaiI	ACGT	4 cut(s)	904, 1299, 1422, 1516
TaqI	TCGA	4 cut(s)	352, 627, 912, 1164
TatI	WGTACW	2 cut(s)	475, 1352
TauI	GCSGC	2 cut(s)	997, 1398
TfiI	GAWTC	2 cut(s)	282, 818
Tru1I	TTAA	2 cut(s)	1245, 1537
Tru9I	TTAA	2 cut(s)	1245, 1537
TscAI	CASTG	2 cut(s)	70, 243
TseFI	GTSAC	5 cut(s)	141, 238, 590, 1000, 1516
TseI	GCWGC	3 cut(s)	686, 776, 779
Tsp45I	GTSAC	5 cut(s)	141, 238, 590, 1000, 1516
TspDTI	ATGAA	8 cut(s)	102, 216, 274, 945, 1088, 1088, 1392, 1512
TspRI	CASTG	2 cut(s)	70, 243
Van91I	CCANNNNNTGG	1 cut(s)	422
VpaK11BI	GGWCC	1 cut(s)	486
VspI	ATTAAT	1 cut(s)	1245
XapI	RAATTY	2 cut(s)	1013, 1526
XceI	RCATGY	1 cut(s)	812
XmiI	GTMKAC	2 cut(s)	254, 658
XmnI	GAANNNNTTC	1 cut(s)	1290
XspI	CTAG	3 cut(s)	512, 773, 794
ZrmI	AGTACT	1 cut(s)	1354

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.