Prupe.1G031400_v2.0.a1

Hydrolase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
2226798 .. 2231982
5185 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G031400.1

Sequence Viewer

Length: 1416 bp
ATGTCTCTGAAATTCTCTCACTCAGCAATTATTGTGCTCTTTCTCTGCTCCTTCACTACAATCTTAGCTCATGAAGATGAAGACCCAACAATCAAAACAATGGAGGATTTCTCTGGCTACCCTATTCCCGAGCCACACTTGAGCTTTCAGAACACTGTCTCTTCACTATCCGTTGACACTCGAAGTTTGCAGAAACAGATTGATGAACTTTCAACTTTCTCGGATACACCTGCCCCATCAGTTACCAGGATCTTGTACTCTGACAAGGATGTATTGGCTCGTAGATTCATCAAAAACTTGATGGGACTTTCTGGTCTCTCTGTTAGAGAGGATGCTATTGGTAACATATTTGGTCGGTGGGAAGGCTATAACCCAGATCTTTCTGCAGTTGGAACTGGCTCTCACATTGATGCCATTCCATACTCCGGAAAGTATGATGGGGTTGTGGGTGTTCTAGGTGCTATAGAAGCCATCAACGTACTAAAAAGGTCTGGGTTCAAACCTAAACGATCACTGGAAGTTATCTTGTTCACCTCAGAAGAGCCGACACGCTTTGGAATCAGCTGTCTGGGAAGCCGCCTAATGGCGGGGAGTAAGACACTTGCTAACGCTCTGAAGACAACAGTTGATGGTCAAAATATATCTTTCTTTGATGCTGCACAATCTGCTGGTTACACCAAAGATGAAGGGGACTTATCCAGCGTGTTCCTGGAAAAAGGAAGCTACTCTGCTTTTGTGGAATTGCATATTGAGCAGGGCCCTATTTTGGAGGATGAAGGTATATCAGTTGGCATTGTAACAGCCATTGCAGCCCCAGCAAGCATAAAAGTGGATTTTGAAGGCAATGGAGGCCATGCGGGTGCTGTCCTAATGCCAAATAGAAATGATGCTGGACTGGCAGCTGCAGAATTAGTGCTAGCTGTTGAGAGACATGTATTAGAATCTGGATCTATTGATACTGTTGGTACAGTTGGTATTCTGGAGCTACATCCTGGAGCCATCAACAGCATCCCTAGCAAATCACATCTAGAAATTGACACAAGAGACATTGATGAAGAACGAAGAAACGTTGTAATTGAGAAAATCCATCAATCTGCAATTACTATAGCCAGTAAACGTGGGGTCAATCTATCAGAATTCAAAATTGTAAATCAGGATCCACCAGCACTTTCTGATAAATCAATACTTGATGCAATGGAAGCTTCATCGAAAGAGCTAAACTTAACACACAAGTTTATGATTAGCCGAGCTTACCATGATTCACTGTTCATGGCCAGAGTATCCCCGATGGGTATGATATTCATTCCATGTTACAAAGGTTACAGCCACAAGCCTGAAGAATATGCCTCCAGTCAGGATATATCTAATGGGGTCAAGGTTTTAGCCTTGACCCTTGCCAAGTTGTCATTGCAGTGA

Protein Analysis

472

Amino Acids

50.91

Weight (kDa)

5.31

Isoelectric Point (pI)

41.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 238
AasI GACNNNNNNGTC 1 cut(s) 312
Acc36I ACCTGC 1 cut(s) 238
AccIII TCCGGA 1 cut(s) 425
AciI CCGC 3 cut(s) 577, 587, 857
AclI AACGTT 1 cut(s) 1068
AclWI GGATC 4 cut(s) 257, 955, 1151, 1164
AcoI YGGCCR 1 cut(s) 1272
AcsI RAATTY 2 cut(s) 11, 1136
AcuI CTGAAG 2 cut(s) 635, 1356
AfaI GTAC 3 cut(s) 257, 480, 967
AfiI CCNNNNNNNGG 4 cut(s) 425, 583, 586, 766
AflIII ACRYGT 1 cut(s) 931
AgsI TTSAA 4 cut(s) 213, 499, 839, 1141
AjnI CCWGG 3 cut(s) 245, 708, 991
Alw21I GWGCWC 1 cut(s) 39
Alw26I GTCTC 5 cut(s) 9, 163, 320, 922, 1038
AlwI GGATC 4 cut(s) 257, 955, 1151, 1164
Ama87I CYCGRG 1 cut(s) 128
Aor13HI TCCGGA 1 cut(s) 425
AoxI GGCC 3 cut(s) 757, 850, 1272
ApaI GGGCCC 1 cut(s) 761
ApeKI GCWGC 4 cut(s) 656, 809, 899, 902
ApoI RAATTY 2 cut(s) 11, 1136
AspS9I GGNCC 2 cut(s) 757, 758
AsuHPI GGTGA 1 cut(s) 523
AsuNHI GCTAGC 1 cut(s) 916
AvaI CYCGRG 1 cut(s) 128
BaeGI GKGCMC 1 cut(s) 761
BalI TGGCCA 1 cut(s) 1274
BamHI GGATCC 1 cut(s) 1156
BanII GRGCYC 1 cut(s) 761
BbsI GAAGAC 2 cut(s) 87, 623
Bbv12I GWGCWC 1 cut(s) 39
BbvI GCAGC 4 cut(s) 643, 821, 889, 911
BccI CCATC 8 cut(s) 244, 295, 431, 479, 623, 1007, 1095, 1282
BciT130I CCWGG 3 cut(s) 247, 710, 993
BciVI GTATCC 2 cut(s) 217, 1291
BcoDI GTCTC 5 cut(s) 9, 163, 320, 922, 1038
BfaI CTAG 4 cut(s) 455, 917, 1014, 1028
BfmI CTRYAG 4 cut(s) 384, 462, 903, 1104
BfuAI ACCTGC 1 cut(s) 238
BfuI GTATCC 2 cut(s) 217, 1291
BglII AGATCT 1 cut(s) 376
BisI GCNGC 5 cut(s) 577, 657, 810, 900, 903
BlsI GCNGC 5 cut(s) 578, 658, 811, 901, 904
Bme1390I CCNGG 3 cut(s) 247, 710, 993
BmeT110I CYCGRG 1 cut(s) 128
BmgT120I GGNCC 2 cut(s) 757, 758
BmiI GGNNCC 3 cut(s) 759, 997, 1158
BmrFI CCNGG 3 cut(s) 247, 710, 993
BmsI GCATC 6 cut(s) 322, 400, 643, 877, 1017, 1180
BmtI GCTAGC 1 cut(s) 920
BpiI GAAGAC 2 cut(s) 87, 623
BplI GAGNNNNNCTC 2 cut(s) 95, 127
BpmI CTGGAG 3 cut(s) 1001, 1014, 1333
BpuEI CTTGAG 1 cut(s) 160
BsaI GGTCTC 1 cut(s) 320
BsaWI WCCGGW 1 cut(s) 425
Bsc4I CCNNNNNNNGG 4 cut(s) 425, 583, 586, 766
Bse1I ACTGG 5 cut(s) 400, 519, 900, 1110, 1350
Bse3DI GCAATG 4 cut(s) 804, 850, 1200, 1406
BseAI TCCGGA 1 cut(s) 425
BseBI CCWGG 3 cut(s) 247, 710, 993
BseGI GGATG 5 cut(s) 274, 337, 778, 988, 1008
BseLI CCNNNNNNNGG 4 cut(s) 425, 583, 586, 766
BseMI GCAATG 4 cut(s) 804, 850, 1200, 1406
BseMII CTCAG 2 cut(s) 36, 549
BseNI ACTGG 5 cut(s) 400, 519, 900, 1110, 1350
BseSI GKGCMC 1 cut(s) 761
BseXI GCAGC 4 cut(s) 643, 821, 889, 911
BseYI CCCAGC 1 cut(s) 814
BsgI GTGCAG 1 cut(s) 642
BshFI GGCC 3 cut(s) 759, 852, 1274
BsiHKAI GWGCWC 1 cut(s) 39
BsiHKCI CYCGRG 1 cut(s) 128
BsiSI CCGG 1 cut(s) 426
BslFI GGGAC 2 cut(s) 318, 704
BslI CCNNNNNNNGG 4 cut(s) 425, 583, 586, 766
BsmAI GTCTC 5 cut(s) 9, 163, 320, 922, 1038
BsmFI GGGAC 2 cut(s) 318, 704
BsnI GGCC 3 cut(s) 759, 852, 1274
Bso31I GGTCTC 1 cut(s) 320
BsoBI CYCGRG 1 cut(s) 128
Bsp120I GGGCCC 1 cut(s) 757
Bsp1286I GDGCHC 2 cut(s) 39, 761
Bsp13I TCCGGA 1 cut(s) 425
Bsp143I GATC 5 cut(s) 249, 376, 509, 947, 1156
BspACI CCGC 3 cut(s) 577, 587, 857
BspANI GGCC 3 cut(s) 759, 852, 1274
BspCNI CTCAG 2 cut(s) 35, 548
BspEI TCCGGA 1 cut(s) 425
BspHI TCATGA 1 cut(s) 70
BspLI GGNNCC 3 cut(s) 759, 997, 1158
BspMAI CTGCAG 2 cut(s) 388, 907
BspMI ACCTGC 1 cut(s) 238
BspOI GCTAGC 1 cut(s) 920
BspPI GGATC 4 cut(s) 257, 955, 1151, 1164
BspQI GCTCTTC 1 cut(s) 534
BspTNI GGTCTC 1 cut(s) 320
BsrDI GCAATG 4 cut(s) 804, 850, 1200, 1406
BsrI ACTGG 5 cut(s) 400, 519, 900, 1110, 1350
BssMI GATC 5 cut(s) 249, 376, 509, 947, 1156
Bst2UI CCWGG 3 cut(s) 247, 710, 993
Bst4CI ACNGT 5 cut(s) 157, 625, 961, 970, 1266
Bst6I CTCTTC 2 cut(s) 166, 534
BstAPI GCANNNNNTGC 1 cut(s) 665
BstC8I GCNNGC 2 cut(s) 820, 918
BstDEI CTNAG 3 cut(s) 22, 64, 535
BstF5I GGATG 5 cut(s) 274, 337, 778, 988, 1008
BstKTI GATC 5 cut(s) 252, 379, 512, 950, 1159
BstMAI GTCTC 5 cut(s) 9, 163, 320, 922, 1038
BstMBI GATC 5 cut(s) 249, 376, 509, 947, 1156
BstMWI GCNNNNNNNGC 9 cut(s) 467, 665, 751, 809, 815, 849, 896, 1014, 1199
BstNI CCWGG 3 cut(s) 247, 710, 993
BstNSI RCATGY 1 cut(s) 935
BstSCI CCNGG 3 cut(s) 245, 708, 991
BstSFI CTRYAG 4 cut(s) 384, 462, 903, 1104
BstSLI GKGCMC 1 cut(s) 761
BstV1I GCAGC 4 cut(s) 643, 821, 889, 911
BstV2I GAAGAC 2 cut(s) 87, 623
BstX2I RGATCY 4 cut(s) 249, 376, 947, 1156
BstYI RGATCY 4 cut(s) 249, 376, 947, 1156
BsuI GTATCC 2 cut(s) 217, 1291
BsuRI GGCC 3 cut(s) 759, 852, 1274
BtsCI GGATG 5 cut(s) 274, 337, 778, 988, 1008
BtsIMutI CAGTG 3 cut(s) 153, 512, 1262
BveI ACCTGC 1 cut(s) 238
Cac8I GCNNGC 2 cut(s) 820, 918
CciI TCATGA 1 cut(s) 70
Cfr13I GGNCC 2 cut(s) 757, 758
Csp6I GTAC 3 cut(s) 256, 479, 966
CviAII CATG 6 cut(s) 71, 854, 932, 1256, 1270, 1308
CviQI GTAC 3 cut(s) 256, 479, 966
DdeI CTNAG 3 cut(s) 22, 64, 535
DpnI GATC 5 cut(s) 251, 378, 511, 949, 1158
DpnII GATC 5 cut(s) 249, 376, 509, 947, 1156
DrdI GACNNNNNNGTC 1 cut(s) 312
DseDI GACNNNNNNGTC 1 cut(s) 312
EaeI YGGCCR 1 cut(s) 1272
Eam1104I CTCTTC 2 cut(s) 166, 534
EarI CTCTTC 2 cut(s) 166, 534
Eco24I GRGCYC 1 cut(s) 761
Eco31I GGTCTC 1 cut(s) 320
Eco57I CTGAAG 2 cut(s) 635, 1356
Eco88I CYCGRG 1 cut(s) 128
EcoO109I RGGNCCY 2 cut(s) 757, 758
EcoRI GAATTC 1 cut(s) 1136
EcoRII CCWGG 3 cut(s) 245, 708, 991
EcoT38I GRGCYC 1 cut(s) 761
FaeI CATG 6 cut(s) 74, 857, 935, 1259, 1273, 1311
FaqI GGGAC 2 cut(s) 318, 704
FatI CATG 6 cut(s) 70, 853, 931, 1255, 1269, 1307
FauI CCCGC 2 cut(s) 580, 850
Fnu4HI GCNGC 5 cut(s) 577, 657, 810, 900, 903
FokI GGATG 5 cut(s) 281, 344, 785, 975, 995
FriOI GRGCYC 1 cut(s) 761
Fsp4HI GCNGC 5 cut(s) 577, 657, 810, 900, 903
FspBI CTAG 4 cut(s) 455, 917, 1014, 1028
GluI GCNGC 5 cut(s) 577, 657, 810, 900, 903
GsaI CCCAGC 1 cut(s) 818
GsuI CTGGAG 3 cut(s) 1001, 1014, 1333
HaeIII GGCC 3 cut(s) 759, 852, 1274
HapII CCGG 1 cut(s) 426
Hin1II CATG 6 cut(s) 74, 857, 935, 1259, 1273, 1311
HincII GTYRAC 1 cut(s) 175
HindII GTYRAC 1 cut(s) 175
HindIII AAGCTT 1 cut(s) 1200
HinfI GANTC 4 cut(s) 285, 558, 941, 1259
HpaII CCGG 1 cut(s) 426
HphI GGTGA 1 cut(s) 523
Hpy166II GTNNAC 3 cut(s) 175, 531, 1115
Hpy188I TCNGA 8 cut(s) 9, 150, 223, 262, 538, 615, 1135, 1174
Hpy188III TCNNGA 8 cut(s) 71, 128, 426, 945, 980, 1028, 1154, 1355
Hpy8I GTNNAC 3 cut(s) 175, 531, 1115
HpyAV CCTTC 5 cut(s) 61, 356, 680, 770, 833
HpyCH4III ACNGT 5 cut(s) 157, 625, 961, 970, 1266
HpyCH4IV ACGT 3 cut(s) 477, 1068, 1117
HpyCH4V TGCA 9 cut(s) 190, 386, 659, 745, 809, 905, 1097, 1193, 1411
HpyF10VI GCNNNNNNNGC 9 cut(s) 467, 665, 751, 809, 815, 849, 896, 1014, 1199
HpyF3I CTNAG 3 cut(s) 22, 64, 535
HpySE526I ACGT 3 cut(s) 477, 1068, 1117
Hsp92II CATG 6 cut(s) 74, 857, 935, 1259, 1273, 1311
Kpn2I TCCGGA 1 cut(s) 425
Kzo9I GATC 5 cut(s) 249, 376, 509, 947, 1156
LguI GCTCTTC 1 cut(s) 534
LmnI GCTCC 3 cut(s) 53, 982, 995
Lsp1109I GCAGC 4 cut(s) 643, 821, 889, 911
LweI GCATC 6 cut(s) 322, 400, 643, 877, 1017, 1180
MaeI CTAG 4 cut(s) 455, 917, 1014, 1028
MaeII ACGT 3 cut(s) 477, 1068, 1117
MaeIII GTNAC 6 cut(s) 241, 341, 671, 796, 1310, 1319
MalI GATC 5 cut(s) 251, 378, 511, 949, 1158
MboI GATC 5 cut(s) 249, 376, 509, 947, 1156
MboII GAAGA 8 cut(s) 86, 92, 153, 551, 628, 1067, 1074, 1349
MflI RGATCY 4 cut(s) 249, 376, 947, 1156
MhlI GDGCHC 2 cut(s) 39, 761
MlsI TGGCCA 1 cut(s) 1274
MluCI AATT 9 cut(s) 11, 27, 740, 908, 1032, 1074, 1098, 1136, 1143
MluNI TGGCCA 1 cut(s) 1274
MmeI TCCRAC 1 cut(s) 370
MnlI CCTC 6 cut(s) 97, 322, 544, 763, 842, 1357
Mox20I TGGCCA 1 cut(s) 1274
MroI TCCGGA 1 cut(s) 425
MscI TGGCCA 1 cut(s) 1274
MseI TTAA 1 cut(s) 1223
MslI CAYNNNNRTG 5 cut(s) 75, 408, 827, 858, 1411
Msp20I TGGCCA 1 cut(s) 1274
MspA1I CMGCKG 2 cut(s) 564, 902
MspI CCGG 1 cut(s) 426
MspR9I CCNGG 3 cut(s) 247, 710, 993
MvaI CCWGG 3 cut(s) 247, 710, 993
MwoI GCNNNNNNNGC 9 cut(s) 467, 665, 751, 809, 815, 849, 896, 1014, 1199
NdeII GATC 5 cut(s) 249, 376, 509, 947, 1156
NheI GCTAGC 1 cut(s) 916
NlaIII CATG 6 cut(s) 74, 857, 935, 1259, 1273, 1311
NlaIV GGNNCC 3 cut(s) 759, 997, 1158
NmeAIII GCCGAG 1 cut(s) 1271
NspI RCATGY 1 cut(s) 935
PagI TCATGA 1 cut(s) 70
PaqCI CACCTGC 1 cut(s) 238
PciI ACATGT 1 cut(s) 931
PciSI GCTCTTC 1 cut(s) 534
PfeI GAWTC 4 cut(s) 285, 558, 941, 1259
PfoI TCCNGGA 2 cut(s) 708, 991
PkrI GCNGC 5 cut(s) 578, 658, 811, 901, 904
PscI ACATGT 1 cut(s) 931
Psp1406I AACGTT 1 cut(s) 1068
Psp6I CCWGG 3 cut(s) 245, 708, 991
PspFI CCCAGC 1 cut(s) 814
PspGI CCWGG 3 cut(s) 245, 708, 991
PspN4I GGNNCC 3 cut(s) 759, 997, 1158
PspOMI GGGCCC 1 cut(s) 757
PspPI GGNCC 2 cut(s) 757, 758
PstI CTGCAG 2 cut(s) 388, 907
PsuI RGATCY 4 cut(s) 249, 376, 947, 1156
PvuII CAGCTG 2 cut(s) 564, 902
RsaI GTAC 3 cut(s) 257, 480, 967
RsaNI GTAC 3 cut(s) 256, 479, 966
RseI CAYNNNNRTG 5 cut(s) 75, 408, 827, 858, 1411
SapI GCTCTTC 1 cut(s) 534
SaqAI TTAA 1 cut(s) 1223
SatI GCNGC 5 cut(s) 577, 657, 810, 900, 903
Sau3AI GATC 5 cut(s) 249, 376, 509, 947, 1156
Sau96I GGNCC 2 cut(s) 757, 758
ScrFI CCNGG 3 cut(s) 247, 710, 993
SduI GDGCHC 2 cut(s) 39, 761
SfaNI GCATC 6 cut(s) 322, 400, 643, 877, 1017, 1180
SfcI CTRYAG 4 cut(s) 384, 462, 903, 1104
SmiMI CAYNNNNRTG 5 cut(s) 75, 408, 827, 858, 1411
SmlI CTYRAG 1 cut(s) 139
SmoI CTYRAG 1 cut(s) 139
Sse9I AATT 9 cut(s) 11, 27, 740, 908, 1032, 1074, 1098, 1136, 1143
SsiI CCGC 3 cut(s) 577, 587, 857
SspMI CTAG 4 cut(s) 455, 917, 1014, 1028
StyD4I CCNGG 3 cut(s) 245, 708, 991
TaaI ACNGT 5 cut(s) 157, 625, 961, 970, 1266
TaiI ACGT 3 cut(s) 480, 1071, 1120
TaqI TCGA 2 cut(s) 181, 1208
TasI AATT 9 cut(s) 11, 27, 740, 908, 1032, 1074, 1098, 1136, 1143
TatI WGTACW 1 cut(s) 255
TauI GCSGC 1 cut(s) 579
TfiI GAWTC 4 cut(s) 285, 558, 941, 1259
Tru1I TTAA 1 cut(s) 1223
Tru9I TTAA 1 cut(s) 1223
TscAI CASTG 3 cut(s) 160, 519, 1269
TseI GCWGC 4 cut(s) 656, 809, 899, 902
TspGWI ACGGA 1 cut(s) 160
TspRI CASTG 3 cut(s) 160, 519, 1269
XapI RAATTY 2 cut(s) 11, 1136
XbaI TCTAGA 1 cut(s) 1027
XceI RCATGY 1 cut(s) 935
XcmI CCANNNNNNNNNTGG 1 cut(s) 706
XspI CTAG 4 cut(s) 455, 917, 1014, 1028
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.