Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0007806

Physical Location & Seq

Genomic Coordinates Forward (+)

3600569 .. 3606184

Gene Structure 5616 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1039100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGGGAAGCGAAGGCCAAGCTTCGACCTCCTCCAACGCCTTCTCCTTCATATCGAAAGGGTGGAGGGAAGTGAAGGACTCGGCCGACGCGGATCTCCAATTGATGAAGCACCGGGCCAACGAGTTCAAGAACCTCGCGACGTCGTTCGACCGCGAGCTCGAGAACCTGTTCAAGTTCAACTCCGCGTCGTCGGCGGGGATTCGGTCGTCTTCGGCGTCTCTGCCGGCGGAGATAGACTTCGTCAAGAAGCTGCAGCCGAAGCTGTCTGAGTTTCGGAGAGTGTATTCGTCGCCGGGATTCAGCAAGAAGGTTCTGGACAAGTGGAGCCCCAGGTCGAGGATCCGGATCGATTTGTCGGAGATAAAGAATGCGCTGGTGTCGGAGGTGGAGAACAGGGATGGGGTTATGGAATTTAATAGGGGTATTAGGGGAAGGCCATTGAAGTTCAGTGAGTTTTGGGGCGAGTGGAAGGGGGAGGGTAAGGAGGAGGATGAGGAGAGACAGTCTAACAAGGACTGGGAGCCAATTCGGGCGTTGAAGACGAGATTGAAAGAGTTCGAAAAGCGGGAATTTCTCGGTGGATTTAAGAACAGTGACTTTGTGGAGAAATTCAAGTCCAGCTTGAAATCAATTTACAAGGAGCCTGAGGAGTCAAAGGCAGTACCTCCTTTGGATGTGACAGAACTTTTGGCATGTTTGGTTAGGCAATCTGAGCCTTTCCTGGATCAACTTGGCGTTAAGAGAAATGTGTGTGAGAAAATAGTGGAAAGCTTGTGCAGCAAACACAAGAACCAAGTTCTGCACTCACATTCTTCTGGAGAGTCATCTGTTCTAGACAGTGAGAACATAAATGATGAATTAGATTTAAGGATAGCCAGCGTCATCCAAAGCACAGGGCATTCTTATGATGGTGGGTTTTGGACAGATCATGCAAAGCATGAACCGTCAGATGAGAAAAGACATGTTGCTATTGTCACAACTGCTAGTCTTCCTTGGATGACAGGAACAGCAGTGAATCCACTGTTTCGTGCTGCATATCTTGCAGAGTCTGCAAAACAGAATGTGACATTATTAGTTCCATGGCTTTGTAAATCAGATCAAGAACTTGTATATCCTAGCAACATCACATTTACTTCACCAGAAGAGCAGGAAATTTATATCCGTAACTGGCTTGAGGAAAGGATTGGCTTTAAAGCTGACTTTAAGATATCATTTTATCCAGGAAAGTTTTCAAAAGAAAGGCGAAGCATTTTACCAGCTGGGGACACTTCTCAGTTTATTCCGTCCAAGGATGCTGACATTGCTATTCTGGAAGAACCGGAACACTTGAATTGGTATCATCATGGTAAACGTTGGACCGATAAATTTAACCATGTTGTTGGTGTTGTTCACACAAATTACTTGGAATATATCAAGAGGGAGAAGAATGGCGCTCTCCAAGCCTTCTTTGTGAAGCACATAAACAATTGGGTTACAAGAGCATACTGCGACAAGGTTCTTCGCCTTTCTTCTGCCACACAGGATTTACCAAAGTCTGTAATTTGCAACGTCCATGGTGTGAATCCCAAGTTCTTGAGAATTGGAGAAAAGGTGGCTGCGGAAAGGGAACTTGGACAGGAAGCGTTCTCAAAAGGAGCATATTTCTTAGGGAAGATGGTCTGGGCAAAGGGATACCGTGAGCTCATAGATTTGTTGGCAAAGCACAAGAGTGACCTTGATGGCTTCAAGTTGGACGTGTATGGAAATGGAGAGGATGCCAATGAAGTTCAGAGTACAGCTAAAAGCTTGGATTTAAATCTCAACTTTCTGAAAGGAAGAGACCATGCAGATGATTCTCTTCACGGGTACAAAGTCTTCATAAATCCCAGCGTTAGCGATGTGCTGTGCACGGCTACTGCTGAGGCGCTTGCCATGGGAAAGTTTGTAATTTGTGCGGATCATCCATCAAATGAGTTTTTCAGATCATTTCCTAATTGCTTGACCTACGAAACGTCCGAGGAATTTGTTGCCAAAGTGAAGGAAGCAATGGAAAACGAACCTCAGCCCCTCACTCCCGAACAACGATACCATCTTTCATGGGAAGCCGCAACCCAGAGGTTCATGGAGTATTCTGAGCTTGACAAAGTCTTGAACAAAGACAACAATGGTGCGAAATCAACCATGGGGAGCCGAAAGAGGATCCCAAAATCAGCATCAATGCCTAGCTTGACCGGTATGGTTGACGGAGGTTTGGCATTTGCCCACTACTGTCTCACCGGTAATGAATTCCTTAGACTATGCACTGGAGCAATTCCGGGAACCCGATACTACGACAAGCAACACTGTAAAGACCTTCGTCTCTTACCTCCCCAGGTAGAAAATCCAATATACGGGTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0006643 GO:0006664 GO:0006725 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008194 GO:0008378 GO:0008610 GO:0009058 GO:0009247 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009698 GO:0009699 GO:0009707 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009808 GO:0009809 GO:0009867 GO:0009941 GO:0009987 GO:0010033 GO:0010109 GO:0016020 GO:0016053 GO:0016740 GO:0016757 GO:0016758 GO:0019222 GO:0019374 GO:0019375 GO:0019438 GO:0019748 GO:0019752 GO:0019867 GO:0023052 GO:0031090 GO:0031323 GO:0031407 GO:0031408 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032787 GO:0032870 GO:0035250 GO:0042170 GO:0042221 GO:0042548 GO:0042550 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043467 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046394 GO:0046467 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0072330 GO:0098588 GO:0098805 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576 GO:1901700 GO:1901701 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko01100 map00561 map01100

Pfam Domains

Protein Families

Glyco_trans_1_4 Glycos_transf_1

Protein Analysis

793

Amino Acids

89.93

Weight (kDa)

6.65

Isoelectric Point (pI)

41.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glycos_transf_1	PF00534	547 - 681	2.6e-12	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	547 - 678	4.6e-11	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007806)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11670 AT3G11670
fragaria_vesca	FvH4_6g20320
malus_domestica	MD12G1040400.v1.1 MD14G1039100.v1.1
prunus_persica	Prupe.7G094500_v2.0.a1
pyrus_communis	pycom12g03450 pycom14g03360
rosa_chinensis	RchiOBHm_Chr3g0475941
rosa_laevigata	RLG00000023798
rosa_multiflora	Rmu_sc0000441.1_g000087 Rmu_sc0000596.1_g000001 Rmu_sc0001809.1_g000063
rosa_roxburghii	Rroxscaffold_6G00405710
rosa_rugosa	Rorug03G0152000 Rorug03G0152100 Rorug03G0152100 Rorug03G0152200
rosa_samantha	Rh2BG524200 Rh3AG203000 Rh3BG232800 Rh3CG228300 Rh3DG228500
rosa_wichuraiana	Rw3G018460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	143
AccII	CGCG	4 cut(s)	89, 137, 153, 185
AccIII	TCCGGA	1 cut(s)	342
AciI	CCGC	9 cut(s)	89, 151, 183, 194, 227, 565, 1598, 1934, 2085
AclI	AACGTT	1 cut(s)	1351
AclWI	GGATC	8 cut(s)	99, 334, 347, 353, 732, 1944, 2173, 2186
AcoI	YGGCCR	1 cut(s)	81
AcsI	RAATTY	7 cut(s)	410, 569, 608, 1152, 1364, 2000, 2264
AcyI	GRCGYC	2 cut(s)	140, 215
AfaI	GTAC	3 cut(s)	663, 1774, 1847
AfiI	CCNNNNNNNGG	2 cut(s)	336, 2369
AflIII	ACRYGT	2 cut(s)	961, 1734
AgeI	ACCGGT	2 cut(s)	2210, 2255
AjiI	CACGTC	1 cut(s)	1735
AjnI	CCWGG	4 cut(s)	329, 720, 1219, 2349
AjuI	GAANNNNNNNTTGG	2 cut(s)	1593, 1625
AleI	CACNNNNGTG	1 cut(s)	1707
Alw21I	GWGCWC	3 cut(s)	159, 1683, 1889
Alw26I	GTCTC	5 cut(s)	222, 493, 1812, 2255, 2342
Alw44I	GTGCAC	1 cut(s)	1885
AlwI	GGATC	8 cut(s)	99, 334, 347, 353, 732, 1944, 2173, 2186
AlwNI	CAGNNNCTG	1 cut(s)	1049
Ama87I	CYCGRG	1 cut(s)	158
Aor13HI	TCCGGA	1 cut(s)	342
AoxI	GGCC	4 cut(s)	13, 81, 114, 434
ApaLI	GTGCAC	1 cut(s)	1885
ApeKI	GCWGC	5 cut(s)	250, 253, 777, 1031, 1595
ApoI	RAATTY	7 cut(s)	410, 569, 608, 1152, 1364, 2000, 2264
ArsI	GACNNNNNNTTYG	2 cut(s)	670, 702
AsiGI	ACCGGT	2 cut(s)	2210, 2255
Asp700I	GAANNNNTTC	3 cut(s)	167, 554, 1228
AspLEI	GCGC	3 cut(s)	373, 1433, 1906
AspS9I	GGNCC	2 cut(s)	114, 1356
AsuC2I	CCSGG	3 cut(s)	113, 294, 2295
AsuHPI	GGTGA	2 cut(s)	1128, 2245
AsuII	TTCGAA	1 cut(s)	558
AvaI	CYCGRG	1 cut(s)	158
AvaII	GGWCC	1 cut(s)	1356
AxyI	CCTNAGG	1 cut(s)	645
BaeGI	GKGCMC	1 cut(s)	1889
BamHI	GGATCC	2 cut(s)	339, 2178
BanII	GRGCYC	3 cut(s)	159, 329, 1683
BarI	GAAGNNNNNNTAC	2 cut(s)	1838, 1870
BbsI	GAAGAC	4 cut(s)	201, 545, 980, 1846
Bbv12I	GWGCWC	3 cut(s)	159, 1683, 1889
BbvCI	CCTCAGC	2 cut(s)	1899, 2040
BbvI	GCAGC	5 cut(s)	237, 265, 789, 1018, 1582
BccI	CCATC	6 cut(s)	392, 902, 1648, 1712, 1951, 2076
BceAI	ACGGC	1 cut(s)	1905
BciT130I	CCWGG	4 cut(s)	331, 722, 1221, 2351
BciVI	GTATCC	1 cut(s)	1664
BcnI	CCSGG	3 cut(s)	113, 294, 2295
BcoDI	GTCTC	5 cut(s)	222, 493, 1812, 2255, 2342
BfaI	CTAG	4 cut(s)	833, 984, 1116, 2202
BfmI	CTRYAG	1 cut(s)	251
BfoI	RGCGCY	2 cut(s)	1434, 1907
BfuI	GTATCC	1 cut(s)	1664
BisI	GCNGC	6 cut(s)	251, 254, 778, 1032, 1596, 2085
BlsI	GCNGC	6 cut(s)	252, 255, 779, 1033, 1597, 2086
Bme1390I	CCNGG	7 cut(s)	113, 294, 331, 722, 1221, 2295, 2351
Bme18I	GGWCC	1 cut(s)	1356
BmeT110I	CYCGRG	1 cut(s)	158
BmgBI	CACGTC	1 cut(s)	1735
BmgT120I	GGNCC	2 cut(s)	114, 1356
BmiI	GGNNCC	7 cut(s)	326, 341, 522, 642, 2168, 2180, 2299
BmrFI	CCNGG	7 cut(s)	113, 294, 331, 722, 1221, 2295, 2351
BmrI	ACTGGG	1 cut(s)	526
BmsI	GCATC	3 cut(s)	1282, 1744, 2201
BmuI	ACTGGG	1 cut(s)	526
BoxI	GACNNNNGTC	1 cut(s)	2334
BpiI	GAAGAC	4 cut(s)	201, 545, 980, 1846
BpmI	CTGGAG	2 cut(s)	837, 2304
Bpu10I	CCTNAGC	2 cut(s)	1899, 2040
Bpu14I	TTCGAA	1 cut(s)	558
BpuEI	CTTGAG	2 cut(s)	1193, 1594
BpuMI	CCSGG	3 cut(s)	113, 294, 2295
Bsa29I	ATCGAT	1 cut(s)	348
BsaBI	GATNNNNATC	2 cut(s)	344, 1794
BsaHI	GRCGYC	2 cut(s)	140, 215
BsaI	GGTCTC	1 cut(s)	1812
BsaJI	CCNNGG	9 cut(s)	329, 992, 1079, 1287, 1552, 1911, 1995, 2160, 2349
BsaWI	WCCGGW	4 cut(s)	342, 1318, 2210, 2255
BsaXI	ACNNNNNCTCC	6 cut(s)	26, 56, 488, 518, 1575, 1605
Bsc4I	CCNNNNNNNGG	2 cut(s)	336, 2369
Bse118I	RCCGGY	3 cut(s)	223, 2210, 2255
Bse1I	ACTGG	3 cut(s)	521, 1172, 2287
Bse21I	CCTNAGG	1 cut(s)	645
Bse3DI	GCAATG	2 cut(s)	1299, 2031
Bse8I	GATNNNNATC	2 cut(s)	344, 1794
BseAI	TCCGGA	1 cut(s)	342
BseBI	CCWGG	4 cut(s)	331, 722, 1221, 2351
BseCI	ATCGAT	1 cut(s)	348
BseDI	CCNNGG	9 cut(s)	329, 992, 1079, 1287, 1552, 1911, 1995, 2160, 2349
BseGI	GGATG	8 cut(s)	403, 496, 679, 882, 1002, 1297, 1759, 1939
BseJI	GATNNNNATC	2 cut(s)	344, 1794
BseLI	CCNNNNNNNGG	2 cut(s)	336, 2369
BseMI	GCAATG	2 cut(s)	1299, 2031
BseMII	CTCAG	7 cut(s)	258, 636, 702, 1286, 1890, 2054, 2103
BseNI	ACTGG	3 cut(s)	521, 1172, 2287
BseRI	GAGGAG	4 cut(s)	19, 500, 509, 662
BseSI	GKGCMC	1 cut(s)	1889
BseX3I	CGGCCG	1 cut(s)	81
BseXI	GCAGC	5 cut(s)	237, 265, 789, 1018, 1582
BseYI	CCCAGC	2 cut(s)	1259, 1865
BsgI	GTGCAG	2 cut(s)	785, 796
Bsh1236I	CGCG	4 cut(s)	89, 137, 153, 185
Bsh1285I	CGRYCG	3 cut(s)	84, 151, 206
BshFI	GGCC	4 cut(s)	15, 83, 116, 436
BshTI	ACCGGT	2 cut(s)	2210, 2255
BshVI	ATCGAT	1 cut(s)	348
BsiEI	CGRYCG	3 cut(s)	84, 151, 206
BsiHKAI	GWGCWC	3 cut(s)	159, 1683, 1889
BsiHKCI	CYCGRG	1 cut(s)	158
BsiSI	CCGG	8 cut(s)	112, 224, 293, 343, 1319, 2211, 2256, 2294
BslFI	GGGAC	1 cut(s)	1277
BslI	CCNNNNNNNGG	2 cut(s)	336, 2369
BsmAI	GTCTC	5 cut(s)	222, 493, 1812, 2255, 2342
BsmBI	CGTCTC	2 cut(s)	222, 2342
BsmFI	GGGAC	1 cut(s)	1277
BsmI	GAATGC	2 cut(s)	373, 898
BsnI	GGCC	4 cut(s)	15, 83, 116, 436
Bso31I	GGTCTC	1 cut(s)	1812
BsoBI	CYCGRG	1 cut(s)	158
Bsp119I	TTCGAA	1 cut(s)	558
Bsp1286I	GDGCHC	4 cut(s)	159, 329, 1683, 1889
Bsp13I	TCCGGA	1 cut(s)	342
Bsp143I	GATC	9 cut(s)	91, 339, 345, 724, 925, 1096, 1936, 1961, 2178
Bsp19I	CCATGG	4 cut(s)	1079, 1552, 1911, 2160
Bsp68I	TCGCGA	1 cut(s)	137
BspACI	CCGC	9 cut(s)	89, 151, 183, 194, 227, 565, 1598, 1934, 2085
BspANI	GGCC	4 cut(s)	15, 83, 116, 436
BspCNI	CTCAG	7 cut(s)	259, 637, 703, 1285, 1891, 2053, 2104
BspDI	ATCGAT	1 cut(s)	348
BspEI	TCCGGA	1 cut(s)	342
BspFNI	CGCG	4 cut(s)	89, 137, 153, 185
BspLI	GGNNCC	7 cut(s)	326, 341, 522, 642, 2168, 2180, 2299
BspMAI	CTGCAG	1 cut(s)	255
BspPI	GGATC	8 cut(s)	99, 334, 347, 353, 732, 1944, 2173, 2186
BspQI	GCTCTTC	1 cut(s)	1137
BspT104I	TTCGAA	1 cut(s)	558
BspTNI	GGTCTC	1 cut(s)	1812
BsrDI	GCAATG	2 cut(s)	1299, 2031
BsrFI	RCCGGY	3 cut(s)	223, 2210, 2255
BsrI	ACTGG	3 cut(s)	521, 1172, 2287
BssAI	RCCGGY	3 cut(s)	223, 2210, 2255
BssECI	CCNNGG	9 cut(s)	329, 992, 1079, 1287, 1552, 1911, 1995, 2160, 2349
BssMI	GATC	9 cut(s)	91, 339, 345, 724, 925, 1096, 1936, 1961, 2178
BssNI	GRCGYC	2 cut(s)	140, 215
BssT1I	CCWWGG	6 cut(s)	992, 1079, 1287, 1552, 1911, 2160
Bst2UI	CCWGG	4 cut(s)	331, 722, 1221, 2351
Bst4CI	ACNGT	8 cut(s)	504, 593, 839, 945, 1023, 1676, 2249, 2324
Bst6I	CTCTTC	3 cut(s)	1137, 1810, 1842
BstACI	GRCGYC	2 cut(s)	140, 215
BstAPI	GCANNNNNTGC	2 cut(s)	1040, 1049
BstBI	TTCGAA	1 cut(s)	558
BstC8I	GCNNGC	4 cut(s)	155, 225, 877, 1908
BstDEI	CTNAG	9 cut(s)	267, 645, 711, 1272, 1645, 1899, 2040, 2112, 2270
BstDSI	CCRYGG	4 cut(s)	1079, 1552, 1911, 2160
BstF5I	GGATG	8 cut(s)	403, 496, 679, 882, 1002, 1297, 1759, 1939
BstFNI	CGCG	4 cut(s)	89, 137, 153, 185
BstH2I	RGCGCY	2 cut(s)	1434, 1907
BstHHI	GCGC	3 cut(s)	373, 1433, 1906
BstKTI	GATC	9 cut(s)	94, 342, 348, 727, 928, 1099, 1939, 1964, 2181
BstMAI	GTCTC	5 cut(s)	222, 493, 1812, 2255, 2342
BstMBI	GATC	9 cut(s)	91, 339, 345, 724, 925, 1096, 1936, 1961, 2178
BstMCI	CGRYCG	3 cut(s)	84, 151, 206
BstMWI	GCNNNNNNNGC	8 cut(s)	191, 259, 712, 777, 1040, 1049, 1301, 1439
BstNI	CCWGG	4 cut(s)	331, 722, 1221, 2351
BstNSI	RCATGY	2 cut(s)	696, 965
BstPAI	GACNNNNGTC	1 cut(s)	2334
BstSCI	CCNGG	7 cut(s)	111, 292, 329, 720, 1219, 2293, 2349
BstSFI	CTRYAG	1 cut(s)	251
BstSLI	GKGCMC	1 cut(s)	1889
BstUI	CGCG	4 cut(s)	89, 137, 153, 185
BstV1I	GCAGC	5 cut(s)	237, 265, 789, 1018, 1582
BstV2I	GAAGAC	4 cut(s)	201, 545, 980, 1846
BstX2I	RGATCY	3 cut(s)	91, 339, 2178
BstXI	CCANNNNNNTGG	1 cut(s)	1379
BstYI	RGATCY	3 cut(s)	91, 339, 2178
BstZI	CGGCCG	1 cut(s)	81
Bsu15I	ATCGAT	1 cut(s)	348
Bsu36I	CCTNAGG	1 cut(s)	645
BsuI	GTATCC	1 cut(s)	1664
BsuRI	GGCC	4 cut(s)	15, 83, 116, 436
BsuTUI	ATCGAT	1 cut(s)	348
BtgI	CCRYGG	4 cut(s)	1079, 1552, 1911, 2160
BtgZI	GCGATG	1 cut(s)	1890
BtrI	CACGTC	1 cut(s)	1735
BtsCI	GGATG	8 cut(s)	403, 496, 679, 882, 1002, 1297, 1759, 1939
BtsI	GCAGTG	1 cut(s)	1017
BtsIMutI	CAGTG	7 cut(s)	454, 598, 844, 1017, 1019, 2280, 2320
BtuMI	TCGCGA	1 cut(s)	137
Cac8I	GCNNGC	4 cut(s)	155, 225, 877, 1908
CaiI	CAGNNNCTG	1 cut(s)	1049
CfoI	GCGC	3 cut(s)	373, 1433, 1906
Cfr10I	RCCGGY	3 cut(s)	223, 2210, 2255
Cfr13I	GGNCC	2 cut(s)	114, 1356
ClaI	ATCGAT	1 cut(s)	348
CseI	GACGC	4 cut(s)	95, 174, 204, 868
Csp6I	GTAC	3 cut(s)	662, 1773, 1846
CspAI	ACCGGT	2 cut(s)	2210, 2255
CviQI	GTAC	3 cut(s)	662, 1773, 1846
DdeI	CTNAG	9 cut(s)	267, 645, 711, 1272, 1645, 1899, 2040, 2112, 2270
DpnI	GATC	9 cut(s)	93, 341, 347, 726, 927, 1098, 1938, 1963, 2180
DpnII	GATC	9 cut(s)	91, 339, 345, 724, 925, 1096, 1936, 1961, 2178
DraI	TTTAAA	2 cut(s)	1192, 1794
EaeI	YGGCCR	1 cut(s)	81
EagI	CGGCCG	1 cut(s)	81
Eam1104I	CTCTTC	3 cut(s)	1137, 1810, 1842
EarI	CTCTTC	3 cut(s)	1137, 1810, 1842
EciI	GGCGGA	1 cut(s)	242
Ecl136II	GAGCTC	2 cut(s)	157, 1681
EclXI	CGGCCG	1 cut(s)	81
Eco130I	CCWWGG	6 cut(s)	992, 1079, 1287, 1552, 1911, 2160
Eco24I	GRGCYC	3 cut(s)	159, 329, 1683
Eco31I	GGTCTC	1 cut(s)	1812
Eco32I	GATATC	1 cut(s)	1209
Eco47I	GGWCC	1 cut(s)	1356
Eco52I	CGGCCG	1 cut(s)	81
Eco53kI	GAGCTC	2 cut(s)	157, 1681
Eco81I	CCTNAGG	1 cut(s)	645
Eco88I	CYCGRG	1 cut(s)	158
EcoICRI	GAGCTC	2 cut(s)	157, 1681
EcoRI	GAATTC	1 cut(s)	2264
EcoRII	CCWGG	4 cut(s)	329, 720, 1219, 2349
EcoRV	GATATC	1 cut(s)	1209
EcoT14I	CCWWGG	6 cut(s)	992, 1079, 1287, 1552, 1911, 2160
EcoT38I	GRGCYC	3 cut(s)	159, 329, 1683
ErhI	CCWWGG	6 cut(s)	992, 1079, 1287, 1552, 1911, 2160
Esp3I	CGTCTC	2 cut(s)	222, 2342
FalI	AAGNNNNNCTT	2 cut(s)	605, 637
FaqI	GGGAC	1 cut(s)	1277
FauI	CCCGC	2 cut(s)	187, 558
Fnu4HI	GCNGC	6 cut(s)	251, 254, 778, 1032, 1596, 2085
FokI	GGATG	8 cut(s)	410, 503, 686, 869, 1009, 1304, 1766, 1926
FriOI	GRGCYC	3 cut(s)	159, 329, 1683
Fsp4HI	GCNGC	6 cut(s)	251, 254, 778, 1032, 1596, 2085
FspBI	CTAG	4 cut(s)	833, 984, 1116, 2202
GlaI	GCGC	3 cut(s)	372, 1432, 1905
GluI	GCNGC	6 cut(s)	251, 254, 778, 1032, 1596, 2085
GsaI	CCCAGC	2 cut(s)	1263, 1869
GsuI	CTGGAG	2 cut(s)	837, 2304
HaeII	RGCGCY	2 cut(s)	1434, 1907
HaeIII	GGCC	4 cut(s)	15, 83, 116, 436
HapII	CCGG	8 cut(s)	112, 224, 293, 343, 1319, 2211, 2256, 2294
HgaI	GACGC	4 cut(s)	95, 174, 204, 868
HhaI	GCGC	3 cut(s)	373, 1433, 1906
Hin1I	GRCGYC	2 cut(s)	140, 215
Hin6I	GCGC	3 cut(s)	371, 1431, 1904
HinP1I	GCGC	3 cut(s)	371, 1431, 1904
HincII	GTYRAC	1 cut(s)	2221
HindII	GTYRAC	1 cut(s)	2221
HindIII	AAGCTT	3 cut(s)	18, 769, 1783
HinfI	GANTC	9 cut(s)	77, 199, 297, 650, 821, 1015, 1046, 1561, 1832
HpaII	CCGG	8 cut(s)	112, 224, 293, 343, 1319, 2211, 2256, 2294
HphI	GGTGA	2 cut(s)	1128, 2245
Hpy166II	GTNNAC	4 cut(s)	1349, 1390, 1887, 2221
Hpy8I	GTNNAC	4 cut(s)	1349, 1390, 1887, 2221
Hpy99I	CGWCG	6 cut(s)	89, 142, 145, 190, 193, 292
HpyCH4III	ACNGT	8 cut(s)	504, 593, 839, 945, 1023, 1676, 2249, 2324
HpyCH4IV	ACGT	5 cut(s)	140, 1351, 1548, 1734, 1991
HpyF10VI	GCNNNNNNNGC	8 cut(s)	191, 259, 712, 777, 1040, 1049, 1301, 1439
HpyF3I	CTNAG	9 cut(s)	267, 645, 711, 1272, 1645, 1899, 2040, 2112, 2270
HpySE526I	ACGT	5 cut(s)	140, 1351, 1548, 1734, 1991
Hsp92I	GRCGYC	2 cut(s)	140, 215
HspAI	GCGC	3 cut(s)	371, 1431, 1904
Kpn2I	TCCGGA	1 cut(s)	342
KroI	GCCGGC	1 cut(s)	223
KroNI	GCCGGC	1 cut(s)	225
Kzo9I	GATC	9 cut(s)	91, 339, 345, 724, 925, 1096, 1936, 1961, 2178
LguI	GCTCTTC	1 cut(s)	1137
LmnI	GCTCC	6 cut(s)	324, 520, 640, 1634, 2166, 2285
Lsp1109I	GCAGC	5 cut(s)	237, 265, 789, 1018, 1582
LweI	GCATC	3 cut(s)	1282, 1744, 2201
MaeI	CTAG	4 cut(s)	833, 984, 1116, 2202
MaeII	ACGT	5 cut(s)	140, 1351, 1548, 1734, 1991
MaeIII	GTNAC	7 cut(s)	593, 676, 973, 1063, 1163, 1471, 1709
MalI	GATC	9 cut(s)	93, 341, 347, 726, 927, 1098, 1938, 1963, 2180
MboI	GATC	9 cut(s)	91, 339, 345, 724, 925, 1096, 1936, 1961, 2178
MfeI	CAATTG	2 cut(s)	98, 1465
MflI	RGATCY	3 cut(s)	91, 339, 2178
MhlI	GDGCHC	4 cut(s)	159, 329, 1683, 1889
MlyI	GAGTC	4 cut(s)	71, 659, 830, 1055
MmeI	TCCRAC	5 cut(s)	57, 336, 360, 1334, 1710
MroI	TCCGGA	1 cut(s)	342
MroNI	GCCGGC	1 cut(s)	223
MroXI	GAANNNNTTC	3 cut(s)	167, 554, 1228
MseI	TTAA	8 cut(s)	414, 585, 738, 866, 1191, 1203, 1368, 1793
MslI	CAYNNNNRTG	3 cut(s)	903, 1707, 1827
MspA1I	CMGCKG	1 cut(s)	1259
MspI	CCGG	8 cut(s)	112, 224, 293, 343, 1319, 2211, 2256, 2294
MspR9I	CCNGG	7 cut(s)	113, 294, 331, 722, 1221, 2295, 2351
MunI	CAATTG	2 cut(s)	98, 1465
Mva1269I	GAATGC	2 cut(s)	373, 898
MvaI	CCWGG	4 cut(s)	331, 722, 1221, 2351
MvnI	CGCG	4 cut(s)	89, 137, 153, 185
MwoI	GCNNNNNNNGC	8 cut(s)	191, 259, 712, 777, 1040, 1049, 1301, 1439
NaeI	GCCGGC	1 cut(s)	225
NciI	CCSGG	3 cut(s)	113, 294, 2295
NcoI	CCATGG	4 cut(s)	1079, 1552, 1911, 2160
NdeII	GATC	9 cut(s)	91, 339, 345, 724, 925, 1096, 1936, 1961, 2178
NgoMIV	GCCGGC	1 cut(s)	223
NlaIV	GGNNCC	7 cut(s)	326, 341, 522, 642, 2168, 2180, 2299
NmeAIII	GCCGAG	1 cut(s)	59
NmuCI	GTSAC	5 cut(s)	593, 676, 973, 1063, 1709
NruI	TCGCGA	1 cut(s)	137
NspI	RCATGY	2 cut(s)	696, 965
NspV	TTCGAA	1 cut(s)	558
OliI	CACNNNNGTG	1 cut(s)	1707
PaeR7I	CTCGAG	1 cut(s)	158
PciI	ACATGT	1 cut(s)	961
PciSI	GCTCTTC	1 cut(s)	1137
PcsI	WCGNNNNNNNCGW	2 cut(s)	212, 1992
PctI	GAATGC	2 cut(s)	373, 898
PdiI	GCCGGC	1 cut(s)	225
PdmI	GAANNNNTTC	3 cut(s)	167, 554, 1228
PfeI	GAWTC	5 cut(s)	199, 297, 1015, 1561, 1832
PflFI	GACNNNGTC	2 cut(s)	239, 2123
PfoI	TCCNGGA	3 cut(s)	720, 1219, 2293
PinAI	ACCGGT	2 cut(s)	2210, 2255
PkrI	GCNGC	6 cut(s)	252, 255, 779, 1033, 1597, 2086
PleI	GAGTC	4 cut(s)	71, 658, 829, 1054
PpsI	GAGTC	4 cut(s)	71, 658, 829, 1054
PscI	ACATGT	1 cut(s)	961
PshAI	GACNNNNGTC	1 cut(s)	2334
Psp124BI	GAGCTC	2 cut(s)	159, 1683
Psp1406I	AACGTT	1 cut(s)	1351
Psp6I	CCWGG	4 cut(s)	329, 720, 1219, 2349
PspFI	CCCAGC	2 cut(s)	1259, 1865
PspGI	CCWGG	4 cut(s)	329, 720, 1219, 2349
PspN4I	GGNNCC	7 cut(s)	326, 341, 522, 642, 2168, 2180, 2299
PspPI	GGNCC	2 cut(s)	114, 1356
PstI	CTGCAG	1 cut(s)	255
PstNI	CAGNNNCTG	1 cut(s)	1049
PsuI	RGATCY	3 cut(s)	91, 339, 2178
PsyI	GACNNNGTC	2 cut(s)	239, 2123
PvuII	CAGCTG	1 cut(s)	1259
RruI	TCGCGA	1 cut(s)	137
RsaI	GTAC	3 cut(s)	663, 1774, 1847
RsaNI	GTAC	3 cut(s)	662, 1773, 1846
RseI	CAYNNNNRTG	3 cut(s)	903, 1707, 1827
SacI	GAGCTC	2 cut(s)	159, 1683
SapI	GCTCTTC	1 cut(s)	1137
SaqAI	TTAA	8 cut(s)	414, 585, 738, 866, 1191, 1203, 1368, 1793
SatI	GCNGC	6 cut(s)	251, 254, 778, 1032, 1596, 2085
Sau3AI	GATC	9 cut(s)	91, 339, 345, 724, 925, 1096, 1936, 1961, 2178
Sau96I	GGNCC	2 cut(s)	114, 1356
SchI	GAGTC	4 cut(s)	71, 659, 830, 1055
ScrFI	CCNGG	7 cut(s)	113, 294, 331, 722, 1221, 2295, 2351
SduI	GDGCHC	4 cut(s)	159, 329, 1683, 1889
SfaNI	GCATC	3 cut(s)	1282, 1744, 2201
SfcI	CTRYAG	1 cut(s)	251
Sfr274I	CTCGAG	1 cut(s)	158
SfuI	TTCGAA	1 cut(s)	558
SinI	GGWCC	1 cut(s)	1356
SlaI	CTCGAG	1 cut(s)	158
SmiI	ATTTAAAT	1 cut(s)	1794
SmiMI	CAYNNNNRTG	3 cut(s)	903, 1707, 1827
SmlI	CTYRAG	3 cut(s)	158, 1172, 1573
SmoI	CTYRAG	3 cut(s)	158, 1172, 1573
SsiI	CCGC	9 cut(s)	89, 151, 183, 194, 227, 565, 1598, 1934, 2085
SspMI	CTAG	4 cut(s)	833, 984, 1116, 2202
SstI	GAGCTC	2 cut(s)	159, 1683
StyD4I	CCNGG	7 cut(s)	111, 292, 329, 720, 1219, 2293, 2349
StyI	CCWWGG	6 cut(s)	992, 1079, 1287, 1552, 1911, 2160
SwaI	ATTTAAAT	1 cut(s)	1794
TaaI	ACNGT	8 cut(s)	504, 593, 839, 945, 1023, 1676, 2249, 2324
TaiI	ACGT	5 cut(s)	143, 1354, 1551, 1737, 1994
TaqI	TCGA	7 cut(s)	23, 53, 147, 159, 335, 348, 558
TaqII	GACCGA	2 cut(s)	192, 1373
TatI	WGTACW	1 cut(s)	1772
TauI	GCSGC	1 cut(s)	2087
TfiI	GAWTC	5 cut(s)	199, 297, 1015, 1561, 1832
Tru1I	TTAA	8 cut(s)	414, 585, 738, 866, 1191, 1203, 1368, 1793
Tru9I	TTAA	8 cut(s)	414, 585, 738, 866, 1191, 1203, 1368, 1793
TscAI	CASTG	7 cut(s)	454, 598, 844, 1017, 1026, 2287, 2327
TseFI	GTSAC	5 cut(s)	593, 676, 973, 1063, 1709
TseI	GCWGC	5 cut(s)	250, 253, 777, 1031, 1595
Tsp45I	GTSAC	5 cut(s)	593, 676, 973, 1063, 1709
TspDTI	ATGAA	9 cut(s)	37, 119, 870, 954, 1776, 1846, 2064, 2089, 2277
TspGWI	ACGGA	3 cut(s)	1151, 1272, 2238
TspRI	CASTG	7 cut(s)	454, 598, 844, 1017, 1026, 2287, 2327
Tth111I	GACNNNGTC	2 cut(s)	239, 2123
VneI	GTGCAC	1 cut(s)	1885
VpaK11BI	GGWCC	1 cut(s)	1356
XapI	RAATTY	7 cut(s)	410, 569, 608, 1152, 1364, 2000, 2264
XbaI	TCTAGA	1 cut(s)	832
XceI	RCATGY	2 cut(s)	696, 965
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2370
XhoI	CTCGAG	1 cut(s)	158
XmnI	GAANNNNTTC	3 cut(s)	167, 554, 1228
XspI	CTAG	4 cut(s)	833, 984, 1116, 2202
ZraI	GACGTC	1 cut(s)	141

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.