Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0007806

Physical Location & Seq

Genomic Coordinates Reverse (-)

28440100 .. 28445401

Gene Structure 5302 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023798

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2361 bp

ATGGCCGGAGACGGACAAGCGTCGACGTCGAACGCGTTCTCGTTCATATCGAAGGGGTGGAGGGAAGTGAAGGACTCGGCGGACGCGGATCTCCAATTGATGAAGGACCGAGCCAACTCGTTCAAGAACTTGGCGACTTCCTTCGACCGCGAGCTCGAGAACTTGTTCAACTCGGCGACCGCAATCCGGTCGTCTTCGTCGCTGTCGCGGCCGACGGAGATTGACTTCGTGAAGAAGCTGCAGCCGAAGCTGGTGGAGATTCGGAGGGCGTACTCGTCGCCGGATTTCAGCAAGAAGGTGCTGGAGAAATGGACCCCGAGGTCTACGATTCGGATTGATTTGTCGGCGATAAAGAATGCTATAGTGTCGGAGGTGGAGGGCAGGGAAGGGATGGCGGTTGATAGGATTAGGAGGAGGAGCAGTTTGAATTTTAGTGAATTTTGGGGAGAGTGGAAAAGAGATGGTGATGATGAGGAGAAACAGTCCAGTAGGGATTGGGAGCCAATTCGAGTGTTGAAGACGAGATTGAAAGAGTTTGAGAAGCGTGAATTTCTCGGTGGGTTTAAGAACAGTGAGTTTGTGGAGAAGGTCAAGTCCAGCTTGAAATCAGTTTACAAGGATTCTCAGGAGTCACAGGCTGTACCTCCACTGGATGCGGCGGAACTTTTGGCAAGTTTGGTTAGGCAATCTGAGCCATTTCTGGATCAACTTGGCATTAGAAAAGATGTATGTGAGAAATTAGTGGAAAGCTTGTATAGTAAACGCAAGAATTACTTTCTGTTGAACTCCCCTTCTTCCGGAGAGTCATCTGTTCTAGAGGGTGAAAATGTTAATGATGAATTAGATTTAAGGATAGCTTCTGTCCTGCAAAGTACAGGGCATTCTTACGATGGTGGATTTTGGACAGACCATACAAAGCATGACCTATCAGACCAGAAACGGCATGTTGCTATAGTCACAACTGCTAGTCTTCCTTGGATGACAGGAACAGCAGTGAATCCACTTTTTCGAGCTGCGTATCTTGCTCAGACTGCAAAACAAAATGTTACCCTGTTAGTTCCATGGCTTTGCGCATCAGATCAAGAACTTGTGTATCCTAGCAATATCACTTTTACTTCACCAGAAGAGCAGGAAATTTATATCCGTAACTGGCTTGAGGAAAGGATTGGCTTTAAGGCTGACTTTAAGATCTCCTTTTATCCAGGGAAGTTTTCCAAAGAAAGGCGAAGCATTTTACCTGCTGGAGACACTTCTCAGTTCATTCCGTCCAAAGAGGCTGACATTGCTATCCTGGAAGAACCAGAACACCTGAATTGGTACCATCATGGCAGGCGATGGACCGATAAGTTTAACCATGTTGTTGGTGTTGTTCATACAAATTACTTGGAATATATCAAGAGAGAGAAGAATGGAGCTCTTCAAGCATTCTTTGTGAAGCACATAAACAATTGGGTTACAAGAGCATATTGCGACAAGGTTCTTCGCCTTTCAGCTGCCACACAGGATTTACCTAAGTCTGTGATCTGCAATGTTCATGGCGTGAATCCTAAGTTCTTAAAAATTGGAGAGAAGGTGGCTGCAGAAAAGGAAACTGGAGAGAAAACATTCTCAAAAGGAGCATATTTCTTGGGAAAGATGGTCTGGGCGAAGGGGTACCGCGAATTAATAGATTTGTTGGCAAAGCACAAGAGTGACCTTGATGGCTTCAAAGTGGATGTGTATGGGAATGGAGAGGATGCCAATGAAGTCCAGAGTACAGCTAAGAGTTTGGATTTGAATCTGAACTTTCTAAAAGGGAGGGACCATGCTGATGATTCTCTTCACGGGTACAAAGTCTTCATAAATCCCAGTGTTAGTGATGTGCTGTGCACAGCTACTGCTGAGGCACTTGCCATGGGAAAATTTGTTATTTGTGCGGACCATCCATCGAATCAGTTTTTCAGATCATTTCCTAATTGCTTGACTTATGAAACATCTGAGGACTTTGTTGCCAAAGTAAAGGAAGCAATGGAAAATGACCCTCAGCCCCTTACTCCAGAGCAAAGATTTAATCTTTCATGGGAAGCAGCTACACAGAGATTCATGGAGTATTCTGAGATGGATAAAGTCTTGGATACGGACAAGAATGGTGCAAGATCAAGCAGAGGTAAGGCAAAGGGGGTCTCAAAGTCTGCATCGGTGCCTAGCTTATCAGGTATGGTTGATGGAGGATTGGCATTTGCCCATTATTGTCTCACTGGGAATGAATTCCTTAGATTATGCACTGGGGCAACCCCTGGAACCCGTGACTACGACAAGCAACATTGTAAAGATCTCCGTATCTTGCCTCCTCAGGTTGAAAACCCTATTTATGGCTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0006643 GO:0006664 GO:0006725 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008194 GO:0008378 GO:0008610 GO:0009058 GO:0009247 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009698 GO:0009699 GO:0009707 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009808 GO:0009809 GO:0009867 GO:0009941 GO:0009987 GO:0010033 GO:0010109 GO:0016020 GO:0016053 GO:0016740 GO:0016757 GO:0016758 GO:0019222 GO:0019374 GO:0019375 GO:0019438 GO:0019748 GO:0019752 GO:0019867 GO:0023052 GO:0031090 GO:0031323 GO:0031407 GO:0031408 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032787 GO:0032870 GO:0035250 GO:0042170 GO:0042221 GO:0042548 GO:0042550 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043467 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046394 GO:0046467 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0072330 GO:0098588 GO:0098805 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576 GO:1901700 GO:1901701 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko01100 map00561 map01100

Pfam Domains

Protein Families

Glyco_trans_1_4 Glycos_transf_1

Protein Analysis

787

Amino Acids

88.85

Weight (kDa)

6.66

Isoelectric Point (pI)

39.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glycos_transf_1	PF00534	534 - 674	1.8e-11	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	541 - 672	6.9e-10	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007806)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11670 AT3G11670
fragaria_vesca	FvH4_6g20320
malus_domestica	MD12G1040400.v1.1 MD14G1039100.v1.1
prunus_persica	Prupe.7G094500_v2.0.a1
pyrus_communis	pycom12g03450 pycom14g03360
rosa_chinensis	RchiOBHm_Chr3g0475941
rosa_laevigata	RLG00000023798
rosa_multiflora	Rmu_sc0000441.1_g000087 Rmu_sc0000596.1_g000001 Rmu_sc0001809.1_g000063
rosa_roxburghii	Rroxscaffold_6G00405710
rosa_rugosa	Rorug03G0152000 Rorug03G0152100 Rorug03G0152100 Rorug03G0152200
rosa_samantha	Rh2BG524200 Rh3AG203000 Rh3BG232800 Rh3CG228300 Rh3DG228500
rosa_wichuraiana	Rw3G018460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	319
AatII	GACGTC	1 cut(s)	29
Acc16I	TGCGCA	1 cut(s)	1072
Acc36I	ACCTGC	1 cut(s)	1246
Acc65I	GGTACC	2 cut(s)	1317, 1653
AccB1I	GGYRCC	3 cut(s)	1317, 1653, 2179
AccI	GTMKAC	2 cut(s)	23, 323
AccII	CGCG	5 cut(s)	35, 86, 150, 208, 1659
AccIII	TCCGGA	1 cut(s)	797
AclWI	GGATC	2 cut(s)	96, 711
AcoI	YGGCCR	2 cut(s)	3, 209
AcsI	RAATTY	6 cut(s)	427, 437, 548, 1134, 1901, 2246
AcyI	GRCGYC	1 cut(s)	26
AfaI	GTAC	7 cut(s)	272, 642, 874, 1319, 1655, 1756, 1829
AfiI	CCNNNNNNNGG	4 cut(s)	186, 797, 1221, 2351
AflIII	ACRYGT	1 cut(s)	33
AjnI	CCWGG	3 cut(s)	1201, 1290, 2275
AleI	CACNNNNGTG	1 cut(s)	1689
Alw21I	GWGCWC	3 cut(s)	156, 1417, 1871
Alw26I	GTCTC	4 cut(s)	3, 1239, 2167, 2237
Alw44I	GTGCAC	1 cut(s)	1867
AlwI	GGATC	2 cut(s)	96, 711
AlwNI	CAGNNNCTG	1 cut(s)	1877
Ama87I	CYCGRG	2 cut(s)	155, 316
Aor13HI	TCCGGA	1 cut(s)	797
AoxI	GGCC	2 cut(s)	3, 209
ApaLI	GTGCAC	1 cut(s)	1867
ApeKI	GCWGC	6 cut(s)	238, 241, 1013, 1493, 1577, 2066
ApoI	RAATTY	6 cut(s)	427, 437, 548, 1134, 1901, 2246
AseI	ATTAAT	1 cut(s)	1664
Asp700I	GAANNNNTTC	4 cut(s)	35, 164, 1604, 2246
Asp718I	GGTACC	2 cut(s)	1317, 1653
AspLEI	GCGC	1 cut(s)	1073
AspS9I	GGNCC	5 cut(s)	106, 312, 1338, 1801, 1918
AsuHPI	GGTGA	3 cut(s)	476, 833, 1110
AvaI	CYCGRG	2 cut(s)	155, 316
AvaII	GGWCC	5 cut(s)	106, 312, 1338, 1801, 1918
AxyI	CCTNAGG	1 cut(s)	2331
BaeGI	GKGCMC	1 cut(s)	1871
BaeI	ACNNNNGTAYC	2 cut(s)	1076, 1109
BanI	GGYRCC	3 cut(s)	1317, 1653, 2179
BanII	GRGCYC	2 cut(s)	156, 1417
BarI	GAAGNNNNNNTAC	2 cut(s)	1820, 1852
BbsI	GAAGAC	4 cut(s)	186, 524, 962, 1828
Bbv12I	GWGCWC	3 cut(s)	156, 1417, 1871
BbvCI	CCTCAGC	2 cut(s)	1881, 2022
BbvI	GCAGC	6 cut(s)	225, 253, 1000, 1480, 1564, 2078
BceAI	ACGGC	1 cut(s)	956
BcgI	CGANNNNNNTGC	2 cut(s)	171, 205
BciT130I	CCWGG	3 cut(s)	1203, 1292, 2277
BciVI	GTATCC	2 cut(s)	1104, 2107
BcoDI	GTCTC	4 cut(s)	3, 1239, 2167, 2237
BfaI	CTAG	4 cut(s)	815, 966, 1098, 2184
BfmI	CTRYAG	4 cut(s)	239, 360, 951, 1578
BfuAI	ACCTGC	1 cut(s)	1246
BfuI	GTATCC	2 cut(s)	1104, 2107
BglII	AGATCT	2 cut(s)	1188, 2311
BisI	GCNGC	8 cut(s)	209, 239, 242, 657, 1014, 1494, 1578, 2067
BlsI	GCNGC	8 cut(s)	210, 240, 243, 658, 1015, 1495, 1579, 2068
Bme1390I	CCNGG	3 cut(s)	1203, 1292, 2277
Bme18I	GGWCC	5 cut(s)	106, 312, 1338, 1801, 1918
BmeT110I	CYCGRG	2 cut(s)	155, 316
BmgT120I	GGNCC	5 cut(s)	106, 312, 1338, 1801, 1918
BmiI	GGNNCC	7 cut(s)	314, 501, 1319, 1655, 1802, 2181, 2281
BmrFI	CCNGG	3 cut(s)	1203, 1292, 2277
BmrI	ACTGGG	3 cut(s)	1842, 2247, 2274
BmsI	GCATC	4 cut(s)	643, 1082, 1726, 2183
BmuI	ACTGGG	3 cut(s)	1842, 2247, 2274
BoxI	GACNNNNGTC	1 cut(s)	19
BpiI	GAAGAC	4 cut(s)	186, 524, 962, 1828
BpmI	CTGGAG	4 cut(s)	323, 1263, 1614, 2019
Bpu10I	CCTNAGC	2 cut(s)	1881, 2022
BpuEI	CTTGAG	1 cut(s)	1175
BsaBI	GATNNNNATC	1 cut(s)	1776
BsaHI	GRCGYC	1 cut(s)	26
BsaI	GGTCTC	1 cut(s)	2167
BsaJI	CCNNGG	6 cut(s)	317, 974, 1061, 1202, 1893, 2275
BsaWI	WCCGGW	2 cut(s)	186, 797
BsaXI	ACNNNNNCTCC	6 cut(s)	406, 436, 467, 497, 1557, 1587
Bsc4I	CCNNNNNNNGG	4 cut(s)	186, 797, 1221, 2351
Bse1I	ACTGG	7 cut(s)	486, 654, 1154, 1597, 1848, 2242, 2269
Bse21I	CCTNAGG	1 cut(s)	2331
Bse3DI	GCAATG	3 cut(s)	1281, 1534, 2013
Bse8I	GATNNNNATC	1 cut(s)	1776
BseAI	TCCGGA	1 cut(s)	797
BseBI	CCWGG	3 cut(s)	1203, 1292, 2277
BseDI	CCNNGG	6 cut(s)	317, 974, 1061, 1202, 1893, 2275
BseGI	GGATG	6 cut(s)	396, 658, 984, 1720, 1741, 1921
BseJI	GATNNNNATC	1 cut(s)	1776
BseLI	CCNNNNNNNGG	4 cut(s)	186, 797, 1221, 2351
BseMI	GCAATG	3 cut(s)	1281, 1534, 2013
BseMII	CTCAG	9 cut(s)	638, 681, 1040, 1268, 1872, 1968, 2036, 2085, 2345
BseNI	ACTGG	7 cut(s)	486, 654, 1154, 1597, 1848, 2242, 2269
BseRI	GAGGAG	4 cut(s)	427, 430, 488, 2319
BseSI	GKGCMC	1 cut(s)	1871
BseX3I	CGGCCG	1 cut(s)	209
BseXI	GCAGC	6 cut(s)	225, 253, 1000, 1480, 1564, 2078
Bsh1236I	CGCG	5 cut(s)	35, 86, 150, 208, 1659
Bsh1285I	CGRYCG	4 cut(s)	148, 180, 191, 212
BshFI	GGCC	2 cut(s)	5, 211
BshNI	GGYRCC	3 cut(s)	1317, 1653, 2179
BsiEI	CGRYCG	4 cut(s)	148, 180, 191, 212
BsiHKAI	GWGCWC	3 cut(s)	156, 1417, 1871
BsiHKCI	CYCGRG	2 cut(s)	155, 316
BsiSI	CCGG	4 cut(s)	6, 187, 281, 798
BslFI	GGGAC	1 cut(s)	1814
BslI	CCNNNNNNNGG	4 cut(s)	186, 797, 1221, 2351
BsmAI	GTCTC	4 cut(s)	3, 1239, 2167, 2237
BsmBI	CGTCTC	1 cut(s)	3
BsmFI	GGGAC	1 cut(s)	1814
BsmI	GAATGC	3 cut(s)	361, 880, 1424
BsnI	GGCC	2 cut(s)	5, 211
Bso31I	GGTCTC	1 cut(s)	2167
BsoBI	CYCGRG	2 cut(s)	155, 316
Bsp1286I	GDGCHC	3 cut(s)	156, 1417, 1871
Bsp13I	TCCGGA	1 cut(s)	797
Bsp143I	GATC	8 cut(s)	88, 703, 1078, 1188, 1521, 1943, 2135, 2311
Bsp19I	CCATGG	2 cut(s)	1061, 1893
BspANI	GGCC	2 cut(s)	5, 211
BspCNI	CTCAG	9 cut(s)	637, 682, 1039, 1267, 1873, 1969, 2035, 2086, 2344
BspEI	TCCGGA	1 cut(s)	797
BspFNI	CGCG	5 cut(s)	35, 86, 150, 208, 1659
BspLI	GGNNCC	7 cut(s)	314, 501, 1319, 1655, 1802, 2181, 2281
BspMAI	CTGCAG	2 cut(s)	243, 1582
BspMI	ACCTGC	1 cut(s)	1246
BspPI	GGATC	2 cut(s)	96, 711
BspQI	GCTCTTC	2 cut(s)	1119, 1422
BspT107I	GGYRCC	3 cut(s)	1317, 1653, 2179
BspTNI	GGTCTC	1 cut(s)	2167
BsrDI	GCAATG	3 cut(s)	1281, 1534, 2013
BsrI	ACTGG	7 cut(s)	486, 654, 1154, 1597, 1848, 2242, 2269
BssECI	CCNNGG	6 cut(s)	317, 974, 1061, 1202, 1893, 2275
BssMI	GATC	8 cut(s)	88, 703, 1078, 1188, 1521, 1943, 2135, 2311
BssNI	GRCGYC	1 cut(s)	26
BssT1I	CCWWGG	3 cut(s)	974, 1061, 1893
Bst2UI	CCWGG	3 cut(s)	1203, 1292, 2277
Bst4CI	ACNGT	2 cut(s)	483, 572
Bst6I	CTCTTC	3 cut(s)	1119, 1422, 1824
BstACI	GRCGYC	1 cut(s)	26
BstC8I	GCNNGC	2 cut(s)	152, 1331
BstDSI	CCRYGG	2 cut(s)	1061, 1893
BstF5I	GGATG	6 cut(s)	396, 658, 984, 1720, 1741, 1921
BstFNI	CGCG	5 cut(s)	35, 86, 150, 208, 1659
BstHHI	GCGC	1 cut(s)	1073
BstKTI	GATC	8 cut(s)	91, 706, 1081, 1191, 1524, 1946, 2138, 2314
BstMAI	GTCTC	4 cut(s)	3, 1239, 2167, 2237
BstMBI	GATC	8 cut(s)	88, 703, 1078, 1188, 1521, 1943, 2135, 2311
BstMCI	CGRYCG	4 cut(s)	148, 180, 191, 212
BstMWI	GCNNNNNNNGC	7 cut(s)	208, 247, 691, 1022, 1031, 1283, 1421
BstNI	CCWGG	3 cut(s)	1203, 1292, 2277
BstNSI	RCATGY	1 cut(s)	947
BstPAI	GACNNNNGTC	1 cut(s)	19
BstSCI	CCNGG	3 cut(s)	1201, 1290, 2275
BstSFI	CTRYAG	4 cut(s)	239, 360, 951, 1578
BstSLI	GKGCMC	1 cut(s)	1871
BstUI	CGCG	5 cut(s)	35, 86, 150, 208, 1659
BstV1I	GCAGC	6 cut(s)	225, 253, 1000, 1480, 1564, 2078
BstV2I	GAAGAC	4 cut(s)	186, 524, 962, 1828
BstX2I	RGATCY	3 cut(s)	88, 1188, 2311
BstXI	CCANNNNNNTGG	1 cut(s)	1361
BstYI	RGATCY	3 cut(s)	88, 1188, 2311
BstZI	CGGCCG	1 cut(s)	209
Bsu36I	CCTNAGG	1 cut(s)	2331
BsuI	GTATCC	2 cut(s)	1104, 2107
BsuRI	GGCC	2 cut(s)	5, 211
BtgI	CCRYGG	2 cut(s)	1061, 1893
BtgZI	GCGATG	1 cut(s)	1348
BtsCI	GGATG	6 cut(s)	396, 658, 984, 1720, 1741, 1921
BtsI	GCAGTG	1 cut(s)	999
BtsIMutI	CAGTG	6 cut(s)	577, 647, 999, 1855, 2235, 2262
BveI	ACCTGC	1 cut(s)	1246
Cac8I	GCNNGC	2 cut(s)	152, 1331
CaiI	CAGNNNCTG	1 cut(s)	1877
CfoI	GCGC	1 cut(s)	1073
Cfr13I	GGNCC	5 cut(s)	106, 312, 1338, 1801, 1918
CseI	GACGC	2 cut(s)	9, 92
Csp6I	GTAC	7 cut(s)	271, 641, 873, 1318, 1654, 1755, 1828
CviQI	GTAC	7 cut(s)	271, 641, 873, 1318, 1654, 1755, 1828
DpnI	GATC	8 cut(s)	90, 705, 1080, 1190, 1523, 1945, 2137, 2313
DpnII	GATC	8 cut(s)	88, 703, 1078, 1188, 1521, 1943, 2135, 2311
DrdI	GACNNNNNNGTC	1 cut(s)	319
DseDI	GACNNNNNNGTC	1 cut(s)	319
EaeI	YGGCCR	2 cut(s)	3, 209
EagI	CGGCCG	1 cut(s)	209
Eam1104I	CTCTTC	3 cut(s)	1119, 1422, 1824
EarI	CTCTTC	3 cut(s)	1119, 1422, 1824
EciI	GGCGGA	2 cut(s)	95, 674
Ecl136II	GAGCTC	2 cut(s)	154, 1415
EclXI	CGGCCG	1 cut(s)	209
Eco130I	CCWWGG	3 cut(s)	974, 1061, 1893
Eco24I	GRGCYC	2 cut(s)	156, 1417
Eco31I	GGTCTC	1 cut(s)	2167
Eco47I	GGWCC	5 cut(s)	106, 312, 1338, 1801, 1918
Eco52I	CGGCCG	1 cut(s)	209
Eco53kI	GAGCTC	2 cut(s)	154, 1415
Eco81I	CCTNAGG	1 cut(s)	2331
Eco88I	CYCGRG	2 cut(s)	155, 316
EcoICRI	GAGCTC	2 cut(s)	154, 1415
EcoRI	GAATTC	1 cut(s)	2246
EcoRII	CCWGG	3 cut(s)	1201, 1290, 2275
EcoT14I	CCWWGG	3 cut(s)	974, 1061, 1893
EcoT38I	GRGCYC	2 cut(s)	156, 1417
ErhI	CCWWGG	3 cut(s)	974, 1061, 1893
Esp3I	CGTCTC	1 cut(s)	3
FaqI	GGGAC	1 cut(s)	1814
FblI	GTMKAC	2 cut(s)	23, 323
Fnu4HI	GCNGC	8 cut(s)	209, 239, 242, 657, 1014, 1494, 1578, 2067
FokI	GGATG	6 cut(s)	403, 665, 991, 1727, 1748, 1908
FriOI	GRGCYC	2 cut(s)	156, 1417
Fsp4HI	GCNGC	8 cut(s)	209, 239, 242, 657, 1014, 1494, 1578, 2067
FspBI	CTAG	4 cut(s)	815, 966, 1098, 2184
FspI	TGCGCA	1 cut(s)	1072
GlaI	GCGC	1 cut(s)	1072
GluI	GCNGC	8 cut(s)	209, 239, 242, 657, 1014, 1494, 1578, 2067
GsuI	CTGGAG	4 cut(s)	323, 1263, 1614, 2019
HaeIII	GGCC	2 cut(s)	5, 211
HapII	CCGG	4 cut(s)	6, 187, 281, 798
HgaI	GACGC	2 cut(s)	9, 92
HhaI	GCGC	1 cut(s)	1073
Hin1I	GRCGYC	1 cut(s)	26
Hin6I	GCGC	1 cut(s)	1071
HinP1I	GCGC	1 cut(s)	1071
HincII	GTYRAC	1 cut(s)	24
HindII	GTYRAC	1 cut(s)	24
HindIII	AAGCTT	1 cut(s)	748
HpaII	CCGG	4 cut(s)	6, 187, 281, 798
HphI	GGTGA	3 cut(s)	476, 833, 1110
Hpy166II	GTNNAC	5 cut(s)	24, 324, 613, 761, 1869
Hpy8I	GTNNAC	5 cut(s)	24, 324, 613, 761, 1869
Hpy99I	CGWCG	6 cut(s)	25, 28, 31, 202, 217, 280
HpyCH4III	ACNGT	2 cut(s)	483, 572
HpyCH4IV	ACGT	1 cut(s)	26
HpyCH4V	TGCA	9 cut(s)	241, 868, 1034, 1527, 1580, 1869, 2132, 2174, 2262
HpyF10VI	GCNNNNNNNGC	7 cut(s)	208, 247, 691, 1022, 1031, 1283, 1421
HpySE526I	ACGT	1 cut(s)	26
Hsp92I	GRCGYC	1 cut(s)	26
HspAI	GCGC	1 cut(s)	1071
Kpn2I	TCCGGA	1 cut(s)	797
KpnI	GGTACC	2 cut(s)	1321, 1657
Kzo9I	GATC	8 cut(s)	88, 703, 1078, 1188, 1521, 1943, 2135, 2311
LguI	GCTCTTC	2 cut(s)	1119, 1422
LmnI	GCTCC	4 cut(s)	417, 499, 1412, 1616
Lsp1109I	GCAGC	6 cut(s)	225, 253, 1000, 1480, 1564, 2078
LweI	GCATC	4 cut(s)	643, 1082, 1726, 2183
MaeI	CTAG	4 cut(s)	815, 966, 1098, 2184
MaeII	ACGT	1 cut(s)	26
MaeIII	GTNAC	7 cut(s)	630, 955, 1045, 1145, 1453, 1691, 2285
MalI	GATC	8 cut(s)	90, 705, 1080, 1190, 1523, 1945, 2137, 2313
MboI	GATC	8 cut(s)	88, 703, 1078, 1188, 1521, 1943, 2135, 2311
MfeI	CAATTG	2 cut(s)	95, 1447
MflI	RGATCY	3 cut(s)	88, 1188, 2311
MhlI	GDGCHC	3 cut(s)	156, 1417, 1871
MluI	ACGCGT	1 cut(s)	33
MlyI	GAGTC	3 cut(s)	68, 638, 812
MmeI	TCCRAC	1 cut(s)	348
MroI	TCCGGA	1 cut(s)	797
MroXI	GAANNNNTTC	4 cut(s)	35, 164, 1604, 2246
MseI	TTAA	9 cut(s)	564, 831, 848, 1173, 1185, 1350, 1556, 1664, 2049
MslI	CAYNNNNRTG	2 cut(s)	1689, 1809
MspA1I	CMGCKG	1 cut(s)	1493
MspI	CCGG	4 cut(s)	6, 187, 281, 798
MspR9I	CCNGG	3 cut(s)	1203, 1292, 2277
MunI	CAATTG	2 cut(s)	95, 1447
Mva1269I	GAATGC	3 cut(s)	361, 880, 1424
MvaI	CCWGG	3 cut(s)	1203, 1292, 2277
MvnI	CGCG	5 cut(s)	35, 86, 150, 208, 1659
MwoI	GCNNNNNNNGC	7 cut(s)	208, 247, 691, 1022, 1031, 1283, 1421
NcoI	CCATGG	2 cut(s)	1061, 1893
NdeII	GATC	8 cut(s)	88, 703, 1078, 1188, 1521, 1943, 2135, 2311
NlaIV	GGNNCC	7 cut(s)	314, 501, 1319, 1655, 1802, 2181, 2281
NmeAIII	GCCGAG	2 cut(s)	56, 152
NmuCI	GTSAC	4 cut(s)	630, 955, 1691, 2285
NsbI	TGCGCA	1 cut(s)	1072
NspI	RCATGY	1 cut(s)	947
OliI	CACNNNNGTG	1 cut(s)	1689
PaeR7I	CTCGAG	1 cut(s)	155
PciSI	GCTCTTC	2 cut(s)	1119, 1422
PcsI	WCGNNNNNNNCGW	2 cut(s)	32, 47
PctI	GAATGC	3 cut(s)	361, 880, 1424
PdmI	GAANNNNTTC	4 cut(s)	35, 164, 1604, 2246
PfeI	GAWTC	9 cut(s)	259, 328, 620, 997, 1543, 1777, 1814, 1930, 2079
PfoI	TCCNGGA	1 cut(s)	1290
PkrI	GCNGC	8 cut(s)	210, 240, 243, 658, 1015, 1495, 1579, 2068
PleI	GAGTC	3 cut(s)	68, 637, 811
PpsI	GAGTC	3 cut(s)	68, 637, 811
PshAI	GACNNNNGTC	1 cut(s)	19
PshBI	ATTAAT	1 cut(s)	1664
Psp124BI	GAGCTC	2 cut(s)	156, 1417
Psp6I	CCWGG	3 cut(s)	1201, 1290, 2275
PspGI	CCWGG	3 cut(s)	1201, 1290, 2275
PspN4I	GGNNCC	7 cut(s)	314, 501, 1319, 1655, 1802, 2181, 2281
PspPI	GGNCC	5 cut(s)	106, 312, 1338, 1801, 1918
PstI	CTGCAG	2 cut(s)	243, 1582
PstNI	CAGNNNCTG	1 cut(s)	1877
PsuI	RGATCY	3 cut(s)	88, 1188, 2311
PvuII	CAGCTG	1 cut(s)	1493
RsaI	GTAC	7 cut(s)	272, 642, 874, 1319, 1655, 1756, 1829
RsaNI	GTAC	7 cut(s)	271, 641, 873, 1318, 1654, 1755, 1828
RseI	CAYNNNNRTG	2 cut(s)	1689, 1809
SacI	GAGCTC	2 cut(s)	156, 1417
SalI	GTCGAC	1 cut(s)	22
SapI	GCTCTTC	2 cut(s)	1119, 1422
SaqAI	TTAA	9 cut(s)	564, 831, 848, 1173, 1185, 1350, 1556, 1664, 2049
SatI	GCNGC	8 cut(s)	209, 239, 242, 657, 1014, 1494, 1578, 2067
Sau3AI	GATC	8 cut(s)	88, 703, 1078, 1188, 1521, 1943, 2135, 2311
Sau96I	GGNCC	5 cut(s)	106, 312, 1338, 1801, 1918
SchI	GAGTC	3 cut(s)	68, 638, 812
ScrFI	CCNGG	3 cut(s)	1203, 1292, 2277
SduI	GDGCHC	3 cut(s)	156, 1417, 1871
SfaNI	GCATC	4 cut(s)	643, 1082, 1726, 2183
SfcI	CTRYAG	4 cut(s)	239, 360, 951, 1578
Sfr274I	CTCGAG	1 cut(s)	155
SgrDI	CGTCGACG	1 cut(s)	22
SinI	GGWCC	5 cut(s)	106, 312, 1338, 1801, 1918
SlaI	CTCGAG	1 cut(s)	155
SmiMI	CAYNNNNRTG	2 cut(s)	1689, 1809
SmlI	CTYRAG	2 cut(s)	155, 1154
SmoI	CTYRAG	2 cut(s)	155, 1154
SspMI	CTAG	4 cut(s)	815, 966, 1098, 2184
SstI	GAGCTC	2 cut(s)	156, 1417
StyD4I	CCNGG	3 cut(s)	1201, 1290, 2275
StyI	CCWWGG	3 cut(s)	974, 1061, 1893
TaaI	ACNGT	2 cut(s)	483, 572
TaiI	ACGT	1 cut(s)	29
TaqI	TCGA	8 cut(s)	23, 29, 50, 144, 156, 508, 1009, 1928
TaqII	GACCGA	2 cut(s)	123, 1355
TatI	WGTACW	2 cut(s)	872, 1754
TauI	GCSGC	2 cut(s)	211, 659
TfiI	GAWTC	9 cut(s)	259, 328, 620, 997, 1543, 1777, 1814, 1930, 2079
Tru1I	TTAA	9 cut(s)	564, 831, 848, 1173, 1185, 1350, 1556, 1664, 2049
Tru9I	TTAA	9 cut(s)	564, 831, 848, 1173, 1185, 1350, 1556, 1664, 2049
TscAI	CASTG	6 cut(s)	577, 654, 999, 1855, 2242, 2269
TseFI	GTSAC	4 cut(s)	630, 955, 1691, 2285
TseI	GCWGC	6 cut(s)	238, 241, 1013, 1493, 1577, 2066
Tsp45I	GTSAC	4 cut(s)	630, 955, 1691, 2285
TspGWI	ACGGA	6 cut(s)	27, 230, 1133, 1254, 2132, 2306
TspRI	CASTG	6 cut(s)	577, 654, 999, 1855, 2242, 2269
VneI	GTGCAC	1 cut(s)	1867
VpaK11BI	GGWCC	5 cut(s)	106, 312, 1338, 1801, 1918
VspI	ATTAAT	1 cut(s)	1664
XapI	RAATTY	6 cut(s)	427, 437, 548, 1134, 1901, 2246
XbaI	TCTAGA	1 cut(s)	814
XceI	RCATGY	1 cut(s)	947
XhoI	CTCGAG	1 cut(s)	155
XmiI	GTMKAC	2 cut(s)	23, 323
XmnI	GAANNNNTTC	4 cut(s)	35, 164, 1604, 2246
XspI	CTAG	4 cut(s)	815, 966, 1098, 2184
ZraI	GACGTC	1 cut(s)	27

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.