Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0007806

Physical Location & Seq

Genomic Coordinates Forward (+)

20037212 .. 20043617

Gene Structure 6406 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG203000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1830 bp

ATGTGGTCATATGTGAGCAGCACATATTCTTATCACTTCAGTATTTTGACTATTTTCTTTTTCTGTTTTCAGAAATCAGTTTACAAGGATTCTCAGGAGTCACAGGCTGTACCTCCACTGGATGCGGCGGAACTTTTGGCAAGTTTGGTTAGGCAATCTGAGCCATTTCTGGATCAACTTGGCATTAGAAAAGATGTATGTGAGAAATTAGTGGAAAGCTTGTATAGTAAACGCAAGAATTACTTTCTGTTGAACTCCCCTTCTTCCGGAGAGTCATCTGTTCTAGAGGGTGAAAACGTTAATGATGAATTAGATTTAAGGATAGCTTCTGTCCTGCAAAGTACAGGGCATTCTTACGATGGTGGATTTTGGACAGACCATGCAAAGCATGACCCATCAGACCAGAAACGGCATGTTGCTATAGTCACAACTGCTAGTCTTCCTTGGATGACAGGAACAGCAGTGAATCCACTTTTTCGAGCTGCGTATCTTGCTCAGACTGCAAAACAAAATGTTACCCTGTTAGTTCCATGGCTTTGCGCATCAGATCAAGAACTTGTGTATCCTAGCAATATCACTTTTACTTCACCTGAAGAGCAGGAAATTTATATCCGTAACTGGCTTGAGGAAAGGATTGGCTTTAAGGCTGACTTTAAGATCTCCTTTTATCCAGGGAAGTTTTCCAAAGAAAGGCGAAGCATTTTACCTGCTGGAGACACTTCTCAGTTCATTCCGTCCAAAGAGGCTGACATTGCTATCCTGGAAGAACCAGAACACCTGAATTGGTACCATCATGGCAGGCGATGGACTGATAAGTTTAACCATGTTGTTGGTGTTGTTCATACAAATTACTTGGAATATATCAAGAGAGAGAAGAATGGAGCTCTTCAAGCATTCTTTGTGAAGCACATAAACAATTGGGTTACAAGAGCATATTGCGACAAGGTTCTTCGCCTTTCAGCTGCCACACAGGATTTACCTAAGTCTGTGATCTGCAATGTTCATGGCGTGAATCCTAAGTTCTTAAAAATTGGAGAGAAGGTGGCTGCAGAAAAGGAAACTGGAGAGAAAACATTCTCAAAAGGAGCATATTTCTTGGGAAAGATGGTCTGGGCGAAGGGATACCGCGAATTGATAGATTTGTTGGCAAAGCACAAGAGTGACCTTGATGGCTTCAAAGTGGATGTGTATGGGAATGGAGAGGATGCCAATGAAGTCCAGAGTACAGCTAAGAGTTTGGATTTGAATCTGAACTTTCTAAAAGGGAGGGACCATGCTGATGATTCTCTTCACGGGTACAAAGTCTTCATAAATCCCAGTGTTAGTGATGTGCTGTGCACCGCTACTGCTGAGGCGCTTGCCATGGGAAAATTTGTTGTTTGTGCGGACCATCCATCAAATCAGTTTTTCAGATCATTTCCTAATTGCTTGACTTATGAAACATCTGAGGACTTTGTTGCCAAAGTAAAGGAAGCAATGGAAAATGACCCTCAGCCCCTTACTCCAGAGCAAAGATTTAATCTTTCATGGGAAGCAGCTACACAGAGATTCATGGAATATTCTGAGATGGATAAAGTCTTGGATACGGAAAAGAGTGGTGCAAGATCAAGCAGAGGTAAGGGAAGGGGGGTGTCAAAGTCCGCATCTATGCCTAGCTTATCAGGTATGGTTGATGGAGGATTGGCATTTGCCCATTATTGTCTCACCGGGAATGAATTCCTTAGGTTATGCACTGGGGCAACCCCTGGAACCCGTGACTACGACAAGCAACATTGTAAAGATCTCCGTCTCTTGCCTCCTCAGGTTGAAAACCCTATTTATGGCTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0006643 GO:0006664 GO:0006725 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008194 GO:0008378 GO:0008610 GO:0009058 GO:0009247 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009698 GO:0009699 GO:0009707 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009808 GO:0009809 GO:0009867 GO:0009941 GO:0009987 GO:0010033 GO:0010109 GO:0016020 GO:0016053 GO:0016740 GO:0016757 GO:0016758 GO:0019222 GO:0019374 GO:0019375 GO:0019438 GO:0019748 GO:0019752 GO:0019867 GO:0023052 GO:0031090 GO:0031323 GO:0031407 GO:0031408 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032787 GO:0032870 GO:0035250 GO:0042170 GO:0042221 GO:0042548 GO:0042550 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043467 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046394 GO:0046467 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0072330 GO:0098588 GO:0098805 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576 GO:1901700 GO:1901701 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko01100 map00561 map01100

Pfam Domains

Protein Families

Glyco_trans_1_4 Glycos_transf_1

Protein Analysis

609

Amino Acids

68.72

Weight (kDa)

6.17

Isoelectric Point (pI)

37.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glycos_transf_1	PF00534	357 - 497	1.5e-11	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	364 - 495	2.6e-10	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007806)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11670 AT3G11670
fragaria_vesca	FvH4_6g20320
malus_domestica	MD12G1040400.v1.1 MD14G1039100.v1.1
prunus_persica	Prupe.7G094500_v2.0.a1
pyrus_communis	pycom12g03450 pycom14g03360
rosa_chinensis	RchiOBHm_Chr3g0475941
rosa_laevigata	RLG00000023798
rosa_multiflora	Rmu_sc0000441.1_g000087 Rmu_sc0000596.1_g000001 Rmu_sc0001809.1_g000063
rosa_roxburghii	Rroxscaffold_6G00405710
rosa_rugosa	Rorug03G0152000 Rorug03G0152100 Rorug03G0152100 Rorug03G0152200
rosa_samantha	Rh2BG524200 Rh3AG203000 Rh3BG232800 Rh3CG228300 Rh3DG228500
rosa_wichuraiana	Rw3G018460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	541
Acc36I	ACCTGC	1 cut(s)	715
Acc65I	GGTACC	1 cut(s)	786
AccB1I	GGYRCC	1 cut(s)	786
AccII	CGCG	1 cut(s)	1128
AccIII	TCCGGA	1 cut(s)	266
AciI	CCGC	6 cut(s)	125, 128, 1126, 1341, 1385, 1641
AclI	AACGTT	1 cut(s)	297
AclWI	GGATC	1 cut(s)	180
AcsI	RAATTY	3 cut(s)	603, 1370, 1715
AcuI	CTGAAG	2 cut(s)	22, 612
AfaI	GTAC	5 cut(s)	111, 343, 788, 1225, 1298
AfiI	CCNNNNNNNGG	3 cut(s)	266, 690, 1820
AgsI	TTSAA	5 cut(s)	253, 890, 1177, 1246, 1808
AjnI	CCWGG	3 cut(s)	670, 759, 1744
AleI	CACNNNNGTG	1 cut(s)	1158
AluBI	AGCT	8 cut(s)	219, 326, 482, 884, 962, 1229, 1538, 1656
AluI	AGCT	8 cut(s)	219, 326, 482, 884, 962, 1229, 1538, 1656
Alw21I	GWGCWC	2 cut(s)	886, 1340
Alw26I	GTCTC	3 cut(s)	708, 1706, 1793
Alw44I	GTGCAC	1 cut(s)	1336
AlwI	GGATC	1 cut(s)	180
Aor13HI	TCCGGA	1 cut(s)	266
ApaLI	GTGCAC	1 cut(s)	1336
ApeKI	GCWGC	5 cut(s)	18, 482, 962, 1046, 1535
ApoI	RAATTY	3 cut(s)	603, 1370, 1715
Asp700I	GAANNNNTTC	2 cut(s)	1073, 1715
Asp718I	GGTACC	1 cut(s)	786
AspLEI	GCGC	2 cut(s)	542, 1357
AspS9I	GGNCC	2 cut(s)	1270, 1387
AsuC2I	CCSGG	1 cut(s)	1708
AsuHPI	GGTGA	3 cut(s)	302, 579, 1696
AvaII	GGWCC	2 cut(s)	1270, 1387
AxyI	CCTNAGG	2 cut(s)	1721, 1800
BaeGI	GKGCMC	1 cut(s)	1340
BaeI	ACNNNNGTAYC	2 cut(s)	545, 578
BanI	GGYRCC	1 cut(s)	786
BanII	GRGCYC	1 cut(s)	886
BarI	GAAGNNNNNNTAC	2 cut(s)	1289, 1321
BbsI	GAAGAC	2 cut(s)	431, 1297
Bbv12I	GWGCWC	2 cut(s)	886, 1340
BbvCI	CCTCAGC	2 cut(s)	1350, 1491
BbvI	GCAGC	5 cut(s)	30, 469, 949, 1033, 1547
BceAI	ACGGC	1 cut(s)	425
BciT130I	CCWGG	3 cut(s)	672, 761, 1746
BciVI	GTATCC	3 cut(s)	573, 1115, 1576
BcnI	CCSGG	1 cut(s)	1708
BcoDI	GTCTC	3 cut(s)	708, 1706, 1793
BfaI	CTAG	4 cut(s)	284, 435, 567, 1653
BfmI	CTRYAG	2 cut(s)	420, 1047
BfoI	RGCGCY	1 cut(s)	1358
BfuAI	ACCTGC	1 cut(s)	715
BfuI	GTATCC	3 cut(s)	573, 1115, 1576
BglII	AGATCT	2 cut(s)	657, 1780
BisI	GCNGC	6 cut(s)	19, 126, 483, 963, 1047, 1536
BlsI	GCNGC	6 cut(s)	20, 127, 484, 964, 1048, 1537
Bme1390I	CCNGG	4 cut(s)	672, 761, 1708, 1746
Bme18I	GGWCC	2 cut(s)	1270, 1387
BmgT120I	GGNCC	2 cut(s)	1270, 1387
BmiI	GGNNCC	3 cut(s)	788, 1271, 1750
BmrFI	CCNGG	4 cut(s)	672, 761, 1708, 1746
BmrI	ACTGGG	2 cut(s)	1311, 1743
BmsI	GCATC	4 cut(s)	112, 551, 1195, 1652
BmuI	ACTGGG	2 cut(s)	1311, 1743
BpiI	GAAGAC	2 cut(s)	431, 1297
BpmI	CTGGAG	3 cut(s)	732, 1083, 1488
Bpu10I	CCTNAGC	2 cut(s)	1350, 1491
BpuEI	CTTGAG	1 cut(s)	644
BpuMI	CCSGG	1 cut(s)	1708
BsaBI	GATNNNNATC	1 cut(s)	1245
BsaJI	CCNNGG	5 cut(s)	443, 530, 671, 1362, 1744
BsaWI	WCCGGW	1 cut(s)	266
BsaXI	ACNNNNNCTCC	2 cut(s)	1026, 1056
Bsc4I	CCNNNNNNNGG	3 cut(s)	266, 690, 1820
Bse1I	ACTGG	5 cut(s)	123, 623, 1066, 1317, 1738
Bse21I	CCTNAGG	2 cut(s)	1721, 1800
Bse3DI	GCAATG	3 cut(s)	750, 1003, 1482
Bse8I	GATNNNNATC	1 cut(s)	1245
BseAI	TCCGGA	1 cut(s)	266
BseBI	CCWGG	3 cut(s)	672, 761, 1746
BseDI	CCNNGG	5 cut(s)	443, 530, 671, 1362, 1744
BseGI	GGATG	5 cut(s)	127, 453, 1189, 1210, 1390
BseJI	GATNNNNATC	1 cut(s)	1245
BseLI	CCNNNNNNNGG	3 cut(s)	266, 690, 1820
BseMI	GCAATG	3 cut(s)	750, 1003, 1482
BseMII	CTCAG	9 cut(s)	107, 150, 509, 737, 1341, 1437, 1505, 1554, 1814
BseNI	ACTGG	5 cut(s)	123, 623, 1066, 1317, 1738
BseRI	GAGGAG	1 cut(s)	1788
BseSI	GKGCMC	1 cut(s)	1340
BseXI	GCAGC	5 cut(s)	30, 469, 949, 1033, 1547
Bsh1236I	CGCG	1 cut(s)	1128
BshNI	GGYRCC	1 cut(s)	786
BsiHKAI	GWGCWC	2 cut(s)	886, 1340
BsiSI	CCGG	2 cut(s)	267, 1707
BslFI	GGGAC	1 cut(s)	1283
BslI	CCNNNNNNNGG	3 cut(s)	266, 690, 1820
BsmAI	GTCTC	3 cut(s)	708, 1706, 1793
BsmBI	CGTCTC	1 cut(s)	1793
BsmFI	GGGAC	1 cut(s)	1283
BsmI	GAATGC	2 cut(s)	349, 893
Bsp1286I	GDGCHC	2 cut(s)	886, 1340
Bsp13I	TCCGGA	1 cut(s)	266
Bsp143I	GATC	7 cut(s)	172, 547, 657, 990, 1412, 1604, 1780
Bsp19I	CCATGG	2 cut(s)	530, 1362
BspACI	CCGC	6 cut(s)	125, 128, 1126, 1341, 1385, 1641
BspCNI	CTCAG	9 cut(s)	106, 151, 508, 736, 1342, 1438, 1504, 1555, 1813
BspEI	TCCGGA	1 cut(s)	266
BspFNI	CGCG	1 cut(s)	1128
BspLI	GGNNCC	3 cut(s)	788, 1271, 1750
BspMAI	CTGCAG	1 cut(s)	1051
BspMI	ACCTGC	1 cut(s)	715
BspPI	GGATC	1 cut(s)	180
BspQI	GCTCTTC	2 cut(s)	588, 891
BspT107I	GGYRCC	1 cut(s)	786
BsrDI	GCAATG	3 cut(s)	750, 1003, 1482
BsrI	ACTGG	5 cut(s)	123, 623, 1066, 1317, 1738
BssECI	CCNNGG	5 cut(s)	443, 530, 671, 1362, 1744
BssMI	GATC	7 cut(s)	172, 547, 657, 990, 1412, 1604, 1780
BssT1I	CCWWGG	3 cut(s)	443, 530, 1362
Bst2UI	CCWGG	3 cut(s)	672, 761, 1746
Bst6I	CTCTTC	3 cut(s)	588, 891, 1293
BstC8I	GCNNGC	2 cut(s)	800, 1359
BstDSI	CCRYGG	2 cut(s)	530, 1362
BstF5I	GGATG	5 cut(s)	127, 453, 1189, 1210, 1390
BstFNI	CGCG	1 cut(s)	1128
BstH2I	RGCGCY	1 cut(s)	1358
BstHHI	GCGC	2 cut(s)	542, 1357
BstKTI	GATC	7 cut(s)	175, 550, 660, 993, 1415, 1607, 1783
BstMAI	GTCTC	3 cut(s)	708, 1706, 1793
BstMBI	GATC	7 cut(s)	172, 547, 657, 990, 1412, 1604, 1780
BstMWI	GCNNNNNNNGC	5 cut(s)	160, 491, 500, 752, 890
BstNI	CCWGG	3 cut(s)	672, 761, 1746
BstNSI	RCATGY	1 cut(s)	416
BstSCI	CCNGG	4 cut(s)	670, 759, 1706, 1744
BstSFI	CTRYAG	2 cut(s)	420, 1047
BstSLI	GKGCMC	1 cut(s)	1340
BstUI	CGCG	1 cut(s)	1128
BstV1I	GCAGC	5 cut(s)	30, 469, 949, 1033, 1547
BstV2I	GAAGAC	2 cut(s)	431, 1297
BstX2I	RGATCY	2 cut(s)	657, 1780
BstXI	CCANNNNNNTGG	1 cut(s)	830
BstYI	RGATCY	2 cut(s)	657, 1780
Bsu36I	CCTNAGG	2 cut(s)	1721, 1800
BsuI	GTATCC	3 cut(s)	573, 1115, 1576
BtgI	CCRYGG	2 cut(s)	530, 1362
BtgZI	GCGATG	1 cut(s)	817
BtsCI	GGATG	5 cut(s)	127, 453, 1189, 1210, 1390
BtsI	GCAGTG	1 cut(s)	468
BtsIMutI	CAGTG	4 cut(s)	116, 468, 1324, 1731
BveI	ACCTGC	1 cut(s)	715
Cac8I	GCNNGC	2 cut(s)	800, 1359
CfoI	GCGC	2 cut(s)	542, 1357
Cfr13I	GGNCC	2 cut(s)	1270, 1387
Csp6I	GTAC	5 cut(s)	110, 342, 787, 1224, 1297
CviQI	GTAC	5 cut(s)	110, 342, 787, 1224, 1297
DpnI	GATC	7 cut(s)	174, 549, 659, 992, 1414, 1606, 1782
DpnII	GATC	7 cut(s)	172, 547, 657, 990, 1412, 1604, 1780
Eam1104I	CTCTTC	3 cut(s)	588, 891, 1293
EarI	CTCTTC	3 cut(s)	588, 891, 1293
EciI	GGCGGA	1 cut(s)	143
Ecl136II	GAGCTC	1 cut(s)	884
Eco130I	CCWWGG	3 cut(s)	443, 530, 1362
Eco24I	GRGCYC	1 cut(s)	886
Eco47I	GGWCC	2 cut(s)	1270, 1387
Eco53kI	GAGCTC	1 cut(s)	884
Eco57I	CTGAAG	2 cut(s)	22, 612
Eco81I	CCTNAGG	2 cut(s)	1721, 1800
EcoICRI	GAGCTC	1 cut(s)	884
EcoRI	GAATTC	1 cut(s)	1715
EcoRII	CCWGG	3 cut(s)	670, 759, 1744
EcoT14I	CCWWGG	3 cut(s)	443, 530, 1362
EcoT38I	GRGCYC	1 cut(s)	886
ErhI	CCWWGG	3 cut(s)	443, 530, 1362
Esp3I	CGTCTC	1 cut(s)	1793
FalI	AAGNNNNNCTT	8 cut(s)	227, 259, 310, 342, 635, 667, 647, 679
FaqI	GGGAC	1 cut(s)	1283
FauNDI	CATATG	1 cut(s)	10
Fnu4HI	GCNGC	6 cut(s)	19, 126, 483, 963, 1047, 1536
FokI	GGATG	5 cut(s)	134, 460, 1196, 1217, 1377
FriOI	GRGCYC	1 cut(s)	886
Fsp4HI	GCNGC	6 cut(s)	19, 126, 483, 963, 1047, 1536
FspBI	CTAG	4 cut(s)	284, 435, 567, 1653
FspI	TGCGCA	1 cut(s)	541
GlaI	GCGC	2 cut(s)	541, 1356
GluI	GCNGC	6 cut(s)	19, 126, 483, 963, 1047, 1536
GsuI	CTGGAG	3 cut(s)	732, 1083, 1488
HaeII	RGCGCY	1 cut(s)	1358
HapII	CCGG	2 cut(s)	267, 1707
HhaI	GCGC	2 cut(s)	542, 1357
Hin6I	GCGC	2 cut(s)	540, 1355
HinP1I	GCGC	2 cut(s)	540, 1355
HindIII	AAGCTT	1 cut(s)	217
HinfI	GANTC	8 cut(s)	89, 98, 272, 466, 1012, 1246, 1283, 1548
HpaII	CCGG	2 cut(s)	267, 1707
HphI	GGTGA	3 cut(s)	302, 579, 1696
Hpy166II	GTNNAC	3 cut(s)	82, 230, 1338
Hpy188I	TCNGA	9 cut(s)	72, 160, 400, 498, 547, 1251, 1412, 1447, 1564
Hpy188III	TCNNGA	8 cut(s)	95, 170, 267, 284, 551, 865, 1219, 1505
Hpy8I	GTNNAC	3 cut(s)	82, 230, 1338
HpyAV	CCTTC	4 cut(s)	270, 1033, 1111, 1617
HpyCH4IV	ACGT	1 cut(s)	297
HpyCH4V	TGCA	8 cut(s)	337, 383, 503, 996, 1049, 1338, 1601, 1731
HpyF10VI	GCNNNNNNNGC	5 cut(s)	160, 491, 500, 752, 890
HpySE526I	ACGT	1 cut(s)	297
HspAI	GCGC	2 cut(s)	540, 1355
Kpn2I	TCCGGA	1 cut(s)	266
KpnI	GGTACC	1 cut(s)	790
Kzo9I	GATC	7 cut(s)	172, 547, 657, 990, 1412, 1604, 1780
LguI	GCTCTTC	2 cut(s)	588, 891
LmnI	GCTCC	2 cut(s)	881, 1085
Lsp1109I	GCAGC	5 cut(s)	30, 469, 949, 1033, 1547
LweI	GCATC	4 cut(s)	112, 551, 1195, 1652
MaeI	CTAG	4 cut(s)	284, 435, 567, 1653
MaeII	ACGT	1 cut(s)	297
MaeIII	GTNAC	7 cut(s)	99, 424, 514, 614, 922, 1160, 1754
MalI	GATC	7 cut(s)	174, 549, 659, 992, 1414, 1606, 1782
MboI	GATC	7 cut(s)	172, 547, 657, 990, 1412, 1604, 1780
MboII	GAAGA	9 cut(s)	255, 431, 605, 776, 878, 886, 941, 1280, 1297
MfeI	CAATTG	1 cut(s)	916
MflI	RGATCY	2 cut(s)	657, 1780
MhlI	GDGCHC	2 cut(s)	886, 1340
MlyI	GAGTC	2 cut(s)	107, 281
MroI	TCCGGA	1 cut(s)	266
MroXI	GAANNNNTTC	2 cut(s)	1073, 1715
MseI	TTAA	7 cut(s)	300, 317, 642, 654, 819, 1025, 1518
MslI	CAYNNNNRTG	2 cut(s)	1158, 1278
MspA1I	CMGCKG	1 cut(s)	962
MspI	CCGG	2 cut(s)	267, 1707
MspR9I	CCNGG	4 cut(s)	672, 761, 1708, 1746
MunI	CAATTG	1 cut(s)	916
Mva1269I	GAATGC	2 cut(s)	349, 893
MvaI	CCWGG	3 cut(s)	672, 761, 1746
MvnI	CGCG	1 cut(s)	1128
MwoI	GCNNNNNNNGC	5 cut(s)	160, 491, 500, 752, 890
NciI	CCSGG	1 cut(s)	1708
NcoI	CCATGG	2 cut(s)	530, 1362
NdeI	CATATG	1 cut(s)	10
NdeII	GATC	7 cut(s)	172, 547, 657, 990, 1412, 1604, 1780
NlaIV	GGNNCC	3 cut(s)	788, 1271, 1750
NmuCI	GTSAC	4 cut(s)	99, 424, 1160, 1754
NsbI	TGCGCA	1 cut(s)	541
NspI	RCATGY	1 cut(s)	416
OliI	CACNNNNGTG	1 cut(s)	1158
PciSI	GCTCTTC	2 cut(s)	588, 891
PctI	GAATGC	2 cut(s)	349, 893
PdmI	GAANNNNTTC	2 cut(s)	1073, 1715
PfeI	GAWTC	6 cut(s)	89, 466, 1012, 1246, 1283, 1548
PfoI	TCCNGGA	1 cut(s)	759
PkrI	GCNGC	6 cut(s)	20, 127, 484, 964, 1048, 1537
PleI	GAGTC	2 cut(s)	106, 280
PpsI	GAGTC	2 cut(s)	106, 280
Psp124BI	GAGCTC	1 cut(s)	886
Psp1406I	AACGTT	1 cut(s)	297
Psp6I	CCWGG	3 cut(s)	670, 759, 1744
PspGI	CCWGG	3 cut(s)	670, 759, 1744
PspN4I	GGNNCC	3 cut(s)	788, 1271, 1750
PspPI	GGNCC	2 cut(s)	1270, 1387
PstI	CTGCAG	1 cut(s)	1051
PsuI	RGATCY	2 cut(s)	657, 1780
PvuII	CAGCTG	1 cut(s)	962
RsaI	GTAC	5 cut(s)	111, 343, 788, 1225, 1298
RsaNI	GTAC	5 cut(s)	110, 342, 787, 1224, 1297
RseI	CAYNNNNRTG	2 cut(s)	1158, 1278
SacI	GAGCTC	1 cut(s)	886
SapI	GCTCTTC	2 cut(s)	588, 891
SaqAI	TTAA	7 cut(s)	300, 317, 642, 654, 819, 1025, 1518
SatI	GCNGC	6 cut(s)	19, 126, 483, 963, 1047, 1536
Sau3AI	GATC	7 cut(s)	172, 547, 657, 990, 1412, 1604, 1780
Sau96I	GGNCC	2 cut(s)	1270, 1387
SchI	GAGTC	2 cut(s)	107, 281
ScrFI	CCNGG	4 cut(s)	672, 761, 1708, 1746
SduI	GDGCHC	2 cut(s)	886, 1340
SfaNI	GCATC	4 cut(s)	112, 551, 1195, 1652
SfcI	CTRYAG	2 cut(s)	420, 1047
SinI	GGWCC	2 cut(s)	1270, 1387
SmiMI	CAYNNNNRTG	2 cut(s)	1158, 1278
SmlI	CTYRAG	1 cut(s)	623
SmoI	CTYRAG	1 cut(s)	623
SsiI	CCGC	6 cut(s)	125, 128, 1126, 1341, 1385, 1641
SspI	AATATT	1 cut(s)	1559
SspMI	CTAG	4 cut(s)	284, 435, 567, 1653
SstI	GAGCTC	1 cut(s)	886
StyD4I	CCNGG	4 cut(s)	670, 759, 1706, 1744
StyI	CCWWGG	3 cut(s)	443, 530, 1362
TaiI	ACGT	1 cut(s)	300
TaqI	TCGA	1 cut(s)	478
TatI	WGTACW	2 cut(s)	341, 1223
TauI	GCSGC	1 cut(s)	128
TfiI	GAWTC	6 cut(s)	89, 466, 1012, 1246, 1283, 1548
Tru1I	TTAA	7 cut(s)	300, 317, 642, 654, 819, 1025, 1518
Tru9I	TTAA	7 cut(s)	300, 317, 642, 654, 819, 1025, 1518
TscAI	CASTG	4 cut(s)	123, 468, 1324, 1738
TseFI	GTSAC	4 cut(s)	99, 424, 1160, 1754
TseI	GCWGC	5 cut(s)	18, 482, 962, 1046, 1535
Tsp45I	GTSAC	4 cut(s)	99, 424, 1160, 1754
TspGWI	ACGGA	4 cut(s)	602, 723, 1601, 1775
TspRI	CASTG	4 cut(s)	123, 468, 1324, 1738
VneI	GTGCAC	1 cut(s)	1336
VpaK11BI	GGWCC	2 cut(s)	1270, 1387
XapI	RAATTY	3 cut(s)	603, 1370, 1715
XbaI	TCTAGA	1 cut(s)	283
XceI	RCATGY	1 cut(s)	416
XmnI	GAANNNNTTC	2 cut(s)	1073, 1715
XspI	CTAG	4 cut(s)	284, 435, 567, 1653

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.