Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0007806

Physical Location & Seq

Genomic Coordinates Reverse (-)

28162503 .. 28168340

Gene Structure 5838 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00405710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2265 bp

ATGAAGGACCGAGCCAACTCGTTCAAGAACTTGGCGACTTCCTTCGACCGCGAGCTCGAGAACTTGTTCAACTCGGCGACCGCAATCCGGTCGTCTTCGTCGCTGTCGCGGCCGACGGAGATCGACTTCGTGAAGAAGCTGCAGCCGAAGCTGGTGGAGATTCGGAGGGCGTACTCGTCGCCGGATTTCAGCAAGAAGGTGCTGGAGAAGTGGACCCCGAGGTCGACGATTCGGATTGATTTGTCGGCGATAAAGAATGCTATAGTGTCGGAGGTGGAGGGCAGGGAAGGGATGGCGGAGTTTGATAGGATTAGGAGGAGGAGGAGTTTGAAGTTTAGTGAGTTTTGGGGAGAGTGGAAAAGAGACGGTGATGATGAGGAGAAACAGTCCGGTAGGGATTGGGAGCCAATTCGAGTGTTGAAGACGAGATTGAAAGAGTTTGAGAAGCGTGAATTTCTCGGTGGGTTTAAGAACAGTGAGTTTGTGGAGAAGGTCAAGTCCAGCTTGAAATCAGTTTACAAGGATTCTCAGGAGTCACAGGCTGTACCTCCACTGGATGCAGCGGAACTTTTGGCAAGTTTGGTTAGGCAATCTGAGCCATTTCTGGATCAACTTGGCATTAGAAAAGATGTATGTGAGAAATTAGTGGAAAGCTTGTATAGTAAACGCAAGAATTACTTTCTGTTGAACTCCCCTTCTTCCGGAGAGTCATCTGTTCTAGAGGGTGAAAACGTTAATGATGAATTAGATTTAAGGATAGCTTCTGTCCTGCAAAGTACAGGGCATTCTTATGATGGTGGATTTTGGACAGACCATGCAAAGCATGACCCATCAGACCAGAAACGGCATGTTGCTATAGTCACAACTGCTAGTCTTCCTTGGATGACAGGAACAGCAGTGAATCCACTTTTTCGAGCTGCGTATCTTGCTCAGACTGCAAAACAAAATGTTACCCTGTTAGTTCCATGGCTTTGCGCATCAGATCAAGAACTTGTGTATCCTAGCAATATCACTTTTACTTCACCAGAAGAGCAGGAAATTTATATCCGTAACTGGCTTGAGGAAAGGATTGGCTTTAAGGCTGACTTTAAGATCTCCTTTTATCCAGGGAAGTTTTCCAAAGAAAGGCGAAGCATTTTACCTGCTGGAGACACTTCTCAGTTCATTCCGTCCAAAGAGGCTGACATTGCTATCCTGGAAGAACCAGAACACCTGAATTGGTACCATCATGGCAGGCGATGGACCGATAAGTTTAACCATGTTGTTGGTGTTGTTCATACAAATTACTTGGAATATATCAAAAGAGAGAAGAATGGAGCTCTTCAAGCATTCTTTGTGAAGCACATAAACAATTGGGTTACAAGAGCATATTGCGACAAGGTTCTTCGCCTTTCAGCTGCCACACAGGATTTACCTAAGTCTGTGATCTGCAATGTTCATGGCGTGAATCCTAAGTTCTTAAAAATTGGAGAGAAGGTGGCTGCAGAAAAGGAAACTGGAGAGAAAACATTCTCAAAAGGAGCATATTTCTTGGGAAAGATGGTCTGGGCGAAGGGATACCGCGAATTGATAGATTTGTTGGCAAAGCACAAGAGTGACCTTGATGGCTTCAAAGTGGATGTGTATGGGAATGGAGAGGATGCCAATGAAGTCCAGAGTACAGCTAAGAGTCTGGATTTGAATCTGAACTTTCTAAAAGGGAGGGACCATGCTGATGATTCTCTTCACGGGTACAAAGTCTTCATAAATCCCAGTGTTAGTGATGTGCTGTGCACGGCTACTGCTGAGGCGCTTGCCATGGGAAAATTTGTTGTTTGTGCGGACCATCCATCAAATCAGTTTTTCAGATCATTTCCTAATTGCTTGACTTATGAAACATCTGAGGACTTTGTTGCCAAAGTAAAGGAAGCAATGGAAAATGACCCTCAGCCCCTTACTCCAGAGCAAAGATTTAATCTTTCATGGGAAGCAGCTACACAGAGATTCATGGAGTATTCTGAGATGGATAAAGTCTTGGATACGGAAAAGAATGGTGCAAGATCAAGCAGAGGTAAGGGAAAGGGGGTCTCAAAGTCTGCATCTATGCCTAGCTTATCAGGTATGGTTGATGGAGGATTGGCATTTGCCCATTATTGTCTCACCGGGAATGAATTCCTTAGATTATGCACTGGGGCAACCCCTGGAACCCGTGACTACGACAAGCAACATTGTAAAGATCTCCGTCTCTTGCCTCCTCAGGTTGAAAACCCTATTTATGGCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0006643 GO:0006664 GO:0006725 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008194 GO:0008378 GO:0008610 GO:0009058 GO:0009247 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009698 GO:0009699 GO:0009707 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009808 GO:0009809 GO:0009867 GO:0009941 GO:0009987 GO:0010033 GO:0010109 GO:0016020 GO:0016053 GO:0016740 GO:0016757 GO:0016758 GO:0019222 GO:0019374 GO:0019375 GO:0019438 GO:0019748 GO:0019752 GO:0019867 GO:0023052 GO:0031090 GO:0031323 GO:0031407 GO:0031408 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032787 GO:0032870 GO:0035250 GO:0042170 GO:0042221 GO:0042548 GO:0042550 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043467 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046394 GO:0046467 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0072330 GO:0098588 GO:0098805 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576 GO:1901700 GO:1901701 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko01100 map00561 map01100

Pfam Domains

Protein Families

Glyco_trans_1_4 Glycos_transf_1

Protein Analysis

754

Amino Acids

85.57

Weight (kDa)

7.26

Isoelectric Point (pI)

40.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glycos_transf_1	PF00534	502 - 642	2.1e-11	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	509 - 640	3.7e-10	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007806)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11670 AT3G11670
fragaria_vesca	FvH4_6g20320
malus_domestica	MD12G1040400.v1.1 MD14G1039100.v1.1
prunus_persica	Prupe.7G094500_v2.0.a1
pyrus_communis	pycom12g03450 pycom14g03360
rosa_chinensis	RchiOBHm_Chr3g0475941
rosa_laevigata	RLG00000023798
rosa_multiflora	Rmu_sc0000441.1_g000087 Rmu_sc0000596.1_g000001 Rmu_sc0001809.1_g000063
rosa_roxburghii	Rroxscaffold_6G00405710
rosa_rugosa	Rorug03G0152000 Rorug03G0152100 Rorug03G0152100 Rorug03G0152200
rosa_samantha	Rh2BG524200 Rh3AG203000 Rh3BG232800 Rh3CG228300 Rh3DG228500
rosa_wichuraiana	Rw3G018460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	220
Acc16I	TGCGCA	1 cut(s)	976
Acc36I	ACCTGC	1 cut(s)	1150
Acc65I	GGTACC	1 cut(s)	1221
AccB1I	GGYRCC	1 cut(s)	1221
AccI	GTMKAC	1 cut(s)	224
AccII	CGCG	3 cut(s)	51, 109, 1563
AccIII	TCCGGA	1 cut(s)	701
AciI	CCGC	7 cut(s)	49, 81, 109, 296, 563, 1561, 1820
AclI	AACGTT	1 cut(s)	732
AclWI	GGATC	1 cut(s)	615
AcoI	YGGCCR	1 cut(s)	110
AcsI	RAATTY	4 cut(s)	452, 1038, 1805, 2150
AfaI	GTAC	6 cut(s)	173, 546, 778, 1223, 1660, 1733
AfiI	CCNNNNNNNGG	4 cut(s)	87, 701, 1125, 2255
AjnI	CCWGG	3 cut(s)	1105, 1194, 2179
AleI	CACNNNNGTG	1 cut(s)	1593
Alw21I	GWGCWC	3 cut(s)	57, 1321, 1775
Alw26I	GTCTC	5 cut(s)	357, 1143, 2071, 2141, 2228
Alw44I	GTGCAC	1 cut(s)	1771
AlwI	GGATC	1 cut(s)	615
Ama87I	CYCGRG	2 cut(s)	56, 217
Aor13HI	TCCGGA	1 cut(s)	701
AoxI	GGCC	1 cut(s)	110
ApaLI	GTGCAC	1 cut(s)	1771
ApeKI	GCWGC	7 cut(s)	139, 142, 560, 917, 1397, 1481, 1970
ApoI	RAATTY	4 cut(s)	452, 1038, 1805, 2150
Asp700I	GAANNNNTTC	3 cut(s)	65, 1508, 2150
Asp718I	GGTACC	1 cut(s)	1221
AspLEI	GCGC	2 cut(s)	977, 1792
AspS9I	GGNCC	5 cut(s)	7, 213, 1242, 1705, 1822
AsuC2I	CCSGG	1 cut(s)	2143
AsuHPI	GGTGA	4 cut(s)	380, 737, 1014, 2131
AvaI	CYCGRG	2 cut(s)	56, 217
AvaII	GGWCC	5 cut(s)	7, 213, 1242, 1705, 1822
AxyI	CCTNAGG	1 cut(s)	2235
BaeGI	GKGCMC	1 cut(s)	1775
BaeI	ACNNNNGTAYC	2 cut(s)	980, 1013
BanI	GGYRCC	1 cut(s)	1221
BanII	GRGCYC	2 cut(s)	57, 1321
BarI	GAAGNNNNNNTAC	2 cut(s)	1724, 1756
BbsI	GAAGAC	4 cut(s)	87, 428, 866, 1732
Bbv12I	GWGCWC	3 cut(s)	57, 1321, 1775
BbvCI	CCTCAGC	2 cut(s)	1785, 1926
BbvI	GCAGC	7 cut(s)	126, 154, 572, 904, 1384, 1468, 1982
BceAI	ACGGC	2 cut(s)	860, 1791
BcgI	CGANNNNNNTGC	2 cut(s)	72, 106
BciT130I	CCWGG	3 cut(s)	1107, 1196, 2181
BciVI	GTATCC	3 cut(s)	1008, 1550, 2011
BcnI	CCSGG	1 cut(s)	2143
BcoDI	GTCTC	5 cut(s)	357, 1143, 2071, 2141, 2228
BfaI	CTAG	4 cut(s)	719, 870, 1002, 2088
BfmI	CTRYAG	4 cut(s)	140, 261, 855, 1482
BfoI	RGCGCY	1 cut(s)	1793
BfuAI	ACCTGC	1 cut(s)	1150
BfuI	GTATCC	3 cut(s)	1008, 1550, 2011
BglII	AGATCT	2 cut(s)	1092, 2215
BisI	GCNGC	8 cut(s)	110, 140, 143, 561, 918, 1398, 1482, 1971
BlsI	GCNGC	8 cut(s)	111, 141, 144, 562, 919, 1399, 1483, 1972
Bme1390I	CCNGG	4 cut(s)	1107, 1196, 2143, 2181
Bme18I	GGWCC	5 cut(s)	7, 213, 1242, 1705, 1822
BmeT110I	CYCGRG	2 cut(s)	56, 217
BmgT120I	GGNCC	5 cut(s)	7, 213, 1242, 1705, 1822
BmiI	GGNNCC	5 cut(s)	215, 405, 1223, 1706, 2185
BmrFI	CCNGG	4 cut(s)	1107, 1196, 2143, 2181
BmrI	ACTGGG	2 cut(s)	1746, 2178
BmsI	GCATC	4 cut(s)	547, 986, 1630, 2087
BmuI	ACTGGG	2 cut(s)	1746, 2178
BpiI	GAAGAC	4 cut(s)	87, 428, 866, 1732
BpmI	CTGGAG	4 cut(s)	224, 1167, 1518, 1923
Bpu10I	CCTNAGC	2 cut(s)	1785, 1926
BpuEI	CTTGAG	1 cut(s)	1079
BpuMI	CCSGG	1 cut(s)	2143
BsaBI	GATNNNNATC	1 cut(s)	1680
BsaI	GGTCTC	1 cut(s)	2071
BsaJI	CCNNGG	6 cut(s)	218, 878, 965, 1106, 1797, 2179
BsaWI	WCCGGW	3 cut(s)	87, 389, 701
BsaXI	ACNNNNNCTCC	6 cut(s)	310, 340, 371, 401, 1461, 1491
Bsc4I	CCNNNNNNNGG	4 cut(s)	87, 701, 1125, 2255
Bse1I	ACTGG	5 cut(s)	558, 1058, 1501, 1752, 2173
Bse21I	CCTNAGG	1 cut(s)	2235
Bse3DI	GCAATG	3 cut(s)	1185, 1438, 1917
Bse8I	GATNNNNATC	1 cut(s)	1680
BseAI	TCCGGA	1 cut(s)	701
BseBI	CCWGG	3 cut(s)	1107, 1196, 2181
BseDI	CCNNGG	6 cut(s)	218, 878, 965, 1106, 1797, 2179
BseGI	GGATG	6 cut(s)	297, 562, 888, 1624, 1645, 1825
BseJI	GATNNNNATC	1 cut(s)	1680
BseLI	CCNNNNNNNGG	4 cut(s)	87, 701, 1125, 2255
BseMI	GCAATG	3 cut(s)	1185, 1438, 1917
BseMII	CTCAG	9 cut(s)	542, 585, 944, 1172, 1776, 1872, 1940, 1989, 2249
BseNI	ACTGG	5 cut(s)	558, 1058, 1501, 1752, 2173
BseRI	GAGGAG	5 cut(s)	331, 334, 337, 392, 2223
BseSI	GKGCMC	1 cut(s)	1775
BseX3I	CGGCCG	1 cut(s)	110
BseXI	GCAGC	7 cut(s)	126, 154, 572, 904, 1384, 1468, 1982
Bsh1236I	CGCG	3 cut(s)	51, 109, 1563
Bsh1285I	CGRYCG	4 cut(s)	49, 81, 92, 113
BshFI	GGCC	1 cut(s)	112
BshNI	GGYRCC	1 cut(s)	1221
BsiEI	CGRYCG	4 cut(s)	49, 81, 92, 113
BsiHKAI	GWGCWC	3 cut(s)	57, 1321, 1775
BsiHKCI	CYCGRG	2 cut(s)	56, 217
BsiSI	CCGG	5 cut(s)	88, 182, 390, 702, 2142
BslFI	GGGAC	1 cut(s)	1718
BslI	CCNNNNNNNGG	4 cut(s)	87, 701, 1125, 2255
BsmAI	GTCTC	5 cut(s)	357, 1143, 2071, 2141, 2228
BsmBI	CGTCTC	2 cut(s)	357, 2228
BsmFI	GGGAC	1 cut(s)	1718
BsmI	GAATGC	3 cut(s)	262, 784, 1328
BsnI	GGCC	1 cut(s)	112
Bso31I	GGTCTC	1 cut(s)	2071
BsoBI	CYCGRG	2 cut(s)	56, 217
Bsp1286I	GDGCHC	3 cut(s)	57, 1321, 1775
Bsp13I	TCCGGA	1 cut(s)	701
Bsp143I	GATC	8 cut(s)	120, 607, 982, 1092, 1425, 1847, 2039, 2215
Bsp19I	CCATGG	2 cut(s)	965, 1797
BspACI	CCGC	7 cut(s)	49, 81, 109, 296, 563, 1561, 1820
BspANI	GGCC	1 cut(s)	112
BspCNI	CTCAG	9 cut(s)	541, 586, 943, 1171, 1777, 1873, 1939, 1990, 2248
BspEI	TCCGGA	1 cut(s)	701
BspFNI	CGCG	3 cut(s)	51, 109, 1563
BspLI	GGNNCC	5 cut(s)	215, 405, 1223, 1706, 2185
BspMAI	CTGCAG	2 cut(s)	144, 1486
BspMI	ACCTGC	1 cut(s)	1150
BspPI	GGATC	1 cut(s)	615
BspQI	GCTCTTC	2 cut(s)	1023, 1326
BspT107I	GGYRCC	1 cut(s)	1221
BspTNI	GGTCTC	1 cut(s)	2071
BsrDI	GCAATG	3 cut(s)	1185, 1438, 1917
BsrI	ACTGG	5 cut(s)	558, 1058, 1501, 1752, 2173
BssECI	CCNNGG	6 cut(s)	218, 878, 965, 1106, 1797, 2179
BssMI	GATC	8 cut(s)	120, 607, 982, 1092, 1425, 1847, 2039, 2215
BssT1I	CCWWGG	3 cut(s)	878, 965, 1797
Bst2UI	CCWGG	3 cut(s)	1107, 1196, 2181
Bst4CI	ACNGT	3 cut(s)	368, 387, 476
Bst6I	CTCTTC	3 cut(s)	1023, 1326, 1728
BstC8I	GCNNGC	3 cut(s)	53, 1235, 1794
BstDSI	CCRYGG	2 cut(s)	965, 1797
BstF5I	GGATG	6 cut(s)	297, 562, 888, 1624, 1645, 1825
BstFNI	CGCG	3 cut(s)	51, 109, 1563
BstH2I	RGCGCY	1 cut(s)	1793
BstHHI	GCGC	2 cut(s)	977, 1792
BstKTI	GATC	8 cut(s)	123, 610, 985, 1095, 1428, 1850, 2042, 2218
BstMAI	GTCTC	5 cut(s)	357, 1143, 2071, 2141, 2228
BstMBI	GATC	8 cut(s)	120, 607, 982, 1092, 1425, 1847, 2039, 2215
BstMCI	CGRYCG	4 cut(s)	49, 81, 92, 113
BstMWI	GCNNNNNNNGC	7 cut(s)	109, 148, 595, 926, 935, 1187, 1325
BstNI	CCWGG	3 cut(s)	1107, 1196, 2181
BstNSI	RCATGY	1 cut(s)	851
BstSCI	CCNGG	4 cut(s)	1105, 1194, 2141, 2179
BstSFI	CTRYAG	4 cut(s)	140, 261, 855, 1482
BstSLI	GKGCMC	1 cut(s)	1775
BstUI	CGCG	3 cut(s)	51, 109, 1563
BstV1I	GCAGC	7 cut(s)	126, 154, 572, 904, 1384, 1468, 1982
BstV2I	GAAGAC	4 cut(s)	87, 428, 866, 1732
BstX2I	RGATCY	2 cut(s)	1092, 2215
BstXI	CCANNNNNNTGG	1 cut(s)	1265
BstYI	RGATCY	2 cut(s)	1092, 2215
BstZI	CGGCCG	1 cut(s)	110
Bsu36I	CCTNAGG	1 cut(s)	2235
BsuI	GTATCC	3 cut(s)	1008, 1550, 2011
BsuRI	GGCC	1 cut(s)	112
BtgI	CCRYGG	2 cut(s)	965, 1797
BtgZI	GCGATG	1 cut(s)	1252
BtsCI	GGATG	6 cut(s)	297, 562, 888, 1624, 1645, 1825
BtsI	GCAGTG	1 cut(s)	903
BtsIMutI	CAGTG	5 cut(s)	481, 551, 903, 1759, 2166
BveI	ACCTGC	1 cut(s)	1150
Cac8I	GCNNGC	3 cut(s)	53, 1235, 1794
CfoI	GCGC	2 cut(s)	977, 1792
Cfr13I	GGNCC	5 cut(s)	7, 213, 1242, 1705, 1822
Csp6I	GTAC	6 cut(s)	172, 545, 777, 1222, 1659, 1732
CviQI	GTAC	6 cut(s)	172, 545, 777, 1222, 1659, 1732
DpnI	GATC	8 cut(s)	122, 609, 984, 1094, 1427, 1849, 2041, 2217
DpnII	GATC	8 cut(s)	120, 607, 982, 1092, 1425, 1847, 2039, 2215
DrdI	GACNNNNNNGTC	1 cut(s)	220
DseDI	GACNNNNNNGTC	1 cut(s)	220
EaeI	YGGCCR	1 cut(s)	110
EagI	CGGCCG	1 cut(s)	110
Eam1104I	CTCTTC	3 cut(s)	1023, 1326, 1728
EarI	CTCTTC	3 cut(s)	1023, 1326, 1728
EciI	GGCGGA	1 cut(s)	311
Ecl136II	GAGCTC	2 cut(s)	55, 1319
EclXI	CGGCCG	1 cut(s)	110
Eco130I	CCWWGG	3 cut(s)	878, 965, 1797
Eco24I	GRGCYC	2 cut(s)	57, 1321
Eco31I	GGTCTC	1 cut(s)	2071
Eco47I	GGWCC	5 cut(s)	7, 213, 1242, 1705, 1822
Eco52I	CGGCCG	1 cut(s)	110
Eco53kI	GAGCTC	2 cut(s)	55, 1319
Eco81I	CCTNAGG	1 cut(s)	2235
Eco88I	CYCGRG	2 cut(s)	56, 217
EcoICRI	GAGCTC	2 cut(s)	55, 1319
EcoRI	GAATTC	1 cut(s)	2150
EcoRII	CCWGG	3 cut(s)	1105, 1194, 2179
EcoT14I	CCWWGG	3 cut(s)	878, 965, 1797
EcoT38I	GRGCYC	2 cut(s)	57, 1321
ErhI	CCWWGG	3 cut(s)	878, 965, 1797
Esp3I	CGTCTC	2 cut(s)	357, 2228
FaqI	GGGAC	1 cut(s)	1718
FblI	GTMKAC	1 cut(s)	224
Fnu4HI	GCNGC	8 cut(s)	110, 140, 143, 561, 918, 1398, 1482, 1971
FokI	GGATG	6 cut(s)	304, 569, 895, 1631, 1652, 1812
FriOI	GRGCYC	2 cut(s)	57, 1321
Fsp4HI	GCNGC	8 cut(s)	110, 140, 143, 561, 918, 1398, 1482, 1971
FspBI	CTAG	4 cut(s)	719, 870, 1002, 2088
FspI	TGCGCA	1 cut(s)	976
GlaI	GCGC	2 cut(s)	976, 1791
GluI	GCNGC	8 cut(s)	110, 140, 143, 561, 918, 1398, 1482, 1971
GsuI	CTGGAG	4 cut(s)	224, 1167, 1518, 1923
HaeII	RGCGCY	1 cut(s)	1793
HaeIII	GGCC	1 cut(s)	112
HapII	CCGG	5 cut(s)	88, 182, 390, 702, 2142
HhaI	GCGC	2 cut(s)	977, 1792
Hin6I	GCGC	2 cut(s)	975, 1790
HinP1I	GCGC	2 cut(s)	975, 1790
HincII	GTYRAC	1 cut(s)	225
HindII	GTYRAC	1 cut(s)	225
HindIII	AAGCTT	1 cut(s)	652
HpaII	CCGG	5 cut(s)	88, 182, 390, 702, 2142
HphI	GGTGA	4 cut(s)	380, 737, 1014, 2131
Hpy166II	GTNNAC	5 cut(s)	213, 225, 517, 665, 1773
Hpy8I	GTNNAC	5 cut(s)	213, 225, 517, 665, 1773
Hpy99I	CGWCG	4 cut(s)	103, 118, 181, 229
HpyAV	CCTTC	7 cut(s)	52, 190, 281, 484, 705, 1468, 1546
HpyCH4III	ACNGT	3 cut(s)	368, 387, 476
HpyCH4IV	ACGT	1 cut(s)	732
HpyF10VI	GCNNNNNNNGC	7 cut(s)	109, 148, 595, 926, 935, 1187, 1325
HpySE526I	ACGT	1 cut(s)	732
HspAI	GCGC	2 cut(s)	975, 1790
Kpn2I	TCCGGA	1 cut(s)	701
KpnI	GGTACC	1 cut(s)	1225
Kzo9I	GATC	8 cut(s)	120, 607, 982, 1092, 1425, 1847, 2039, 2215
LguI	GCTCTTC	2 cut(s)	1023, 1326
LmnI	GCTCC	3 cut(s)	403, 1316, 1520
Lsp1109I	GCAGC	7 cut(s)	126, 154, 572, 904, 1384, 1468, 1982
LweI	GCATC	4 cut(s)	547, 986, 1630, 2087
MaeI	CTAG	4 cut(s)	719, 870, 1002, 2088
MaeII	ACGT	1 cut(s)	732
MaeIII	GTNAC	7 cut(s)	534, 859, 949, 1049, 1357, 1595, 2189
MalI	GATC	8 cut(s)	122, 609, 984, 1094, 1427, 1849, 2041, 2217
MboI	GATC	8 cut(s)	120, 607, 982, 1092, 1425, 1847, 2039, 2215
MfeI	CAATTG	1 cut(s)	1351
MflI	RGATCY	2 cut(s)	1092, 2215
MhlI	GDGCHC	3 cut(s)	57, 1321, 1775
MlyI	GAGTC	3 cut(s)	542, 716, 1678
MmeI	TCCRAC	1 cut(s)	249
MroI	TCCGGA	1 cut(s)	701
MroXI	GAANNNNTTC	3 cut(s)	65, 1508, 2150
MseI	TTAA	8 cut(s)	468, 735, 752, 1077, 1089, 1254, 1460, 1953
MslI	CAYNNNNRTG	3 cut(s)	789, 1593, 1713
MspA1I	CMGCKG	2 cut(s)	563, 1397
MspI	CCGG	5 cut(s)	88, 182, 390, 702, 2142
MspR9I	CCNGG	4 cut(s)	1107, 1196, 2143, 2181
MunI	CAATTG	1 cut(s)	1351
Mva1269I	GAATGC	3 cut(s)	262, 784, 1328
MvaI	CCWGG	3 cut(s)	1107, 1196, 2181
MvnI	CGCG	3 cut(s)	51, 109, 1563
MwoI	GCNNNNNNNGC	7 cut(s)	109, 148, 595, 926, 935, 1187, 1325
NciI	CCSGG	1 cut(s)	2143
NcoI	CCATGG	2 cut(s)	965, 1797
NdeII	GATC	8 cut(s)	120, 607, 982, 1092, 1425, 1847, 2039, 2215
NlaIV	GGNNCC	5 cut(s)	215, 405, 1223, 1706, 2185
NmeAIII	GCCGAG	1 cut(s)	53
NmuCI	GTSAC	4 cut(s)	534, 859, 1595, 2189
NsbI	TGCGCA	1 cut(s)	976
NspI	RCATGY	1 cut(s)	851
OliI	CACNNNNGTG	1 cut(s)	1593
PaeR7I	CTCGAG	1 cut(s)	56
PciSI	GCTCTTC	2 cut(s)	1023, 1326
PctI	GAATGC	3 cut(s)	262, 784, 1328
PdmI	GAANNNNTTC	3 cut(s)	65, 1508, 2150
PfeI	GAWTC	8 cut(s)	160, 229, 524, 901, 1447, 1681, 1718, 1983
PfoI	TCCNGGA	1 cut(s)	1194
PkrI	GCNGC	8 cut(s)	111, 141, 144, 562, 919, 1399, 1483, 1972
PleI	GAGTC	3 cut(s)	541, 715, 1677
PpsI	GAGTC	3 cut(s)	541, 715, 1677
Psp124BI	GAGCTC	2 cut(s)	57, 1321
Psp1406I	AACGTT	1 cut(s)	732
Psp6I	CCWGG	3 cut(s)	1105, 1194, 2179
PspGI	CCWGG	3 cut(s)	1105, 1194, 2179
PspN4I	GGNNCC	5 cut(s)	215, 405, 1223, 1706, 2185
PspPI	GGNCC	5 cut(s)	7, 213, 1242, 1705, 1822
PstI	CTGCAG	2 cut(s)	144, 1486
PsuI	RGATCY	2 cut(s)	1092, 2215
PvuII	CAGCTG	1 cut(s)	1397
RsaI	GTAC	6 cut(s)	173, 546, 778, 1223, 1660, 1733
RsaNI	GTAC	6 cut(s)	172, 545, 777, 1222, 1659, 1732
RseI	CAYNNNNRTG	3 cut(s)	789, 1593, 1713
SacI	GAGCTC	2 cut(s)	57, 1321
SalI	GTCGAC	1 cut(s)	223
SapI	GCTCTTC	2 cut(s)	1023, 1326
SaqAI	TTAA	8 cut(s)	468, 735, 752, 1077, 1089, 1254, 1460, 1953
SatI	GCNGC	8 cut(s)	110, 140, 143, 561, 918, 1398, 1482, 1971
Sau3AI	GATC	8 cut(s)	120, 607, 982, 1092, 1425, 1847, 2039, 2215
Sau96I	GGNCC	5 cut(s)	7, 213, 1242, 1705, 1822
SchI	GAGTC	3 cut(s)	542, 716, 1678
ScrFI	CCNGG	4 cut(s)	1107, 1196, 2143, 2181
SduI	GDGCHC	3 cut(s)	57, 1321, 1775
SfaNI	GCATC	4 cut(s)	547, 986, 1630, 2087
SfcI	CTRYAG	4 cut(s)	140, 261, 855, 1482
Sfr274I	CTCGAG	1 cut(s)	56
SinI	GGWCC	5 cut(s)	7, 213, 1242, 1705, 1822
SlaI	CTCGAG	1 cut(s)	56
SmiMI	CAYNNNNRTG	3 cut(s)	789, 1593, 1713
SmlI	CTYRAG	2 cut(s)	56, 1058
SmoI	CTYRAG	2 cut(s)	56, 1058
SsiI	CCGC	7 cut(s)	49, 81, 109, 296, 563, 1561, 1820
SspMI	CTAG	4 cut(s)	719, 870, 1002, 2088
SstI	GAGCTC	2 cut(s)	57, 1321
StyD4I	CCNGG	4 cut(s)	1105, 1194, 2141, 2179
StyI	CCWWGG	3 cut(s)	878, 965, 1797
TaaI	ACNGT	3 cut(s)	368, 387, 476
TaiI	ACGT	1 cut(s)	735
TaqI	TCGA	6 cut(s)	45, 57, 123, 224, 412, 913
TaqII	GACCGA	2 cut(s)	24, 1259
TatI	WGTACW	2 cut(s)	776, 1658
TauI	GCSGC	1 cut(s)	112
TfiI	GAWTC	8 cut(s)	160, 229, 524, 901, 1447, 1681, 1718, 1983
Tru1I	TTAA	8 cut(s)	468, 735, 752, 1077, 1089, 1254, 1460, 1953
Tru9I	TTAA	8 cut(s)	468, 735, 752, 1077, 1089, 1254, 1460, 1953
TscAI	CASTG	5 cut(s)	481, 558, 903, 1759, 2173
TseFI	GTSAC	4 cut(s)	534, 859, 1595, 2189
TseI	GCWGC	7 cut(s)	139, 142, 560, 917, 1397, 1481, 1970
Tsp45I	GTSAC	4 cut(s)	534, 859, 1595, 2189
TspGWI	ACGGA	5 cut(s)	131, 1037, 1158, 2036, 2210
TspRI	CASTG	5 cut(s)	481, 558, 903, 1759, 2173
VneI	GTGCAC	1 cut(s)	1771
VpaK11BI	GGWCC	5 cut(s)	7, 213, 1242, 1705, 1822
XapI	RAATTY	4 cut(s)	452, 1038, 1805, 2150
XbaI	TCTAGA	1 cut(s)	718
XceI	RCATGY	1 cut(s)	851
XhoI	CTCGAG	1 cut(s)	56
XmiI	GTMKAC	1 cut(s)	224
XmnI	GAANNNNTTC	3 cut(s)	65, 1508, 2150
XspI	CTAG	4 cut(s)	719, 870, 1002, 2088

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.