Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0007806

Physical Location & Seq

Genomic Coordinates Forward (+)

3256896 .. 3261627

Gene Structure 4732 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g03450.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

ATGGGAAGCGAAGGCCAAGCTTCGACCTCCTCCAACGCCTTCTCCTTCATATCGAAAGGGTGGAGGGAAGTGAAGGACTCTGCCGACGAGGATCTCCAATTGATGAAGCACCGGGCCAACGAGTTCAAGAACCTAGCGACGTCGTTCGACCGCGAGCTCGAGAACCTGTTCAAGTTTAACTCCGCGTCCTCGGCGGGGATTCGGTCGTCGGCGTCGCCGCCAGCAGAGATTGACTTCGTCAAGAAGCTGCAGCCGAAGCTGTCGGAATTTCGGAGGGTGTACTCGTCGCCGGACTTCAGCAAGAAGGTTCTGGAGAAGTGGAGCCCCAGGTCGAGGATCCGGATCAATTTGTCGGCGATAAAGAATGCGCTGGTGTCGGAGGTGGAGGACAGGGATGGGGTTATGGAATTTAATAGGGGTATTAGGGGAAGGCCATTGAAGTTCAGTGAGTTTTGGGGAGAGTGGAAGGGAGAGGGTGAGGGGGAGGATGAGGAGAGACAATCCATTAAGTACTGGGAGCCAATTCGGGCGTTGAAGACGAGATTGAAAGAGTTCGAAGAGCGGGAATTTCTCGGTGGATTTAAGAACAGTGAGTTTGTGGAGAAATTCAAGTCCAGCTTGAAGTCAATTTACAGGGAGCCAGAGGAGTCAAAGGCAGTACCTCCATTGGATGTGACAGAACTTTTGGCATGTTTGGTTAGGCAATCTGAGCCTTTTCTCGATCAACTTGGCATTAGGAGAAATGTGTGTGAGAAACTAGTGGAAAGCTTGTGCAGCAAACACAAGAACCAAGTTCTGCACTCACATTCTTCTGGAGAGTCATCTCTTATAGACAGTGAAAACATGAATGATGAATTAGATTTAAGGATAGCCAGCGTCATCCAAAGCACAGGGCATTCTTATGATGGTGGGTTTTGGACAGACCATGCAAAGCATGACCAGTTAGATGAGAAAAGACATGTTGCTATTGTCACAACTGCTAGTCTTCCTTGGATGACAGGAACAGCAGTGAATCCACTGTTTCGTGCTGCATATCTTGCAGAGTCTGCAAAACAGAATGTTACATTATTAGTTCCATGGCTTTGTAAATCAGATCAAGAACTTGTATATCCTAGCAACATTACTTTTACTTCACCAGAAGAGCAGGAAATTTATATCCGTAACTGGCTTGAGGAAAGGATTGGCTTTAAAGCGGACTTTAAGATATCATTTTATCCAGGAAAGTTTTCAAAAGCAAGGCGAAGCATTTTACCAGCTGGGGACACTACTCAGTTTATTCAGTCCAAGGATGCTGACATTGCTATCCTGGAAGAACCGGAACACTTGAATTGGTATCATCATGGTAAGCGTTGGACTGATAAATTTAACCATGTTGTTGGTGTTGTTCACACAAATTACTTGGAATATATCAAGAGGGAGAAGAATGGTGCTCTCCAAGCCTTCTTTGTGAAACACATAAACAATTGGGTCACAAGAGCATACTGTGACAAGGTTCTTCGCCTTTCCTCTGCCACACAGGATTTACCTAAGTCTCTGATTTGCAATGTCCACGGTGTGAATCCCAAGTTCTTGAGAATTGGAGAAAAGGTCGCTGCAGAAAGGGAACTTGGACAGGAAGCATTCTCAAAAGGAGCATATTTCTTAGGGAAGATGGTCTGGGCAAAGGGATACCGTGAGCTTATAGATGTGTTGGCAAAGCACAAGTGTGACCTTGATGGCTTCAAGTTGGACGTGTATGGAAATGGAGAGGATGCCAATGAAGTTCAGAGTACGGCTAAAAGCTTGGATTTAAATCTCAACTTTCTGAAAGGAAGAGACCATGCAGATCATTCTCTTCACGGGTACAAAGTCTTCATAAATCCCAGCGTTAGTGATGTGCTGTGCACGGCTACTGCTGAGGCTCTTGCTATGGGAAAATTTGTAATTTGTGCGGATCGATCCATCAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0006643 GO:0006664 GO:0006725 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008194 GO:0008378 GO:0008610 GO:0009058 GO:0009247 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009698 GO:0009699 GO:0009707 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009808 GO:0009809 GO:0009867 GO:0009941 GO:0009987 GO:0010033 GO:0010109 GO:0016020 GO:0016053 GO:0016740 GO:0016757 GO:0016758 GO:0019222 GO:0019374 GO:0019375 GO:0019438 GO:0019748 GO:0019752 GO:0019867 GO:0023052 GO:0031090 GO:0031323 GO:0031407 GO:0031408 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032787 GO:0032870 GO:0035250 GO:0042170 GO:0042221 GO:0042548 GO:0042550 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043467 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046394 GO:0046467 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0072330 GO:0098588 GO:0098805 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576 GO:1901700 GO:1901701 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko01100 map00561 map01100

Pfam Domains

Protein Families

Glyco_trans_1_4 Glycos_transf_1

Protein Analysis

650

Amino Acids

73.86

Weight (kDa)

6.85

Isoelectric Point (pI)

39.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007806)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11670 AT3G11670
fragaria_vesca	FvH4_6g20320
malus_domestica	MD12G1040400.v1.1 MD14G1039100.v1.1
prunus_persica	Prupe.7G094500_v2.0.a1
pyrus_communis	pycom12g03450 pycom14g03360
rosa_chinensis	RchiOBHm_Chr3g0475941
rosa_laevigata	RLG00000023798
rosa_multiflora	Rmu_sc0000441.1_g000087 Rmu_sc0000596.1_g000001 Rmu_sc0001809.1_g000063
rosa_roxburghii	Rroxscaffold_6G00405710
rosa_rugosa	Rorug03G0152000 Rorug03G0152100 Rorug03G0152100 Rorug03G0152200
rosa_samantha	Rh2BG524200 Rh3AG203000 Rh3BG232800 Rh3CG228300 Rh3DG228500
rosa_wichuraiana	Rw3G018460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	143
AccBSI	CCGCTC	1 cut(s)	562
AccII	CGCG	2 cut(s)	153, 185
AccIII	TCCGGA	1 cut(s)	339
AciI	CCGC	7 cut(s)	151, 183, 194, 218, 562, 1193, 1931
AclWI	GGATC	6 cut(s)	99, 331, 344, 350, 1932, 1941
AcsI	RAATTY	7 cut(s)	266, 407, 566, 605, 1149, 1361, 1916
AcuI	CTGAAG	1 cut(s)	280
AcyI	GRCGYC	2 cut(s)	140, 212
AdeI	CACNNNGTG	1 cut(s)	1555
AfaI	GTAC	5 cut(s)	281, 512, 660, 1771, 1844
AfiI	CCNNNNNNNGG	2 cut(s)	195, 333
AflIII	ACRYGT	2 cut(s)	958, 1731
AhlI	ACTAGT	1 cut(s)	757
AjiI	CACGTC	1 cut(s)	1732
AjnI	CCWGG	3 cut(s)	326, 1216, 1305
AjuI	GAANNNNNNNTTGG	2 cut(s)	1590, 1622
AleI	CACNNNNGTG	1 cut(s)	1704
AluBI	AGCT	9 cut(s)	20, 157, 247, 259, 618, 768, 1256, 1678, 1782
AluI	AGCT	9 cut(s)	20, 157, 247, 259, 618, 768, 1256, 1678, 1782
Alw21I	GWGCWC	3 cut(s)	159, 1432, 1886
Alw26I	GTCTC	3 cut(s)	490, 1536, 1809
Alw44I	GTGCAC	1 cut(s)	1882
AlwI	GGATC	6 cut(s)	99, 331, 344, 350, 1932, 1941
AlwNI	CAGNNNCTG	1 cut(s)	1046
Ama87I	CYCGRG	1 cut(s)	158
Aor13HI	TCCGGA	1 cut(s)	339
AoxI	GGCC	3 cut(s)	13, 114, 431
ApaLI	GTGCAC	1 cut(s)	1882
ApeKI	GCWGC	5 cut(s)	247, 250, 774, 1028, 1592
ApoI	RAATTY	7 cut(s)	266, 407, 566, 605, 1149, 1361, 1916
ArsI	GACNNNNNNTTYG	2 cut(s)	667, 699
Asp700I	GAANNNNTTC	3 cut(s)	167, 551, 1225
AspLEI	GCGC	1 cut(s)	370
AspS9I	GGNCC	1 cut(s)	114
AsuC2I	CCSGG	1 cut(s)	113
AsuHPI	GGTGA	2 cut(s)	488, 1125
AsuII	TTCGAA	1 cut(s)	555
AvaI	CYCGRG	1 cut(s)	158
BaeGI	GKGCMC	1 cut(s)	1886
BamHI	GGATCC	1 cut(s)	336
BanII	GRGCYC	2 cut(s)	159, 326
BarI	GAAGNNNNNNTAC	4 cut(s)	614, 646, 1835, 1867
BbsI	GAAGAC	3 cut(s)	542, 977, 1843
Bbv12I	GWGCWC	3 cut(s)	159, 1432, 1886
BbvCI	CCTCAGC	1 cut(s)	1896
BbvI	GCAGC	5 cut(s)	234, 262, 786, 1015, 1579
BccI	CCATC	5 cut(s)	389, 899, 1645, 1709, 1949
BceAI	ACGGC	2 cut(s)	1788, 1902
BciT130I	CCWGG	3 cut(s)	328, 1218, 1307
BciVI	GTATCC	1 cut(s)	1661
BcnI	CCSGG	1 cut(s)	113
BcoDI	GTCTC	3 cut(s)	490, 1536, 1809
BcuI	ACTAGT	1 cut(s)	757
BfaI	CTAG	4 cut(s)	134, 758, 981, 1113
BfmI	CTRYAG	2 cut(s)	248, 1593
BfuI	GTATCC	1 cut(s)	1661
BisI	GCNGC	6 cut(s)	218, 248, 251, 775, 1029, 1593
BlsI	GCNGC	6 cut(s)	219, 249, 252, 776, 1030, 1594
BmcAI	AGTACT	1 cut(s)	512
Bme1390I	CCNGG	4 cut(s)	113, 328, 1218, 1307
BmeT110I	CYCGRG	1 cut(s)	158
BmgBI	CACGTC	1 cut(s)	1732
BmgT120I	GGNCC	1 cut(s)	114
BmiI	GGNNCC	4 cut(s)	323, 338, 519, 639
BmrFI	CCNGG	4 cut(s)	113, 328, 1218, 1307
BmrI	ACTGGG	1 cut(s)	523
BmsI	GCATC	2 cut(s)	1279, 1741
BmuI	ACTGGG	1 cut(s)	523
BpiI	GAAGAC	3 cut(s)	542, 977, 1843
BpmI	CTGGAG	2 cut(s)	332, 834
Bpu10I	CCTNAGC	1 cut(s)	1896
Bpu14I	TTCGAA	1 cut(s)	555
BpuEI	CTTGAG	2 cut(s)	1190, 1591
BpuMI	CCSGG	1 cut(s)	113
Bsa29I	ATCGAT	1 cut(s)	1936
BsaBI	GATNNNNATC	2 cut(s)	341, 1791
BsaHI	GRCGYC	2 cut(s)	140, 212
BsaI	GGTCTC	1 cut(s)	1809
BsaJI	CCNNGG	6 cut(s)	189, 326, 989, 1076, 1284, 1549
BsaWI	WCCGGW	2 cut(s)	339, 1315
BsaXI	ACNNNNNCTCC	4 cut(s)	26, 56, 1572, 1602
Bsc4I	CCNNNNNNNGG	2 cut(s)	195, 333
Bse1I	ACTGG	3 cut(s)	518, 940, 1169
Bse3DI	GCAATG	2 cut(s)	1296, 1549
Bse8I	GATNNNNATC	2 cut(s)	341, 1791
BseAI	TCCGGA	1 cut(s)	339
BseBI	CCWGG	3 cut(s)	328, 1218, 1307
BseCI	ATCGAT	1 cut(s)	1936
BseDI	CCNNGG	6 cut(s)	189, 326, 989, 1076, 1284, 1549
BseGI	GGATG	7 cut(s)	400, 493, 676, 879, 999, 1294, 1756
BseJI	GATNNNNATC	2 cut(s)	341, 1791
BseLI	CCNNNNNNNGG	2 cut(s)	195, 333
BseMI	GCAATG	2 cut(s)	1296, 1549
BseMII	CTCAG	3 cut(s)	699, 1283, 1887
BseNI	ACTGG	3 cut(s)	518, 940, 1169
BseRI	GAGGAG	3 cut(s)	19, 506, 659
BseSI	GKGCMC	1 cut(s)	1886
BseXI	GCAGC	5 cut(s)	234, 262, 786, 1015, 1579
BseYI	CCCAGC	2 cut(s)	1256, 1862
BsgI	GTGCAG	2 cut(s)	782, 793
Bsh1236I	CGCG	2 cut(s)	153, 185
Bsh1285I	CGRYCG	2 cut(s)	151, 206
BshFI	GGCC	3 cut(s)	15, 116, 433
BshVI	ATCGAT	1 cut(s)	1936
BsiEI	CGRYCG	2 cut(s)	151, 206
BsiHKAI	GWGCWC	3 cut(s)	159, 1432, 1886
BsiHKCI	CYCGRG	1 cut(s)	158
BsiSI	CCGG	4 cut(s)	112, 290, 340, 1316
BslFI	GGGAC	1 cut(s)	1274
BslI	CCNNNNNNNGG	2 cut(s)	195, 333
BsmAI	GTCTC	3 cut(s)	490, 1536, 1809
BsmFI	GGGAC	1 cut(s)	1274
BsmI	GAATGC	3 cut(s)	370, 895, 1619
BsnI	GGCC	3 cut(s)	15, 116, 433
Bso31I	GGTCTC	1 cut(s)	1809
BsoBI	CYCGRG	1 cut(s)	158
Bsp119I	TTCGAA	1 cut(s)	555
Bsp1286I	GDGCHC	4 cut(s)	159, 326, 1432, 1886
Bsp13I	TCCGGA	1 cut(s)	339
Bsp143I	GATC	8 cut(s)	91, 336, 342, 721, 1093, 1825, 1933, 1937
Bsp19I	CCATGG	1 cut(s)	1076
BspACI	CCGC	7 cut(s)	151, 183, 194, 218, 562, 1193, 1931
BspANI	GGCC	3 cut(s)	15, 116, 433
BspCNI	CTCAG	3 cut(s)	700, 1282, 1888
BspDI	ATCGAT	1 cut(s)	1936
BspEI	TCCGGA	1 cut(s)	339
BspFNI	CGCG	2 cut(s)	153, 185
BspLI	GGNNCC	4 cut(s)	323, 338, 519, 639
BspMAI	CTGCAG	2 cut(s)	252, 1597
BspPI	GGATC	6 cut(s)	99, 331, 344, 350, 1932, 1941
BspQI	GCTCTTC	2 cut(s)	552, 1134
BspT104I	TTCGAA	1 cut(s)	555
BspTNI	GGTCTC	1 cut(s)	1809
BsrBI	CCGCTC	1 cut(s)	562
BsrDI	GCAATG	2 cut(s)	1296, 1549
BsrI	ACTGG	3 cut(s)	518, 940, 1169
BssECI	CCNNGG	6 cut(s)	189, 326, 989, 1076, 1284, 1549
BssMI	GATC	8 cut(s)	91, 336, 342, 721, 1093, 1825, 1933, 1937
BssNI	GRCGYC	2 cut(s)	140, 212
BssT1I	CCWWGG	3 cut(s)	989, 1076, 1284
Bst2UI	CCWGG	3 cut(s)	328, 1218, 1307
Bst4CI	ACNGT	6 cut(s)	590, 836, 1020, 1484, 1553, 1673
Bst6I	CTCTTC	4 cut(s)	552, 1134, 1807, 1839
BstACI	GRCGYC	2 cut(s)	140, 212
BstAPI	GCANNNNNTGC	2 cut(s)	1037, 1046
BstBI	TTCGAA	1 cut(s)	555
BstC8I	GCNNGC	3 cut(s)	155, 222, 874
BstDEI	CTNAG	5 cut(s)	708, 1269, 1527, 1642, 1896
BstDSI	CCRYGG	2 cut(s)	1076, 1549
BstF5I	GGATG	7 cut(s)	400, 493, 676, 879, 999, 1294, 1756
BstFNI	CGCG	2 cut(s)	153, 185
BstHHI	GCGC	1 cut(s)	370
BstKTI	GATC	8 cut(s)	94, 339, 345, 724, 1096, 1828, 1936, 1940
BstMAI	GTCTC	3 cut(s)	490, 1536, 1809
BstMBI	GATC	8 cut(s)	91, 336, 342, 721, 1093, 1825, 1933, 1937
BstMCI	CGRYCG	2 cut(s)	151, 206
BstMWI	GCNNNNNNNGC	8 cut(s)	191, 256, 709, 774, 1037, 1046, 1298, 1436
BstNI	CCWGG	3 cut(s)	328, 1218, 1307
BstNSI	RCATGY	2 cut(s)	693, 962
BstSCI	CCNGG	4 cut(s)	111, 326, 1216, 1305
BstSFI	CTRYAG	2 cut(s)	248, 1593
BstSLI	GKGCMC	1 cut(s)	1886
BstUI	CGCG	2 cut(s)	153, 185
BstV1I	GCAGC	5 cut(s)	234, 262, 786, 1015, 1579
BstV2I	GAAGAC	3 cut(s)	542, 977, 1843
BstX2I	RGATCY	2 cut(s)	91, 336
BstXI	CCANNNNNNTGG	1 cut(s)	1376
BstYI	RGATCY	2 cut(s)	91, 336
Bsu15I	ATCGAT	1 cut(s)	1936
BsuI	GTATCC	1 cut(s)	1661
BsuRI	GGCC	3 cut(s)	15, 116, 433
BsuTUI	ATCGAT	1 cut(s)	1936
BtgI	CCRYGG	2 cut(s)	1076, 1549
BtrI	CACGTC	1 cut(s)	1732
BtsCI	GGATG	7 cut(s)	400, 493, 676, 879, 999, 1294, 1756
BtsI	GCAGTG	1 cut(s)	1014
BtsIMutI	CAGTG	5 cut(s)	451, 595, 841, 1014, 1016
Cac8I	GCNNGC	3 cut(s)	155, 222, 874
CaiI	CAGNNNCTG	1 cut(s)	1046
CfoI	GCGC	1 cut(s)	370
Cfr13I	GGNCC	1 cut(s)	114
ClaI	ATCGAT	1 cut(s)	1936
CseI	GACGC	3 cut(s)	174, 201, 865
Csp6I	GTAC	5 cut(s)	280, 511, 659, 1770, 1843
CviAII	CATG	9 cut(s)	690, 844, 926, 935, 959, 1077, 1340, 1370, 1820
CviQI	GTAC	5 cut(s)	280, 511, 659, 1770, 1843
DdeI	CTNAG	5 cut(s)	708, 1269, 1527, 1642, 1896
DpnI	GATC	8 cut(s)	93, 338, 344, 723, 1095, 1827, 1935, 1939
DpnII	GATC	8 cut(s)	91, 336, 342, 721, 1093, 1825, 1933, 1937
DraI	TTTAAA	2 cut(s)	1189, 1791
DraIII	CACNNNGTG	1 cut(s)	1555
Eam1104I	CTCTTC	4 cut(s)	552, 1134, 1807, 1839
EarI	CTCTTC	4 cut(s)	552, 1134, 1807, 1839
Ecl136II	GAGCTC	1 cut(s)	157
Eco130I	CCWWGG	3 cut(s)	989, 1076, 1284
Eco24I	GRGCYC	2 cut(s)	159, 326
Eco31I	GGTCTC	1 cut(s)	1809
Eco32I	GATATC	1 cut(s)	1206
Eco53kI	GAGCTC	1 cut(s)	157
Eco57I	CTGAAG	1 cut(s)	280
Eco88I	CYCGRG	1 cut(s)	158
EcoICRI	GAGCTC	1 cut(s)	157
EcoRII	CCWGG	3 cut(s)	326, 1216, 1305
EcoRV	GATATC	1 cut(s)	1206
EcoT14I	CCWWGG	3 cut(s)	989, 1076, 1284
EcoT38I	GRGCYC	2 cut(s)	159, 326
ErhI	CCWWGG	3 cut(s)	989, 1076, 1284
FaeI	CATG	9 cut(s)	693, 847, 929, 938, 962, 1080, 1343, 1373, 1823
FalI	AAGNNNNNCTT	2 cut(s)	602, 634
FaqI	GGGAC	1 cut(s)	1274
FatI	CATG	9 cut(s)	689, 843, 925, 934, 958, 1076, 1339, 1369, 1819
FauI	CCCGC	2 cut(s)	187, 555
Fnu4HI	GCNGC	6 cut(s)	218, 248, 251, 775, 1029, 1593
FokI	GGATG	7 cut(s)	407, 500, 683, 866, 1006, 1301, 1763
FriOI	GRGCYC	2 cut(s)	159, 326
Fsp4HI	GCNGC	6 cut(s)	218, 248, 251, 775, 1029, 1593
FspBI	CTAG	4 cut(s)	134, 758, 981, 1113
GlaI	GCGC	1 cut(s)	369
GluI	GCNGC	6 cut(s)	218, 248, 251, 775, 1029, 1593
GsaI	CCCAGC	2 cut(s)	1260, 1866
GsuI	CTGGAG	2 cut(s)	332, 834
HaeIII	GGCC	3 cut(s)	15, 116, 433
HapII	CCGG	4 cut(s)	112, 290, 340, 1316
HgaI	GACGC	3 cut(s)	174, 201, 865
HhaI	GCGC	1 cut(s)	370
Hin1I	GRCGYC	2 cut(s)	140, 212
Hin1II	CATG	9 cut(s)	693, 847, 929, 938, 962, 1080, 1343, 1373, 1823
Hin6I	GCGC	1 cut(s)	368
HinP1I	GCGC	1 cut(s)	368
HindIII	AAGCTT	3 cut(s)	18, 766, 1780
HinfI	GANTC	7 cut(s)	77, 199, 647, 818, 1012, 1043, 1558
HpaII	CCGG	4 cut(s)	112, 290, 340, 1316
HphI	GGTGA	2 cut(s)	488, 1125
Hpy166II	GTNNAC	4 cut(s)	280, 1387, 1549, 1884
Hpy188I	TCNGA	8 cut(s)	265, 273, 379, 709, 1093, 1536, 1767, 1806
Hpy8I	GTNNAC	4 cut(s)	280, 1387, 1549, 1884
Hpy99I	CGWCG	6 cut(s)	89, 142, 145, 211, 217, 289
HpyAV	CCTTC	8 cut(s)	5, 49, 55, 67, 298, 423, 460, 1450
HpyCH4III	ACNGT	6 cut(s)	590, 836, 1020, 1484, 1553, 1673
HpyCH4IV	ACGT	2 cut(s)	140, 1731
HpyF10VI	GCNNNNNNNGC	8 cut(s)	191, 256, 709, 774, 1037, 1046, 1298, 1436
HpyF3I	CTNAG	5 cut(s)	708, 1269, 1527, 1642, 1896
HpySE526I	ACGT	2 cut(s)	140, 1731
Hsp92I	GRCGYC	2 cut(s)	140, 212
Hsp92II	CATG	9 cut(s)	693, 847, 929, 938, 962, 1080, 1343, 1373, 1823
HspAI	GCGC	1 cut(s)	368
Kpn2I	TCCGGA	1 cut(s)	339
Kzo9I	GATC	8 cut(s)	91, 336, 342, 721, 1093, 1825, 1933, 1937
LguI	GCTCTTC	2 cut(s)	552, 1134
LmnI	GCTCC	4 cut(s)	321, 517, 637, 1631
Lsp1109I	GCAGC	5 cut(s)	234, 262, 786, 1015, 1579
LweI	GCATC	2 cut(s)	1279, 1741
MaeI	CTAG	4 cut(s)	134, 758, 981, 1113
MaeII	ACGT	2 cut(s)	140, 1731
MaeIII	GTNAC	7 cut(s)	673, 970, 1060, 1160, 1468, 1484, 1706
MalI	GATC	8 cut(s)	93, 338, 344, 723, 1095, 1827, 1935, 1939
MbiI	CCGCTC	1 cut(s)	562
MboI	GATC	8 cut(s)	91, 336, 342, 721, 1093, 1825, 1933, 1937
MfeI	CAATTG	2 cut(s)	98, 1462
MflI	RGATCY	2 cut(s)	91, 336
MhlI	GDGCHC	4 cut(s)	159, 326, 1432, 1886
MlyI	GAGTC	4 cut(s)	71, 656, 827, 1052
MmeI	TCCRAC	5 cut(s)	57, 243, 357, 1331, 1707
MroI	TCCGGA	1 cut(s)	339
MroXI	GAANNNNTTC	3 cut(s)	167, 551, 1225
MseI	TTAA	9 cut(s)	177, 411, 507, 582, 863, 1188, 1200, 1365, 1790
MslI	CAYNNNNRTG	2 cut(s)	900, 1704
MspA1I	CMGCKG	1 cut(s)	1256
MspI	CCGG	4 cut(s)	112, 290, 340, 1316
MspR9I	CCNGG	4 cut(s)	113, 328, 1218, 1307
MunI	CAATTG	2 cut(s)	98, 1462
Mva1269I	GAATGC	3 cut(s)	370, 895, 1619
MvaI	CCWGG	3 cut(s)	328, 1218, 1307
MvnI	CGCG	2 cut(s)	153, 185
MwoI	GCNNNNNNNGC	8 cut(s)	191, 256, 709, 774, 1037, 1046, 1298, 1436
NciI	CCSGG	1 cut(s)	113
NcoI	CCATGG	1 cut(s)	1076
NdeII	GATC	8 cut(s)	91, 336, 342, 721, 1093, 1825, 1933, 1937
NlaIII	CATG	9 cut(s)	693, 847, 929, 938, 962, 1080, 1343, 1373, 1823
NlaIV	GGNNCC	4 cut(s)	323, 338, 519, 639
NmeAIII	GCCGAG	1 cut(s)	170
NmuCI	GTSAC	5 cut(s)	673, 970, 1468, 1484, 1706
NspI	RCATGY	2 cut(s)	693, 962
NspV	TTCGAA	1 cut(s)	555
OliI	CACNNNNGTG	1 cut(s)	1704
PaeR7I	CTCGAG	1 cut(s)	158
PciI	ACATGT	1 cut(s)	958
PciSI	GCTCTTC	2 cut(s)	552, 1134
PctI	GAATGC	3 cut(s)	370, 895, 1619
PdmI	GAANNNNTTC	3 cut(s)	167, 551, 1225
PfeI	GAWTC	3 cut(s)	199, 1012, 1558
PflFI	GACNNNGTC	1 cut(s)	236
PfoI	TCCNGGA	2 cut(s)	1216, 1305
PkrI	GCNGC	6 cut(s)	219, 249, 252, 776, 1030, 1594
PleI	GAGTC	4 cut(s)	71, 655, 826, 1051
PpsI	GAGTC	4 cut(s)	71, 655, 826, 1051
PscI	ACATGT	1 cut(s)	958
Psp124BI	GAGCTC	1 cut(s)	159
Psp6I	CCWGG	3 cut(s)	326, 1216, 1305
PspFI	CCCAGC	2 cut(s)	1256, 1862
PspGI	CCWGG	3 cut(s)	326, 1216, 1305
PspN4I	GGNNCC	4 cut(s)	323, 338, 519, 639
PspPI	GGNCC	1 cut(s)	114
PstI	CTGCAG	2 cut(s)	252, 1597
PstNI	CAGNNNCTG	1 cut(s)	1046
PsuI	RGATCY	2 cut(s)	91, 336
PsyI	GACNNNGTC	1 cut(s)	236
PvuII	CAGCTG	1 cut(s)	1256
RsaI	GTAC	5 cut(s)	281, 512, 660, 1771, 1844
RsaNI	GTAC	5 cut(s)	280, 511, 659, 1770, 1843
RseI	CAYNNNNRTG	2 cut(s)	900, 1704
SacI	GAGCTC	1 cut(s)	159
SapI	GCTCTTC	2 cut(s)	552, 1134
SaqAI	TTAA	9 cut(s)	177, 411, 507, 582, 863, 1188, 1200, 1365, 1790
SatI	GCNGC	6 cut(s)	218, 248, 251, 775, 1029, 1593
Sau3AI	GATC	8 cut(s)	91, 336, 342, 721, 1093, 1825, 1933, 1937
Sau96I	GGNCC	1 cut(s)	114
ScaI	AGTACT	1 cut(s)	512
SchI	GAGTC	4 cut(s)	71, 656, 827, 1052
ScrFI	CCNGG	4 cut(s)	113, 328, 1218, 1307
SduI	GDGCHC	4 cut(s)	159, 326, 1432, 1886
SfaNI	GCATC	2 cut(s)	1279, 1741
SfcI	CTRYAG	2 cut(s)	248, 1593
Sfr274I	CTCGAG	1 cut(s)	158
SfuI	TTCGAA	1 cut(s)	555
SlaI	CTCGAG	1 cut(s)	158
SmiI	ATTTAAAT	1 cut(s)	1791
SmiMI	CAYNNNNRTG	2 cut(s)	900, 1704
SmlI	CTYRAG	3 cut(s)	158, 1169, 1570
SmoI	CTYRAG	3 cut(s)	158, 1169, 1570
SpeI	ACTAGT	1 cut(s)	757
SsiI	CCGC	7 cut(s)	151, 183, 194, 218, 562, 1193, 1931
SspMI	CTAG	4 cut(s)	134, 758, 981, 1113
SstI	GAGCTC	1 cut(s)	159
StyD4I	CCNGG	4 cut(s)	111, 326, 1216, 1305
StyI	CCWWGG	3 cut(s)	989, 1076, 1284
SwaI	ATTTAAAT	1 cut(s)	1791
TaaI	ACNGT	6 cut(s)	590, 836, 1020, 1484, 1553, 1673
TaiI	ACGT	2 cut(s)	143, 1734
TaqI	TCGA	8 cut(s)	23, 53, 147, 159, 332, 555, 720, 1936
TaqII	GACCGA	1 cut(s)	192
TatI	WGTACW	2 cut(s)	279, 510
TauI	GCSGC	1 cut(s)	220
TfiI	GAWTC	3 cut(s)	199, 1012, 1558
Tru1I	TTAA	9 cut(s)	177, 411, 507, 582, 863, 1188, 1200, 1365, 1790
Tru9I	TTAA	9 cut(s)	177, 411, 507, 582, 863, 1188, 1200, 1365, 1790
TscAI	CASTG	5 cut(s)	451, 595, 841, 1014, 1023
TseFI	GTSAC	5 cut(s)	673, 970, 1468, 1484, 1706
TseI	GCWGC	5 cut(s)	247, 250, 774, 1028, 1592
Tsp45I	GTSAC	5 cut(s)	673, 970, 1468, 1484, 1706
TspDTI	ATGAA	6 cut(s)	37, 119, 860, 867, 1773, 1843
TspGWI	ACGGA	1 cut(s)	1148
TspRI	CASTG	5 cut(s)	451, 595, 841, 1014, 1023
Tth111I	GACNNNGTC	1 cut(s)	236
VneI	GTGCAC	1 cut(s)	1882
XapI	RAATTY	7 cut(s)	266, 407, 566, 605, 1149, 1361, 1916
XceI	RCATGY	2 cut(s)	693, 962
XhoI	CTCGAG	1 cut(s)	158
XmnI	GAANNNNTTC	3 cut(s)	167, 551, 1225
XspI	CTAG	4 cut(s)	134, 758, 981, 1113
ZraI	GACGTC	1 cut(s)	141
ZrmI	AGTACT	1 cut(s)	512

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.