Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0007806

Physical Location & Seq

Genomic Coordinates Forward (+)

20532520 .. 20538353

Gene Structure 5834 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G018460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2364 bp

ATGGCCGGAGAAGGACAAGCGTCGACGTCGAACGCGTTCTCGTTCATATCGAAGGGGTGGAGGGAAGTGAAGGACTCGGCGGACGCGGATCTCCAATTGATGAAGGACCGAGCCAACTCGTTCAAGAACTTGGCGACTTCCTTCGACCGCGAGCTCGAGAACTTGTTCAACTCGGCGACCGCAATCCGGTCGTCTTCGTCGCTGTCGCGGCCGACGGAGATCGACTTCGTGAAGAAGCTGCAGCCGAAGCTGGTGGAGATTCGGAGGGCGTACTCGTCGCCGGATTTCAGCAAGAAGGTGCTGGAGAAATGGACCCCGAGATCGACGATTCGGATTGATTTGTCGGCGATAAAGAATGCTATAGTGTCGGAGGTGGAGAGCAGGGAAGGGATGGCGGAGTTTGATAGGATTAGGCGGAGGAGGAGTTTGAAGTTTAGTGAGTTTTGGGGAGAGTGGAAGAGAGACGGTGATGATGAGGAGAAACAGTCCAGTAGGGATTGGGAGCCAATTCGAGTGTTGAAGACGAGATTGAAAGAGTTTGAGAAGCGTGAATTTCTCGGTGGGTTTAAGAACAGTGAGTTTGTGGAGAAGGTCAAGTCCAGCTTGAAATCAGTTTACAAGGATTCTCAGGAGTCACAGGCTGTACCTCCACTGGATGCGGCGGAACTTTTGGCAAGTTTGGTTAGGCAATCTGAGCCATTTCTGGATCAACTTGGCATTAGAAAAGATGTATGTGAGAAATTAGTGGAAAGCTTGTATAGTAAACGCAAGAATTACTTTCTGTTGAACTCCCCTTCTTCCGGAGAGTCATCTGTTCTAGAGGGTGAAAACATTAATGATGAATTAGATTTAAGGATAGCTTCTGTCCTGCAAAGTACAGGGCATTCTTACGATGGTGGATTTTGGACAGACCATGCAAAGCATGACCCATCAGACCAGAAACGGCATGTTGCTATAGTCACAACTGCTAGTCTTCCTTGGATGACAGGAACAGCAGTGAATCCACTTTTTCGAGCTGCGTATCTGGCTCAGACTGCAAAACAAAATGTTACCTTGTTAGTTCCATGGCTTTGCGCATCAGATCAAGAACTTGTGTATCCTAGCAATATCACTTTTACTTCACCAGAAGAGCAGGAAATTTATATCCGTAACTGGCTTGAGGAAAGGATTGGCTTTAAAGCTGACTTTAAGATCTCCTTTTATCCAGGGAAGTTTTCCAAAGAAAGGCGAAGCATTTTACCTGCTGGAGACACTTCTCAGTTCATTCCGTCCAAAGAGGCTGACATTGCTATCCTGGAAGAACCAGAACACCTGAATTGGTACCATCATGGCAGGCGATGGACTGATAAGTTTAACCATGTTGTTGGTGTTGTTCATACAAATTACTTGGAATATATCAAGAGAGAGAAGAATGGAGCTCTTCAAGCATTCTTTGTGAAGCACATAAACAATTGGGTTACAAGAGCATATTGCGACAAGGTTCTTCGCCTTTCAGCTGCCACACAGGATTTACCTAAGTCTGTGATCTGCAATGTTCATGGCGTGAATCCTAAGTTCTTAAAAATTGGAGAGAAGGTGGCTGCAGAAAAGGAAACTGGAGAGAAAACATTCTCAAAAGGAGCATATTTCTTGGGAAAGATGGTCTGGGCGAAGGGATACCGCGAATTGATAGATTTGTTGGCAAAGCACAAGAGTGACCTTGATGGCTTCAAAGTGGATGTGTATGGGAATGGAGAGGATGCCAATGAAGTCCAGAGTACAGCTAAGAGTTTGGATTTGAATCTGAACTTTCTAAAAGGGAGGGACCATGCTGATGATTCTCTTCACGGGTACAAAGTCTTCATAAATCCCAGTGTTAGTGATGTGCTGTGCACGGCTACTGCTGAGGCGCTTGCCATGGGAAAATTTGTTGTTTGTGCGTACCATCCATCAAATCAGTTTTTCAGATCATTTCCTAATTGCTTGACTTATGAAACATCTGAGGACTTTGTTGCCAAAGTAAAGGAAGCAATGGAAAATGACCCTCAGCCCCTTACTCCAGAGCAAAGATTTAATCTTTCATGGGAAGCAGCTACACAGAGATTCATGGAGTATTCTGAGATGGATAAAGTCTTGGATATGGAAAAGAATGGTGCAAGATCAAGCAGAGGTAAGGGAAAGGGGGTCTCAAAGTCTGCATCTATGCCTAGCTTATCAGGTATGGTTGATGGAGGATTGGCATTTGCCCATTATTGTCTCACCGGGAATGAATTCCTTAGATTATGCACTGGGGCAACCCCTGGAACCCGTGACTACGACAAGCAACATTGTAAAGATCTCCGTCTCTTGCCTCCTCAGGTTGAAAACCCTATTTATGGCTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0006643 GO:0006664 GO:0006725 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008194 GO:0008378 GO:0008610 GO:0009058 GO:0009247 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009698 GO:0009699 GO:0009707 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009808 GO:0009809 GO:0009867 GO:0009941 GO:0009987 GO:0010033 GO:0010109 GO:0016020 GO:0016053 GO:0016740 GO:0016757 GO:0016758 GO:0019222 GO:0019374 GO:0019375 GO:0019438 GO:0019748 GO:0019752 GO:0019867 GO:0023052 GO:0031090 GO:0031323 GO:0031407 GO:0031408 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032787 GO:0032870 GO:0035250 GO:0042170 GO:0042221 GO:0042548 GO:0042550 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043467 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046394 GO:0046467 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0072330 GO:0098588 GO:0098805 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576 GO:1901700 GO:1901701 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko01100 map00561 map01100

Pfam Domains

Protein Families

Glyco_trans_1_4 Glycos_transf_1

Protein Analysis

787

Amino Acids

89.22

Weight (kDa)

7.01

Isoelectric Point (pI)

41.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glycos_transf_1	PF00534	535 - 675	2.5e-10	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	542 - 672	3.2e-09	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007806)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11670 AT3G11670
fragaria_vesca	FvH4_6g20320
malus_domestica	MD12G1040400.v1.1 MD14G1039100.v1.1
prunus_persica	Prupe.7G094500_v2.0.a1
pyrus_communis	pycom12g03450 pycom14g03360
rosa_chinensis	RchiOBHm_Chr3g0475941
rosa_laevigata	RLG00000023798
rosa_multiflora	Rmu_sc0000441.1_g000087 Rmu_sc0000596.1_g000001 Rmu_sc0001809.1_g000063
rosa_roxburghii	Rroxscaffold_6G00405710
rosa_rugosa	Rorug03G0152000 Rorug03G0152100 Rorug03G0152100 Rorug03G0152200
rosa_samantha	Rh2BG524200 Rh3AG203000 Rh3BG232800 Rh3CG228300 Rh3DG228500
rosa_wichuraiana	Rw3G018460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	29
Acc16I	TGCGCA	1 cut(s)	1075
Acc36I	ACCTGC	1 cut(s)	1249
Acc65I	GGTACC	1 cut(s)	1320
AccB1I	GGYRCC	1 cut(s)	1320
AccI	GTMKAC	1 cut(s)	23
AccII	CGCG	5 cut(s)	35, 86, 150, 208, 1662
AccIII	TCCGGA	1 cut(s)	800
AclWI	GGATC	2 cut(s)	96, 714
AcoI	YGGCCR	2 cut(s)	3, 209
AcsI	RAATTY	4 cut(s)	551, 1137, 1904, 2249
AcyI	GRCGYC	1 cut(s)	26
AfaI	GTAC	7 cut(s)	272, 645, 877, 1322, 1759, 1832, 1922
AfiI	CCNNNNNNNGG	4 cut(s)	186, 800, 1224, 2354
AflIII	ACRYGT	1 cut(s)	33
AjnI	CCWGG	3 cut(s)	1204, 1293, 2278
AleI	CACNNNNGTG	1 cut(s)	1692
Alw21I	GWGCWC	3 cut(s)	156, 1420, 1874
Alw26I	GTCTC	5 cut(s)	456, 1242, 2170, 2240, 2327
Alw44I	GTGCAC	1 cut(s)	1870
AlwI	GGATC	2 cut(s)	96, 714
Ama87I	CYCGRG	2 cut(s)	155, 316
Aor13HI	TCCGGA	1 cut(s)	800
AoxI	GGCC	2 cut(s)	3, 209
ApaLI	GTGCAC	1 cut(s)	1870
ApeKI	GCWGC	6 cut(s)	238, 241, 1016, 1496, 1580, 2069
ApoI	RAATTY	4 cut(s)	551, 1137, 1904, 2249
AseI	ATTAAT	1 cut(s)	834
Asp700I	GAANNNNTTC	4 cut(s)	35, 164, 1607, 2249
Asp718I	GGTACC	1 cut(s)	1320
AspLEI	GCGC	2 cut(s)	1076, 1891
AspS9I	GGNCC	3 cut(s)	106, 312, 1804
AsuC2I	CCSGG	1 cut(s)	2242
AsuHPI	GGTGA	4 cut(s)	479, 836, 1113, 2230
AvaI	CYCGRG	2 cut(s)	155, 316
AvaII	GGWCC	3 cut(s)	106, 312, 1804
AxyI	CCTNAGG	1 cut(s)	2334
BaeGI	GKGCMC	1 cut(s)	1874
BaeI	ACNNNNGTAYC	2 cut(s)	1079, 1112
BanI	GGYRCC	1 cut(s)	1320
BanII	GRGCYC	2 cut(s)	156, 1420
BarI	GAAGNNNNNNTAC	2 cut(s)	1823, 1855
BbsI	GAAGAC	4 cut(s)	186, 527, 965, 1831
Bbv12I	GWGCWC	3 cut(s)	156, 1420, 1874
BbvCI	CCTCAGC	2 cut(s)	1884, 2025
BbvI	GCAGC	6 cut(s)	225, 253, 1003, 1483, 1567, 2081
BceAI	ACGGC	2 cut(s)	959, 1890
BcgI	CGANNNNNNTGC	2 cut(s)	171, 205
BciT130I	CCWGG	3 cut(s)	1206, 1295, 2280
BciVI	GTATCC	2 cut(s)	1107, 1649
BcnI	CCSGG	1 cut(s)	2242
BcoDI	GTCTC	5 cut(s)	456, 1242, 2170, 2240, 2327
BfaI	CTAG	4 cut(s)	818, 969, 1101, 2187
BfmI	CTRYAG	4 cut(s)	239, 360, 954, 1581
BfoI	RGCGCY	1 cut(s)	1892
BfuAI	ACCTGC	1 cut(s)	1249
BfuI	GTATCC	2 cut(s)	1107, 1649
BglII	AGATCT	2 cut(s)	1191, 2314
BisI	GCNGC	8 cut(s)	209, 239, 242, 660, 1017, 1497, 1581, 2070
BlsI	GCNGC	8 cut(s)	210, 240, 243, 661, 1018, 1498, 1582, 2071
Bme1390I	CCNGG	4 cut(s)	1206, 1295, 2242, 2280
Bme18I	GGWCC	3 cut(s)	106, 312, 1804
BmeT110I	CYCGRG	2 cut(s)	155, 316
BmgT120I	GGNCC	3 cut(s)	106, 312, 1804
BmiI	GGNNCC	5 cut(s)	314, 504, 1322, 1805, 2284
BmrFI	CCNGG	4 cut(s)	1206, 1295, 2242, 2280
BmrI	ACTGGG	2 cut(s)	1845, 2277
BmsI	GCATC	4 cut(s)	646, 1085, 1729, 2186
BmuI	ACTGGG	2 cut(s)	1845, 2277
BoxI	GACNNNNGTC	1 cut(s)	19
BpiI	GAAGAC	4 cut(s)	186, 527, 965, 1831
BpmI	CTGGAG	4 cut(s)	323, 1266, 1617, 2022
Bpu10I	CCTNAGC	2 cut(s)	1884, 2025
BpuEI	CTTGAG	1 cut(s)	1178
BpuMI	CCSGG	1 cut(s)	2242
BsaBI	GATNNNNATC	1 cut(s)	1779
BsaHI	GRCGYC	1 cut(s)	26
BsaI	GGTCTC	1 cut(s)	2170
BsaJI	CCNNGG	5 cut(s)	977, 1064, 1205, 1896, 2278
BsaWI	WCCGGW	2 cut(s)	186, 800
BsaXI	ACNNNNNCTCC	6 cut(s)	409, 439, 470, 500, 1560, 1590
Bsc4I	CCNNNNNNNGG	4 cut(s)	186, 800, 1224, 2354
Bse1I	ACTGG	6 cut(s)	489, 657, 1157, 1600, 1851, 2272
Bse21I	CCTNAGG	1 cut(s)	2334
Bse3DI	GCAATG	3 cut(s)	1284, 1537, 2016
Bse8I	GATNNNNATC	1 cut(s)	1779
BseAI	TCCGGA	1 cut(s)	800
BseBI	CCWGG	3 cut(s)	1206, 1295, 2280
BseDI	CCNNGG	5 cut(s)	977, 1064, 1205, 1896, 2278
BseGI	GGATG	6 cut(s)	396, 661, 987, 1723, 1744, 1924
BseJI	GATNNNNATC	1 cut(s)	1779
BseLI	CCNNNNNNNGG	4 cut(s)	186, 800, 1224, 2354
BseMI	GCAATG	3 cut(s)	1284, 1537, 2016
BseMII	CTCAG	9 cut(s)	641, 684, 1043, 1271, 1875, 1971, 2039, 2088, 2348
BseNI	ACTGG	6 cut(s)	489, 657, 1157, 1600, 1851, 2272
BseRI	GAGGAG	4 cut(s)	433, 436, 491, 2322
BseSI	GKGCMC	1 cut(s)	1874
BseX3I	CGGCCG	1 cut(s)	209
BseXI	GCAGC	6 cut(s)	225, 253, 1003, 1483, 1567, 2081
Bsh1236I	CGCG	5 cut(s)	35, 86, 150, 208, 1662
Bsh1285I	CGRYCG	4 cut(s)	148, 180, 191, 212
BshFI	GGCC	2 cut(s)	5, 211
BshNI	GGYRCC	1 cut(s)	1320
BsiEI	CGRYCG	4 cut(s)	148, 180, 191, 212
BsiHKAI	GWGCWC	3 cut(s)	156, 1420, 1874
BsiHKCI	CYCGRG	2 cut(s)	155, 316
BsiSI	CCGG	5 cut(s)	6, 187, 281, 801, 2241
BslFI	GGGAC	1 cut(s)	1817
BslI	CCNNNNNNNGG	4 cut(s)	186, 800, 1224, 2354
BsmAI	GTCTC	5 cut(s)	456, 1242, 2170, 2240, 2327
BsmBI	CGTCTC	2 cut(s)	456, 2327
BsmFI	GGGAC	1 cut(s)	1817
BsmI	GAATGC	3 cut(s)	361, 883, 1427
BsnI	GGCC	2 cut(s)	5, 211
Bso31I	GGTCTC	1 cut(s)	2170
BsoBI	CYCGRG	2 cut(s)	155, 316
Bsp1286I	GDGCHC	3 cut(s)	156, 1420, 1874
Bsp13I	TCCGGA	1 cut(s)	800
Bsp19I	CCATGG	2 cut(s)	1064, 1896
BspANI	GGCC	2 cut(s)	5, 211
BspCNI	CTCAG	9 cut(s)	640, 685, 1042, 1270, 1876, 1972, 2038, 2089, 2347
BspEI	TCCGGA	1 cut(s)	800
BspFNI	CGCG	5 cut(s)	35, 86, 150, 208, 1662
BspLI	GGNNCC	5 cut(s)	314, 504, 1322, 1805, 2284
BspMAI	CTGCAG	2 cut(s)	243, 1585
BspMI	ACCTGC	1 cut(s)	1249
BspPI	GGATC	2 cut(s)	96, 714
BspQI	GCTCTTC	2 cut(s)	1122, 1425
BspT107I	GGYRCC	1 cut(s)	1320
BspTNI	GGTCTC	1 cut(s)	2170
BsrDI	GCAATG	3 cut(s)	1284, 1537, 2016
BsrI	ACTGG	6 cut(s)	489, 657, 1157, 1600, 1851, 2272
BssECI	CCNNGG	5 cut(s)	977, 1064, 1205, 1896, 2278
BssNI	GRCGYC	1 cut(s)	26
BssT1I	CCWWGG	3 cut(s)	977, 1064, 1896
Bst2UI	CCWGG	3 cut(s)	1206, 1295, 2280
Bst4CI	ACNGT	3 cut(s)	467, 486, 575
Bst6I	CTCTTC	4 cut(s)	452, 1122, 1425, 1827
BstACI	GRCGYC	1 cut(s)	26
BstC8I	GCNNGC	3 cut(s)	152, 1334, 1893
BstDSI	CCRYGG	2 cut(s)	1064, 1896
BstF5I	GGATG	6 cut(s)	396, 661, 987, 1723, 1744, 1924
BstFNI	CGCG	5 cut(s)	35, 86, 150, 208, 1662
BstH2I	RGCGCY	1 cut(s)	1892
BstHHI	GCGC	2 cut(s)	1076, 1891
BstMAI	GTCTC	5 cut(s)	456, 1242, 2170, 2240, 2327
BstMCI	CGRYCG	4 cut(s)	148, 180, 191, 212
BstMWI	GCNNNNNNNGC	7 cut(s)	208, 247, 694, 1025, 1034, 1286, 1424
BstNI	CCWGG	3 cut(s)	1206, 1295, 2280
BstNSI	RCATGY	1 cut(s)	950
BstPAI	GACNNNNGTC	1 cut(s)	19
BstSCI	CCNGG	4 cut(s)	1204, 1293, 2240, 2278
BstSFI	CTRYAG	4 cut(s)	239, 360, 954, 1581
BstSLI	GKGCMC	1 cut(s)	1874
BstUI	CGCG	5 cut(s)	35, 86, 150, 208, 1662
BstV1I	GCAGC	6 cut(s)	225, 253, 1003, 1483, 1567, 2081
BstV2I	GAAGAC	4 cut(s)	186, 527, 965, 1831
BstX2I	RGATCY	3 cut(s)	88, 1191, 2314
BstXI	CCANNNNNNTGG	1 cut(s)	1364
BstYI	RGATCY	3 cut(s)	88, 1191, 2314
BstZI	CGGCCG	1 cut(s)	209
Bsu36I	CCTNAGG	1 cut(s)	2334
BsuI	GTATCC	2 cut(s)	1107, 1649
BsuRI	GGCC	2 cut(s)	5, 211
BtgI	CCRYGG	2 cut(s)	1064, 1896
BtgZI	GCGATG	1 cut(s)	1351
BtsCI	GGATG	6 cut(s)	396, 661, 987, 1723, 1744, 1924
BtsI	GCAGTG	1 cut(s)	1002
BtsIMutI	CAGTG	5 cut(s)	580, 650, 1002, 1858, 2265
BveI	ACCTGC	1 cut(s)	1249
Cac8I	GCNNGC	3 cut(s)	152, 1334, 1893
CfoI	GCGC	2 cut(s)	1076, 1891
Cfr13I	GGNCC	3 cut(s)	106, 312, 1804
CseI	GACGC	2 cut(s)	9, 92
Csp6I	GTAC	7 cut(s)	271, 644, 876, 1321, 1758, 1831, 1921
CviQI	GTAC	7 cut(s)	271, 644, 876, 1321, 1758, 1831, 1921
DraI	TTTAAA	1 cut(s)	1177
EaeI	YGGCCR	2 cut(s)	3, 209
EagI	CGGCCG	1 cut(s)	209
Eam1104I	CTCTTC	4 cut(s)	452, 1122, 1425, 1827
EarI	CTCTTC	4 cut(s)	452, 1122, 1425, 1827
EciI	GGCGGA	4 cut(s)	95, 410, 430, 677
Ecl136II	GAGCTC	2 cut(s)	154, 1418
EclXI	CGGCCG	1 cut(s)	209
Eco130I	CCWWGG	3 cut(s)	977, 1064, 1896
Eco24I	GRGCYC	2 cut(s)	156, 1420
Eco31I	GGTCTC	1 cut(s)	2170
Eco47I	GGWCC	3 cut(s)	106, 312, 1804
Eco52I	CGGCCG	1 cut(s)	209
Eco53kI	GAGCTC	2 cut(s)	154, 1418
Eco81I	CCTNAGG	1 cut(s)	2334
Eco88I	CYCGRG	2 cut(s)	155, 316
EcoICRI	GAGCTC	2 cut(s)	154, 1418
EcoRI	GAATTC	1 cut(s)	2249
EcoRII	CCWGG	3 cut(s)	1204, 1293, 2278
EcoT14I	CCWWGG	3 cut(s)	977, 1064, 1896
EcoT38I	GRGCYC	2 cut(s)	156, 1420
ErhI	CCWWGG	3 cut(s)	977, 1064, 1896
Esp3I	CGTCTC	2 cut(s)	456, 2327
FalI	AAGNNNNNCTT	8 cut(s)	587, 619, 761, 793, 844, 876, 1181, 1213
FaqI	GGGAC	1 cut(s)	1817
FblI	GTMKAC	1 cut(s)	23
Fnu4HI	GCNGC	8 cut(s)	209, 239, 242, 660, 1017, 1497, 1581, 2070
FokI	GGATG	6 cut(s)	403, 668, 994, 1730, 1751, 1911
FriOI	GRGCYC	2 cut(s)	156, 1420
Fsp4HI	GCNGC	8 cut(s)	209, 239, 242, 660, 1017, 1497, 1581, 2070
FspBI	CTAG	4 cut(s)	818, 969, 1101, 2187
FspI	TGCGCA	1 cut(s)	1075
GlaI	GCGC	2 cut(s)	1075, 1890
GluI	GCNGC	8 cut(s)	209, 239, 242, 660, 1017, 1497, 1581, 2070
GsuI	CTGGAG	4 cut(s)	323, 1266, 1617, 2022
HaeII	RGCGCY	1 cut(s)	1892
HaeIII	GGCC	2 cut(s)	5, 211
HapII	CCGG	5 cut(s)	6, 187, 281, 801, 2241
HgaI	GACGC	2 cut(s)	9, 92
HhaI	GCGC	2 cut(s)	1076, 1891
Hin1I	GRCGYC	1 cut(s)	26
Hin6I	GCGC	2 cut(s)	1074, 1889
HinP1I	GCGC	2 cut(s)	1074, 1889
HincII	GTYRAC	1 cut(s)	24
HindII	GTYRAC	1 cut(s)	24
HindIII	AAGCTT	1 cut(s)	751
HpaII	CCGG	5 cut(s)	6, 187, 281, 801, 2241
HphI	GGTGA	4 cut(s)	479, 836, 1113, 2230
Hpy166II	GTNNAC	4 cut(s)	24, 616, 764, 1872
Hpy8I	GTNNAC	4 cut(s)	24, 616, 764, 1872
Hpy99I	CGWCG	7 cut(s)	25, 28, 31, 202, 217, 280, 328
HpyCH4III	ACNGT	3 cut(s)	467, 486, 575
HpyCH4IV	ACGT	1 cut(s)	26
HpyF10VI	GCNNNNNNNGC	7 cut(s)	208, 247, 694, 1025, 1034, 1286, 1424
HpySE526I	ACGT	1 cut(s)	26
Hsp92I	GRCGYC	1 cut(s)	26
HspAI	GCGC	2 cut(s)	1074, 1889
Kpn2I	TCCGGA	1 cut(s)	800
KpnI	GGTACC	1 cut(s)	1324
LguI	GCTCTTC	2 cut(s)	1122, 1425
LmnI	GCTCC	3 cut(s)	502, 1415, 1619
Lsp1109I	GCAGC	6 cut(s)	225, 253, 1003, 1483, 1567, 2081
LweI	GCATC	4 cut(s)	646, 1085, 1729, 2186
MaeI	CTAG	4 cut(s)	818, 969, 1101, 2187
MaeII	ACGT	1 cut(s)	26
MaeIII	GTNAC	7 cut(s)	633, 958, 1048, 1148, 1456, 1694, 2288
MfeI	CAATTG	2 cut(s)	95, 1450
MflI	RGATCY	3 cut(s)	88, 1191, 2314
MhlI	GDGCHC	3 cut(s)	156, 1420, 1874
MluI	ACGCGT	1 cut(s)	33
MlyI	GAGTC	3 cut(s)	68, 641, 815
MmeI	TCCRAC	1 cut(s)	348
MroI	TCCGGA	1 cut(s)	800
MroXI	GAANNNNTTC	4 cut(s)	35, 164, 1607, 2249
MseI	TTAA	8 cut(s)	567, 834, 851, 1176, 1188, 1353, 1559, 2052
MslI	CAYNNNNRTG	2 cut(s)	1692, 1812
MspA1I	CMGCKG	1 cut(s)	1496
MspI	CCGG	5 cut(s)	6, 187, 281, 801, 2241
MspR9I	CCNGG	4 cut(s)	1206, 1295, 2242, 2280
MunI	CAATTG	2 cut(s)	95, 1450
Mva1269I	GAATGC	3 cut(s)	361, 883, 1427
MvaI	CCWGG	3 cut(s)	1206, 1295, 2280
MvnI	CGCG	5 cut(s)	35, 86, 150, 208, 1662
MwoI	GCNNNNNNNGC	7 cut(s)	208, 247, 694, 1025, 1034, 1286, 1424
NciI	CCSGG	1 cut(s)	2242
NcoI	CCATGG	2 cut(s)	1064, 1896
NlaIV	GGNNCC	5 cut(s)	314, 504, 1322, 1805, 2284
NmeAIII	GCCGAG	2 cut(s)	56, 152
NmuCI	GTSAC	4 cut(s)	633, 958, 1694, 2288
NsbI	TGCGCA	1 cut(s)	1075
NspI	RCATGY	1 cut(s)	950
OliI	CACNNNNGTG	1 cut(s)	1692
PaeR7I	CTCGAG	1 cut(s)	155
PciSI	GCTCTTC	2 cut(s)	1122, 1425
PcsI	WCGNNNNNNNCGW	2 cut(s)	32, 47
PctI	GAATGC	3 cut(s)	361, 883, 1427
PdmI	GAANNNNTTC	4 cut(s)	35, 164, 1607, 2249
PfeI	GAWTC	8 cut(s)	259, 328, 623, 1000, 1546, 1780, 1817, 2082
PfoI	TCCNGGA	1 cut(s)	1293
PkrI	GCNGC	8 cut(s)	210, 240, 243, 661, 1018, 1498, 1582, 2071
PleI	GAGTC	3 cut(s)	68, 640, 814
PpsI	GAGTC	3 cut(s)	68, 640, 814
PshAI	GACNNNNGTC	1 cut(s)	19
PshBI	ATTAAT	1 cut(s)	834
Psp124BI	GAGCTC	2 cut(s)	156, 1420
Psp6I	CCWGG	3 cut(s)	1204, 1293, 2278
PspGI	CCWGG	3 cut(s)	1204, 1293, 2278
PspN4I	GGNNCC	5 cut(s)	314, 504, 1322, 1805, 2284
PspPI	GGNCC	3 cut(s)	106, 312, 1804
PstI	CTGCAG	2 cut(s)	243, 1585
PsuI	RGATCY	3 cut(s)	88, 1191, 2314
PvuII	CAGCTG	1 cut(s)	1496
RsaI	GTAC	7 cut(s)	272, 645, 877, 1322, 1759, 1832, 1922
RsaNI	GTAC	7 cut(s)	271, 644, 876, 1321, 1758, 1831, 1921
RseI	CAYNNNNRTG	2 cut(s)	1692, 1812
SacI	GAGCTC	2 cut(s)	156, 1420
SalI	GTCGAC	1 cut(s)	22
SapI	GCTCTTC	2 cut(s)	1122, 1425
SaqAI	TTAA	8 cut(s)	567, 834, 851, 1176, 1188, 1353, 1559, 2052
SatI	GCNGC	8 cut(s)	209, 239, 242, 660, 1017, 1497, 1581, 2070
Sau96I	GGNCC	3 cut(s)	106, 312, 1804
SchI	GAGTC	3 cut(s)	68, 641, 815
ScrFI	CCNGG	4 cut(s)	1206, 1295, 2242, 2280
SduI	GDGCHC	3 cut(s)	156, 1420, 1874
SfaNI	GCATC	4 cut(s)	646, 1085, 1729, 2186
SfcI	CTRYAG	4 cut(s)	239, 360, 954, 1581
Sfr274I	CTCGAG	1 cut(s)	155
SgrDI	CGTCGACG	1 cut(s)	22
SinI	GGWCC	3 cut(s)	106, 312, 1804
SlaI	CTCGAG	1 cut(s)	155
SmiMI	CAYNNNNRTG	2 cut(s)	1692, 1812
SmlI	CTYRAG	2 cut(s)	155, 1157
SmoI	CTYRAG	2 cut(s)	155, 1157
SspMI	CTAG	4 cut(s)	818, 969, 1101, 2187
SstI	GAGCTC	2 cut(s)	156, 1420
StyD4I	CCNGG	4 cut(s)	1204, 1293, 2240, 2278
StyI	CCWWGG	3 cut(s)	977, 1064, 1896
TaaI	ACNGT	3 cut(s)	467, 486, 575
TaiI	ACGT	1 cut(s)	29
TaqI	TCGA	9 cut(s)	23, 29, 50, 144, 156, 222, 323, 511, 1012
TaqII	GACCGA	1 cut(s)	123
TatI	WGTACW	2 cut(s)	875, 1757
TauI	GCSGC	2 cut(s)	211, 662
TfiI	GAWTC	8 cut(s)	259, 328, 623, 1000, 1546, 1780, 1817, 2082
Tru1I	TTAA	8 cut(s)	567, 834, 851, 1176, 1188, 1353, 1559, 2052
Tru9I	TTAA	8 cut(s)	567, 834, 851, 1176, 1188, 1353, 1559, 2052
TscAI	CASTG	5 cut(s)	580, 657, 1002, 1858, 2272
TseFI	GTSAC	4 cut(s)	633, 958, 1694, 2288
TseI	GCWGC	6 cut(s)	238, 241, 1016, 1496, 1580, 2069
Tsp45I	GTSAC	4 cut(s)	633, 958, 1694, 2288
TspGWI	ACGGA	4 cut(s)	230, 1136, 1257, 2309
TspRI	CASTG	5 cut(s)	580, 657, 1002, 1858, 2272
VneI	GTGCAC	1 cut(s)	1870
VpaK11BI	GGWCC	3 cut(s)	106, 312, 1804
VspI	ATTAAT	1 cut(s)	834
XapI	RAATTY	4 cut(s)	551, 1137, 1904, 2249
XbaI	TCTAGA	1 cut(s)	817
XceI	RCATGY	1 cut(s)	950
XhoI	CTCGAG	1 cut(s)	155
XmiI	GTMKAC	1 cut(s)	23
XmnI	GAANNNNTTC	4 cut(s)	35, 164, 1607, 2249
XspI	CTAG	4 cut(s)	818, 969, 1101, 2187
ZraI	GACGTC	1 cut(s)	27

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.