Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0007357

Physical Location & Seq

Genomic Coordinates Forward (+)

8695702 .. 8698681

Gene Structure 2980 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1076800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 648 bp

ATGTCGAAGGCGATGGGTCTGGCGCGGCAGGGTTGCAAAGCTCTCAAACAATGCAACTTGCTCAGGGCTTTGCAGTCCGAGATACAATACGAGCTTTCCTCTAATCCCTTTCAGGAAAGAGGAAGCTCTTCGTTGGGTGATTTTGTGGTGGAGTGGGATTCACCACGGTCCCAAGATGTGGTTTTGAGGAGGAAATTTGAGAGCGGTGAGGAGGTTGCTGTTTCTGCTTTGTTGGGTCCCTTTTACTCTGAGGAAGACTCTGTTGAAAAATACAGCGAGTATCCAGGGGAAGCTTTGATGAAGGTATGTGTGAAGAAGCCTGGTTTGAGCTCAATGCTGCAGTTCGATTGCAGTGTTTTTGAGATTATCGGTTCTGGGTCCGTATTCAACATCCATAATGCCCATATTCTTCAACCATCAGCTGGTCTTGGCCCTTCTGTCTACAGAGGCCCCGCATTCAGTTCTTTGGATGATCAGTTACAAGATGCCCTCAAGGAATATCTACAATCCAAAGGCATTGGAGAAAGCCTGACTAACTTCCTCCTCCACCACCTGCACAAAAAAGAGCACGGTCAATACGTGAACTGGCTGCACATACTTGAATCTCATGTTGCGAAACCAAAACCAGAGAGTGACAGAATCCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006091 GO:0006417 GO:0008150 GO:0008152 GO:0008494 GO:0009060 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0015980 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0032268 GO:0032270 GO:0034248 GO:0034250 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045182 GO:0045333 GO:0045727 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0055114 GO:0060255 GO:0065007 GO:0070013 GO:0070129 GO:0070131 GO:0080090 GO:0090079 GO:0097159 GO:1901363 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko05168 map05168

Pfam Domains

Protein Families

MAM33

Protein Analysis

216

Amino Acids

23.96

Weight (kDa)

5.91

Isoelectric Point (pI)

62.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MAM33	PF02330	24 - 203	2.8e-21	Mitochondrial glycoprotein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

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Publication-ready

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Orthologous Genes (Group: OG0007357)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41600 AT2G41600 AT2G41600 AT2G41600 AT2G41600 AT2G41600 AT2G41600
fragaria_vesca	FvH4_6g24410
malus_domestica	MD14G1076800.v1.1 MD14G1125800.v1.1
prunus_persica	Prupe.7G054700_v2.0.a1 Prupe.7G054700_v2.0.a1
pyrus_communis	pycom14g06510
rosa_chinensis	RchiOBHm_Chr3g0483391
rosa_laevigata	RLG00000023287
rosa_multiflora	Rmu_sc0006349.1_g000008 Rmu_sc0009753.1_g000002
rosa_roxburghii	Rroxscaffold_6G00398390
rosa_rugosa	Rorug03G0205700
rosa_samantha	Rh3AG254100 Rh3BG291200 Rh3CG288400 Rh3DG284200
rosa_wichuraiana	Rw0G023720 Rw0G023750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	561
Acc36I	ACCTGC	1 cut(s)	561
AccB7I	CCANNNNNTGG	2 cut(s)	178, 422
AccBSI	CCGCTC	1 cut(s)	204
AccI	GTMKAC	1 cut(s)	441
AccII	CGCG	1 cut(s)	25
AciI	CCGC	3 cut(s)	25, 204, 453
AcsI	RAATTY	1 cut(s)	194
AfiI	CCNNNNNNNGG	2 cut(s)	178, 422
AgsI	TTSAA	4 cut(s)	266, 388, 413, 602
AjnI	CCWGG	2 cut(s)	283, 319
AluBI	AGCT	6 cut(s)	41, 94, 126, 293, 330, 422
AluI	AGCT	6 cut(s)	41, 94, 126, 293, 330, 422
Alw21I	GWGCWC	2 cut(s)	332, 570
AoxI	GGCC	2 cut(s)	430, 448
ApeKI	GCWGC	2 cut(s)	337, 589
ApoI	RAATTY	1 cut(s)	194
Asp700I	GAANNNNTTC	1 cut(s)	127
AspLEI	GCGC	1 cut(s)	25
AspS9I	GGNCC	5 cut(s)	168, 236, 378, 431, 449
AsuHPI	GGTGA	3 cut(s)	149, 153, 218
AvaII	GGWCC	3 cut(s)	168, 236, 378
BanII	GRGCYC	1 cut(s)	332
BbsI	GAAGAC	1 cut(s)	261
Bbv12I	GWGCWC	2 cut(s)	332, 570
BbvI	GCAGC	2 cut(s)	324, 576
BccI	CCATC	2 cut(s)	7, 424
BciT130I	CCWGG	2 cut(s)	285, 321
BciVI	GTATCC	1 cut(s)	291
BclI	TGATCA	1 cut(s)	472
BfmI	CTRYAG	2 cut(s)	338, 442
BfuAI	ACCTGC	1 cut(s)	561
BfuI	GTATCC	1 cut(s)	291
BisI	GCNGC	3 cut(s)	26, 338, 590
BlsI	GCNGC	3 cut(s)	27, 339, 591
Bme1390I	CCNGG	2 cut(s)	285, 321
Bme18I	GGWCC	3 cut(s)	168, 236, 378
BmgT120I	GGNCC	5 cut(s)	168, 236, 378, 431, 449
BmiI	GGNNCC	5 cut(s)	170, 237, 238, 379, 451
BmrFI	CCNGG	2 cut(s)	285, 321
BmsI	GCATC	1 cut(s)	475
BpiI	GAAGAC	1 cut(s)	261
BplI	GAGNNNNNCTC	4 cut(s)	83, 115, 242, 274
Bpu10I	CCTNAGC	1 cut(s)	62
BpuEI	CTTGAG	1 cut(s)	476
BsaAI	YACGTR	1 cut(s)	580
BsaJI	CCNNGG	2 cut(s)	164, 284
Bsc4I	CCNNNNNNNGG	2 cut(s)	178, 422
Bse1I	ACTGG	2 cut(s)	590, 643
BseBI	CCWGG	2 cut(s)	285, 321
BseDI	CCNNGG	2 cut(s)	164, 284
BseGI	GGATG	2 cut(s)	390, 475
BseLI	CCNNNNNNNGG	2 cut(s)	178, 422
BseMII	CTCAG	2 cut(s)	76, 240
BseNI	ACTGG	2 cut(s)	590, 643
BseRI	GAGGAG	3 cut(s)	202, 224, 533
BseXI	GCAGC	2 cut(s)	324, 576
BsgI	GTGCAG	2 cut(s)	539, 575
Bsh1236I	CGCG	1 cut(s)	25
BshFI	GGCC	2 cut(s)	432, 450
BsiHKAI	GWGCWC	2 cut(s)	332, 570
BslFI	GGGAC	2 cut(s)	154, 222
BslI	CCNNNNNNNGG	2 cut(s)	178, 422
BsmFI	GGGAC	2 cut(s)	154, 222
BsmI	GAATGC	1 cut(s)	455
BsnI	GGCC	2 cut(s)	432, 450
Bsp1286I	GDGCHC	2 cut(s)	332, 570
Bsp143I	GATC	1 cut(s)	472
BspACI	CCGC	3 cut(s)	25, 204, 453
BspANI	GGCC	2 cut(s)	432, 450
BspCNI	CTCAG	2 cut(s)	75, 241
BspFNI	CGCG	1 cut(s)	25
BspLI	GGNNCC	5 cut(s)	170, 237, 238, 379, 451
BspMAI	CTGCAG	1 cut(s)	342
BspMI	ACCTGC	1 cut(s)	561
BspQI	GCTCTTC	1 cut(s)	133
BsrBI	CCGCTC	1 cut(s)	204
BsrI	ACTGG	2 cut(s)	590, 643
BssECI	CCNNGG	2 cut(s)	164, 284
BssMI	GATC	1 cut(s)	472
Bst2UI	CCWGG	2 cut(s)	285, 321
Bst4CI	ACNGT	2 cut(s)	168, 572
Bst6I	CTCTTC	1 cut(s)	133
BstBAI	YACGTR	1 cut(s)	580
BstDEI	CTNAG	2 cut(s)	62, 249
BstDSI	CCRYGG	1 cut(s)	164
BstF5I	GGATG	2 cut(s)	390, 475
BstFNI	CGCG	1 cut(s)	25
BstHHI	GCGC	1 cut(s)	25
BstKTI	GATC	1 cut(s)	475
BstMBI	GATC	1 cut(s)	472
BstMWI	GCNNNNNNNGC	1 cut(s)	224
BstNI	CCWGG	2 cut(s)	285, 321
BstSCI	CCNGG	2 cut(s)	283, 319
BstSFI	CTRYAG	2 cut(s)	338, 442
BstUI	CGCG	1 cut(s)	25
BstV1I	GCAGC	2 cut(s)	324, 576
BstV2I	GAAGAC	1 cut(s)	261
BsuI	GTATCC	1 cut(s)	291
BsuRI	GGCC	2 cut(s)	432, 450
BtgI	CCRYGG	1 cut(s)	164
BtgZI	GCGATG	1 cut(s)	26
BtsCI	GGATG	2 cut(s)	390, 475
BtsI	GCAGTG	1 cut(s)	358
BtsIMutI	CAGTG	1 cut(s)	358
BveI	ACCTGC	1 cut(s)	561
CfoI	GCGC	1 cut(s)	25
Cfr13I	GGNCC	5 cut(s)	168, 236, 378, 431, 449
CviAII	CATG	1 cut(s)	608
DdeI	CTNAG	2 cut(s)	62, 249
DpnI	GATC	1 cut(s)	474
DpnII	GATC	1 cut(s)	472
Eam1104I	CTCTTC	1 cut(s)	133
EarI	CTCTTC	1 cut(s)	133
Ecl136II	GAGCTC	1 cut(s)	330
Eco24I	GRGCYC	1 cut(s)	332
Eco47I	GGWCC	3 cut(s)	168, 236, 378
Eco53kI	GAGCTC	1 cut(s)	330
EcoICRI	GAGCTC	1 cut(s)	330
EcoO109I	RGGNCCY	2 cut(s)	236, 449
EcoRII	CCWGG	2 cut(s)	283, 319
EcoT38I	GRGCYC	1 cut(s)	332
FaeI	CATG	1 cut(s)	611
FaiI	YATR	5 cut(s)	307, 396, 405, 596, 609
FaqI	GGGAC	2 cut(s)	154, 222
FatI	CATG	1 cut(s)	607
FauI	CCCGC	1 cut(s)	460
FbaI	TGATCA	1 cut(s)	472
FblI	GTMKAC	1 cut(s)	441
Fnu4HI	GCNGC	3 cut(s)	26, 338, 590
FokI	GGATG	2 cut(s)	377, 482
FriOI	GRGCYC	1 cut(s)	332
Fsp4HI	GCNGC	3 cut(s)	26, 338, 590
GlaI	GCGC	1 cut(s)	24
GluI	GCNGC	3 cut(s)	26, 338, 590
HaeIII	GGCC	2 cut(s)	432, 450
HhaI	GCGC	1 cut(s)	25
Hin1II	CATG	1 cut(s)	611
Hin6I	GCGC	1 cut(s)	23
HinP1I	GCGC	1 cut(s)	23
HindIII	AAGCTT	1 cut(s)	291
HinfI	GANTC	4 cut(s)	158, 257, 602, 639
HphI	GGTGA	3 cut(s)	149, 153, 218
Hpy166II	GTNNAC	2 cut(s)	442, 583
Hpy188I	TCNGA	2 cut(s)	79, 250
Hpy188III	TCNNGA	1 cut(s)	113
Hpy8I	GTNNAC	2 cut(s)	442, 583
HpyAV	CCTTC	2 cut(s)	295, 444
HpyCH4III	ACNGT	2 cut(s)	168, 572
HpyCH4IV	ACGT	1 cut(s)	579
HpyCH4V	TGCA	7 cut(s)	36, 54, 73, 340, 351, 556, 592
HpyF10VI	GCNNNNNNNGC	1 cut(s)	224
HpyF3I	CTNAG	2 cut(s)	62, 249
HpySE526I	ACGT	1 cut(s)	579
Hsp92II	CATG	1 cut(s)	611
HspAI	GCGC	1 cut(s)	23
KflI	GGGWCCC	1 cut(s)	236
Ksp22I	TGATCA	1 cut(s)	472
Kzo9I	GATC	1 cut(s)	472
LguI	GCTCTTC	1 cut(s)	133
Lsp1109I	GCAGC	2 cut(s)	324, 576
LweI	GCATC	1 cut(s)	475
MaeII	ACGT	1 cut(s)	579
MaeIII	GTNAC	2 cut(s)	477, 632
MalI	GATC	1 cut(s)	474
MbiI	CCGCTC	1 cut(s)	204
MboI	GATC	1 cut(s)	472
MboII	GAAGA	4 cut(s)	120, 266, 325, 401
MhlI	GDGCHC	2 cut(s)	332, 570
MluCI	AATT	1 cut(s)	194
MlyI	GAGTC	1 cut(s)	251
MroXI	GAANNNNTTC	1 cut(s)	127
MspA1I	CMGCKG	1 cut(s)	422
MspR9I	CCNGG	2 cut(s)	285, 321
Mva1269I	GAATGC	1 cut(s)	455
MvaI	CCWGG	2 cut(s)	285, 321
MvnI	CGCG	1 cut(s)	25
MwoI	GCNNNNNNNGC	1 cut(s)	224
NdeII	GATC	1 cut(s)	472
NlaIII	CATG	1 cut(s)	611
NlaIV	GGNNCC	5 cut(s)	170, 237, 238, 379, 451
NmuCI	GTSAC	1 cut(s)	632
PaqCI	CACCTGC	1 cut(s)	561
PciSI	GCTCTTC	1 cut(s)	133
PcsI	WCGNNNNNNNCGW	1 cut(s)	576
PctI	GAATGC	1 cut(s)	455
PdmI	GAANNNNTTC	1 cut(s)	127
PfeI	GAWTC	3 cut(s)	158, 602, 639
PflMI	CCANNNNNTGG	2 cut(s)	178, 422
PkrI	GCNGC	3 cut(s)	27, 339, 591
PleI	GAGTC	1 cut(s)	251
PpsI	GAGTC	1 cut(s)	251
Ppu21I	YACGTR	1 cut(s)	580
PpuMI	RGGWCCY	1 cut(s)	236
Psp124BI	GAGCTC	1 cut(s)	332
Psp5II	RGGWCCY	1 cut(s)	236
Psp6I	CCWGG	2 cut(s)	283, 319
PspGI	CCWGG	2 cut(s)	283, 319
PspN4I	GGNNCC	5 cut(s)	170, 237, 238, 379, 451
PspPI	GGNCC	5 cut(s)	168, 236, 378, 431, 449
PspPPI	RGGWCCY	1 cut(s)	236
PstI	CTGCAG	1 cut(s)	342
PvuII	CAGCTG	1 cut(s)	422
SacI	GAGCTC	1 cut(s)	332
SapI	GCTCTTC	1 cut(s)	133
SatI	GCNGC	3 cut(s)	26, 338, 590
Sau3AI	GATC	1 cut(s)	472
Sau96I	GGNCC	5 cut(s)	168, 236, 378, 431, 449
SchI	GAGTC	1 cut(s)	251
ScrFI	CCNGG	2 cut(s)	285, 321
SduI	GDGCHC	2 cut(s)	332, 570
SfaNI	GCATC	1 cut(s)	475
SfcI	CTRYAG	2 cut(s)	338, 442
SinI	GGWCC	3 cut(s)	168, 236, 378
SmlI	CTYRAG	1 cut(s)	491
SmoI	CTYRAG	1 cut(s)	491
Sse9I	AATT	1 cut(s)	194
SsiI	CCGC	3 cut(s)	25, 204, 453
SstI	GAGCTC	1 cut(s)	332
StyD4I	CCNGG	2 cut(s)	283, 319
TaaI	ACNGT	2 cut(s)	168, 572
TaiI	ACGT	1 cut(s)	582
TaqI	TCGA	2 cut(s)	5, 345
TasI	AATT	1 cut(s)	194
TauI	GCSGC	1 cut(s)	28
TfiI	GAWTC	3 cut(s)	158, 602, 639
TscAI	CASTG	1 cut(s)	358
TseFI	GTSAC	1 cut(s)	632
TseI	GCWGC	2 cut(s)	337, 589
Tsp45I	GTSAC	1 cut(s)	632
TspDTI	ATGAA	1 cut(s)	314
TspGWI	ACGGA	1 cut(s)	370
TspRI	CASTG	1 cut(s)	358
Van91I	CCANNNNNTGG	2 cut(s)	178, 422
VpaK11BI	GGWCC	3 cut(s)	168, 236, 378
XapI	RAATTY	1 cut(s)	194
XmiI	GTMKAC	1 cut(s)	441
XmnI	GAANNNNTTC	1 cut(s)	127

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.