Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007357

Physical Location & Seq

Genomic Coordinates Reverse (-)

9342384 .. 9345644

Gene Structure 3261 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G054700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 639 bp

ATGCCACTGCCATATAGAATGTCGAAGGCGAACGCTGCATTACGCCAGGGTGGCAAAGCTCTCAAAGATCTCAACTTGCTCAAGGTTTTGCAGTCTGAGATTCAGCATGAGCTTTCCTGTAACCCCCCTGAGGTAAGCCGAAGCTCTTCAATGGGTGAGTTTGTGGTGGATTGCGATTTGCCACAGTCCCAAGATTTGGTTTTGAGGAGGAAGTATGAGAGTGGTGAGGAGGTTGCTGTTTCAGCTTTGTTGGGTCCTTTTAGTCCTGATGGCTTGGAGGGAGTGGAATGTCTTTACCCAAGGGATGTTTTGATGAAGGTGTGTTTGAAGAAGCCTGGTTTGAGCTCAATGCTGCAGTTTGATTGCAGTGTTTATGAGAAAGATGGTATTGGGTCTGGGTTTAAAATCCATAATGCCTATTGTTTTCAACCGTCTGTTGGTTTTGGCCCTTCAGTCTATAACCCCCCATTCAGCGATTTGGACAAGAAATTACAAGTTGAGCTTAAGAAATATCTAGTATCCAAGGGTATTGGAGAAAGCCTGACCAACTTCCTCCTCCACCACCTTCACAAAAAGGAGCAAGCCCAATATGCGGACTGGCTGCACAAACTTGAATCATATGTTGCAAAATCAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006091 GO:0006417 GO:0008150 GO:0008152 GO:0008494 GO:0009060 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0015980 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0032268 GO:0032270 GO:0034248 GO:0034250 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045182 GO:0045333 GO:0045727 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0055114 GO:0060255 GO:0065007 GO:0070013 GO:0070129 GO:0070131 GO:0080090 GO:0090079 GO:0097159 GO:1901363 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko05168 map05168

Pfam Domains

Protein Families

MAM33

Protein Analysis

213

Amino Acids

23.65

Weight (kDa)

6.6

Isoelectric Point (pI)

54.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007357)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41600 AT2G41600 AT2G41600 AT2G41600 AT2G41600 AT2G41600 AT2G41600
fragaria_vesca	FvH4_6g24410
malus_domestica	MD14G1076800.v1.1 MD14G1125800.v1.1
prunus_persica	Prupe.7G054700_v2.0.a1 Prupe.7G054700_v2.0.a1
pyrus_communis	pycom14g06510
rosa_chinensis	RchiOBHm_Chr3g0483391
rosa_laevigata	RLG00000023287
rosa_multiflora	Rmu_sc0006349.1_g000008 Rmu_sc0009753.1_g000002
rosa_roxburghii	Rroxscaffold_6G00398390
rosa_rugosa	Rorug03G0205700
rosa_samantha	Rh3AG254100 Rh3BG291200 Rh3CG288400 Rh3DG284200
rosa_wichuraiana	Rw0G023720 Rw0G023750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	196
AciI	CCGC	1 cut(s)	593
AcuI	CTGAAG	1 cut(s)	435
AfiI	CCNNNNNNNGG	4 cut(s)	130, 196, 437, 592
AflII	CTTAAG	1 cut(s)	503
AgsI	TTSAA	4 cut(s)	150, 328, 428, 614
AjnI	CCWGG	2 cut(s)	45, 334
AluBI	AGCT	6 cut(s)	59, 112, 144, 245, 345, 502
AluI	AGCT	6 cut(s)	59, 112, 144, 245, 345, 502
Alw21I	GWGCWC	1 cut(s)	347
AoxI	GGCC	1 cut(s)	445
ApeKI	GCWGC	3 cut(s)	35, 352, 601
Asp700I	GAANNNNTTC	1 cut(s)	145
AspS9I	GGNCC	2 cut(s)	254, 446
AsuHPI	GGTGA	2 cut(s)	167, 236
AvaII	GGWCC	1 cut(s)	254
AxyI	CCTNAGG	1 cut(s)	129
BanII	GRGCYC	1 cut(s)	347
Bbv12I	GWGCWC	1 cut(s)	347
BbvI	GCAGC	3 cut(s)	22, 339, 588
BccI	CCATC	2 cut(s)	263, 377
BciT130I	CCWGG	2 cut(s)	47, 336
BciVI	GTATCC	1 cut(s)	529
BfaI	CTAG	1 cut(s)	515
BfmI	CTRYAG	1 cut(s)	353
BfrI	CTTAAG	1 cut(s)	503
BfuI	GTATCC	1 cut(s)	529
BglI	GCCNNNNNGGC	1 cut(s)	51
BglII	AGATCT	1 cut(s)	67
BisI	GCNGC	3 cut(s)	36, 353, 602
BlsI	GCNGC	3 cut(s)	37, 354, 603
Bme1390I	CCNGG	2 cut(s)	47, 336
Bme18I	GGWCC	1 cut(s)	254
BmgT120I	GGNCC	2 cut(s)	254, 446
BmiI	GGNNCC	1 cut(s)	255
BmrFI	CCNGG	2 cut(s)	47, 336
BpuEI	CTTGAG	1 cut(s)	65
BsaJI	CCNNGG	3 cut(s)	46, 299, 522
Bsc4I	CCNNNNNNNGG	4 cut(s)	130, 196, 437, 592
Bse1I	ACTGG	1 cut(s)	602
Bse21I	CCTNAGG	1 cut(s)	129
BseBI	CCWGG	2 cut(s)	47, 336
BseDI	CCNNGG	3 cut(s)	46, 299, 522
BseGI	GGATG	1 cut(s)	310
BseLI	CCNNNNNNNGG	4 cut(s)	130, 196, 437, 592
BseMII	CTCAG	2 cut(s)	87, 120
BseNI	ACTGG	1 cut(s)	602
BseRI	GAGGAG	3 cut(s)	220, 242, 545
BseXI	GCAGC	3 cut(s)	22, 339, 588
BsgI	GTGCAG	1 cut(s)	587
BshFI	GGCC	1 cut(s)	447
BsiHKAI	GWGCWC	1 cut(s)	347
BslFI	GGGAC	1 cut(s)	172
BslI	CCNNNNNNNGG	4 cut(s)	130, 196, 437, 592
BsmFI	GGGAC	1 cut(s)	172
BsnI	GGCC	1 cut(s)	447
Bsp1286I	GDGCHC	1 cut(s)	347
Bsp143I	GATC	1 cut(s)	67
BspACI	CCGC	1 cut(s)	593
BspANI	GGCC	1 cut(s)	447
BspCNI	CTCAG	2 cut(s)	88, 121
BspLI	GGNNCC	1 cut(s)	255
BspMAI	CTGCAG	1 cut(s)	357
BspQI	GCTCTTC	1 cut(s)	151
BspTI	CTTAAG	1 cut(s)	503
BsrI	ACTGG	1 cut(s)	602
BssECI	CCNNGG	3 cut(s)	46, 299, 522
BssMI	GATC	1 cut(s)	67
BssT1I	CCWWGG	2 cut(s)	299, 522
Bst2UI	CCWGG	2 cut(s)	47, 336
Bst4CI	ACNGT	2 cut(s)	186, 432
Bst6I	CTCTTC	1 cut(s)	151
BstAFI	CTTAAG	1 cut(s)	503
BstC8I	GCNNGC	1 cut(s)	582
BstDEI	CTNAG	2 cut(s)	96, 129
BstF5I	GGATG	1 cut(s)	310
BstKTI	GATC	1 cut(s)	70
BstMBI	GATC	1 cut(s)	67
BstMWI	GCNNNNNNNGC	4 cut(s)	35, 51, 242, 590
BstNI	CCWGG	2 cut(s)	47, 336
BstSCI	CCNGG	2 cut(s)	45, 334
BstSFI	CTRYAG	1 cut(s)	353
BstV1I	GCAGC	3 cut(s)	22, 339, 588
BstX2I	RGATCY	1 cut(s)	67
BstYI	RGATCY	1 cut(s)	67
Bsu36I	CCTNAGG	1 cut(s)	129
BsuI	GTATCC	1 cut(s)	529
BsuRI	GGCC	1 cut(s)	447
BtsCI	GGATG	1 cut(s)	310
BtsI	GCAGTG	2 cut(s)	5, 373
BtsIMutI	CAGTG	2 cut(s)	5, 373
Cac8I	GCNNGC	1 cut(s)	582
Cfr13I	GGNCC	2 cut(s)	254, 446
CviAII	CATG	1 cut(s)	107
DdeI	CTNAG	2 cut(s)	96, 129
DpnI	GATC	1 cut(s)	69
DpnII	GATC	1 cut(s)	67
DraI	TTTAAA	1 cut(s)	403
Eam1104I	CTCTTC	1 cut(s)	151
EarI	CTCTTC	1 cut(s)	151
Ecl136II	GAGCTC	1 cut(s)	345
Eco130I	CCWWGG	2 cut(s)	299, 522
Eco24I	GRGCYC	1 cut(s)	347
Eco47I	GGWCC	1 cut(s)	254
Eco53kI	GAGCTC	1 cut(s)	345
Eco57I	CTGAAG	1 cut(s)	435
Eco81I	CCTNAGG	1 cut(s)	129
EcoICRI	GAGCTC	1 cut(s)	345
EcoO109I	RGGNCCY	1 cut(s)	254
EcoRII	CCWGG	2 cut(s)	45, 334
EcoT14I	CCWWGG	2 cut(s)	299, 522
EcoT38I	GRGCYC	1 cut(s)	347
ErhI	CCWWGG	2 cut(s)	299, 522
FaeI	CATG	1 cut(s)	110
FalI	AAGNNNNNCTT	2 cut(s)	486, 518
FaqI	GGGAC	1 cut(s)	172
FatI	CATG	1 cut(s)	106
FauNDI	CATATG	1 cut(s)	619
Fnu4HI	GCNGC	3 cut(s)	36, 353, 602
FokI	GGATG	1 cut(s)	317
FriOI	GRGCYC	1 cut(s)	347
Fsp4HI	GCNGC	3 cut(s)	36, 353, 602
FspBI	CTAG	1 cut(s)	515
GluI	GCNGC	3 cut(s)	36, 353, 602
HaeIII	GGCC	1 cut(s)	447
Hin1II	CATG	1 cut(s)	110
HinfI	GANTC	2 cut(s)	100, 614
HphI	GGTGA	2 cut(s)	167, 236
Hpy188I	TCNGA	2 cut(s)	97, 634
Hpy188III	TCNNGA	1 cut(s)	266
HpyAV	CCTTC	4 cut(s)	19, 310, 459, 575
HpyCH4III	ACNGT	2 cut(s)	186, 432
HpyCH4V	TGCA	6 cut(s)	38, 91, 355, 366, 604, 626
HpyF10VI	GCNNNNNNNGC	4 cut(s)	35, 51, 242, 590
HpyF3I	CTNAG	2 cut(s)	96, 129
Hsp92II	CATG	1 cut(s)	110
Kzo9I	GATC	1 cut(s)	67
LguI	GCTCTTC	1 cut(s)	151
LmnI	GCTCC	1 cut(s)	577
Lsp1109I	GCAGC	3 cut(s)	22, 339, 588
MaeI	CTAG	1 cut(s)	515
MaeIII	GTNAC	1 cut(s)	119
MalI	GATC	1 cut(s)	69
MboI	GATC	1 cut(s)	67
MboII	GAAGA	2 cut(s)	138, 340
MflI	RGATCY	1 cut(s)	67
MhlI	GDGCHC	1 cut(s)	347
MluCI	AATT	1 cut(s)	488
MnlI	CCTC	8 cut(s)	124, 198, 201, 220, 223, 271, 563, 566
MroXI	GAANNNNTTC	1 cut(s)	145
MseI	TTAA	2 cut(s)	402, 504
MspCI	CTTAAG	1 cut(s)	503
MspR9I	CCNGG	2 cut(s)	47, 336
MvaI	CCWGG	2 cut(s)	47, 336
MwoI	GCNNNNNNNGC	4 cut(s)	35, 51, 242, 590
NdeI	CATATG	1 cut(s)	619
NdeII	GATC	1 cut(s)	67
NlaIII	CATG	1 cut(s)	110
NlaIV	GGNNCC	1 cut(s)	255
PciSI	GCTCTTC	1 cut(s)	151
PdmI	GAANNNNTTC	1 cut(s)	145
PfeI	GAWTC	2 cut(s)	100, 614
PflMI	CCANNNNNTGG	1 cut(s)	196
PkrI	GCNGC	3 cut(s)	37, 354, 603
PpuMI	RGGWCCY	1 cut(s)	254
Psp124BI	GAGCTC	1 cut(s)	347
Psp5II	RGGWCCY	1 cut(s)	254
Psp6I	CCWGG	2 cut(s)	45, 334
PspGI	CCWGG	2 cut(s)	45, 334
PspN4I	GGNNCC	1 cut(s)	255
PspPI	GGNCC	2 cut(s)	254, 446
PspPPI	RGGWCCY	1 cut(s)	254
PstI	CTGCAG	1 cut(s)	357
PsuI	RGATCY	1 cut(s)	67
SacI	GAGCTC	1 cut(s)	347
SapI	GCTCTTC	1 cut(s)	151
SaqAI	TTAA	2 cut(s)	402, 504
SatI	GCNGC	3 cut(s)	36, 353, 602
Sau3AI	GATC	1 cut(s)	67
Sau96I	GGNCC	2 cut(s)	254, 446
ScrFI	CCNGG	2 cut(s)	47, 336
SduI	GDGCHC	1 cut(s)	347
SfcI	CTRYAG	1 cut(s)	353
SinI	GGWCC	1 cut(s)	254
SmlI	CTYRAG	2 cut(s)	80, 503
SmoI	CTYRAG	2 cut(s)	80, 503
Sse9I	AATT	1 cut(s)	488
SsiI	CCGC	1 cut(s)	593
SspMI	CTAG	1 cut(s)	515
SstI	GAGCTC	1 cut(s)	347
StyD4I	CCNGG	2 cut(s)	45, 334
StyI	CCWWGG	2 cut(s)	299, 522
TaaI	ACNGT	2 cut(s)	186, 432
TaqI	TCGA	1 cut(s)	23
TasI	AATT	1 cut(s)	488
TfiI	GAWTC	2 cut(s)	100, 614
Tru1I	TTAA	2 cut(s)	402, 504
Tru9I	TTAA	2 cut(s)	402, 504
TscAI	CASTG	2 cut(s)	12, 373
TseI	GCWGC	3 cut(s)	35, 352, 601
TspDTI	ATGAA	1 cut(s)	329
TspRI	CASTG	2 cut(s)	12, 373
Van91I	CCANNNNNTGG	1 cut(s)	196
Vha464I	CTTAAG	1 cut(s)	503
VpaK11BI	GGWCC	1 cut(s)	254
XmnI	GAANNNNTTC	1 cut(s)	145
XspI	CTAG	1 cut(s)	515

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.