MD14G1105100.v1.1
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
16242669 .. 16252829
10161 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1105100.v1.1.491

Sequence Viewer

Length: 3663 bp
ATGAACACTCAGTTAGAGTCTCATAAAGATGAGAATGGGGGGTCAAAGTCACACAAAGATGAAAAGGAGGGGTGTGAAAATTTAAATGGGATTTCAACTGCAAATACTGAACCAGCGGAAAGTTTCAGCAGCACAGTTGAAGACAACCAGATATTATCTCTGGTGGAGTGGTTAAATTTTATTGTCCCTTATTTAAGATTGCCATTGGATGCTACCGAGGAGGAACTCAGAGCCTGCTTAATTGATGGCACTGTTCTATGCAGAATTTTAAATAAGCTGTGTCCTGGTTCAGTTGAAATGGGAGGGAGTTCGGACCCCGGTTTCGCAAATGTCAAGAGGTTTCTGGTGGCTGTGGATGAATTAGGATTCCCCCGCTTTGACCTGATCGACCTAGAGCAGGGATCTCTGGTACCAGTTTTGCAATGCCTTGGTGCACTTAAATCTTCTTTTGACTTTGGTTTTTGGGGAGAGAACAGTAAACACCTAACAAGGACAGGAAGTGATTTGTTGGAGATAGAATCTTTAAGGGGAATTGATTGTTCCCGAGGGGATATCTCAACATTTGGACAACAATGTACTCAAAATAGAGAAGAGACACAAGGAAATTCAGTTGATTCAACATCTCAAGTGACAGATCCATCAGCTGATTTAGTACATCATATTGGACAGCAACTGAAGCAGGGGACTTTTGTTGATTTTTCTAATGCTAAGATTTTGGAATCAATCAAATCAACCAGTTTAGATAATGCATCTACTCGATCACTTTTCAATGTTGGCCATAAGATTCTGGATGACAGTATTGACAGAAACAATGGTGATGTACCTCATCGCGTAGCATTTCTTCTGAAAAAAGTCATGCAAGTGACTGAGCAGCGATTTGCAAATCAGGCAGTTAACTTGAGAATTCAAAACAATATATATAAGGCCCGTGAGGAGAAGTATCTATTGAAAATAAAAGTACTTGAGACCCTCACATCTGGGACTGCCGAAGAAAATGAGGTTGTTCTGAAACAGCTTCAGAATATCAAGCTTGAGAAGTTTGATATAGAGGAGCAGAAAAAACTTGAGGAGGAGGATGCAATGCGATTAAAGGAAGAGAAGGATCACAGGGATTCACAGATTTCAACACTGAAACGGGAACTAGAAATGGCCACAAGTCGACATGAAAGTTACTGCCAGAAGTTAGAGGCAAATGCAAAAGAAGCTAAACTTCAACTGGAAAGGAAGTTAAAGGAACTCGAGTGTATACTAACAGATTCAAAGCAGAACCAGAAAGAACTAGAGGCATCCTTGGAAAATGAATCAGGGAGATGGAAAAATAAAGAACGCACTTATCAAAGCTTCGTAGCTTGCCAATCTGGAGCTTTGCAGGAATTAAGTGCCACTTTGGAGTCCACTAGACGTGAAATCTTGAAGACAAAAAGCAGTTGTTCTGAAGAATTTAATTACTTGGGTTTGAAGCTTAAAGAACTAACAGATGCTGCTGAAAAGTATCATGCTGTTCTCGATGAAAATCGGAAATTGTATAATGAGGTTCAGGATTTGAAAGGTAATATTAGAGTGTACTGTCGAATAAGACCATTTCTTCCGGGTCAAAGCCAAAAGGAAACCACCATAGAATATATTGGTGAAAATGGTGATCTAGTTATCGCAAATCCCTCTAAACAAGGAAAAGACAGCCGCAGGTTGTTTAAATTTAACAAAGTATTTGGTCCTGCAGCTACACAAGCGGACGTATTTTTAGACACCCAACCATTGATTCGTTCTGTCCTTGATGGATACAATGTTTGTATATTTGCCTATGGTCAAACTGGTTCAGGAAAGACCTATACGATGTCTGGGCCTAGTGTATCCTCAACAGATGACTGGGGTATCAACTATCGAGCATTAAATGATCTTTTCCAAATATCTCAGAGCAGGAAAAGCTCCATAGCTTATGAAGTTGGTGTTCAAATGGTAGAGATATATAATGAACAAGTTCGTGATCTACTCTCAAATTTTGTTTCCTTTAACTTGCACACACTTGGGATTTGGAATACTACCCAGCCAAATGGGTTAGCTGTCCCTGAAGCAAGCATGCATCCTGTTAACTCAACTGCAGATGTCCTAAAGTTAATGAATATTGGGTTGATGAACCGGGCAGTCGGTGCTACTGCCCTAAATGAACGAAGTAGCCGATCTCATAGTGTTTTGACTGTTCATGTTCGTGGAGTGGACTTGAAGTCTGACACTTCTCTGCGTGGTAGTCTACATCTCGTGGATCTTGCCGGAAGCGAACGAGTGGATCGATCTGAAGCTACTGGAGATAGGCTGAGGGAGGCACAGCATATAAACAAGTCACTGTCTGCTCTCGGGGATGTGATTTTTGCTCTTGCACAGAAGTCTTCACATGTACCGTATAGAAACAGCAAATTAACTCAAGTGCTTCAGAGTTCTTTAGGTGGTCAAGCAAAGACACTCATGTTTGTACAGCTGAATCCGGATGTTGAATCCTTCGCTCAGACTATAAGTACACTGAAGTTTGCAGAGAGGGTTTCTGGTGTTGAATTAGGTGCTGCCCGGAGCAACAAAGAGGGAAGATATGTAAGAGAACTTATGGAGCAGGTGGCATCCTTCAGGGACACAATTGCTAAGAAAGATGAAGAGATTGAACGATTGCTGAAGGTCAATAGTAATGGGTTACACCATGGCATGAGCTCACTAAGATTTGCGTCTTCCTCTCCAAGAAGACATTCAATTGGGTCTCCTCGACTGAGCCAAAAGAGCCCAGGTAGAAGAGGCTTGGGATATTATAGTGATAAGCGTTCTGAAGTTAGTTCCCAGCTTTCAACAGATGACTTTAGAAATCGTAGGGAAGATTTTCCTCGGTCAAAGCATGGAGGAGAGGCAAATGATTCTGAAGGTAGTTCTCAGTCAATGGATGACTTTAGACATCATAAGGAACATATGCCACAGTCAAAGCATGAAGGTGAGGCAAAGCATTCTGAAGATAGTTCGCAGCAGTCGGCAGATGACTTTAGAGATAATATGGAGCATTCGCCTCTGTCAAAGCACAGAGGTGAGACAAAGAATTCTGAAGCTGGTTCTGATAAGTCACTAGATGACTTTAGAAATCATGAGGGCCATTCAACTCAACCAAAGTATGGAGGTGGAGGAAAGCATTCTGAAGGCAGTTCTGAGCAGTCAATGGATGACTTTAGACGTCATAAGGAACACTCGACTCAACAAAAGGATGGAGATGAGTCAAGTCAGAACATCACTGAAGATTTTGAGCTCGTGGGCTTTGGTGAGGAAGATTCTGGGGAGAGATTAAGCGACATATCTGATGGTGGTCTCTCAATGGGAACAGAAACTGAGGGTTCCATGGCCAGTTTTATGGAGTTTACTCTTTTCCCTGATGTTACAAAAGCAACAGAAAGTACAAATGCTGGAAATACAGAAGTCATGAAAACTCAAATTGAGAATGCTCAGGGCGAAAAGACACCATCCCAGCGCACAGTAAGGTTTGCACCATCTAAACTTCCAAAGCCATCACCTAAGTTGGCAGAAACAAAAGCTACTCGGACGTCTGTGATCAGAAGTTCTTCAAAGGTTTTGCCAAGTCCTTGGAAATCTACTGCCGGCAGCAGCTCATCAGTGAGGTCTTCCAAACGCTGGCATTAA

Protein Analysis

1221

Amino Acids

136.0

Weight (kDa)

5.94

Isoelectric Point (pI)

51.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CH PF00307 54 - 146 4.4e-06 Calponin homology (CH) domain
Microtub_bd PF16796 505 - 664 6.1e-44 Microtubule binding
Kinesin PF00225 524 - 846 1.4e-105 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2593
AatII GACGTC 2 cut(s) 3205, 3569
Acc36I ACCTGC 2 cut(s) 1674, 2593
Acc65I GGTACC 1 cut(s) 409
AccB1I GGYRCC 1 cut(s) 409
AccB7I CCANNNNNTGG 2 cut(s) 3143, 3654
AccI GTMKAC 3 cut(s) 1159, 1246, 2248
AccII CGCG 1 cut(s) 831
AccIII TCCGGA 1 cut(s) 2479
AciI CCGC 4 cut(s) 116, 373, 1681, 1730
AclWI GGATC 5 cut(s) 409, 629, 1110, 2268, 2292
AcoI YGGCCR 3 cut(s) 775, 1149, 3366
AcsI RAATTY 9 cut(s) 79, 175, 264, 604, 903, 1439, 1694, 1996, 3070
AcyI GRCGYC 2 cut(s) 3202, 3566
AfiI CCNNNNNNNGG 3 cut(s) 397, 3143, 3654
AflIII ACRYGT 1 cut(s) 2389
AhdI GACNNNNNGTC 1 cut(s) 2221
AjiI CACGTC 1 cut(s) 1403
AjnI CCWGG 2 cut(s) 283, 2767
AjuI GAANNNNNNNTTGG 4 cut(s) 1743, 1775, 2716, 2748
AleI CACNNNNGTG 1 cut(s) 3057
Alw21I GWGCWC 3 cut(s) 436, 2699, 3276
Alw26I GTCTC 6 cut(s) 24, 587, 959, 2748, 3056, 3338
Alw44I GTGCAC 1 cut(s) 432
AlwI GGATC 5 cut(s) 409, 629, 1110, 2268, 2292
AlwNI CAGNNNCTG 4 cut(s) 234, 673, 1481, 3353
Ama87I CYCGRG 3 cut(s) 543, 1238, 2351
Aor13HI TCCGGA 1 cut(s) 2479
AoxI GGCC 6 cut(s) 775, 924, 1149, 1841, 3121, 3366
ApaLI GTGCAC 1 cut(s) 432
ApeKI GCWGC 8 cut(s) 129, 871, 1481, 1718, 2555, 2998, 3624, 3627
ApoI RAATTY 9 cut(s) 79, 175, 264, 604, 903, 1439, 1694, 1996, 3070
ArsI GACNNNNNNTTYG 2 cut(s) 305, 337
Asp700I GAANNNNTTC 5 cut(s) 1977, 2731, 2859, 3160, 3583
Asp718I GGTACC 1 cut(s) 409
AspLEI GCGC 1 cut(s) 3495
AspS9I GGNCC 5 cut(s) 313, 925, 1712, 1841, 3121
AsuC2I CCSGG 4 cut(s) 318, 1590, 2138, 2560
AsuHPI GGTGA 7 cut(s) 827, 1640, 1649, 2981, 3071, 3299, 3525
AvaI CYCGRG 3 cut(s) 543, 1238, 2351
AvaII GGWCC 2 cut(s) 313, 1712
BaeGI GKGCMC 1 cut(s) 436
BaeI ACNNNNGTAYC 2 cut(s) 1855, 1888
BalI TGGCCA 3 cut(s) 777, 1151, 3368
BanI GGYRCC 1 cut(s) 409
BanII GRGCYC 3 cut(s) 2699, 2768, 3276
BarI GAAGNNNNNNTAC 2 cut(s) 825, 857
BauI CACGAG 2 cut(s) 2255, 3275
BbsI GAAGAC 6 cut(s) 147, 1421, 2376, 2706, 2734, 3636
Bbv12I GWGCWC 3 cut(s) 436, 2699, 3276
BbvCI CCTCAGC 1 cut(s) 2312
BbvI GCAGC 8 cut(s) 141, 883, 1468, 1730, 2542, 3010, 3636, 3639
BccI CCATC 9 cut(s) 239, 646, 1305, 1769, 3227, 3320, 3493, 3520, 3538
BciT130I CCWGG 2 cut(s) 285, 2769
BciVI GTATCC 2 cut(s) 1772, 1861
BclI TGATCA 1 cut(s) 3573
BcnI CCSGG 4 cut(s) 318, 1590, 2138, 2560
BcoDI GTCTC 6 cut(s) 24, 587, 959, 2748, 3056, 3338
BfaI CTAG 7 cut(s) 392, 1142, 1280, 1398, 1643, 1845, 3098
BfmI CTRYAG 2 cut(s) 1716, 2097
BfuAI ACCTGC 2 cut(s) 1674, 2593
BfuI GTATCC 2 cut(s) 1772, 1861
BisI GCNGC 9 cut(s) 130, 872, 1482, 1681, 1719, 2556, 2999, 3625, 3628
BlsI GCNGC 9 cut(s) 131, 873, 1483, 1682, 1720, 2557, 3000, 3626, 3629
BmcAI AGTACT 1 cut(s) 960
Bme1390I CCNGG 6 cut(s) 285, 318, 1590, 2138, 2560, 2769
Bme18I GGWCC 2 cut(s) 313, 1712
BmeRI GACNNNNNGTC 1 cut(s) 2221
BmeT110I CYCGRG 3 cut(s) 543, 1238, 2351
BmgBI CACGTC 1 cut(s) 1403
BmgT120I GGNCC 5 cut(s) 313, 925, 1712, 1841, 3121
BmiI GGNNCC 3 cut(s) 315, 411, 3361
BmrFI CCNGG 6 cut(s) 285, 318, 1590, 2138, 2560, 2769
BmrI ACTGGG 1 cut(s) 1876
BmsI GCATC 7 cut(s) 199, 758, 1066, 1295, 1468, 2089, 2618
BmuI ACTGGG 1 cut(s) 1876
BpiI GAAGAC 6 cut(s) 147, 1421, 2376, 2706, 2734, 3636
BpmI CTGGAG 2 cut(s) 1380, 2322
Bpu10I CCTNAGC 2 cut(s) 2312, 3468
BpuEI CTTGAG 6 cut(s) 609, 919, 983, 1052, 1085, 2403
BpuMI CCSGG 4 cut(s) 318, 1590, 2138, 2560
Bsa29I ATCGAT 1 cut(s) 2287
BsaBI GATNNNNATC 1 cut(s) 1512
BsaHI GRCGYC 2 cut(s) 3202, 3566
BsaI GGTCTC 3 cut(s) 959, 2748, 3338
BsaWI WCCGGW 1 cut(s) 2479
Bsc4I CCNNNNNNNGG 3 cut(s) 397, 3143, 3654
Bse118I RCCGGY 1 cut(s) 3620
Bse1I ACTGG 7 cut(s) 413, 735, 1221, 1816, 1871, 2305, 3369
Bse3DI GCAATG 2 cut(s) 428, 1086
Bse8I GATNNNNATC 1 cut(s) 1512
BseAI TCCGGA 1 cut(s) 2479
BseBI CCWGG 2 cut(s) 285, 2769
BseCI ATCGAT 1 cut(s) 2287
BseJI GATNNNNATC 1 cut(s) 1512
BseLI CCNNNNNNNGG 3 cut(s) 397, 3143, 3654
BseMI GCAATG 2 cut(s) 428, 1086
BseNI ACTGG 7 cut(s) 413, 735, 1221, 1816, 1871, 2305, 3369
BseRI GAGGAG 7 cut(s) 233, 947, 1064, 1082, 1085, 2736, 2895
BseSI GKGCMC 1 cut(s) 436
BseXI GCAGC 8 cut(s) 141, 883, 1468, 1730, 2542, 3010, 3636, 3639
BseYI CCCAGC 3 cut(s) 2043, 2820, 3489
Bsh1236I CGCG 1 cut(s) 831
BshFI GGCC 6 cut(s) 777, 926, 1151, 1843, 3123, 3368
BshNI GGYRCC 1 cut(s) 409
BshVI ATCGAT 1 cut(s) 2287
BsiHKAI GWGCWC 3 cut(s) 436, 2699, 3276
BsiHKCI CYCGRG 3 cut(s) 543, 1238, 2351
BsiSI CCGG 7 cut(s) 318, 1589, 2137, 2268, 2480, 2560, 3621
BslFI GGGAC 5 cut(s) 170, 697, 994, 2048, 2633
BslI CCNNNNNNNGG 3 cut(s) 397, 3143, 3654
BsmAI GTCTC 6 cut(s) 24, 587, 959, 2748, 3056, 3338
BsmFI GGGAC 5 cut(s) 170, 697, 994, 2048, 2633
BsmI GAATGC 4 cut(s) 2980, 3034, 3160, 3469
BsnI GGCC 6 cut(s) 777, 926, 1151, 1843, 3123, 3368
Bso31I GGTCTC 3 cut(s) 959, 2748, 3338
BsoBI CYCGRG 3 cut(s) 543, 1238, 2351
Bsp1286I GDGCHC 4 cut(s) 436, 2699, 2768, 3276
Bsp13I TCCGGA 1 cut(s) 2479
Bsp1407I TGTACA 1 cut(s) 2467
Bsp19I CCATGG 2 cut(s) 2686, 3363
BspACI CCGC 4 cut(s) 116, 373, 1681, 1730
BspANI GGCC 6 cut(s) 777, 926, 1151, 1843, 3123, 3368
BspDI ATCGAT 1 cut(s) 2287
BspEI TCCGGA 1 cut(s) 2479
BspFNI CGCG 1 cut(s) 831
BspHI TCATGA 2 cut(s) 3115, 3444
BspLI GGNNCC 3 cut(s) 315, 411, 3361
BspMAI CTGCAG 2 cut(s) 1720, 2101
BspMI ACCTGC 2 cut(s) 1674, 2593
BspPI GGATC 5 cut(s) 409, 629, 1110, 2268, 2292
BspT107I GGYRCC 1 cut(s) 409
BspTNI GGTCTC 3 cut(s) 959, 2748, 3338
BsrDI GCAATG 2 cut(s) 428, 1086
BsrFI RCCGGY 1 cut(s) 3620
BsrGI TGTACA 1 cut(s) 2467
BsrI ACTGG 7 cut(s) 413, 735, 1221, 1816, 1871, 2305, 3369
BssAI RCCGGY 1 cut(s) 3620
BssNAI GTATAC 1 cut(s) 1247
BssNI GRCGYC 2 cut(s) 3202, 3566
BssSI CACGAG 2 cut(s) 2255, 3275
BssT1I CCWWGG 5 cut(s) 427, 1290, 2686, 3363, 3605
Bst1107I GTATAC 1 cut(s) 1247
Bst2BI CACGAG 2 cut(s) 2255, 3275
Bst2UI CCWGG 2 cut(s) 285, 2769
Bst6I CTCTTC 4 cut(s) 585, 1089, 2637, 2770
BstACI GRCGYC 2 cut(s) 3202, 3566
BstAPI GCANNNNNTGC 1 cut(s) 2147
BstAUI TGTACA 1 cut(s) 2467
BstC8I GCNNGC 6 cut(s) 235, 1351, 2074, 2078, 3622, 3656
BstDSI CCRYGG 2 cut(s) 2686, 3363
BstENI CCTNNNNNAGG 1 cut(s) 395
BstFNI CGCG 1 cut(s) 831
BstHHI GCGC 1 cut(s) 3495
BstMAI GTCTC 6 cut(s) 24, 587, 959, 2748, 3056, 3338
BstMWI GCNNNNNNNGC 7 cut(s) 676, 887, 1202, 1727, 1923, 2147, 2763
BstNI CCWGG 2 cut(s) 285, 2769
BstNSI RCATGY 2 cut(s) 2080, 2393
BstSCI CCNGG 6 cut(s) 283, 316, 1588, 2136, 2558, 2767
BstSFI CTRYAG 2 cut(s) 1716, 2097
BstSLI GKGCMC 1 cut(s) 436
BstUI CGCG 1 cut(s) 831
BstV1I GCAGC 8 cut(s) 141, 883, 1468, 1730, 2542, 3010, 3636, 3639
BstV2I GAAGAC 6 cut(s) 147, 1421, 2376, 2706, 2734, 3636
BstX2I RGATCY 3 cut(s) 401, 634, 2260
BstXI CCANNNNNNTGG 3 cut(s) 2051, 3376, 3606
BstYI RGATCY 3 cut(s) 401, 634, 2260
BstZ17I GTATAC 1 cut(s) 1247
Bsu15I ATCGAT 1 cut(s) 2287
BsuI GTATCC 2 cut(s) 1772, 1861
BsuRI GGCC 6 cut(s) 777, 926, 1151, 1843, 3123, 3368
BsuTUI ATCGAT 1 cut(s) 2287
BtgI CCRYGG 2 cut(s) 2686, 3363
BtgZI GCGATG 1 cut(s) 812
BtrI CACGTC 1 cut(s) 1403
BtsIMutI CAGTG 6 cut(s) 249, 1127, 2339, 2513, 3258, 3642
BveI ACCTGC 2 cut(s) 1674, 2593
Cac8I GCNNGC 6 cut(s) 235, 1351, 2074, 2078, 3622, 3656
CaiI CAGNNNCTG 4 cut(s) 234, 673, 1481, 3353
CciI TCATGA 2 cut(s) 3115, 3444
CfoI GCGC 1 cut(s) 3495
Cfr10I RCCGGY 1 cut(s) 3620
Cfr13I GGNCC 5 cut(s) 313, 925, 1712, 1841, 3121
ClaI ATCGAT 1 cut(s) 2287
CseI GACGC 1 cut(s) 2700
DraI TTTAAA 3 cut(s) 84, 270, 1693
DriI GACNNNNNGTC 1 cut(s) 2221
EaeI YGGCCR 3 cut(s) 775, 1149, 3366
Eam1104I CTCTTC 4 cut(s) 585, 1089, 2637, 2770
Eam1105I GACNNNNNGTC 1 cut(s) 2221
EarI CTCTTC 4 cut(s) 585, 1089, 2637, 2770
Ecl136II GAGCTC 2 cut(s) 2697, 3274
Eco130I CCWWGG 5 cut(s) 427, 1290, 2686, 3363, 3605
Eco24I GRGCYC 3 cut(s) 2699, 2768, 3276
Eco31I GGTCTC 3 cut(s) 959, 2748, 3338
Eco32I GATATC 1 cut(s) 553
Eco47I GGWCC 2 cut(s) 313, 1712
Eco53kI GAGCTC 2 cut(s) 2697, 3274
Eco88I CYCGRG 3 cut(s) 543, 1238, 2351
EcoICRI GAGCTC 2 cut(s) 2697, 3274
EcoNI CCTNNNNNAGG 1 cut(s) 395
EcoRI GAATTC 2 cut(s) 903, 3070
EcoRII CCWGG 2 cut(s) 283, 2767
EcoRV GATATC 1 cut(s) 553
EcoT14I CCWWGG 5 cut(s) 427, 1290, 2686, 3363, 3605
EcoT22I ATGCAT 2 cut(s) 751, 2082
EcoT38I GRGCYC 3 cut(s) 2699, 2768, 3276
ErhI CCWWGG 5 cut(s) 427, 1290, 2686, 3363, 3605
FalI AAGNNNNNCTT 4 cut(s) 1194, 1226, 1369, 1401
FaqI GGGAC 5 cut(s) 170, 697, 994, 2048, 2633
FauI CCCGC 1 cut(s) 380
FauNDI CATATG 1 cut(s) 2946
FbaI TGATCA 1 cut(s) 3573
FblI GTMKAC 3 cut(s) 1159, 1246, 2248
Fnu4HI GCNGC 9 cut(s) 130, 872, 1482, 1681, 1719, 2556, 2999, 3625, 3628
FriOI GRGCYC 3 cut(s) 2699, 2768, 3276
Fsp4HI GCNGC 9 cut(s) 130, 872, 1482, 1681, 1719, 2556, 2999, 3625, 3628
FspBI CTAG 7 cut(s) 392, 1142, 1280, 1398, 1643, 1845, 3098
GlaI GCGC 1 cut(s) 3494
GluI GCNGC 9 cut(s) 130, 872, 1482, 1681, 1719, 2556, 2999, 3625, 3628
GsaI CCCAGC 3 cut(s) 2047, 2824, 3493
GsuI CTGGAG 2 cut(s) 1380, 2322
HaeIII GGCC 6 cut(s) 777, 926, 1151, 1843, 3123, 3368
HapII CCGG 7 cut(s) 318, 1589, 2137, 2268, 2480, 2560, 3621
HgaI GACGC 1 cut(s) 2700
HhaI GCGC 1 cut(s) 3495
Hin1I GRCGYC 2 cut(s) 3202, 3566
Hin6I GCGC 1 cut(s) 3493
HinP1I GCGC 1 cut(s) 3493
HincII GTYRAC 3 cut(s) 895, 1160, 2089
HindII GTYRAC 3 cut(s) 895, 1160, 2089
HindIII AAGCTT 3 cut(s) 1028, 1339, 1460
HpaI GTTAAC 2 cut(s) 895, 2089
HpaII CCGG 7 cut(s) 318, 1589, 2137, 2268, 2480, 2560, 3621
HphI GGTGA 7 cut(s) 827, 1640, 1649, 2981, 3071, 3299, 3525
HpyAV CCTTC 7 cut(s) 1093, 2503, 2623, 2656, 2894, 2960, 3161
HpyCH4IV ACGT 4 cut(s) 1402, 1734, 3202, 3566
HpyF10VI GCNNNNNNNGC 7 cut(s) 676, 887, 1202, 1727, 1923, 2147, 2763
HpySE526I ACGT 4 cut(s) 1402, 1734, 3202, 3566
Hsp92I GRCGYC 2 cut(s) 3202, 3566
HspAI GCGC 1 cut(s) 3493
Kpn2I TCCGGA 1 cut(s) 2479
KpnI GGTACC 1 cut(s) 413
KroI GCCGGC 1 cut(s) 3620
KroNI GCCGGC 1 cut(s) 3622
Ksp22I TGATCA 1 cut(s) 3573
KspAI GTTAAC 2 cut(s) 895, 2089
LmnI GCTCC 6 cut(s) 1051, 1361, 1931, 2562, 2599, 3031
Lsp1109I GCAGC 8 cut(s) 141, 883, 1468, 1730, 2542, 3010, 3636, 3639
LweI GCATC 7 cut(s) 199, 758, 1066, 1295, 1468, 2089, 2618
MaeI CTAG 7 cut(s) 392, 1142, 1280, 1398, 1643, 1845, 3098
MaeII ACGT 4 cut(s) 1402, 1734, 3202, 3566
MaeIII GTNAC 8 cut(s) 48, 628, 862, 1169, 2337, 2679, 3093, 3400
MfeI CAATTG 2 cut(s) 2625, 2736
MflI RGATCY 3 cut(s) 401, 634, 2260
MhlI GDGCHC 4 cut(s) 436, 2699, 2768, 3276
MlsI TGGCCA 3 cut(s) 777, 1151, 3368
MluNI TGGCCA 3 cut(s) 777, 1151, 3368
MlyI GAGTC 4 cut(s) 26, 1400, 3214, 3251
MmeI TCCRAC 1 cut(s) 489
Mox20I TGGCCA 3 cut(s) 777, 1151, 3368
Mph1103I ATGCAT 2 cut(s) 751, 2082
MroI TCCGGA 1 cut(s) 2479
MroNI GCCGGC 1 cut(s) 3620
MroXI GAANNNNTTC 5 cut(s) 1977, 2731, 2859, 3160, 3583
MscI TGGCCA 3 cut(s) 777, 1151, 3368
MslI CAYNNNNRTG 6 cut(s) 27, 57, 860, 2205, 2967, 3057
Msp20I TGGCCA 3 cut(s) 777, 1151, 3368
MspA1I CMGCKG 3 cut(s) 116, 644, 2473
MspI CCGG 7 cut(s) 318, 1589, 2137, 2268, 2480, 2560, 3621
MspR9I CCNGG 6 cut(s) 285, 318, 1590, 2138, 2560, 2769
MunI CAATTG 2 cut(s) 2625, 2736
Mva1269I GAATGC 4 cut(s) 2980, 3034, 3160, 3469
MvaI CCWGG 2 cut(s) 285, 2769
MvnI CGCG 1 cut(s) 831
MwoI GCNNNNNNNGC 7 cut(s) 676, 887, 1202, 1727, 1923, 2147, 2763
NaeI GCCGGC 1 cut(s) 3622
NciI CCSGG 4 cut(s) 318, 1590, 2138, 2560
NcoI CCATGG 2 cut(s) 2686, 3363
NdeI CATATG 1 cut(s) 2946
NgoMIV GCCGGC 1 cut(s) 3620
NlaIV GGNNCC 3 cut(s) 315, 411, 3361
NmuCI GTSAC 5 cut(s) 48, 628, 862, 2337, 3093
NsiI ATGCAT 2 cut(s) 751, 2082
NspI RCATGY 2 cut(s) 2080, 2393
OliI CACNNNNGTG 1 cut(s) 3057
PaeI GCATGC 1 cut(s) 2080
PaeR7I CTCGAG 1 cut(s) 1238
PagI TCATGA 2 cut(s) 3115, 3444
PaqCI CACCTGC 1 cut(s) 2593
PciI ACATGT 1 cut(s) 2389
PcsI WCGNNNNNNNCGW 2 cut(s) 2173, 2284
PctI GAATGC 4 cut(s) 2980, 3034, 3160, 3469
PdiI GCCGGC 1 cut(s) 3622
PdmI GAANNNNTTC 5 cut(s) 1977, 2731, 2859, 3160, 3583
PflMI CCANNNNNTGG 2 cut(s) 3143, 3654
PkrI GCNGC 9 cut(s) 131, 873, 1483, 1682, 1720, 2557, 3000, 3626, 3629
PleI GAGTC 4 cut(s) 25, 1399, 3214, 3250
PpsI GAGTC 4 cut(s) 25, 1399, 3214, 3250
PscI ACATGT 1 cut(s) 2389
Psp124BI GAGCTC 2 cut(s) 2699, 3276
Psp6I CCWGG 2 cut(s) 283, 2767
PspFI CCCAGC 3 cut(s) 2043, 2820, 3489
PspGI CCWGG 2 cut(s) 283, 2767
PspN4I GGNNCC 3 cut(s) 315, 411, 3361
PspPI GGNCC 5 cut(s) 313, 925, 1712, 1841, 3121
PspXI VCTCGAGB 1 cut(s) 1238
PstI CTGCAG 2 cut(s) 1720, 2101
PstNI CAGNNNCTG 4 cut(s) 234, 673, 1481, 3353
PsuI RGATCY 3 cut(s) 401, 634, 2260
PvuII CAGCTG 2 cut(s) 644, 2473
RseI CAYNNNNRTG 6 cut(s) 27, 57, 860, 2205, 2967, 3057
SacI GAGCTC 2 cut(s) 2699, 3276
SalI GTCGAC 1 cut(s) 1158
SatI GCNGC 9 cut(s) 130, 872, 1482, 1681, 1719, 2556, 2999, 3625, 3628
Sau96I GGNCC 5 cut(s) 313, 925, 1712, 1841, 3121
ScaI AGTACT 1 cut(s) 960
SchI GAGTC 4 cut(s) 26, 1400, 3214, 3251
ScrFI CCNGG 6 cut(s) 285, 318, 1590, 2138, 2560, 2769
SduI GDGCHC 4 cut(s) 436, 2699, 2768, 3276
SfaNI GCATC 7 cut(s) 199, 758, 1066, 1295, 1468, 2089, 2618
SfcI CTRYAG 2 cut(s) 1716, 2097
Sfr274I CTCGAG 1 cut(s) 1238
SinI GGWCC 2 cut(s) 313, 1712
SlaI CTCGAG 1 cut(s) 1238
SmiI ATTTAAAT 1 cut(s) 84
SmiMI CAYNNNNRTG 6 cut(s) 27, 57, 860, 2205, 2967, 3057
SmlI CTYRAG 7 cut(s) 624, 898, 962, 1031, 1064, 1238, 2418
SmoI CTYRAG 7 cut(s) 624, 898, 962, 1031, 1064, 1238, 2418
SphI GCATGC 1 cut(s) 2080
SsiI CCGC 4 cut(s) 116, 373, 1681, 1730
SspI AATATT 2 cut(s) 1555, 2122
SspMI CTAG 7 cut(s) 392, 1142, 1280, 1398, 1643, 1845, 3098
SstI GAGCTC 2 cut(s) 2699, 3276
StyD4I CCNGG 6 cut(s) 283, 316, 1588, 2136, 2558, 2767
StyI CCWWGG 5 cut(s) 427, 1290, 2686, 3363, 3605
SwaI ATTTAAAT 1 cut(s) 84
TaiI ACGT 4 cut(s) 1405, 1737, 3205, 3569
TaqII GACCGA 1 cut(s) 2856
TatI WGTACW 7 cut(s) 575, 652, 958, 1563, 2467, 2510, 3419
TauI GCSGC 1 cut(s) 1683
TscAI CASTG 6 cut(s) 256, 1134, 2346, 2520, 3265, 3642
TseFI GTSAC 5 cut(s) 48, 628, 862, 2337, 3093
TseI GCWGC 8 cut(s) 129, 871, 1481, 1718, 2555, 2998, 3624, 3627
Tsp45I GTSAC 5 cut(s) 48, 628, 862, 2337, 3093
TspRI CASTG 6 cut(s) 256, 1134, 2346, 2520, 3265, 3642
Van91I CCANNNNNTGG 2 cut(s) 3143, 3654
VneI GTGCAC 1 cut(s) 432
VpaK11BI GGWCC 2 cut(s) 313, 1712
XagI CCTNNNNNAGG 1 cut(s) 395
XapI RAATTY 9 cut(s) 79, 175, 264, 604, 903, 1439, 1694, 1996, 3070
XceI RCATGY 2 cut(s) 2080, 2393
XhoI CTCGAG 1 cut(s) 1238
XmiI GTMKAC 3 cut(s) 1159, 1246, 2248
XmnI GAANNNNTTC 5 cut(s) 1977, 2731, 2859, 3160, 3583
XspI CTAG 7 cut(s) 392, 1142, 1280, 1398, 1643, 1845, 3098
ZraI GACGTC 2 cut(s) 3203, 3567
ZrmI AGTACT 1 cut(s) 960
Zsp2I ATGCAT 2 cut(s) 751, 2082
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.