Rw5G025550
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
36563525 .. 36564371
847 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G025550.1

Sequence Viewer

Length: 480 bp
ATGGATGACTTTAGACATCATAAGCAGAGGTCAAAACTTGGAGGCGATGCAAGTCAAAATATTAATGAAGTCGATGCAAGTCAAAATTTTAATGAAGACTTTGAGATCTTGGGCTTTGGCTATGAAGATACTGGGGAGAGATTGAGCGACATATCTGATGGTGTTCTTTCAATGGGAACAGAAACCGATGGTTCAATGTCCAGTTCTTCTGTGGAGTTTACTCTTTTTCCTGAAGTTACAAAACCAACAGAACGCACAACTACTGAAACTCCAGAAGCCAAGAAATTAAACTCAAGCTCAGAATGCTCTAGGCGAGAAGACACCATCCCATCCGACTGTAAGCCAACACCTAAGTTGGTCGATACAAAAGCCACTCGTTCATCATTGGTTAGAAGCTCGTCAAAGGTTTTGCCGAGCCCTAGGAAAGCTACTGCTGGAAGCAGCACCTCGTCGGTGAAGTCTGGCAAACGATGGCAATAA

Protein Analysis

159

Amino Acids

17.37

Weight (kDa)

5.49

Isoelectric Point (pI)

63.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 85
AcuI CTGAAG 1 cut(s) 252
AgsI TTSAA 2 cut(s) 171, 195
AluBI AGCT 3 cut(s) 297, 396, 428
AluI AGCT 3 cut(s) 297, 396, 428
ApeKI GCWGC 1 cut(s) 441
ApoI RAATTY 1 cut(s) 85
AseI ATTAAT 1 cut(s) 63
AspA2I CCTAGG 1 cut(s) 419
AsuHPI GGTGA 1 cut(s) 466
AvrII CCTAGG 1 cut(s) 419
BanII GRGCYC 1 cut(s) 419
BbsI GAAGAC 2 cut(s) 102, 324
BbvI GCAGC 1 cut(s) 453
BccI CCATC 5 cut(s) 152, 182, 332, 337, 465
BfaI CTAG 2 cut(s) 309, 420
BglII AGATCT 1 cut(s) 105
BisI GCNGC 1 cut(s) 442
BlnI CCTAGG 1 cut(s) 419
BlsI GCNGC 1 cut(s) 443
BmrI ACTGGG 1 cut(s) 141
BmsI GCATC 2 cut(s) 37, 64
BmuI ACTGGG 1 cut(s) 141
BpiI GAAGAC 2 cut(s) 102, 324
BpmI CTGGAG 1 cut(s) 255
BpuEI CTTGAG 1 cut(s) 277
BsaJI CCNNGG 1 cut(s) 419
BsaXI ACNNNNNCTCC 2 cut(s) 253, 283
Bse1I ACTGG 2 cut(s) 136, 201
BseDI CCNNGG 1 cut(s) 419
BseGI GGATG 3 cut(s) 10, 324, 329
BseMII CTCAG 1 cut(s) 312
BseNI ACTGG 2 cut(s) 136, 201
BseXI GCAGC 1 cut(s) 453
BsmI GAATGC 1 cut(s) 308
Bsp1286I GDGCHC 1 cut(s) 419
Bsp143I GATC 1 cut(s) 105
BspCNI CTCAG 1 cut(s) 311
BsrI ACTGG 2 cut(s) 136, 201
BssECI CCNNGG 1 cut(s) 419
BssMI GATC 1 cut(s) 105
BssT1I CCWWGG 1 cut(s) 419
Bst4CI ACNGT 1 cut(s) 338
BstDEI CTNAG 2 cut(s) 298, 351
BstF5I GGATG 3 cut(s) 10, 324, 329
BstKTI GATC 1 cut(s) 108
BstMBI GATC 1 cut(s) 105
BstMWI GCNNNNNNNGC 1 cut(s) 303
BstV1I GCAGC 1 cut(s) 453
BstV2I GAAGAC 2 cut(s) 102, 324
BstX2I RGATCY 1 cut(s) 105
BstYI RGATCY 1 cut(s) 105
BtgZI GCGATG 1 cut(s) 60
BtsCI GGATG 3 cut(s) 10, 324, 329
CviJI RGCY 9 cut(s) 114, 120, 278, 297, 343, 371, 396, 417, 428
CviKI_1 RGCY 9 cut(s) 114, 120, 278, 297, 343, 371, 396, 417, 428
DdeI CTNAG 2 cut(s) 298, 351
DpnI GATC 1 cut(s) 107
DpnII GATC 1 cut(s) 105
Eco130I CCWWGG 1 cut(s) 419
Eco24I GRGCYC 1 cut(s) 419
Eco57I CTGAAG 1 cut(s) 252
EcoT14I CCWWGG 1 cut(s) 419
EcoT38I GRGCYC 1 cut(s) 419
ErhI CCWWGG 1 cut(s) 419
FaiI YATR 3 cut(s) 21, 123, 152
Fnu4HI GCNGC 1 cut(s) 442
FokI GGATG 3 cut(s) 17, 311, 316
FriOI GRGCYC 1 cut(s) 419
Fsp4HI GCNGC 1 cut(s) 442
FspBI CTAG 2 cut(s) 309, 420
GluI GCNGC 1 cut(s) 442
GsuI CTGGAG 1 cut(s) 255
HphI GGTGA 1 cut(s) 466
Hpy166II GTNNAC 1 cut(s) 219
Hpy188I TCNGA 3 cut(s) 157, 301, 334
Hpy188III TCNNGA 2 cut(s) 230, 272
Hpy8I GTNNAC 1 cut(s) 219
Hpy99I CGWCG 1 cut(s) 454
HpyCH4III ACNGT 1 cut(s) 338
HpyCH4V TGCA 2 cut(s) 50, 77
HpyF10VI GCNNNNNNNGC 1 cut(s) 303
HpyF3I CTNAG 2 cut(s) 298, 351
Kzo9I GATC 1 cut(s) 105
LpnPI CCDG 6 cut(s) 117, 214, 243, 285, 420, 447
Lsp1109I GCAGC 1 cut(s) 453
LweI GCATC 2 cut(s) 37, 64
MaeI CTAG 2 cut(s) 309, 420
MaeIII GTNAC 1 cut(s) 235
MalI GATC 1 cut(s) 107
MboI GATC 1 cut(s) 105
MboII GAAGA 4 cut(s) 107, 137, 198, 329
MflI RGATCY 1 cut(s) 105
MhlI GDGCHC 1 cut(s) 419
MluCI AATT 2 cut(s) 85, 284
MmeI TCCRAC 1 cut(s) 357
MnlI CCTC 3 cut(s) 21, 35, 457
MseI TTAA 3 cut(s) 63, 90, 287
Mva1269I GAATGC 1 cut(s) 308
MwoI GCNNNNNNNGC 1 cut(s) 303
NdeII GATC 1 cut(s) 105
NmeAIII GCCGAG 1 cut(s) 438
PctI GAATGC 1 cut(s) 308
PkrI GCNGC 1 cut(s) 443
PshBI ATTAAT 1 cut(s) 63
PsuI RGATCY 1 cut(s) 105
SaqAI TTAA 3 cut(s) 63, 90, 287
SatI GCNGC 1 cut(s) 442
Sau3AI GATC 1 cut(s) 105
SduI GDGCHC 1 cut(s) 419
SetI ASST 7 cut(s) 32, 299, 352, 398, 408, 430, 449
SfaNI GCATC 2 cut(s) 37, 64
SmlI CTYRAG 1 cut(s) 292
SmoI CTYRAG 1 cut(s) 292
Sse9I AATT 2 cut(s) 85, 284
SspI AATATT 1 cut(s) 61
SspMI CTAG 2 cut(s) 309, 420
StyI CCWWGG 1 cut(s) 419
TaaI ACNGT 1 cut(s) 338
TaqI TCGA 2 cut(s) 72, 360
TasI AATT 2 cut(s) 85, 284
Tru1I TTAA 3 cut(s) 63, 90, 287
Tru9I TTAA 3 cut(s) 63, 90, 287
TseI GCWGC 1 cut(s) 441
TspDTI ATGAA 4 cut(s) 81, 108, 138, 369
VspI ATTAAT 1 cut(s) 63
XapI RAATTY 1 cut(s) 85
XcmI CCANNNNNNNNNTGG 1 cut(s) 208
XmaJI CCTAGG 1 cut(s) 419
XspI CTAG 2 cut(s) 309, 420
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.