Rh7DG168200
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0004003
Physical Location & Seq
Forward (+)
15073110 .. 15075241
2132 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG168200.1

Sequence Viewer

Length: 1281 bp
ATGCATCTTGTTAACTCAACTGCTGATGTCCTAGAGTTGATGAATATTGGCTTGGCAAATAGGGCAGTCGGTGCTACCGCCCTAAACGAAAGAAGTAGCAGATCTCACAGTGTTCTGACTGTTCATGTTCGTGGCGTGGATTTGAAGACTGACACTGCTATCCGCGGTAGCCTACACCTAGTGGATCTTGCTGGCAGCGAACGAGTGGATCGCTCTGAAGCTACCGGAGATAGGCTTAGGGAGGCACAACATATAAACAAATCATTGTCAGCCCTTGGAGATGTAATCTTTGCTCTTGCGCAAAAGAATGCACATGTGCCATATAGAAATAGCAAATTAACTCAAGTGCTCCAGAGTTCTTTAGGGGGCCAAGCGAAGACGCTCATGTTTGTACAGCTTAATCCTGATACTCAATCATTCTCTGAAACTTTGAGTACACTGAAGTTTGCAGAGAGGGTTTCTGGTGTTGAATTAGGTGCTGCAAAAAGCAACAAGGAAGGAAGATATGTAAGAGAGCTTATGGACCAGGTGGCATCGTTTAAAGAGACGATTGCCAAGAAAGATGAGGAGATTGATCGATTGCTGAAGGCCAATAGTAATGGGGTGTACCGTGGCATGAGCCCACTAAGATCTGCGTCTTCCTCTCCAAGAAGATACTCGATTGGGAGTCCTCGACAGAGGAAAGCCTCAAGCATAGTTGATAAAGTGGCTCCATATAGGGATAGTTTGTCGGAGGCGGCATACGATAAGCATTCTGAAGTTAGTTCTCAGCTGTCAATGGATGACTTTGGACATCATAAGCAGAGGTCAAAACTTGGAGGCGATGCAAGTCAAAATATTAATGAAGGCGATGCAAGTCAAAATTTTAATGAAGACTTTGAGCTCTTGGGCTTTGGCGATGAAGATACTGGGGAGAGATTGAGCGACATATCTGATGGTGTTCTTTCAATGGGAACAGAAACCGATGGTTCAATGTCCAGTTCTGCTGTGGAGTTTACTCTTTTTCCTGAAGTTACAAAACCAACAGAACGCACAACTACTGAAACTCCAGAAGCCAAGAAAACTCAAGCTCAGAATGCTCTAGGCGAGAAGACACCATCCCATCCGACTGTAAGGTTTGCACCAACATCTAAACTTCCAAAGCCAACACCGAAGTTGGTCGATACAAAAGCCACTCGTTCATCATTGGTTAGAAGCTCGTCAAAGGTTTTGCCGAGTCCTAGGAAACCTACTGCTGGAAGCAGCACCTCGTCGGTGAAGTCTGGCAAACGATGGCAATAA

Protein Analysis

426

Amino Acids

46.22

Weight (kDa)

9.22

Isoelectric Point (pI)

42.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 3 - 154 2.3e-59 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 300
AccII CGCG 1 cut(s) 165
AciI CCGC 4 cut(s) 78, 163, 165, 737
AclWI GGATC 2 cut(s) 192, 216
AcsI RAATTY 1 cut(s) 862
AcuI CTGAAG 5 cut(s) 237, 461, 605, 777, 1029
AdeI CACNNNGTG 1 cut(s) 181
AfaI GTAC 3 cut(s) 393, 436, 608
AfiI CCNNNNNNNGG 2 cut(s) 231, 1235
AflIII ACRYGT 1 cut(s) 313
AgsI TTSAA 4 cut(s) 145, 470, 948, 972
AjnI CCWGG 1 cut(s) 525
AjuI GAANNNNNNNTTGG 2 cut(s) 35, 67
AluBI AGCT 7 cut(s) 221, 397, 517, 772, 883, 1070, 1197
AluI AGCT 7 cut(s) 221, 397, 517, 772, 883, 1070, 1197
Alw21I GWGCWC 2 cut(s) 351, 885
Alw26I GTCTC 1 cut(s) 539
AlwI GGATC 2 cut(s) 192, 216
AoxI GGCC 2 cut(s) 367, 588
ApeKI GCWGC 3 cut(s) 195, 479, 1242
ApoI RAATTY 1 cut(s) 862
AseI ATTAAT 1 cut(s) 840
AspA2I CCTAGG 1 cut(s) 1220
AspLEI GCGC 1 cut(s) 301
AspS9I GGNCC 2 cut(s) 367, 523
AsuHPI GGTGA 1 cut(s) 1267
AvaII GGWCC 1 cut(s) 523
AvrII CCTAGG 1 cut(s) 1220
BanII GRGCYC 2 cut(s) 623, 885
BbsI GAAGAC 5 cut(s) 152, 383, 630, 879, 1097
Bbv12I GWGCWC 2 cut(s) 351, 885
BbvI GCAGC 3 cut(s) 207, 466, 1254
BccI CCATC 5 cut(s) 929, 959, 1105, 1110, 1266
BciT130I CCWGG 1 cut(s) 527
BcoDI GTCTC 1 cut(s) 539
BfaI CTAG 4 cut(s) 32, 179, 1082, 1221
BglII AGATCT 2 cut(s) 101, 629
BisI GCNGC 4 cut(s) 196, 480, 738, 1243
BlnI CCTAGG 1 cut(s) 1220
BlsI GCNGC 4 cut(s) 197, 481, 739, 1244
Bme1390I CCNGG 1 cut(s) 527
Bme18I GGWCC 1 cut(s) 523
BmgT120I GGNCC 2 cut(s) 367, 523
BmiI GGNNCC 2 cut(s) 368, 711
BmrFI CCNGG 1 cut(s) 527
BmrI ACTGGG 1 cut(s) 918
BmsI GCATC 4 cut(s) 13, 542, 814, 841
BmuI ACTGGG 1 cut(s) 918
BpiI GAAGAC 5 cut(s) 152, 383, 630, 879, 1097
BpmI CTGGAG 2 cut(s) 335, 1032
Bpu10I CCTNAGC 1 cut(s) 236
BpuEI CTTGAG 3 cut(s) 327, 673, 1050
Bsa29I ATCGAT 1 cut(s) 577
BsaJI CCNNGG 4 cut(s) 163, 274, 610, 1220
BsaWI WCCGGW 1 cut(s) 224
BsaXI ACNNNNNCTCC 2 cut(s) 1030, 1060
Bsc4I CCNNNNNNNGG 2 cut(s) 231, 1235
Bse1I ACTGG 2 cut(s) 913, 978
BseBI CCWGG 1 cut(s) 527
BseCI ATCGAT 1 cut(s) 577
BseDI CCNNGG 4 cut(s) 163, 274, 610, 1220
BseGI GGATG 3 cut(s) 787, 1097, 1102
BseLI CCNNNNNNNGG 2 cut(s) 231, 1235
BseMII CTCAG 2 cut(s) 782, 1085
BseNI ACTGG 2 cut(s) 913, 978
BseRI GAGGAG 1 cut(s) 581
BseXI GCAGC 3 cut(s) 207, 466, 1254
Bsh1236I CGCG 1 cut(s) 165
BshFI GGCC 2 cut(s) 369, 590
BshVI ATCGAT 1 cut(s) 577
BsiHKAI GWGCWC 2 cut(s) 351, 885
BsiSI CCGG 1 cut(s) 225
BslI CCNNNNNNNGG 2 cut(s) 231, 1235
BsmAI GTCTC 1 cut(s) 539
BsmBI CGTCTC 1 cut(s) 539
BsmI GAATGC 3 cut(s) 313, 751, 1081
BsnI GGCC 2 cut(s) 369, 590
Bsp1286I GDGCHC 3 cut(s) 351, 623, 885
Bsp1407I TGTACA 1 cut(s) 391
Bsp143I GATC 5 cut(s) 101, 184, 208, 574, 629
BspACI CCGC 4 cut(s) 78, 163, 165, 737
BspANI GGCC 2 cut(s) 369, 590
BspCNI CTCAG 2 cut(s) 781, 1084
BspDI ATCGAT 1 cut(s) 577
BspFNI CGCG 1 cut(s) 165
BspLI GGNNCC 2 cut(s) 368, 711
BspPI GGATC 2 cut(s) 192, 216
BsrGI TGTACA 1 cut(s) 391
BsrI ACTGG 2 cut(s) 913, 978
BssECI CCNNGG 4 cut(s) 163, 274, 610, 1220
BssMI GATC 5 cut(s) 101, 184, 208, 574, 629
BssT1I CCWWGG 2 cut(s) 274, 1220
Bst2UI CCWGG 1 cut(s) 527
Bst4CI ACNGT 4 cut(s) 110, 121, 611, 1111
BstAPI GCANNNNNTGC 1 cut(s) 71
BstAUI TGTACA 1 cut(s) 391
BstC8I GCNNGC 1 cut(s) 193
BstDEI CTNAG 4 cut(s) 236, 626, 768, 1071
BstDSI CCRYGG 2 cut(s) 163, 610
BstF5I GGATG 3 cut(s) 787, 1097, 1102
BstFNI CGCG 1 cut(s) 165
BstHHI GCGC 1 cut(s) 301
BstKTI GATC 5 cut(s) 104, 187, 211, 577, 632
BstMAI GTCTC 1 cut(s) 539
BstMBI GATC 5 cut(s) 101, 184, 208, 574, 629
BstMWI GCNNNNNNNGC 3 cut(s) 62, 71, 1076
BstNI CCWGG 1 cut(s) 527
BstNSI RCATGY 1 cut(s) 317
BstSCI CCNGG 1 cut(s) 525
BstUI CGCG 1 cut(s) 165
BstV1I GCAGC 3 cut(s) 207, 466, 1254
BstV2I GAAGAC 5 cut(s) 152, 383, 630, 879, 1097
BstX2I RGATCY 3 cut(s) 101, 184, 629
BstYI RGATCY 3 cut(s) 101, 184, 629
Bsu15I ATCGAT 1 cut(s) 577
BsuRI GGCC 2 cut(s) 369, 590
BsuTUI ATCGAT 1 cut(s) 577
BtgI CCRYGG 2 cut(s) 163, 610
BtgZI GCGATG 3 cut(s) 837, 864, 912
BtsCI GGATG 3 cut(s) 787, 1097, 1102
BtsI GCAGTG 1 cut(s) 153
BtsIMutI CAGTG 3 cut(s) 115, 153, 437
Cac8I GCNNGC 1 cut(s) 193
CfoI GCGC 1 cut(s) 301
Cfr13I GGNCC 2 cut(s) 367, 523
Cfr42I CCGCGG 1 cut(s) 166
ClaI ATCGAT 1 cut(s) 577
CseI GACGC 2 cut(s) 388, 624
CsiI ACCWGGT 1 cut(s) 525
Csp6I GTAC 3 cut(s) 392, 435, 607
CviAII CATG 4 cut(s) 125, 314, 385, 616
CviQI GTAC 3 cut(s) 392, 435, 607
DdeI CTNAG 4 cut(s) 236, 626, 768, 1071
DpnI GATC 5 cut(s) 103, 186, 210, 576, 631
DpnII GATC 5 cut(s) 101, 184, 208, 574, 629
DraI TTTAAA 1 cut(s) 541
DraIII CACNNNGTG 1 cut(s) 181
Ecl136II GAGCTC 1 cut(s) 883
Eco130I CCWWGG 2 cut(s) 274, 1220
Eco24I GRGCYC 2 cut(s) 623, 885
Eco47I GGWCC 1 cut(s) 523
Eco53kI GAGCTC 1 cut(s) 883
Eco57I CTGAAG 5 cut(s) 237, 461, 605, 777, 1029
EcoICRI GAGCTC 1 cut(s) 883
EcoRII CCWGG 1 cut(s) 525
EcoT14I CCWWGG 2 cut(s) 274, 1220
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 2 cut(s) 623, 885
ErhI CCWWGG 2 cut(s) 274, 1220
Esp3I CGTCTC 1 cut(s) 539
FaeI CATG 4 cut(s) 128, 317, 388, 619
FatI CATG 4 cut(s) 124, 313, 384, 615
Fnu4HI GCNGC 4 cut(s) 196, 480, 738, 1243
FokI GGATG 3 cut(s) 794, 1084, 1089
FriOI GRGCYC 2 cut(s) 623, 885
Fsp4HI GCNGC 4 cut(s) 196, 480, 738, 1243
FspBI CTAG 4 cut(s) 32, 179, 1082, 1221
FspI TGCGCA 1 cut(s) 300
GlaI GCGC 1 cut(s) 300
GluI GCNGC 4 cut(s) 196, 480, 738, 1243
GsuI CTGGAG 2 cut(s) 335, 1032
HaeIII GGCC 2 cut(s) 369, 590
HapII CCGG 1 cut(s) 225
HgaI GACGC 2 cut(s) 388, 624
HhaI GCGC 1 cut(s) 301
Hin1II CATG 4 cut(s) 128, 317, 388, 619
Hin6I GCGC 1 cut(s) 299
HinP1I GCGC 1 cut(s) 299
HincII GTYRAC 1 cut(s) 13
HindII GTYRAC 1 cut(s) 13
HinfI GANTC 2 cut(s) 667, 1216
HpaI GTTAAC 1 cut(s) 13
HpaII CCGG 1 cut(s) 225
HphI GGTGA 1 cut(s) 1267
Hpy166II GTNNAC 4 cut(s) 13, 437, 607, 996
Hpy188I TCNGA 8 cut(s) 117, 217, 424, 733, 757, 934, 1074, 1107
Hpy188III TCNNGA 4 cut(s) 352, 404, 1007, 1049
Hpy8I GTNNAC 4 cut(s) 13, 437, 607, 996
Hpy99I CGWCG 1 cut(s) 1255
HpyAV CCTTC 3 cut(s) 491, 580, 839
HpyCH4III ACNGT 4 cut(s) 110, 121, 611, 1111
HpyCH4V TGCA 7 cut(s) 4, 311, 449, 482, 827, 854, 1121
HpyF10VI GCNNNNNNNGC 3 cut(s) 62, 71, 1076
HpyF3I CTNAG 4 cut(s) 236, 626, 768, 1071
Hsp92II CATG 4 cut(s) 128, 317, 388, 619
HspAI GCGC 1 cut(s) 299
KspAI GTTAAC 1 cut(s) 13
KspI CCGCGG 1 cut(s) 166
Kzo9I GATC 5 cut(s) 101, 184, 208, 574, 629
LmnI GCTCC 2 cut(s) 354, 715
Lsp1109I GCAGC 3 cut(s) 207, 466, 1254
LweI GCATC 4 cut(s) 13, 542, 814, 841
MabI ACCWGGT 1 cut(s) 525
MaeI CTAG 4 cut(s) 32, 179, 1082, 1221
MaeIII GTNAC 1 cut(s) 1012
MalI GATC 5 cut(s) 103, 186, 210, 576, 631
MboI GATC 5 cut(s) 101, 184, 208, 574, 629
MboII GAAGA 8 cut(s) 157, 388, 513, 630, 663, 884, 914, 1102
MflI RGATCY 3 cut(s) 101, 184, 629
MhlI GDGCHC 3 cut(s) 351, 623, 885
MluCI AATT 3 cut(s) 335, 470, 862
MlyI GAGTC 2 cut(s) 676, 1225
MmeI TCCRAC 2 cut(s) 711, 1130
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 6 cut(s) 12, 338, 399, 540, 840, 867
MslI CAYNNNNRTG 1 cut(s) 129
MspA1I CMGCKG 2 cut(s) 165, 772
MspI CCGG 1 cut(s) 225
MspR9I CCNGG 1 cut(s) 527
Mva1269I GAATGC 3 cut(s) 313, 751, 1081
MvaI CCWGG 1 cut(s) 527
MvnI CGCG 1 cut(s) 165
MwoI GCNNNNNNNGC 3 cut(s) 62, 71, 1076
NdeII GATC 5 cut(s) 101, 184, 208, 574, 629
NlaIII CATG 4 cut(s) 128, 317, 388, 619
NlaIV GGNNCC 2 cut(s) 368, 711
NmeAIII GCCGAG 1 cut(s) 1239
NsbI TGCGCA 1 cut(s) 300
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 317
PciI ACATGT 1 cut(s) 313
PctI GAATGC 3 cut(s) 313, 751, 1081
PkrI GCNGC 4 cut(s) 197, 481, 739, 1244
PleI GAGTC 2 cut(s) 675, 1224
PpsI GAGTC 2 cut(s) 675, 1224
PscI ACATGT 1 cut(s) 313
PshBI ATTAAT 1 cut(s) 840
Psp124BI GAGCTC 1 cut(s) 885
Psp6I CCWGG 1 cut(s) 525
PspGI CCWGG 1 cut(s) 525
PspN4I GGNNCC 2 cut(s) 368, 711
PspPI GGNCC 2 cut(s) 367, 523
PsuI RGATCY 3 cut(s) 101, 184, 629
PvuII CAGCTG 1 cut(s) 772
RsaI GTAC 3 cut(s) 393, 436, 608
RsaNI GTAC 3 cut(s) 392, 435, 607
RseI CAYNNNNRTG 1 cut(s) 129
SacI GAGCTC 1 cut(s) 885
SacII CCGCGG 1 cut(s) 166
SaqAI TTAA 6 cut(s) 12, 338, 399, 540, 840, 867
SatI GCNGC 4 cut(s) 196, 480, 738, 1243
Sau3AI GATC 5 cut(s) 101, 184, 208, 574, 629
Sau96I GGNCC 2 cut(s) 367, 523
SchI GAGTC 2 cut(s) 676, 1225
ScrFI CCNGG 1 cut(s) 527
SduI GDGCHC 3 cut(s) 351, 623, 885
SexAI ACCWGGT 1 cut(s) 525
SfaNI GCATC 4 cut(s) 13, 542, 814, 841
Sfr303I CCGCGG 1 cut(s) 166
SgrBI CCGCGG 1 cut(s) 166
SinI GGWCC 1 cut(s) 523
SmiMI CAYNNNNRTG 1 cut(s) 129
SmlI CTYRAG 3 cut(s) 342, 688, 1065
SmoI CTYRAG 3 cut(s) 342, 688, 1065
Sse9I AATT 3 cut(s) 335, 470, 862
SsiI CCGC 4 cut(s) 78, 163, 165, 737
SspI AATATT 2 cut(s) 46, 838
SspMI CTAG 4 cut(s) 32, 179, 1082, 1221
SstI GAGCTC 1 cut(s) 885
StyD4I CCNGG 1 cut(s) 525
StyI CCWWGG 2 cut(s) 274, 1220
TaaI ACNGT 4 cut(s) 110, 121, 611, 1111
TaqI TCGA 4 cut(s) 577, 659, 673, 1161
TasI AATT 3 cut(s) 335, 470, 862
TatI WGTACW 2 cut(s) 391, 434
TauI GCSGC 1 cut(s) 740
Tru1I TTAA 6 cut(s) 12, 338, 399, 540, 840, 867
Tru9I TTAA 6 cut(s) 12, 338, 399, 540, 840, 867
TscAI CASTG 3 cut(s) 115, 160, 444
TseI GCWGC 3 cut(s) 195, 479, 1242
TspDTI ATGAA 6 cut(s) 56, 113, 858, 885, 915, 1170
TspRI CASTG 3 cut(s) 115, 160, 444
VpaK11BI GGWCC 1 cut(s) 523
VspI ATTAAT 1 cut(s) 840
XapI RAATTY 1 cut(s) 862
XceI RCATGY 1 cut(s) 317
XcmI CCANNNNNNNNNTGG 1 cut(s) 985
XmaJI CCTAGG 1 cut(s) 1220
XspI CTAG 4 cut(s) 32, 179, 1082, 1221
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.