pycom06g08010
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Reverse (-)
13058479 .. 13063982
5504 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g08010.11

Sequence Viewer

Length: 1923 bp
ATGAACACTCAGTTAGAGTCACACAAAGATGAGAATGGGGGGTCAAAGTCACACATAGATGAAAGGAAGGGGTTTGAAAATTTAAATGGGACTTCAACTGCAAATGCTGAACCAGTGGAAAATTTCGGCAGCACAATTGAAGACAACCAGATATTATCGCTGGTTGAGTGGTTGAATTTTATTGTTCCTTATTTAAGATTGCCATTGGATGCTTCCGAGGAGGAACTCAGAGCCTGCTTGGTTGATGGCACTGTTTTATGCAGAATTTTAAATAAGTTGTGTCCTGGTTCAGTTGAAATGGGATCTCTTGTGCCAGTGTTGCAATGCCTTGGTGCACTTAAATCTTCTTTTGATTTTGGTTTTTGGGGAGAAAACAGTAAACACCTAACAAGGACAGAAAGTGATTTGTTGGGGGTAGAATCTTTAGAGGGAATTGATCGTTCCCTAGGGGATATCTCAACATTTGGACAACAATCTACTCAAAATAGACAAGATACTCAAGGAAATTCAAGTGACTCAACATCTCAAGTGACAGATCCATCAGCTGATTTAGTACATCATATTGGACAGCAACTGAAGCAGGGGAGTTTTGTTGATTTCTCAGATGCGAAGATTTTGGAATCCGTCAAATCAAGCAGTTTAGATAATGCATCTACTCGAGCACTTTTCAATGTTGGGAATAAGATTCTGGATGACAGTATCGACAGAAACAATGGTGATGTACCTCATTGTGTAGCATATCTTCTAAGAAAAGTCATGCAAGTGATTGAACAGAGATTCGCAAATCAGGCAGTGAACTTGAGAATTCAAAACAACATATATAAGGCCCGTGAGGAGAAGTTTCTATTGAAAATAAAAGTACTTGAAACCCTTGCATCCGGGACTACCGAAGAAAATGAGGTTGTTCTGAAACAGCTTCAGAATATCAAGCTTGAGAAGTTTGATATAGAGGAGCAGAAAAAGCTTGAGGAGGAAGATGCGGTGCGATTAAAGGAAGAGAAGTATCACAGGGATTCAGAGATTTCAACACTGAAACAAGAACTAGAATTGGCCACAAGTCGACATGAAAGTTACTGCCAGAAGTTAGAGGCAAATGCAAAAGAAGCTAAACTTCAACTGGAAAGGAAGTTAAAAGAACTTGAGAGCATACTAACAGATTCAAAGCAGAACCAGAAAGAACTAGAGGCATCTTTGGAAAATGAATCAGGGAGATGGAAAAATAGAGAACGCACATATCAAAGTTTTGTAACTTACCAATCTGGAGCTTTGCAGGAATTAAGTGGCGCTTTGGAGTCCACTAGACATGAAATCTTGAAGACAAAAAGAAGTTACTCTGAAGATTTTAATTACTTGGGGCATCTCTTCACAATTTATGCTTTTCATATTGAAGGTTTGAAGCTTAAAGGACTGACAGATGCTGCTGAAAAGTATCATGCTGTTCTTGATGAAAATCGGAAATTGTATAATGAGGTTCAGGATTTGAAAGTGTACTGTCGAATAAGACCATTCCTTCCGGGTCAAAGCCAAAAGCAAACCACCATAGAATATGTTGGTGAAAATGGTGATCTAGTTATTGCAAATCCCTCTAAACAAGGAAAAGACAGTCGCAGGCTGTTTAAATTTAACAAAGTATTTGGTCCTGCAGCTACACAAGAGGACGTATTTTTAGACACCCAACCATTGATTCGTTCTGTCCTTGATGGATACAATGTTTGTATATTTGCCTATGGTCAAACTGGTTCAGGAAAGACATATACCATGACTGGGCCTAGTGTATCATCGACAGATGACTGGGGTGTCAACTATCGAGCATTAAATGATCGATTCCAAATATCTCAGAGCAGGGAACACTCCATAGCTTATGAAGTTGGTGTTCAAATGGTAGAGATATATAATGAACAAGTTCGATCTACTCTCAAGTGA

Protein Analysis

641

Amino Acids

72.39

Weight (kDa)

5.31

Isoelectric Point (pI)

47.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1796
AccI GTMKAC 1 cut(s) 1060
AciI CCGC 1 cut(s) 980
AclWI GGATC 2 cut(s) 310, 530
AcoI YGGCCR 1 cut(s) 1050
AcsI RAATTY 7 cut(s) 79, 121, 175, 264, 505, 804, 1619
AcuI CTGAAG 3 cut(s) 596, 902, 1356
AfaI GTAC 4 cut(s) 555, 723, 861, 1490
AfiI CCNNNNNNNGG 1 cut(s) 1764
AjnI CCWGG 1 cut(s) 283
AjuI GAANNNNNNNTTGG 2 cut(s) 1668, 1700
AluBI AGCT 9 cut(s) 545, 916, 931, 964, 1106, 1265, 1399, 1646, 1859
AluI AGCT 9 cut(s) 545, 916, 931, 964, 1106, 1265, 1399, 1646, 1859
Alw21I GWGCWC 2 cut(s) 337, 664
Alw44I GTGCAC 1 cut(s) 333
AlwI GGATC 2 cut(s) 310, 530
AlwNI CAGNNNCTG 3 cut(s) 234, 574, 1418
Ama87I CYCGRG 1 cut(s) 657
AoxI GGCC 3 cut(s) 825, 1050, 1766
ApaLI GTGCAC 1 cut(s) 333
ApeKI GCWGC 3 cut(s) 129, 1418, 1643
ApoI RAATTY 7 cut(s) 79, 121, 175, 264, 505, 804, 1619
Asp700I GAANNNNTTC 1 cut(s) 1902
AspA2I CCTAGG 1 cut(s) 445
AspLEI GCGC 1 cut(s) 1286
AspS9I GGNCC 3 cut(s) 826, 1637, 1766
AsuC2I CCSGG 2 cut(s) 880, 1515
AsuHPI GGTGA 3 cut(s) 728, 1565, 1574
AvaI CYCGRG 1 cut(s) 657
AvaII GGWCC 1 cut(s) 1637
AvrII CCTAGG 1 cut(s) 445
BaeGI GKGCMC 1 cut(s) 337
BalI TGGCCA 1 cut(s) 1052
BarI GAAGNNNNNNTAC 2 cut(s) 726, 758
BbsI GAAGAC 2 cut(s) 147, 1322
Bbv12I GWGCWC 2 cut(s) 337, 664
BbvI GCAGC 3 cut(s) 141, 1405, 1655
BccI CCATC 4 cut(s) 239, 547, 1206, 1694
BciT130I CCWGG 1 cut(s) 285
BciVI GTATCC 1 cut(s) 1697
BcnI CCSGG 2 cut(s) 880, 1515
BfaI CTAG 6 cut(s) 446, 1043, 1181, 1299, 1568, 1770
BfmI CTRYAG 1 cut(s) 1641
BfoI RGCGCY 1 cut(s) 1287
BfuI GTATCC 1 cut(s) 1697
BisI GCNGC 3 cut(s) 130, 1419, 1644
BlnI CCTAGG 1 cut(s) 445
BlsI GCNGC 3 cut(s) 131, 1420, 1645
BmcAI AGTACT 1 cut(s) 861
Bme1390I CCNGG 3 cut(s) 285, 880, 1515
Bme18I GGWCC 1 cut(s) 1637
BmeT110I CYCGRG 1 cut(s) 657
BmgT120I GGNCC 3 cut(s) 826, 1637, 1766
BmrFI CCNGG 3 cut(s) 285, 880, 1515
BmrI ACTGGG 2 cut(s) 1773, 1801
BmsI GCATC 8 cut(s) 199, 595, 659, 884, 967, 1196, 1366, 1405
BmuI ACTGGG 2 cut(s) 1773, 1801
BpiI GAAGAC 2 cut(s) 147, 1322
BpmI CTGGAG 1 cut(s) 1281
BpuEI CTTGAG 7 cut(s) 483, 510, 820, 953, 986, 1160, 1901
BpuMI CCSGG 2 cut(s) 880, 1515
Bsa29I ATCGAT 1 cut(s) 1822
BsaBI GATNNNNATC 1 cut(s) 1449
BsaJI CCNNGG 3 cut(s) 216, 328, 445
Bsc4I CCNNNNNNNGG 1 cut(s) 1764
Bse1I ACTGG 6 cut(s) 113, 314, 1122, 1741, 1768, 1796
Bse3DI GCAATG 1 cut(s) 329
Bse8I GATNNNNATC 1 cut(s) 1449
BseBI CCWGG 1 cut(s) 285
BseCI ATCGAT 1 cut(s) 1822
BseDI CCNNGG 3 cut(s) 216, 328, 445
BseGI GGATG 3 cut(s) 214, 697, 875
BseJI GATNNNNATC 1 cut(s) 1449
BseLI CCNNNNNNNGG 1 cut(s) 1764
BseMI GCAATG 1 cut(s) 329
BseMII CTCAG 4 cut(s) 23, 241, 615, 1850
BseNI ACTGG 6 cut(s) 113, 314, 1122, 1741, 1768, 1796
BseRI GAGGAG 4 cut(s) 233, 848, 965, 983
BseSI GKGCMC 1 cut(s) 337
BseXI GCAGC 3 cut(s) 141, 1405, 1655
BshFI GGCC 3 cut(s) 827, 1052, 1768
BshVI ATCGAT 1 cut(s) 1822
BsiHKAI GWGCWC 2 cut(s) 337, 664
BsiHKCI CYCGRG 1 cut(s) 657
BsiSI CCGG 2 cut(s) 879, 1514
BslFI GGGAC 2 cut(s) 103, 895
BslI CCNNNNNNNGG 1 cut(s) 1764
BsmFI GGGAC 2 cut(s) 103, 895
BsnI GGCC 3 cut(s) 827, 1052, 1768
BsoBI CYCGRG 1 cut(s) 657
Bsp1286I GDGCHC 2 cut(s) 337, 664
Bsp143I GATC 6 cut(s) 302, 436, 535, 1564, 1819, 1907
BspACI CCGC 1 cut(s) 980
BspANI GGCC 3 cut(s) 827, 1052, 1768
BspCNI CTCAG 4 cut(s) 22, 240, 614, 1849
BspDI ATCGAT 1 cut(s) 1822
BspMAI CTGCAG 1 cut(s) 1645
BspPI GGATC 2 cut(s) 310, 530
BsrDI GCAATG 1 cut(s) 329
BsrI ACTGG 6 cut(s) 113, 314, 1122, 1741, 1768, 1796
BssECI CCNNGG 3 cut(s) 216, 328, 445
BssMI GATC 6 cut(s) 302, 436, 535, 1564, 1819, 1907
BssT1I CCWWGG 2 cut(s) 328, 445
Bst2UI CCWGG 1 cut(s) 285
Bst4CI ACNGT 5 cut(s) 253, 377, 698, 1493, 1604
Bst6I CTCTTC 2 cut(s) 990, 1367
BstC8I GCNNGC 2 cut(s) 235, 1610
BstDEI CTNAG 5 cut(s) 9, 227, 601, 746, 1836
BstF5I GGATG 3 cut(s) 214, 697, 875
BstH2I RGCGCY 1 cut(s) 1287
BstHHI GCGC 1 cut(s) 1286
BstKTI GATC 6 cut(s) 305, 439, 538, 1567, 1822, 1910
BstMBI GATC 6 cut(s) 302, 436, 535, 1564, 1819, 1907
BstMWI GCNNNNNNNGC 5 cut(s) 319, 577, 788, 961, 1103
BstNI CCWGG 1 cut(s) 285
BstSCI CCNGG 3 cut(s) 283, 878, 1513
BstSFI CTRYAG 1 cut(s) 1641
BstSLI GKGCMC 1 cut(s) 337
BstV1I GCAGC 3 cut(s) 141, 1405, 1655
BstV2I GAAGAC 2 cut(s) 147, 1322
BstX2I RGATCY 2 cut(s) 302, 535
BstYI RGATCY 2 cut(s) 302, 535
Bsu15I ATCGAT 1 cut(s) 1822
BsuI GTATCC 1 cut(s) 1697
BsuRI GGCC 3 cut(s) 827, 1052, 1768
BsuTUI ATCGAT 1 cut(s) 1822
BtsCI GGATG 3 cut(s) 214, 697, 875
BtsI GCAGTG 1 cut(s) 798
BtsIMutI CAGTG 5 cut(s) 120, 249, 321, 798, 1028
Cac8I GCNNGC 2 cut(s) 235, 1610
CaiI CAGNNNCTG 3 cut(s) 234, 574, 1418
CfoI GCGC 1 cut(s) 1286
Cfr13I GGNCC 3 cut(s) 826, 1637, 1766
ClaI ATCGAT 1 cut(s) 1822
Csp6I GTAC 4 cut(s) 554, 722, 860, 1489
CviAII CATG 5 cut(s) 757, 1064, 1304, 1433, 1759
CviQI GTAC 4 cut(s) 554, 722, 860, 1489
DdeI CTNAG 5 cut(s) 9, 227, 601, 746, 1836
DpnI GATC 6 cut(s) 304, 438, 537, 1566, 1821, 1909
DpnII GATC 6 cut(s) 302, 436, 535, 1564, 1819, 1907
DraI TTTAAA 3 cut(s) 84, 270, 1618
DrdI GACNNNNNNGTC 1 cut(s) 1796
DseDI GACNNNNNNGTC 1 cut(s) 1796
EaeI YGGCCR 1 cut(s) 1050
Eam1104I CTCTTC 2 cut(s) 990, 1367
EarI CTCTTC 2 cut(s) 990, 1367
Eco130I CCWWGG 2 cut(s) 328, 445
Eco32I GATATC 1 cut(s) 454
Eco47I GGWCC 1 cut(s) 1637
Eco57I CTGAAG 3 cut(s) 596, 902, 1356
Eco88I CYCGRG 1 cut(s) 657
EcoRI GAATTC 1 cut(s) 804
EcoRII CCWGG 1 cut(s) 283
EcoRV GATATC 1 cut(s) 454
EcoT14I CCWWGG 2 cut(s) 328, 445
EcoT22I ATGCAT 1 cut(s) 652
ErhI CCWWGG 2 cut(s) 328, 445
FaeI CATG 5 cut(s) 760, 1067, 1307, 1436, 1762
FalI AAGNNNNNCTT 4 cut(s) 1095, 1127, 1270, 1302
FaqI GGGAC 2 cut(s) 103, 895
FatI CATG 5 cut(s) 756, 1063, 1303, 1432, 1758
FblI GTMKAC 1 cut(s) 1060
Fnu4HI GCNGC 3 cut(s) 130, 1419, 1644
FokI GGATG 3 cut(s) 221, 704, 862
Fsp4HI GCNGC 3 cut(s) 130, 1419, 1644
FspBI CTAG 6 cut(s) 446, 1043, 1181, 1299, 1568, 1770
GlaI GCGC 1 cut(s) 1285
GluI GCNGC 3 cut(s) 130, 1419, 1644
GsuI CTGGAG 1 cut(s) 1281
HaeII RGCGCY 1 cut(s) 1287
HaeIII GGCC 3 cut(s) 827, 1052, 1768
HapII CCGG 2 cut(s) 879, 1514
HhaI GCGC 1 cut(s) 1286
Hin1II CATG 5 cut(s) 760, 1067, 1307, 1436, 1762
Hin6I GCGC 1 cut(s) 1284
HinP1I GCGC 1 cut(s) 1284
HincII GTYRAC 2 cut(s) 1061, 1801
HindII GTYRAC 2 cut(s) 1061, 1801
HindIII AAGCTT 3 cut(s) 929, 962, 1397
HpaII CCGG 2 cut(s) 879, 1514
HphI GGTGA 3 cut(s) 728, 1565, 1574
Hpy166II GTNNAC 7 cut(s) 335, 380, 796, 1061, 1296, 1489, 1801
Hpy188I TCNGA 9 cut(s) 217, 230, 604, 909, 921, 1018, 1336, 1455, 1839
Hpy188III TCNNGA 6 cut(s) 689, 1260, 1312, 1442, 1475, 1743
Hpy8I GTNNAC 7 cut(s) 335, 380, 796, 1061, 1296, 1489, 1801
HpyAV CCTTC 3 cut(s) 61, 1382, 1520
HpyCH4III ACNGT 5 cut(s) 253, 377, 698, 1493, 1604
HpyCH4IV ACGT 1 cut(s) 1659
HpyF10VI GCNNNNNNNGC 5 cut(s) 319, 577, 788, 961, 1103
HpyF3I CTNAG 5 cut(s) 9, 227, 601, 746, 1836
HpySE526I ACGT 1 cut(s) 1659
Hsp92II CATG 5 cut(s) 760, 1067, 1307, 1436, 1762
HspAI GCGC 1 cut(s) 1284
Kzo9I GATC 6 cut(s) 302, 436, 535, 1564, 1819, 1907
LmnI GCTCC 2 cut(s) 952, 1262
Lsp1109I GCAGC 3 cut(s) 141, 1405, 1655
LweI GCATC 8 cut(s) 199, 595, 659, 884, 967, 1196, 1366, 1405
MaeI CTAG 6 cut(s) 446, 1043, 1181, 1299, 1568, 1770
MaeII ACGT 1 cut(s) 1659
MaeIII GTNAC 7 cut(s) 18, 48, 512, 529, 1070, 1246, 1328
MalI GATC 6 cut(s) 304, 438, 537, 1566, 1821, 1909
MboI GATC 6 cut(s) 302, 436, 535, 1564, 1819, 1907
MfeI CAATTG 1 cut(s) 135
MflI RGATCY 2 cut(s) 302, 535
MhlI GDGCHC 2 cut(s) 337, 664
MlsI TGGCCA 1 cut(s) 1052
MluNI TGGCCA 1 cut(s) 1052
MlyI GAGTC 3 cut(s) 26, 509, 1301
Mox20I TGGCCA 1 cut(s) 1052
Mph1103I ATGCAT 1 cut(s) 652
MroXI GAANNNNTTC 1 cut(s) 1902
MscI TGGCCA 1 cut(s) 1052
MslI CAYNNNNRTG 3 cut(s) 27, 57, 761
Msp20I TGGCCA 1 cut(s) 1052
MspA1I CMGCKG 1 cut(s) 545
MspI CCGG 2 cut(s) 879, 1514
MspR9I CCNGG 3 cut(s) 285, 880, 1515
MunI CAATTG 1 cut(s) 135
MvaI CCWGG 1 cut(s) 285
MwoI GCNNNNNNNGC 5 cut(s) 319, 577, 788, 961, 1103
NciI CCSGG 2 cut(s) 880, 1515
NdeII GATC 6 cut(s) 302, 436, 535, 1564, 1819, 1907
NlaIII CATG 5 cut(s) 760, 1067, 1307, 1436, 1762
NmuCI GTSAC 4 cut(s) 18, 48, 512, 529
NsiI ATGCAT 1 cut(s) 652
PaeR7I CTCGAG 1 cut(s) 657
PdmI GAANNNNTTC 1 cut(s) 1902
PfeI GAWTC 9 cut(s) 419, 620, 685, 777, 1013, 1157, 1202, 1684, 1824
PfoI TCCNGGA 1 cut(s) 878
PkrI GCNGC 3 cut(s) 131, 1420, 1645
PleI GAGTC 3 cut(s) 25, 509, 1300
PpsI GAGTC 3 cut(s) 25, 509, 1300
Psp6I CCWGG 1 cut(s) 283
PspGI CCWGG 1 cut(s) 283
PspPI GGNCC 3 cut(s) 826, 1637, 1766
PspXI VCTCGAGB 1 cut(s) 657
PstI CTGCAG 1 cut(s) 1645
PstNI CAGNNNCTG 3 cut(s) 234, 574, 1418
PsuI RGATCY 2 cut(s) 302, 535
PvuII CAGCTG 1 cut(s) 545
RsaI GTAC 4 cut(s) 555, 723, 861, 1490
RsaNI GTAC 4 cut(s) 554, 722, 860, 1489
RseI CAYNNNNRTG 3 cut(s) 27, 57, 761
SalI GTCGAC 1 cut(s) 1059
SatI GCNGC 3 cut(s) 130, 1419, 1644
Sau3AI GATC 6 cut(s) 302, 436, 535, 1564, 1819, 1907
Sau96I GGNCC 3 cut(s) 826, 1637, 1766
ScaI AGTACT 1 cut(s) 861
SchI GAGTC 3 cut(s) 26, 509, 1301
ScrFI CCNGG 3 cut(s) 285, 880, 1515
SduI GDGCHC 2 cut(s) 337, 664
SfaNI GCATC 8 cut(s) 199, 595, 659, 884, 967, 1196, 1366, 1405
SfcI CTRYAG 1 cut(s) 1641
Sfr274I CTCGAG 1 cut(s) 657
SinI GGWCC 1 cut(s) 1637
SlaI CTCGAG 1 cut(s) 657
SmiI ATTTAAAT 1 cut(s) 84
SmiMI CAYNNNNRTG 3 cut(s) 27, 57, 761
SmlI CTYRAG 8 cut(s) 498, 525, 657, 799, 932, 965, 1139, 1916
SmoI CTYRAG 8 cut(s) 498, 525, 657, 799, 932, 965, 1139, 1916
SsiI CCGC 1 cut(s) 980
SspMI CTAG 6 cut(s) 446, 1043, 1181, 1299, 1568, 1770
StyD4I CCNGG 3 cut(s) 283, 878, 1513
StyI CCWWGG 2 cut(s) 328, 445
SwaI ATTTAAAT 1 cut(s) 84
TaaI ACNGT 5 cut(s) 253, 377, 698, 1493, 1604
TaiI ACGT 1 cut(s) 1662
TaqI TCGA 8 cut(s) 658, 702, 1060, 1495, 1781, 1807, 1822, 1906
TatI WGTACW 3 cut(s) 553, 859, 1488
TfiI GAWTC 9 cut(s) 419, 620, 685, 777, 1013, 1157, 1202, 1684, 1824
TscAI CASTG 5 cut(s) 120, 256, 321, 798, 1035
TseFI GTSAC 4 cut(s) 18, 48, 512, 529
TseI GCWGC 3 cut(s) 129, 1418, 1643
Tsp45I GTSAC 4 cut(s) 18, 48, 512, 529
TspDTI ATGAA 9 cut(s) 17, 75, 1080, 1215, 1320, 1370, 1461, 1878, 1911
TspGWI ACGGA 1 cut(s) 613
TspRI CASTG 5 cut(s) 120, 256, 321, 798, 1035
VneI GTGCAC 1 cut(s) 333
VpaK11BI GGWCC 1 cut(s) 1637
XapI RAATTY 7 cut(s) 79, 121, 175, 264, 505, 804, 1619
XhoI CTCGAG 1 cut(s) 657
XmaJI CCTAGG 1 cut(s) 445
XmiI GTMKAC 1 cut(s) 1060
XmnI GAANNNNTTC 1 cut(s) 1902
XspI CTAG 6 cut(s) 446, 1043, 1181, 1299, 1568, 1770
ZrmI AGTACT 1 cut(s) 861
Zsp2I ATGCAT 1 cut(s) 652
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.