Rh5BG277300
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Reverse (-)
34945336 .. 34946168
833 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG277300.1

Sequence Viewer

Length: 453 bp
ATGGATGACTTTAGACATCATAAGCAGAGGTCAAAACTTGGAGGCGATGCAAGTCAAAATATTAATGAAGGCGATGTAAGTCAAAATTTTAATGAAGACTTTGAGATCTTGGGCTTTGGCGATGAAGATACTGGGGAGAGATTGAGCGACATATCTGATGGTGTTCTTTCAATGGGAACAGAAACCGATGGTTCAATGTCCAGTTCTTCTGTGGAGTTTACTCTTTTTCCTGAAGTTACAAAACCAACAGAACGCACAACTACTGAAACTCCAGAAGCCAAGAAAACTCAAGCTCAGAATGCTCTAGGCGAGAAGACACCATCCCATCCGACTGTAAGCCAACACCTAAGTTGGTCGATACAAAAGCCACTCGTTCATCATTGGTTAGAAGCTCGTCAAAGGTTTTGCCGAGTCCTAGGAAAGCTACTGCTGGAAGCAGCACCTCGTCGGTGA

Protein Analysis

150

Amino Acids

16.77

Weight (kDa)

5.33

Isoelectric Point (pI)

42.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 85
AcuI CTGAAG 1 cut(s) 252
AgsI TTSAA 2 cut(s) 171, 195
AluBI AGCT 3 cut(s) 293, 392, 424
AluI AGCT 3 cut(s) 293, 392, 424
ApeKI GCWGC 1 cut(s) 437
ApoI RAATTY 1 cut(s) 85
AseI ATTAAT 1 cut(s) 63
AspA2I CCTAGG 1 cut(s) 415
AvrII CCTAGG 1 cut(s) 415
BbsI GAAGAC 2 cut(s) 102, 320
BbvI GCAGC 1 cut(s) 449
BccI CCATC 4 cut(s) 152, 182, 328, 333
BfaI CTAG 2 cut(s) 305, 416
BglII AGATCT 1 cut(s) 105
BisI GCNGC 1 cut(s) 438
BlnI CCTAGG 1 cut(s) 415
BlsI GCNGC 1 cut(s) 439
BmrI ACTGGG 1 cut(s) 141
BmsI GCATC 1 cut(s) 37
BmuI ACTGGG 1 cut(s) 141
BpiI GAAGAC 2 cut(s) 102, 320
BpmI CTGGAG 1 cut(s) 255
BpuEI CTTGAG 1 cut(s) 273
BsaJI CCNNGG 1 cut(s) 415
BsaXI ACNNNNNCTCC 2 cut(s) 253, 283
Bse1I ACTGG 2 cut(s) 136, 201
BseDI CCNNGG 1 cut(s) 415
BseGI GGATG 3 cut(s) 10, 320, 325
BseMII CTCAG 1 cut(s) 308
BseNI ACTGG 2 cut(s) 136, 201
BseXI GCAGC 1 cut(s) 449
BsmI GAATGC 1 cut(s) 304
Bsp143I GATC 1 cut(s) 105
BspCNI CTCAG 1 cut(s) 307
BsrI ACTGG 2 cut(s) 136, 201
BssECI CCNNGG 1 cut(s) 415
BssMI GATC 1 cut(s) 105
BssT1I CCWWGG 1 cut(s) 415
Bst4CI ACNGT 1 cut(s) 334
BstDEI CTNAG 2 cut(s) 294, 347
BstF5I GGATG 3 cut(s) 10, 320, 325
BstKTI GATC 1 cut(s) 108
BstMBI GATC 1 cut(s) 105
BstMWI GCNNNNNNNGC 1 cut(s) 299
BstV1I GCAGC 1 cut(s) 449
BstV2I GAAGAC 2 cut(s) 102, 320
BstX2I RGATCY 1 cut(s) 105
BstYI RGATCY 1 cut(s) 105
BtgZI GCGATG 3 cut(s) 60, 87, 135
BtsCI GGATG 3 cut(s) 10, 320, 325
CviJI RGCY 7 cut(s) 114, 278, 293, 339, 367, 392, 424
CviKI_1 RGCY 7 cut(s) 114, 278, 293, 339, 367, 392, 424
DdeI CTNAG 2 cut(s) 294, 347
DpnI GATC 1 cut(s) 107
DpnII GATC 1 cut(s) 105
Eco130I CCWWGG 1 cut(s) 415
Eco57I CTGAAG 1 cut(s) 252
EcoT14I CCWWGG 1 cut(s) 415
ErhI CCWWGG 1 cut(s) 415
FaiI YATR 2 cut(s) 21, 152
Fnu4HI GCNGC 1 cut(s) 438
FokI GGATG 3 cut(s) 17, 307, 312
Fsp4HI GCNGC 1 cut(s) 438
FspBI CTAG 2 cut(s) 305, 416
GluI GCNGC 1 cut(s) 438
GsuI CTGGAG 1 cut(s) 255
HinfI GANTC 1 cut(s) 411
Hpy166II GTNNAC 1 cut(s) 219
Hpy188I TCNGA 3 cut(s) 157, 297, 330
Hpy188III TCNNGA 2 cut(s) 230, 272
Hpy8I GTNNAC 1 cut(s) 219
Hpy99I CGWCG 1 cut(s) 450
HpyAV CCTTC 1 cut(s) 62
HpyCH4III ACNGT 1 cut(s) 334
HpyCH4V TGCA 1 cut(s) 50
HpyF10VI GCNNNNNNNGC 1 cut(s) 299
HpyF3I CTNAG 2 cut(s) 294, 347
Kzo9I GATC 1 cut(s) 105
LpnPI CCDG 5 cut(s) 117, 214, 243, 285, 416
Lsp1109I GCAGC 1 cut(s) 449
LweI GCATC 1 cut(s) 37
MaeI CTAG 2 cut(s) 305, 416
MaeIII GTNAC 1 cut(s) 235
MalI GATC 1 cut(s) 107
MboI GATC 1 cut(s) 105
MboII GAAGA 4 cut(s) 107, 137, 198, 325
MflI RGATCY 1 cut(s) 105
MluCI AATT 1 cut(s) 85
MlyI GAGTC 1 cut(s) 420
MmeI TCCRAC 1 cut(s) 353
MnlI CCTC 3 cut(s) 21, 35, 453
MseI TTAA 2 cut(s) 63, 90
Mva1269I GAATGC 1 cut(s) 304
MwoI GCNNNNNNNGC 1 cut(s) 299
NdeII GATC 1 cut(s) 105
NmeAIII GCCGAG 1 cut(s) 434
PctI GAATGC 1 cut(s) 304
PkrI GCNGC 1 cut(s) 439
PleI GAGTC 1 cut(s) 419
PpsI GAGTC 1 cut(s) 419
PshBI ATTAAT 1 cut(s) 63
PsuI RGATCY 1 cut(s) 105
SaqAI TTAA 2 cut(s) 63, 90
SatI GCNGC 1 cut(s) 438
Sau3AI GATC 1 cut(s) 105
SchI GAGTC 1 cut(s) 420
SetI ASST 7 cut(s) 32, 295, 348, 394, 404, 426, 445
SfaNI GCATC 1 cut(s) 37
SmlI CTYRAG 1 cut(s) 288
SmoI CTYRAG 1 cut(s) 288
Sse9I AATT 1 cut(s) 85
SspI AATATT 1 cut(s) 61
SspMI CTAG 2 cut(s) 305, 416
StyI CCWWGG 1 cut(s) 415
TaaI ACNGT 1 cut(s) 334
TaqI TCGA 1 cut(s) 356
TasI AATT 1 cut(s) 85
Tru1I TTAA 2 cut(s) 63, 90
Tru9I TTAA 2 cut(s) 63, 90
TseI GCWGC 1 cut(s) 437
TspDTI ATGAA 4 cut(s) 81, 108, 138, 365
VspI ATTAAT 1 cut(s) 63
XapI RAATTY 1 cut(s) 85
XcmI CCANNNNNNNNNTGG 1 cut(s) 208
XmaJI CCTAGG 1 cut(s) 415
XspI CTAG 2 cut(s) 305, 416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.