Rmu_sc0003916.1_g000019
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003916.1
Physical Location & Seq
Forward (+)
63082 .. 63961
880 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003916.1_g000019.1.cds

Sequence Viewer

Length: 429 bp
atggatgactttagacatcataagcagaggtcaaaacttggaggcgatgcaagtcaaaatattaatgaaggcgatgcaagtcaaaatattaatgaaggcgatgcaagtcaaaattttaatgaagactttgagatcttgggctttggctatgaagatactggggagagattgagcgacatatctgatggtgttctttcaatgggaacagaaaccgatggttcaatgtccagttcttctgtggagtatactctttttcctgaagttacaaaaccaacagaacgcacaactactgaaactccagaagccaagaaattaaactcaagctcagaatgctctaggcgagaagacaccatcccatccgactgccctaggaaagctactgctggaagcagcacctcgtcggtgaagtctggcaaacgatggcaataa

Protein Analysis

142

Amino Acids

15.51

Weight (kDa)

4.63

Isoelectric Point (pI)

63.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 245
AcsI RAATTY 1 cut(s) 112
AcuI CTGAAG 1 cut(s) 279
AgsI TTSAA 2 cut(s) 198, 222
AluBI AGCT 2 cut(s) 324, 377
AluI AGCT 2 cut(s) 324, 377
ApeKI GCWGC 1 cut(s) 390
ApoI RAATTY 1 cut(s) 112
AseI ATTAAT 2 cut(s) 63, 90
AspA2I CCTAGG 1 cut(s) 368
AsuHPI GGTGA 1 cut(s) 415
AvrII CCTAGG 1 cut(s) 368
BbsI GAAGAC 2 cut(s) 129, 351
BbvI GCAGC 1 cut(s) 402
BccI CCATC 5 cut(s) 179, 209, 359, 364, 414
BfaI CTAG 2 cut(s) 336, 369
BglII AGATCT 1 cut(s) 132
BisI GCNGC 1 cut(s) 391
BlnI CCTAGG 1 cut(s) 368
BlsI GCNGC 1 cut(s) 392
BmrI ACTGGG 1 cut(s) 168
BmsI GCATC 3 cut(s) 37, 64, 91
BmuI ACTGGG 1 cut(s) 168
BpiI GAAGAC 2 cut(s) 129, 351
BpmI CTGGAG 1 cut(s) 282
BpuEI CTTGAG 1 cut(s) 304
BsaJI CCNNGG 1 cut(s) 368
BsaXI ACNNNNNCTCC 2 cut(s) 280, 310
Bse1I ACTGG 2 cut(s) 163, 228
BseDI CCNNGG 1 cut(s) 368
BseGI GGATG 3 cut(s) 10, 351, 356
BseMII CTCAG 1 cut(s) 339
BseNI ACTGG 2 cut(s) 163, 228
BseXI GCAGC 1 cut(s) 402
BsmI GAATGC 1 cut(s) 335
Bsp143I GATC 1 cut(s) 132
BspCNI CTCAG 1 cut(s) 338
BsrI ACTGG 2 cut(s) 163, 228
BssECI CCNNGG 1 cut(s) 368
BssMI GATC 1 cut(s) 132
BssNAI GTATAC 1 cut(s) 246
BssT1I CCWWGG 1 cut(s) 368
Bst1107I GTATAC 1 cut(s) 246
BstDEI CTNAG 1 cut(s) 325
BstF5I GGATG 3 cut(s) 10, 351, 356
BstKTI GATC 1 cut(s) 135
BstMBI GATC 1 cut(s) 132
BstMWI GCNNNNNNNGC 1 cut(s) 330
BstV1I GCAGC 1 cut(s) 402
BstV2I GAAGAC 2 cut(s) 129, 351
BstX2I RGATCY 1 cut(s) 132
BstYI RGATCY 1 cut(s) 132
BstZ17I GTATAC 1 cut(s) 246
BtgZI GCGATG 3 cut(s) 60, 87, 114
BtsCI GGATG 3 cut(s) 10, 351, 356
CviJI RGCY 5 cut(s) 141, 147, 305, 324, 377
CviKI_1 RGCY 5 cut(s) 141, 147, 305, 324, 377
DdeI CTNAG 1 cut(s) 325
DpnI GATC 1 cut(s) 134
DpnII GATC 1 cut(s) 132
Eco130I CCWWGG 1 cut(s) 368
Eco57I CTGAAG 1 cut(s) 279
EcoT14I CCWWGG 1 cut(s) 368
ErhI CCWWGG 1 cut(s) 368
FaiI YATR 4 cut(s) 21, 150, 179, 246
FblI GTMKAC 1 cut(s) 245
Fnu4HI GCNGC 1 cut(s) 391
FokI GGATG 3 cut(s) 17, 338, 343
Fsp4HI GCNGC 1 cut(s) 391
FspBI CTAG 2 cut(s) 336, 369
GluI GCNGC 1 cut(s) 391
GsuI CTGGAG 1 cut(s) 282
HphI GGTGA 1 cut(s) 415
Hpy166II GTNNAC 1 cut(s) 246
Hpy188I TCNGA 3 cut(s) 184, 328, 361
Hpy188III TCNNGA 2 cut(s) 257, 299
Hpy8I GTNNAC 1 cut(s) 246
Hpy99I CGWCG 1 cut(s) 403
HpyAV CCTTC 2 cut(s) 62, 89
HpyCH4V TGCA 3 cut(s) 50, 77, 104
HpyF10VI GCNNNNNNNGC 1 cut(s) 330
HpyF3I CTNAG 1 cut(s) 325
Kzo9I GATC 1 cut(s) 132
LpnPI CCDG 6 cut(s) 144, 241, 270, 312, 369, 396
Lsp1109I GCAGC 1 cut(s) 402
LweI GCATC 3 cut(s) 37, 64, 91
MaeI CTAG 2 cut(s) 336, 369
MaeIII GTNAC 1 cut(s) 262
MalI GATC 1 cut(s) 134
MboI GATC 1 cut(s) 132
MboII GAAGA 4 cut(s) 134, 164, 225, 356
MflI RGATCY 1 cut(s) 132
MluCI AATT 2 cut(s) 112, 311
MmeI TCCRAC 1 cut(s) 384
MnlI CCTC 3 cut(s) 21, 35, 406
MseI TTAA 4 cut(s) 63, 90, 117, 314
Mva1269I GAATGC 1 cut(s) 335
MwoI GCNNNNNNNGC 1 cut(s) 330
NdeII GATC 1 cut(s) 132
PctI GAATGC 1 cut(s) 335
PkrI GCNGC 1 cut(s) 392
PshBI ATTAAT 2 cut(s) 63, 90
PsuI RGATCY 1 cut(s) 132
SaqAI TTAA 4 cut(s) 63, 90, 117, 314
SatI GCNGC 1 cut(s) 391
Sau3AI GATC 1 cut(s) 132
SetI ASST 4 cut(s) 32, 326, 379, 398
SfaNI GCATC 3 cut(s) 37, 64, 91
SmlI CTYRAG 1 cut(s) 319
SmoI CTYRAG 1 cut(s) 319
Sse9I AATT 2 cut(s) 112, 311
SspI AATATT 2 cut(s) 61, 88
SspMI CTAG 2 cut(s) 336, 369
StyI CCWWGG 1 cut(s) 368
TasI AATT 2 cut(s) 112, 311
Tru1I TTAA 4 cut(s) 63, 90, 117, 314
Tru9I TTAA 4 cut(s) 63, 90, 117, 314
TseI GCWGC 1 cut(s) 390
TspDTI ATGAA 4 cut(s) 81, 108, 135, 165
VspI ATTAAT 2 cut(s) 63, 90
XapI RAATTY 1 cut(s) 112
XcmI CCANNNNNNNNNTGG 1 cut(s) 235
XmaJI CCTAGG 1 cut(s) 368
XmiI GTMKAC 1 cut(s) 245
XspI CTAG 2 cut(s) 336, 369
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.