Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0004003

Physical Location & Seq

Genomic Coordinates Forward (+)

15064764 .. 15072909

Gene Structure 8146 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG168100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2529 bp

ATGGCCCGGATCACCAAAAGCGGGTTCCCGCTCTCGTCCATGAAGCTGAAATTGGGGGTCGGGTCGGGTTTGGGAGAAAGGTTGGGGCTTTCGGCGGAGGAGGCTGGTTGGGGTTGCTGCGGCGTAGGGAAGAGGGGTTGTTGTGGGGAGGAAAGGTGGGAGGGCTCGATAGGCTTTCTGGGGTTGGGGCCGATGATGTGGAAGTTCAACAGAGACGAGCAATTCTCCTCCAGCTTCAACCAGAGCTCTCTGGCCGTGTCGCAGCCAATGATGTGGGAGAGAGCTGAGTTAGAGAGAGTGGCGTGGATCAACACCATCACGAAGACATTGTGCGCCATCCAGGCCGGCATTTCCAACATTTCGGAGGAATTTCGATTCCTCCGGCCACCGCGAAGCTCCTTCTCTGGTTGCTTGTGTTGTTTCAAAACCAGCTCTGCGTCTGCGATTGATAACAAGGAACAAGGCATTCCTACAGATTTTATGATGAGCATCCAGTCAGAGTCACAAAGAAATGGAAATGGGGGATCAGAGCTGCAAAAAGATGAAAATGAGGGGTCTGAATCACAGAAAGATGGAAATGGGAGATGCGAAATCTCAAATGGGACTTATAGTAAAGATGCTAAACTAGTGGAAAGCTCCGGCAGCACAATTGATGGTAACGAGATATTAGCTCTGGTGGAATGGTTAAATTATATCGTTCCTTATTTAAGATTGCCGACGGATGCTTCTGAGGAGGAAATCAGAGCCTGCCTAATTGATGGCACTGTTTTATGCAGAATTTTAAATAAGCTGTGTCCTGGTTCAGTTGAAATGGGAGGGAGTTCAGACCCTGGTTTTGCAAATGTCAAAAGGTTTCTGGTGGCTGTGGAGGAGTTAGGATTCCCTCCGTTTGAGCTTTTGGACCTAGAGCAGGGATCTTTGGTGCCAGTTATGCGGTGCCTCAGTGCACTCAAAACTTCATTTGATTTTGGTTTTTGGGAAGGGAACACTAAAAATGAAACAAAGACAGGAGGGGAGTTGTTGGAGATAGAATATTTAAGAAAAATTGATCGTAATCAATCATTCAAGAGATACGGACAACAGGGTACTCAAAATAGAGAAGGGACACAAGGAAATTCAGATGACTCAACTTCTGAAGTGACAGTTCCACCAGCTCTTCTAGAACAACTGAAGCAGGGGACTAATGTGGATCTCTGTGATGTCAAGATTTTGGAATCGATCAAATCAACCAGTTTAGATAATGCATCTACTCGGGCACTTTTCACTGTTGGGAATAGGATTCTGGATGACAGTGCCGAGAGAAATAACGGGGATGTACCTCAACATCTGGCTTATCTTCTGAGAAAAGTCATGCAAGTGATTGAACAACGATTTGCGAATCAAGCAGTGAACTTAAGAATTCAAAACAATATGTACAAGGGCCGTGAGGAGAAGTATCAAATGAAGATGAAAGTGCTTGAAACTCTTGCATCAGGGACCAGCGAAGAAATTCAGGTTGTTCTGAACCAGCTTAAGCAAATGAAGATTGAGCAGTTCAATATAGAGGAGAAGCAGAAAATCGAGGAGCAGGATGTACTGAGATTAAAGGAAGAGAAGGATCAGATGGGTTTGGAGATTTCGACATTAAAACAAGAACTGCAAACGACTAAAAGTACACATGAAAGCCACTGCCTGCAGTTAGAAGCAAATGCAAAAGAAGCTAAACTTGAATTGGAAAGGAAGTTGAAAGAACTTGAGTCCTTGCTAACAGGTTCAAAGAAGAATGAGAAAGAACTAGAGACATCTTTAGAATCTGTATCAGGGAAATGGAAACAGAAAGAAGGATCTTACCAAAGTTTTGTAAATTTTCAAGTTGGAGCTTTGAAGGAACTAAGTGCTGCTTTGGAATCTACACGATGTGAAATCATGAGTGCAAAACAAAGTTACTTTGAAGAATTTAATTGCATGGGATCGAAGCTTAGAGGATTAGCAGATGCGGCCGAAAAGTACCATGTAGTTCTTGCTGAGAATCGAAAGCTGTATAATGAGGTTCAGGATTTGAAAGGTAATATCAGAGTATACTGTCGAATAAGGCCATTCCTTCCTGGGCAAAGCCAGAAGCAGACCACCATAGAGTACGTTGGTGAAAATGGTGATTTGGTGATTGCAAATCCCTCTAAACAAAGAAAAGACAGCCGCAAGCTATTTAAATTTAATAAAGTATTTGGTCCTGCTGCTACACAAGAGGAGGTATTTCTAGACACCCAACCATTGATTCGTTCTGTCCTTGATGGATACAGTGTTTGTATATTTGCTTATGGTCAAACTGGTTCAGGAAAGACCTATACAATGAGTGGGCCCAGTGTAACATCAACAGAGGAATGGGGTGTCAACTATCGAGCCCTAAATGACCTTTTCCAAATATCTCAGAGCAGGAAAAGCTCCATAGAATATGAAGTTGGTGTTCAAATGGTTGAGATATACAATGAACAAGTTCGTGATTTACTCTCAAGTGATAGTTCTCGAAAAAGATATCCTTTTGTTCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0005886 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CH Kinesin Microtub_bd

Protein Analysis

842

Amino Acids

94.32

Weight (kDa)

5.45

Isoelectric Point (pI)

46.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CH	PF00307	225 - 319	5.6e-07	Calponin homology (CH) domain
Microtub_bd	PF16796	669 - 829	3.1e-44	Microtubule binding
Kinesin	PF00225	689 - 836	9.9e-41	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004003)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63640 AT1G63640 AT1G63640 AT1G63640 AT1G63640 AT5G41310
fragaria_vesca	FvH4_5g02480 FvH4_5g02480 FvH4_5g02480
malus_domestica	MD06G1083300.v1.1 MD14G1105100.v1.1
prunus_persica	Prupe.5G100400_v2.0.a1 Prupe.5G100400_v2.0.a1
pyrus_communis	pycom06g08010 pycom14g10070
rosa_chinensis	RchiOBHm_Chr5g0040651 RchiOBHm_Chr7g0197631 RchiOBHm_Chr7g0197651
rosa_laevigata	RLG00000003921
rosa_multiflora	Rmu_sc0003916.1_g000019 Rmu_sc0006732.1_g000004
rosa_roxburghii	Rroxscaffold_3G00258310
rosa_rugosa	Rorug07G0042000 Rorug07G0042100
rosa_samantha	Rh5BG277300 Rh7AG166400 Rh7BG168500 Rh7BG168600 Rh7CG174900 Rh7DG168100 Rh7DG168200
rosa_wichuraiana	Rw5G025550 Rw7G014490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	922, 936
AccBSI	CCGCTC	1 cut(s)	31
AccI	GTMKAC	1 cut(s)	2058
AccII	CGCG	1 cut(s)	391
AciI	CCGC	8 cut(s)	21, 29, 95, 120, 389, 934, 1976, 2176
AclWI	GGATC	8 cut(s)	17, 314, 532, 922, 1197, 1605, 1831, 1957
AcoI	YGGCCR	3 cut(s)	252, 383, 1977
AcsI	RAATTY	8 cut(s)	368, 777, 1114, 1398, 1488, 1843, 1934, 2189
AcuI	CTGAAG	2 cut(s)	1155, 1190
AdeI	CACNNNGTG	1 cut(s)	1898
AfaI	GTAC	7 cut(s)	1087, 1317, 1415, 1575, 1654, 1988, 2117
AfiI	CCNNNNNNNGG	2 cut(s)	21, 910
AflII	CTTAAG	2 cut(s)	1393, 1511
AhlI	ACTAGT	1 cut(s)	625
AjnI	CCWGG	4 cut(s)	339, 796, 829, 2083
AjuI	GAANNNNNNNTTGG	8 cut(s)	8, 35, 40, 67, 2238, 2270, 2421, 2453
Alw21I	GWGCWC	2 cut(s)	248, 949
Alw26I	GTCTC	2 cut(s)	207, 1772
Alw44I	GTGCAC	1 cut(s)	945
AlwI	GGATC	8 cut(s)	17, 314, 532, 922, 1197, 1605, 1831, 1957
AlwNI	CAGNNNCTG	2 cut(s)	747, 830
Ama87I	CYCGRG	1 cut(s)	1251
AoxI	GGCC	9 cut(s)	3, 188, 252, 342, 383, 1420, 1977, 2072, 2336
ApaI	GGGCCC	1 cut(s)	2340
ApaLI	GTGCAC	1 cut(s)	945
ApeKI	GCWGC	6 cut(s)	117, 262, 532, 642, 1877, 2213
ApoI	RAATTY	8 cut(s)	368, 777, 1114, 1398, 1488, 1843, 1934, 2189
ArsI	GACNNNNNNTTYG	2 cut(s)	818, 850
Asp700I	GAANNNNTTC	2 cut(s)	1488, 2472
AspLEI	GCGC	1 cut(s)	335
AspS9I	GGNCC	8 cut(s)	4, 188, 901, 1420, 1476, 2207, 2336, 2337
AsuC2I	CCSGG	1 cut(s)	7
AsuHPI	GGTGA	4 cut(s)	4, 2135, 2144, 2152
AvaI	CYCGRG	1 cut(s)	1251
AvaII	GGWCC	3 cut(s)	901, 1476, 2207
BaeGI	GKGCMC	3 cut(s)	949, 1258, 2340
BanI	GGYRCC	2 cut(s)	922, 936
BanII	GRGCYC	4 cut(s)	167, 248, 2340, 2383
BbsI	GAAGAC	1 cut(s)	329
Bbv12I	GWGCWC	2 cut(s)	248, 949
BbvI	GCAGC	6 cut(s)	104, 274, 519, 654, 1864, 2200
BccI	CCATC	7 cut(s)	323, 344, 566, 647, 752, 1597, 2264
BceAI	ACGGC	2 cut(s)	239, 1407
BciT130I	CCWGG	4 cut(s)	341, 798, 831, 2085
BciVI	GTATCC	1 cut(s)	2267
BcnI	CCSGG	1 cut(s)	7
BcoDI	GTCTC	2 cut(s)	207, 1772
BcuI	ACTAGT	1 cut(s)	625
BfaI	CTAG	5 cut(s)	626, 905, 1160, 1775, 2237
BfmI	CTRYAG	2 cut(s)	471, 1673
BfrI	CTTAAG	2 cut(s)	1393, 1511
BfuI	GTATCC	1 cut(s)	2267
BglI	GCCNNNNNGGC	1 cut(s)	341
BisI	GCNGC	9 cut(s)	118, 121, 263, 533, 643, 1878, 1977, 2176, 2214
BlsI	GCNGC	9 cut(s)	119, 122, 264, 534, 644, 1879, 1978, 2177, 2215
Bme1390I	CCNGG	5 cut(s)	7, 341, 798, 831, 2085
Bme18I	GGWCC	3 cut(s)	901, 1476, 2207
BmeT110I	CYCGRG	1 cut(s)	1251
BmgT120I	GGNCC	8 cut(s)	4, 188, 901, 1420, 1476, 2207, 2336, 2337
BmiI	GGNNCC	6 cut(s)	26, 189, 924, 938, 1477, 2338
BmrFI	CCNGG	5 cut(s)	7, 341, 798, 831, 2085
BmrI	ACTGGG	1 cut(s)	2334
BmsI	GCATC	7 cut(s)	498, 575, 607, 712, 1253, 1478, 1963
BmuI	ACTGGG	1 cut(s)	2334
BpiI	GAAGAC	1 cut(s)	329
BplI	GAGNNNNNCTC	2 cut(s)	209, 241
BpmI	CTGGAG	1 cut(s)	214
BpuEI	CTTGAG	2 cut(s)	1754, 2473
BpuMI	CCSGG	1 cut(s)	7
Bsa29I	ATCGAT	1 cut(s)	1217
BsaBI	GATNNNNATC	2 cut(s)	488, 1053
BsaJI	CCNNGG	2 cut(s)	829, 2084
BsaXI	ACNNNNNCTCC	2 cut(s)	140, 170
Bsc4I	CCNNNNNNNGG	2 cut(s)	21, 910
Bse118I	RCCGGY	1 cut(s)	344
Bse1I	ACTGG	5 cut(s)	493, 926, 1230, 2311, 2340
Bse8I	GATNNNNATC	2 cut(s)	488, 1053
BseBI	CCWGG	4 cut(s)	341, 798, 831, 2085
BseCI	ATCGAT	1 cut(s)	1217
BseDI	CCNNGG	2 cut(s)	829, 2084
BseGI	GGATG	6 cut(s)	336, 489, 727, 1291, 1318, 1576
BseJI	GATNNNNATC	2 cut(s)	488, 1053
BseLI	CCNNNNNNNGG	2 cut(s)	21, 910
BseMII	CTCAG	7 cut(s)	276, 720, 955, 1331, 1568, 1995, 2420
BseNI	ACTGG	5 cut(s)	493, 926, 1230, 2311, 2340
BseRI	GAGGAG	8 cut(s)	113, 217, 746, 884, 1442, 1559, 1577, 2240
BseSI	GKGCMC	3 cut(s)	949, 1258, 2340
BseX3I	CGGCCG	1 cut(s)	1977
BseXI	GCAGC	6 cut(s)	104, 274, 519, 654, 1864, 2200
Bsh1236I	CGCG	1 cut(s)	391
Bsh1285I	CGRYCG	1 cut(s)	1980
BshFI	GGCC	9 cut(s)	5, 190, 254, 344, 385, 1422, 1979, 2074, 2338
BshNI	GGYRCC	2 cut(s)	922, 936
BshVI	ATCGAT	1 cut(s)	1217
BsiEI	CGRYCG	1 cut(s)	1980
BsiHKAI	GWGCWC	2 cut(s)	248, 949
BsiHKCI	CYCGRG	1 cut(s)	1251
BsiSI	CCGG	4 cut(s)	7, 345, 382, 639
BslFI	GGGAC	4 cut(s)	616, 1117, 1192, 1489
BslI	CCNNNNNNNGG	2 cut(s)	21, 910
BsmAI	GTCTC	2 cut(s)	207, 1772
BsmBI	CGTCTC	1 cut(s)	207
BsmFI	GGGAC	4 cut(s)	616, 1117, 1192, 1489
BsmI	GAATGC	1 cut(s)	465
BsnI	GGCC	9 cut(s)	5, 190, 254, 344, 385, 1422, 1979, 2074, 2338
BsoBI	CYCGRG	1 cut(s)	1251
Bsp120I	GGGCCC	1 cut(s)	2336
Bsp1286I	GDGCHC	6 cut(s)	167, 248, 949, 1258, 2340, 2383
Bsp1407I	TGTACA	1 cut(s)	1413
BspACI	CCGC	8 cut(s)	21, 29, 95, 120, 389, 934, 1976, 2176
BspANI	GGCC	9 cut(s)	5, 190, 254, 344, 385, 1422, 1979, 2074, 2338
BspCNI	CTCAG	7 cut(s)	277, 721, 954, 1332, 1569, 1996, 2419
BspDI	ATCGAT	1 cut(s)	1217
BspFNI	CGCG	1 cut(s)	391
BspHI	TCATGA	1 cut(s)	1905
BspLI	GGNNCC	6 cut(s)	26, 189, 924, 938, 1477, 2338
BspMAI	CTGCAG	1 cut(s)	1677
BspPI	GGATC	8 cut(s)	17, 314, 532, 922, 1197, 1605, 1831, 1957
BspQI	GCTCTTC	1 cut(s)	1161
BspT107I	GGYRCC	2 cut(s)	922, 936
BspTI	CTTAAG	2 cut(s)	1393, 1511
BsrBI	CCGCTC	1 cut(s)	31
BsrFI	RCCGGY	1 cut(s)	344
BsrGI	TGTACA	1 cut(s)	1413
BsrI	ACTGG	5 cut(s)	493, 926, 1230, 2311, 2340
BssAI	RCCGGY	1 cut(s)	344
BssECI	CCNNGG	2 cut(s)	829, 2084
BssNAI	GTATAC	1 cut(s)	2059
Bst1107I	GTATAC	1 cut(s)	2059
Bst2UI	CCWGG	4 cut(s)	341, 798, 831, 2085
Bst4CI	ACNGT	6 cut(s)	766, 1144, 1267, 1292, 2063, 2279
Bst6I	CTCTTC	3 cut(s)	125, 1161, 1584
BstAFI	CTTAAG	2 cut(s)	1393, 1511
BstAUI	TGTACA	1 cut(s)	1413
BstC8I	GCNNGC	4 cut(s)	346, 748, 1673, 2180
BstDEI	CTNAG	9 cut(s)	285, 729, 941, 1340, 1577, 1871, 1958, 2004, 2406
BstENI	CCTNNNNNAGG	1 cut(s)	908
BstF5I	GGATG	6 cut(s)	336, 489, 727, 1291, 1318, 1576
BstFNI	CGCG	1 cut(s)	391
BstHHI	GCGC	1 cut(s)	335
BstMAI	GTCTC	2 cut(s)	207, 1772
BstMCI	CGRYCG	1 cut(s)	1980
BstMWI	GCNNNNNNNGC	9 cut(s)	101, 171, 341, 642, 931, 1382, 1697, 1976, 2418
BstNI	CCWGG	4 cut(s)	341, 798, 831, 2085
BstSCI	CCNGG	5 cut(s)	5, 339, 796, 829, 2083
BstSFI	CTRYAG	2 cut(s)	471, 1673
BstSLI	GKGCMC	3 cut(s)	949, 1258, 2340
BstUI	CGCG	1 cut(s)	391
BstV1I	GCAGC	6 cut(s)	104, 274, 519, 654, 1864, 2200
BstV2I	GAAGAC	1 cut(s)	329
BstX2I	RGATCY	3 cut(s)	914, 1189, 1823
BstXI	CCANNNNNNTGG	1 cut(s)	273
BstYI	RGATCY	3 cut(s)	914, 1189, 1823
BstZ17I	GTATAC	1 cut(s)	2059
BstZI	CGGCCG	1 cut(s)	1977
Bsu15I	ATCGAT	1 cut(s)	1217
BsuI	GTATCC	1 cut(s)	2267
BsuRI	GGCC	9 cut(s)	5, 190, 254, 344, 385, 1422, 1979, 2074, 2338
BsuTUI	ATCGAT	1 cut(s)	1217
BtsCI	GGATG	6 cut(s)	336, 489, 727, 1291, 1318, 1576
BtsI	GCAGTG	2 cut(s)	1392, 1666
BtsIMutI	CAGTG	8 cut(s)	762, 949, 1263, 1297, 1392, 1666, 2284, 2347
Cac8I	GCNNGC	4 cut(s)	346, 748, 1673, 2180
CaiI	CAGNNNCTG	2 cut(s)	747, 830
CciI	TCATGA	1 cut(s)	1905
CfoI	GCGC	1 cut(s)	335
Cfr10I	RCCGGY	1 cut(s)	344
Cfr13I	GGNCC	8 cut(s)	4, 188, 901, 1420, 1476, 2207, 2336, 2337
ClaI	ATCGAT	1 cut(s)	1217
CseI	GACGC	1 cut(s)	426
Csp6I	GTAC	7 cut(s)	1086, 1316, 1414, 1574, 1653, 1987, 2116
CviAII	CATG	6 cut(s)	40, 1351, 1658, 1906, 1945, 1991
CviQI	GTAC	7 cut(s)	1086, 1316, 1414, 1574, 1653, 1987, 2116
DdeI	CTNAG	9 cut(s)	285, 729, 941, 1340, 1577, 1871, 1958, 2004, 2406
DraI	TTTAAA	2 cut(s)	783, 2188
DraIII	CACNNNGTG	1 cut(s)	1898
EaeI	YGGCCR	3 cut(s)	252, 383, 1977
EagI	CGGCCG	1 cut(s)	1977
Eam1104I	CTCTTC	3 cut(s)	125, 1161, 1584
EarI	CTCTTC	3 cut(s)	125, 1161, 1584
EciI	GGCGGA	1 cut(s)	110
Ecl136II	GAGCTC	1 cut(s)	246
EclXI	CGGCCG	1 cut(s)	1977
Eco24I	GRGCYC	4 cut(s)	167, 248, 2340, 2383
Eco32I	GATATC	1 cut(s)	2513
Eco47I	GGWCC	3 cut(s)	901, 1476, 2207
Eco52I	CGGCCG	1 cut(s)	1977
Eco53kI	GAGCTC	1 cut(s)	246
Eco57I	CTGAAG	2 cut(s)	1155, 1190
Eco88I	CYCGRG	1 cut(s)	1251
EcoICRI	GAGCTC	1 cut(s)	246
EcoNI	CCTNNNNNAGG	1 cut(s)	908
EcoRI	GAATTC	1 cut(s)	1398
EcoRII	CCWGG	4 cut(s)	339, 796, 829, 2083
EcoRV	GATATC	1 cut(s)	2513
EcoT22I	ATGCAT	1 cut(s)	1246
EcoT38I	GRGCYC	4 cut(s)	167, 248, 2340, 2383
Esp3I	CGTCTC	1 cut(s)	207
FaeI	CATG	6 cut(s)	43, 1354, 1661, 1909, 1948, 1994
FalI	AAGNNNNNCTT	5 cut(s)	1689, 1721, 1864, 1896, 2500
FaqI	GGGAC	4 cut(s)	616, 1117, 1192, 1489
FatI	CATG	6 cut(s)	39, 1350, 1657, 1905, 1944, 1990
FauI	CCCGC	2 cut(s)	14, 36
FblI	GTMKAC	1 cut(s)	2058
Fnu4HI	GCNGC	9 cut(s)	118, 121, 263, 533, 643, 1878, 1977, 2176, 2214
FokI	GGATG	6 cut(s)	323, 476, 734, 1298, 1325, 1583
FriOI	GRGCYC	4 cut(s)	167, 248, 2340, 2383
Fsp4HI	GCNGC	9 cut(s)	118, 121, 263, 533, 643, 1878, 1977, 2176, 2214
FspBI	CTAG	5 cut(s)	626, 905, 1160, 1775, 2237
GlaI	GCGC	1 cut(s)	334
GluI	GCNGC	9 cut(s)	118, 121, 263, 533, 643, 1878, 1977, 2176, 2214
GsuI	CTGGAG	1 cut(s)	214
HaeIII	GGCC	9 cut(s)	5, 190, 254, 344, 385, 1422, 1979, 2074, 2338
HapII	CCGG	4 cut(s)	7, 345, 382, 639
HgaI	GACGC	1 cut(s)	426
HhaI	GCGC	1 cut(s)	335
Hin1II	CATG	6 cut(s)	43, 1354, 1661, 1909, 1948, 1994
Hin6I	GCGC	1 cut(s)	333
HinP1I	GCGC	1 cut(s)	333
HincII	GTYRAC	1 cut(s)	2371
HindII	GTYRAC	1 cut(s)	2371
HindIII	AAGCTT	1 cut(s)	1955
HpaII	CCGG	4 cut(s)	7, 345, 382, 639
HphI	GGTGA	4 cut(s)	4, 2135, 2144, 2152
Hpy166II	GTNNAC	5 cut(s)	947, 1390, 1655, 2059, 2371
Hpy8I	GTNNAC	5 cut(s)	947, 1390, 1655, 2059, 2371
Hpy99I	CGWCG	1 cut(s)	721
HpyAV	CCTTC	7 cut(s)	409, 974, 1094, 1588, 1814, 1858, 2090
HpyCH4III	ACNGT	6 cut(s)	766, 1144, 1267, 1292, 2063, 2279
HpyCH4IV	ACGT	1 cut(s)	2118
HpyF10VI	GCNNNNNNNGC	9 cut(s)	101, 171, 341, 642, 931, 1382, 1697, 1976, 2418
HpyF3I	CTNAG	9 cut(s)	285, 729, 941, 1340, 1577, 1871, 1958, 2004, 2406
HpySE526I	ACGT	1 cut(s)	2118
Hsp92II	CATG	6 cut(s)	43, 1354, 1661, 1909, 1948, 1994
HspAI	GCGC	1 cut(s)	333
KroI	GCCGGC	1 cut(s)	344
KroNI	GCCGGC	1 cut(s)	346
LguI	GCTCTTC	1 cut(s)	1161
LmnI	GCTCC	5 cut(s)	401, 641, 1564, 1856, 2426
Lsp1109I	GCAGC	6 cut(s)	104, 274, 519, 654, 1864, 2200
LweI	GCATC	7 cut(s)	498, 575, 607, 712, 1253, 1478, 1963
MaeI	CTAG	5 cut(s)	626, 905, 1160, 1775, 2237
MaeII	ACGT	1 cut(s)	2118
MaeIII	GTNAC	5 cut(s)	501, 656, 1138, 1922, 2344
MbiI	CCGCTC	1 cut(s)	31
MfeI	CAATTG	1 cut(s)	648
MflI	RGATCY	3 cut(s)	914, 1189, 1823
MhlI	GDGCHC	6 cut(s)	167, 248, 949, 1258, 2340, 2383
MlyI	GAGTC	3 cut(s)	509, 1118, 1745
MmeI	TCCRAC	3 cut(s)	378, 1002, 1834
Mph1103I	ATGCAT	1 cut(s)	1246
MroNI	GCCGGC	1 cut(s)	344
MroXI	GAANNNNTTC	2 cut(s)	1488, 2472
MslI	CAYNNNNRTG	1 cut(s)	1355
MspCI	CTTAAG	2 cut(s)	1393, 1511
MspI	CCGG	4 cut(s)	7, 345, 382, 639
MspR9I	CCNGG	5 cut(s)	7, 341, 798, 831, 2085
MunI	CAATTG	1 cut(s)	648
Mva1269I	GAATGC	1 cut(s)	465
MvaI	CCWGG	4 cut(s)	341, 798, 831, 2085
MvnI	CGCG	1 cut(s)	391
MwoI	GCNNNNNNNGC	9 cut(s)	101, 171, 341, 642, 931, 1382, 1697, 1976, 2418
NaeI	GCCGGC	1 cut(s)	346
NciI	CCSGG	1 cut(s)	7
NgoMIV	GCCGGC	1 cut(s)	344
NlaIII	CATG	6 cut(s)	43, 1354, 1661, 1909, 1948, 1994
NlaIV	GGNNCC	6 cut(s)	26, 189, 924, 938, 1477, 2338
NmeAIII	GCCGAG	1 cut(s)	1321
NmuCI	GTSAC	2 cut(s)	501, 1138
NsiI	ATGCAT	1 cut(s)	1246
PagI	TCATGA	1 cut(s)	1905
PciSI	GCTCTTC	1 cut(s)	1161
PctI	GAATGC	1 cut(s)	465
PdiI	GCCGGC	1 cut(s)	346
PdmI	GAANNNNTTC	2 cut(s)	1488, 2472
PkrI	GCNGC	9 cut(s)	119, 122, 264, 534, 644, 1879, 1978, 2177, 2215
PleI	GAGTC	3 cut(s)	508, 1118, 1744
PpsI	GAGTC	3 cut(s)	508, 1118, 1744
Psp124BI	GAGCTC	1 cut(s)	248
Psp6I	CCWGG	4 cut(s)	339, 796, 829, 2083
PspGI	CCWGG	4 cut(s)	339, 796, 829, 2083
PspN4I	GGNNCC	6 cut(s)	26, 189, 924, 938, 1477, 2338
PspOMI	GGGCCC	1 cut(s)	2336
PspPI	GGNCC	8 cut(s)	4, 188, 901, 1420, 1476, 2207, 2336, 2337
PstI	CTGCAG	1 cut(s)	1677
PstNI	CAGNNNCTG	2 cut(s)	747, 830
PsuI	RGATCY	3 cut(s)	914, 1189, 1823
RsaI	GTAC	7 cut(s)	1087, 1317, 1415, 1575, 1654, 1988, 2117
RsaNI	GTAC	7 cut(s)	1086, 1316, 1414, 1574, 1653, 1987, 2116
RseI	CAYNNNNRTG	1 cut(s)	1355
SacI	GAGCTC	1 cut(s)	248
SapI	GCTCTTC	1 cut(s)	1161
SatI	GCNGC	9 cut(s)	118, 121, 263, 533, 643, 1878, 1977, 2176, 2214
Sau96I	GGNCC	8 cut(s)	4, 188, 901, 1420, 1476, 2207, 2336, 2337
SchI	GAGTC	3 cut(s)	509, 1118, 1745
ScrFI	CCNGG	5 cut(s)	7, 341, 798, 831, 2085
SduI	GDGCHC	6 cut(s)	167, 248, 949, 1258, 2340, 2383
SfaNI	GCATC	7 cut(s)	498, 575, 607, 712, 1253, 1478, 1963
SfcI	CTRYAG	2 cut(s)	471, 1673
SinI	GGWCC	3 cut(s)	901, 1476, 2207
SmiI	ATTTAAAT	1 cut(s)	2188
SmiMI	CAYNNNNRTG	1 cut(s)	1355
SmlI	CTYRAG	4 cut(s)	1393, 1511, 1733, 2488
SmoI	CTYRAG	4 cut(s)	1393, 1511, 1733, 2488
SpeI	ACTAGT	1 cut(s)	625
SsiI	CCGC	8 cut(s)	21, 29, 95, 120, 389, 934, 1976, 2176
SspI	AATATT	1 cut(s)	1034
SspMI	CTAG	5 cut(s)	626, 905, 1160, 1775, 2237
SstI	GAGCTC	1 cut(s)	248
StyD4I	CCNGG	5 cut(s)	5, 339, 796, 829, 2083
SwaI	ATTTAAAT	1 cut(s)	2188
TaaI	ACNGT	6 cut(s)	766, 1144, 1267, 1292, 2063, 2279
TaiI	ACGT	1 cut(s)	2121
TatI	WGTACW	3 cut(s)	1413, 1573, 1652
TauI	GCSGC	3 cut(s)	123, 1979, 2178
TscAI	CASTG	8 cut(s)	769, 949, 1270, 1297, 1392, 1673, 2284, 2347
TseFI	GTSAC	2 cut(s)	501, 1138
TseI	GCWGC	6 cut(s)	117, 262, 532, 642, 1877, 2213
Tsp45I	GTSAC	2 cut(s)	501, 1138
TspGWI	ACGGA	3 cut(s)	734, 876, 1089
TspRI	CASTG	8 cut(s)	769, 949, 1270, 1297, 1392, 1673, 2284, 2347
Vha464I	CTTAAG	2 cut(s)	1393, 1511
VneI	GTGCAC	1 cut(s)	945
VpaK11BI	GGWCC	3 cut(s)	901, 1476, 2207
XagI	CCTNNNNNAGG	1 cut(s)	908
XapI	RAATTY	8 cut(s)	368, 777, 1114, 1398, 1488, 1843, 1934, 2189
XbaI	TCTAGA	2 cut(s)	1159, 2236
XmiI	GTMKAC	1 cut(s)	2058
XmnI	GAANNNNTTC	2 cut(s)	1488, 2472
XspI	CTAG	5 cut(s)	626, 905, 1160, 1775, 2237
Zsp2I	ATGCAT	1 cut(s)	1246

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.