No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g05901 FvH4_5g05910 FvH4_5g06031 FvH4_5g06041 FvH4_5g06042 FvH4_5g06043 |
| malus_domestica | MD14G1173200.v1.1 MD14G1173300.v1.1 |
| prunus_persica | Prupe.5G167400_v2.0.a1 |
| pyrus_communis | pycom14g14460 |
| rosa_chinensis | RchiOBHm_Chr7g0192821 |
| rosa_laevigata | RLG00000004324 RLG00000004325 RLG00000004326 |
| rosa_multiflora | Rmu_sc0002040.1_g000030 |
| rosa_roxburghii | Rroxscaffold_3G00262640 Rroxscaffold_3G00262650 Rroxscaffold_3G00262660 Rroxscaffold_6G00399920 |
| rosa_rugosa | Rorug03G0193000 Rorug07G0004600 Rorug07G0004700 Rorug07G0004700 Rorug07G0004800 |
| rosa_samantha | Rh3AG244200 Rh3AG244300 Rh3BG279200 Rh3BG279400 Rh3CG274200 Rh3CG274300 Rh3DG271000 Rh7AG130100 Rh7AG130200 Rh7AG130300 Rh7AG130400 Rh7BG131300 Rh7CG134500 Rh7CG134600 Rh7CG134700 Rh7CG134800 Rh7DG132300 Rh7DG132400 Rh7DG132500 |
| rosa_wichuraiana | Rw7G011140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AdeI | CACNNNGTG | 1 cut(s) | 293 |
| AfaI | GTAC | 1 cut(s) | 90 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 142, 162, 174, 194 |
| AluBI | AGCT | 2 cut(s) | 32, 177 |
| AluI | AGCT | 2 cut(s) | 32, 177 |
| AspLEI | GCGC | 1 cut(s) | 104 |
| AsuHPI | GGTGA | 1 cut(s) | 255 |
| BaeGI | GKGCMC | 1 cut(s) | 219 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 36, 68, 78, 110 |
| BccI | CCATC | 1 cut(s) | 227 |
| BfmI | CTRYAG | 1 cut(s) | 133 |
| BfoI | RGCGCY | 1 cut(s) | 105 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 223 |
| BmcAI | AGTACT | 1 cut(s) | 90 |
| BpmI | CTGGAG | 1 cut(s) | 166 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 238, 268 |
| BseGI | GGATG | 3 cut(s) | 188, 219, 248 |
| BseMII | CTCAG | 2 cut(s) | 96, 224 |
| BseRI | GAGGAG | 1 cut(s) | 297 |
| BseSI | GKGCMC | 1 cut(s) | 219 |
| BsiSI | CCGG | 1 cut(s) | 223 |
| Bsp1286I | GDGCHC | 1 cut(s) | 219 |
| BspCNI | CTCAG | 2 cut(s) | 97, 225 |
| BspMAI | CTGCAG | 1 cut(s) | 137 |
| Bst4CI | ACNGT | 3 cut(s) | 43, 214, 261 |
| Bst6I | CTCTTC | 1 cut(s) | 104 |
| BstDEI | CTNAG | 3 cut(s) | 105, 188, 233 |
| BstF5I | GGATG | 3 cut(s) | 188, 219, 248 |
| BstH2I | RGCGCY | 1 cut(s) | 105 |
| BstHHI | GCGC | 1 cut(s) | 104 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 141, 223 |
| BstSFI | CTRYAG | 1 cut(s) | 133 |
| BstSLI | GKGCMC | 1 cut(s) | 219 |
| BtsCI | GGATG | 3 cut(s) | 188, 219, 248 |
| CfoI | GCGC | 1 cut(s) | 104 |
| Csp6I | GTAC | 1 cut(s) | 89 |
| CviAII | CATG | 2 cut(s) | 98, 321 |
| CviJI | RGCY | 5 cut(s) | 32, 144, 177, 231, 297 |
| CviKI_1 | RGCY | 5 cut(s) | 32, 144, 177, 231, 297 |
| CviQI | GTAC | 1 cut(s) | 89 |
| DdeI | CTNAG | 3 cut(s) | 105, 188, 233 |
| DraIII | CACNNNGTG | 1 cut(s) | 293 |
| Eam1104I | CTCTTC | 1 cut(s) | 104 |
| EarI | CTCTTC | 1 cut(s) | 104 |
| FaeI | CATG | 2 cut(s) | 101, 324 |
| FaiI | YATR | 5 cut(s) | 46, 99, 282, 300, 322 |
| FatI | CATG | 2 cut(s) | 97, 320 |
| FokI | GGATG | 3 cut(s) | 195, 206, 235 |
| GlaI | GCGC | 1 cut(s) | 103 |
| GsuI | CTGGAG | 1 cut(s) | 166 |
| HaeII | RGCGCY | 1 cut(s) | 105 |
| HapII | CCGG | 1 cut(s) | 223 |
| HhaI | GCGC | 1 cut(s) | 104 |
| Hin1II | CATG | 2 cut(s) | 101, 324 |
| Hin6I | GCGC | 1 cut(s) | 102 |
| HinP1I | GCGC | 1 cut(s) | 102 |
| HincII | GTYRAC | 1 cut(s) | 130 |
| HindII | GTYRAC | 1 cut(s) | 130 |
| HpaII | CCGG | 1 cut(s) | 223 |
| HphI | GGTGA | 1 cut(s) | 255 |
| Hpy166II | GTNNAC | 1 cut(s) | 130 |
| Hpy8I | GTNNAC | 1 cut(s) | 130 |
| HpyAV | CCTTC | 1 cut(s) | 164 |
| HpyCH4III | ACNGT | 3 cut(s) | 43, 214, 261 |
| HpyCH4V | TGCA | 4 cut(s) | 71, 135, 302, 320 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 141, 223 |
| HpyF3I | CTNAG | 3 cut(s) | 105, 188, 233 |
| Hsp92II | CATG | 2 cut(s) | 101, 324 |
| HspAI | GCGC | 1 cut(s) | 102 |
| LpnPI | CCDG | 5 cut(s) | 81, 130, 236, 245, 275 |
| MaeIII | GTNAC | 3 cut(s) | 37, 244, 261 |
| MboII | GAAGA | 5 cut(s) | 41, 44, 69, 86, 121 |
| MhlI | GDGCHC | 1 cut(s) | 219 |
| MluCI | AATT | 1 cut(s) | 156 |
| MnlI | CCTC | 4 cut(s) | 131, 262, 315, 318 |
| MseI | TTAA | 1 cut(s) | 270 |
| MspI | CCGG | 1 cut(s) | 223 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 141, 223 |
| NlaIII | CATG | 2 cut(s) | 101, 324 |
| NmuCI | GTSAC | 1 cut(s) | 261 |
| PstI | CTGCAG | 1 cut(s) | 137 |
| RsaI | GTAC | 1 cut(s) | 90 |
| RsaNI | GTAC | 1 cut(s) | 89 |
| SaqAI | TTAA | 1 cut(s) | 270 |
| ScaI | AGTACT | 1 cut(s) | 90 |
| SduI | GDGCHC | 1 cut(s) | 219 |
| SetI | ASST | 5 cut(s) | 34, 142, 175, 179, 307 |
| SfcI | CTRYAG | 1 cut(s) | 133 |
| Sse9I | AATT | 1 cut(s) | 156 |
| TaaI | ACNGT | 3 cut(s) | 43, 214, 261 |
| TaqI | TCGA | 2 cut(s) | 122, 277 |
| TasI | AATT | 1 cut(s) | 156 |
| TatI | WGTACW | 1 cut(s) | 88 |
| Tru1I | TTAA | 1 cut(s) | 270 |
| Tru9I | TTAA | 1 cut(s) | 270 |
| TseFI | GTSAC | 1 cut(s) | 261 |
| Tsp45I | GTSAC | 1 cut(s) | 261 |
| TspDTI | ATGAA | 2 cut(s) | 69, 86 |
| ZrmI | AGTACT | 1 cut(s) | 90 |