Rorug07G0004700

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0002152
Physical Location & Seq
Reverse (-)
394295 .. 397743
3449 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0004700.1

Sequence Viewer

Length: 2445 bp
ATGTTATGGTGCGGTCGCCAACTCCCTCGTCGCCATGTTATTGACCAATTCACAACTCTAGGCGCACAAGCCTTTTCATCAAACCCTCTTCACTACTACTGTAACTACACAAATCTCCTTGAAGCCTGCATTCGATCTAAATCTGTCGCTCAAGCCAAGATAATCCATCAACTTGTTATAAAAGACAATACCCAGATCGAGGACAGGTCTCTTCTACTTGAAAAACTAGCCCGGCTCTACTTGACCTGTAATCAAGTTGAGGTCGCACGCCGAGTGTTCGACGAAATTCCCCAACCAAATCCAAATGTTATTATTTGGAACCTATTGATAAGAGCCTATGCATGGAACGGACCGTTTGAACGAGCCATAGAGTTGTACTATGGCATGCTCGAACTGGGCGTTAAACCAAGCAAGTACACGTACCCTTTTGTTCTCAAGGCATGCTCGGGTTTGCAGGCGCTACACGTTGGTCAAGACATTCATCAACATGCGAAACGACTTGGGCTCGGCTCTGACGTCTATGTTTGCACTGCTTTGATTGATTTGTACGCAAAATGTGGAGACTTGGTAGCTGCGCAGAGTGTGTTTGATGGTATGCTGTATAAAGATGTTGTGGCGTGGAATGCTATGATTGCTGGGTTTTCGCTTCATGGTCTTTGTGGTGACACTGCAGAGTTGCTGGTTCAAATGCAGAGAGCGGGAACTGCCCCGAATGCCTCTACCATTGTTGCGGTTCTTCCCACAGTTGCGCAAGCTAACGCGCTGAGCCAAGGGAAGGCCATGCATGGTTACTCCATGAGGAGGAGGTTTAGTGATGACGTGGTACTTAGTACTGCGCTTTTGGATATGTATGCTAAATGTCAGTGCATAGTTTACGCGAGGAGAATCTTTGATGCAATGAGTGTCAGGAATGAGGTTTGTTGGAGTGCGATGATAGGCGCATATGTTGGCTGTGATTCCATGAGAGAGGCAATGTCATTGTTTGATGAAATGGTGGTGAAAGATGTAAGAAAACTGACACGAGTTACACTGGGGAGCATACTCCGAGCTTGCACAAAGCTAACTGATCTGAGTAGAGGGAGACGAGTACATTGTTATGCAATTAAAGCCGGTTTTGATTTAAATACAATGGTGGGCAACACCATCCTTTCTATGTATGCAAAGTGTGGGATTATAGATGATGCATTCAGGTTATTTGATATAATGGATCCAAAAGACACGGTTTCTTATGGGGCTATCATCTCAGGTTGTGTGCAGAATGGTTATGCAAAGGAAGCTTTGCTTATATTCCACCAAATGCAGTTGTCTGGGATTGATCCAGATTTGGCAACCATGGCAGGTGTTTTGCCGGCTTGTTCACATTTGGCAGCCCTGCAACATGGGGCCTGTGGCCATGGTTATTCAATTGCTCATGGCTTTGCTACAGACACCTCAATTTGTAATGCCTTAATAGACATGTACTCGAAATGTGGGAAGATCCATATAGGCAGGCAAGTATTCGACAGAATGCTTAAGCGGGATACTGTCTCATGGAACACAATGATAGTTGGTTATGGGATTCATGGCCTTGGGATGGAAGCAATTTCACAGTTCCACAATATGCAGGCAGCTGGAATAAAGCCCGACGATGTGACTTTCATTGGCCTCTTATCTGCTTGCAGTCATTCGGGGCTTGTCACTGAAGGAAAACACTGGTTTAGTGCTATGAGTCAAGATTTCAGCATAACCCCAAGGATGGAACACTACATATGCATGGTGGATCTTCTTGCCCGAACTGGACTGTTGGCCGAGGCGCACAGTTTCATTCAAAGCATGCCATTTGAGGCTGATGTTCGAGTATGGAGTGCACTACTTGCTGCATGTAGGGTTCACAATAATATTGAACTTGGGGAAGAAGTGTCCAGGAAAGTTCAAGGGCTTGGATCTGAAGGTACCGGAAATTTGGTCCTCTTATCTAATATGTACAGTTCTATTGGGAGATGGGATGATGCAGCGCATGTCAGAATTAAACAGAAGGATCAAGGCCTTAAGAAGAGTCCAGGATGTAGTTGGGTCGAGATTAATGGGGTGATTCATGGATTTCTCGGTGGAGATCAGTCCCATCCTGAATCGGCTCAGATACATGAAAAATTAGAGGAACTGCTAGTAGACATGAAAAGGATGGGATATTGTGCAGAAAATAGTTTTGTTCTCCAAGATGTTGAGGAAGAGGAGAAAGAAAGGATCCTCCTCTATCATAGTGAAAAACTAGCCATTGCTTATGGAGCTCTTCATCTGAGCCCGGGGAAACCCATTTTTGTTACTAAAAATCTGCGGGTCTGTGGTGATTGCCATGCTGCTATAAAGTCCATCTCTCTTGTTACAAAGAGAGAGATAACCGTAAGAGATGTGAGTCGGTTTCATCATTTCAGTGATGGAAATTGCAGTTGTGCAGACTTTTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

814

Amino Acids

90.21

Weight (kDa)

7.0

Isoelectric Point (pI)

40.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 101 - 148 2.3e-10 PPR repeat family
PPR_2 PF13041 304 - 352 8.2e-06 PPR repeat family
PPR_2 PF13041 405 - 452 1.8e-07 PPR repeat family
PPR PF01535 408 - 438 7.7e-06 PPR repeat
PPR_2 PF13041 506 - 554 5.2e-10 PPR repeat family
E_motif PF20431 624 - 686 5.5e-18 E motif
Eplus_motif PF20430 691 - 715 2e-07 E+ motif
DYW_deaminase PF14432 722 - 814 2.1e-38 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 179
AarI CACCTGC 1 cut(s) 1328
AatII GACGTC 1 cut(s) 519
Acc16I TGCGCA 2 cut(s) 576, 750
Acc36I ACCTGC 1 cut(s) 1328
Acc65I GGTACC 1 cut(s) 1931
AccB1I GGYRCC 1 cut(s) 1931
AccBSI CCGCTC 1 cut(s) 698
AccI GTMKAC 1 cut(s) 2148
AccII CGCG 2 cut(s) 761, 878
AciI CCGC 5 cut(s) 12, 698, 731, 1516, 2314
AclWI GGATC 9 cut(s) 1202, 1215, 1310, 1471, 1767, 1930, 2025, 2218, 2231
AcoI YGGCCR 2 cut(s) 1390, 1785
AcsI RAATTY 2 cut(s) 285, 1939
AcuI CTGAAG 2 cut(s) 1701, 1947
AcyI GRCGYC 1 cut(s) 516
AfiI CCNNNNNNNGG 6 cut(s) 199, 342, 775, 801, 1573, 1735
AflII CTTAAG 2 cut(s) 1511, 2027
AflIII ACRYGT 3 cut(s) 417, 463, 1455
AgsI TTSAA 8 cut(s) 122, 221, 359, 686, 1404, 1808, 1883, 1913
AjiI CACGTC 1 cut(s) 820
AjnI CCWGG 2 cut(s) 1901, 2038
AluBI AGCT 7 cut(s) 572, 755, 1049, 1060, 1277, 1610, 2267
AluI AGCT 7 cut(s) 572, 755, 1049, 1060, 1277, 1610, 2267
Alw21I GWGCWC 2 cut(s) 1849, 2269
Alw26I GTCTC 4 cut(s) 213, 555, 1075, 1531
Alw44I GTGCAC 1 cut(s) 1845
AlwI GGATC 9 cut(s) 1202, 1215, 1310, 1471, 1767, 1930, 2025, 2218, 2231
Ama87I CYCGRG 2 cut(s) 445, 2281
AoxI GGCC 7 cut(s) 777, 1383, 1390, 1564, 1642, 1785, 2023
ApaLI GTGCAC 1 cut(s) 1845
ApeKI GCWGC 6 cut(s) 572, 1367, 1607, 1856, 1991, 2336
ApoI RAATTY 2 cut(s) 285, 1939
AseI ATTAAT 1 cut(s) 2061
Asp718I GGTACC 1 cut(s) 1931
AspLEI GCGC 9 cut(s) 65, 460, 577, 751, 763, 838, 941, 1795, 1996
AspS9I GGNCC 3 cut(s) 350, 1383, 1945
AsuC2I CCSGG 3 cut(s) 232, 2282, 2283
AsuHPI GGTGA 4 cut(s) 674, 1009, 2080, 2336
AvaI CYCGRG 2 cut(s) 445, 2281
AvaII GGWCC 2 cut(s) 350, 1945
BaeGI GKGCMC 1 cut(s) 1849
BalI TGGCCA 1 cut(s) 1392
BamHI GGATCC 2 cut(s) 1207, 2223
BanI GGYRCC 1 cut(s) 1931
BanII GRGCYC 3 cut(s) 507, 2269, 2282
BauI CACGAG 1 cut(s) 1020
Bbv12I GWGCWC 2 cut(s) 1849, 2269
BbvI GCAGC 6 cut(s) 559, 1379, 1619, 1843, 2003, 2323
BciT130I CCWGG 2 cut(s) 1903, 2040
BciVI GTATCC 1 cut(s) 1513
BcnI CCSGG 3 cut(s) 232, 2282, 2283
BcoDI GTCTC 4 cut(s) 213, 555, 1075, 1531
BfaI CTAG 4 cut(s) 59, 227, 2144, 2249
BfmI CTRYAG 2 cut(s) 669, 1422
BfoI RGCGCY 1 cut(s) 461
BfrI CTTAAG 2 cut(s) 1511, 2027
BfuAI ACCTGC 1 cut(s) 1328
BfuI GTATCC 1 cut(s) 1513
BisI GCNGC 6 cut(s) 573, 1368, 1608, 1857, 1992, 2337
BlpI GCTNAGC 1 cut(s) 764
BlsI GCNGC 6 cut(s) 574, 1369, 1609, 1858, 1993, 2338
BmcAI AGTACT 1 cut(s) 832
Bme1390I CCNGG 5 cut(s) 232, 1903, 2040, 2282, 2283
Bme18I GGWCC 2 cut(s) 350, 1945
BmeT110I CYCGRG 2 cut(s) 445, 2281
BmgBI CACGTC 1 cut(s) 820
BmgT120I GGNCC 3 cut(s) 350, 1383, 1945
BmiI GGNNCC 5 cut(s) 320, 1209, 1384, 1933, 2225
BmrFI CCNGG 5 cut(s) 232, 1903, 2040, 2282, 2283
BmrI ACTGGG 2 cut(s) 404, 1040
BmsI GCATC 3 cut(s) 883, 1171, 1978
BmuI ACTGGG 2 cut(s) 404, 1040
Bpu1102I GCTNAGC 1 cut(s) 764
BpuEI CTTGAG 2 cut(s) 135, 419
BpuMI CCSGG 3 cut(s) 232, 2282, 2283
BsaAI YACGTR 1 cut(s) 420
BsaBI GATNNNNATC 1 cut(s) 139
BsaHI GRCGYC 1 cut(s) 516
BsaI GGTCTC 1 cut(s) 213
BsaJI CCNNGG 8 cut(s) 769, 1332, 1393, 1567, 1730, 1788, 2281, 2282
BsaWI WCCGGW 1 cut(s) 1934
BsaXI ACNNNNNCTCC 4 cut(s) 552, 582, 796, 826
Bsc4I CCNNNNNNNGG 6 cut(s) 199, 342, 775, 801, 1573, 1735
Bse118I RCCGGY 2 cut(s) 1109, 1348
Bse1I ACTGG 4 cut(s) 399, 1035, 1697, 1780
Bse3DI GCAATG 3 cut(s) 903, 978, 2253
Bse8I GATNNNNATC 1 cut(s) 139
BseBI CCWGG 2 cut(s) 1903, 2040
BseDI CCNNGG 8 cut(s) 769, 1332, 1393, 1567, 1730, 1788, 2281, 2282
BseGI GGATG 7 cut(s) 1143, 1578, 1740, 1990, 2048, 2101, 2166
BseJI GATNNNNATC 1 cut(s) 139
BseLI CCNNNNNNNGG 6 cut(s) 199, 342, 775, 801, 1573, 1735
BseMI GCAATG 3 cut(s) 903, 978, 2253
BseMII CTCAG 5 cut(s) 755, 1061, 1257, 2129, 2267
BseNI ACTGG 4 cut(s) 399, 1035, 1697, 1780
BseRI GAGGAG 5 cut(s) 814, 817, 895, 2219, 2225
BseSI GKGCMC 1 cut(s) 1849
BseXI GCAGC 6 cut(s) 559, 1379, 1619, 1843, 2003, 2323
BseYI CCCAGC 1 cut(s) 635
BsgI GTGCAG 2 cut(s) 1274, 2193
Bsh1236I CGCG 2 cut(s) 761, 878
Bsh1285I CGRYCG 1 cut(s) 16
BshFI GGCC 7 cut(s) 779, 1385, 1392, 1566, 1644, 1787, 2025
BshNI GGYRCC 1 cut(s) 1931
BsiEI CGRYCG 1 cut(s) 16
BsiHKAI GWGCWC 2 cut(s) 1849, 2269
BsiHKCI CYCGRG 2 cut(s) 445, 2281
BsiSI CCGG 5 cut(s) 232, 1110, 1349, 1935, 2282
BslFI GGGAC 1 cut(s) 2083
BslI CCNNNNNNNGG 6 cut(s) 199, 342, 775, 801, 1573, 1735
BsmAI GTCTC 4 cut(s) 213, 555, 1075, 1531
BsmBI CGTCTC 1 cut(s) 1075
BsmFI GGGAC 1 cut(s) 2083
BsmI GAATGC 5 cut(s) 129, 628, 718, 1184, 1512
BsnI GGCC 7 cut(s) 779, 1385, 1392, 1566, 1644, 1787, 2025
Bso31I GGTCTC 1 cut(s) 213
BsoBI CYCGRG 2 cut(s) 445, 2281
Bsp1286I GDGCHC 4 cut(s) 507, 1849, 2269, 2282
Bsp1407I TGTACA 1 cut(s) 1962
Bsp1720I GCTNAGC 1 cut(s) 764
Bsp19I CCATGG 2 cut(s) 1332, 1393
BspACI CCGC 5 cut(s) 12, 698, 731, 1516, 2314
BspANI GGCC 7 cut(s) 779, 1385, 1392, 1566, 1644, 1787, 2025
BspCNI CTCAG 5 cut(s) 756, 1062, 1256, 2128, 2268
BspFNI CGCG 2 cut(s) 761, 878
BspLI GGNNCC 5 cut(s) 320, 1209, 1384, 1933, 2225
BspMAI CTGCAG 1 cut(s) 673
BspMI ACCTGC 1 cut(s) 1328
BspPI GGATC 9 cut(s) 1202, 1215, 1310, 1471, 1767, 1930, 2025, 2218, 2231
BspQI GCTCTTC 1 cut(s) 2274
BspT107I GGYRCC 1 cut(s) 1931
BspTI CTTAAG 2 cut(s) 1511, 2027
BspTNI GGTCTC 1 cut(s) 213
BsrBI CCGCTC 1 cut(s) 698
BsrDI GCAATG 3 cut(s) 903, 978, 2253
BsrFI RCCGGY 2 cut(s) 1109, 1348
BsrGI TGTACA 1 cut(s) 1962
BsrI ACTGG 4 cut(s) 399, 1035, 1697, 1780
BssAI RCCGGY 2 cut(s) 1109, 1348
BssECI CCNNGG 8 cut(s) 769, 1332, 1393, 1567, 1730, 1788, 2281, 2282
BssNI GRCGYC 1 cut(s) 516
BssSI CACGAG 1 cut(s) 1020
BssT1I CCWWGG 5 cut(s) 769, 1332, 1393, 1567, 1730
Bst2BI CACGAG 1 cut(s) 1020
Bst2UI CCWGG 2 cut(s) 1903, 2040
Bst6I CTCTTC 5 cut(s) 93, 216, 2027, 2202, 2274
BstACI GRCGYC 1 cut(s) 516
BstAFI CTTAAG 2 cut(s) 1511, 2027
BstAPI GCANNNNNTGC 1 cut(s) 1853
BstAUI TGTACA 1 cut(s) 1962
BstBAI YACGTR 1 cut(s) 420
BstDEI CTNAG 6 cut(s) 764, 827, 1070, 1243, 2115, 2276
BstDSI CCRYGG 2 cut(s) 1332, 1393
BstF5I GGATG 7 cut(s) 1143, 1578, 1740, 1990, 2048, 2101, 2166
BstFNI CGCG 2 cut(s) 761, 878
BstH2I RGCGCY 1 cut(s) 461
BstHHI GCGC 9 cut(s) 65, 460, 577, 751, 763, 838, 941, 1795, 1996
BstMAI GTCTC 4 cut(s) 213, 555, 1075, 1531
BstMCI CGRYCG 1 cut(s) 16
BstMWI GCNNNNNNNGC 9 cut(s) 623, 632, 704, 713, 1106, 1274, 1334, 1853, 2264
BstNI CCWGG 2 cut(s) 1903, 2040
BstNSI RCATGY 7 cut(s) 388, 444, 491, 1459, 1816, 1863, 2000
BstSCI CCNGG 5 cut(s) 230, 1901, 2038, 2280, 2281
BstSFI CTRYAG 2 cut(s) 669, 1422
BstSLI GKGCMC 1 cut(s) 1849
BstUI CGCG 2 cut(s) 761, 878
BstV1I GCAGC 6 cut(s) 559, 1379, 1619, 1843, 2003, 2323
BstX2I RGATCY 5 cut(s) 1207, 1476, 1759, 1922, 2223
BstYI RGATCY 5 cut(s) 1207, 1476, 1759, 1922, 2223
BsuI GTATCC 1 cut(s) 1513
BsuRI GGCC 7 cut(s) 779, 1385, 1392, 1566, 1644, 1787, 2025
BtgI CCRYGG 2 cut(s) 1332, 1393
BtgZI GCGATG 1 cut(s) 944
BtrI CACGTC 1 cut(s) 820
BtsCI GGATG 7 cut(s) 1143, 1578, 1740, 1990, 2048, 2101, 2166
BtsI GCAGTG 2 cut(s) 528, 666
BtsIMutI CAGTG 7 cut(s) 528, 666, 869, 1028, 1677, 1690, 2416
BveI ACCTGC 1 cut(s) 1328
CfoI GCGC 9 cut(s) 65, 460, 577, 751, 763, 838, 941, 1795, 1996
Cfr10I RCCGGY 2 cut(s) 1109, 1348
Cfr13I GGNCC 3 cut(s) 350, 1383, 1945
Cfr9I CCCGGG 1 cut(s) 2281
CpoI CGGWCCG 1 cut(s) 350
CspI CGGWCCG 1 cut(s) 350
DdeI CTNAG 6 cut(s) 764, 827, 1070, 1243, 2115, 2276
DraI TTTAAA 1 cut(s) 1122
EaeI YGGCCR 2 cut(s) 1390, 1785
Eam1104I CTCTTC 5 cut(s) 93, 216, 2027, 2202, 2274
EarI CTCTTC 5 cut(s) 93, 216, 2027, 2202, 2274
Ecl136II GAGCTC 1 cut(s) 2267
Eco130I CCWWGG 5 cut(s) 769, 1332, 1393, 1567, 1730
Eco147I AGGCCT 1 cut(s) 2025
Eco24I GRGCYC 3 cut(s) 507, 2269, 2282
Eco31I GGTCTC 1 cut(s) 213
Eco47I GGWCC 2 cut(s) 350, 1945
Eco53kI GAGCTC 1 cut(s) 2267
Eco57I CTGAAG 2 cut(s) 1701, 1947
Eco88I CYCGRG 2 cut(s) 445, 2281
EcoICRI GAGCTC 1 cut(s) 2267
EcoO109I RGGNCCY 1 cut(s) 1383
EcoRII CCWGG 2 cut(s) 1901, 2038
EcoT14I CCWWGG 5 cut(s) 769, 1332, 1393, 1567, 1730
EcoT22I ATGCAT 4 cut(s) 343, 786, 1186, 1754
EcoT38I GRGCYC 3 cut(s) 507, 2269, 2282
ErhI CCWWGG 5 cut(s) 769, 1332, 1393, 1567, 1730
Esp3I CGTCTC 1 cut(s) 1075
FalI AAGNNNNNCTT 2 cut(s) 1266, 1298
FaqI GGGAC 1 cut(s) 2083
FauI CCCGC 3 cut(s) 691, 1509, 2307
FauNDI CATATG 2 cut(s) 943, 1748
FblI GTMKAC 1 cut(s) 2148
Fnu4HI GCNGC 6 cut(s) 573, 1368, 1608, 1857, 1992, 2337
FokI GGATG 7 cut(s) 1130, 1585, 1747, 1997, 2055, 2088, 2173
FriOI GRGCYC 3 cut(s) 507, 2269, 2282
Fsp4HI GCNGC 6 cut(s) 573, 1368, 1608, 1857, 1992, 2337
FspBI CTAG 4 cut(s) 59, 227, 2144, 2249
FspI TGCGCA 2 cut(s) 576, 750
GlaI GCGC 9 cut(s) 64, 459, 576, 750, 762, 837, 940, 1794, 1995
GluI GCNGC 6 cut(s) 573, 1368, 1608, 1857, 1992, 2337
GsaI CCCAGC 1 cut(s) 639
HaeII RGCGCY 1 cut(s) 461
HaeIII GGCC 7 cut(s) 779, 1385, 1392, 1566, 1644, 1787, 2025
HapII CCGG 5 cut(s) 232, 1110, 1349, 1935, 2282
HhaI GCGC 9 cut(s) 65, 460, 577, 751, 763, 838, 941, 1795, 1996
Hin1I GRCGYC 1 cut(s) 516
Hin6I GCGC 9 cut(s) 63, 458, 575, 749, 761, 836, 939, 1793, 1994
HinP1I GCGC 9 cut(s) 63, 458, 575, 749, 761, 836, 939, 1793, 1994
HindIII AAGCTT 1 cut(s) 1275
HinfI GANTC 8 cut(s) 885, 956, 1558, 1708, 2035, 2071, 2108, 2392
HpaII CCGG 5 cut(s) 232, 1110, 1349, 1935, 2282
HphI GGTGA 4 cut(s) 674, 1009, 2080, 2336
Hpy166II GTNNAC 6 cut(s) 417, 874, 1358, 1847, 1870, 2149
Hpy188I TCNGA 7 cut(s) 514, 1046, 1071, 1927, 2003, 2118, 2277
Hpy188III TCNNGA 6 cut(s) 473, 907, 1319, 1712, 2056, 2105
Hpy8I GTNNAC 6 cut(s) 417, 874, 1358, 1847, 1870, 2149
Hpy99I CGWCG 3 cut(s) 33, 284, 1628
HpyAV CCTTC 4 cut(s) 769, 1676, 1922, 2008
HpyCH4IV ACGT 4 cut(s) 419, 465, 516, 819
HpyF10VI GCNNNNNNNGC 9 cut(s) 623, 632, 704, 713, 1106, 1274, 1334, 1853, 2264
HpyF3I CTNAG 6 cut(s) 764, 827, 1070, 1243, 2115, 2276
HpySE526I ACGT 4 cut(s) 419, 465, 516, 819
Hsp92I GRCGYC 1 cut(s) 516
HspAI GCGC 9 cut(s) 63, 458, 575, 749, 761, 836, 939, 1793, 1994
KpnI GGTACC 1 cut(s) 1935
KroI GCCGGC 1 cut(s) 1348
KroNI GCCGGC 1 cut(s) 1350
LguI GCTCTTC 1 cut(s) 2274
LmnI GCTCC 2 cut(s) 1035, 2264
Lsp1109I GCAGC 6 cut(s) 559, 1379, 1619, 1843, 2003, 2323
LweI GCATC 3 cut(s) 883, 1171, 1978
MaeI CTAG 4 cut(s) 59, 227, 2144, 2249
MaeII ACGT 4 cut(s) 419, 465, 516, 819
MaeIII GTNAC 8 cut(s) 101, 662, 788, 1024, 1630, 1675, 2299, 2359
MbiI CCGCTC 1 cut(s) 698
MboII GAAGA 9 cut(s) 80, 203, 728, 1486, 1754, 1904, 2044, 2219, 2261
MfeI CAATTG 1 cut(s) 1404
MflI RGATCY 5 cut(s) 1207, 1476, 1759, 1922, 2223
MhlI GDGCHC 4 cut(s) 507, 1849, 2269, 2282
MlsI TGGCCA 1 cut(s) 1392
MluNI TGGCCA 1 cut(s) 1392
MlyI GAGTC 3 cut(s) 1717, 2044, 2401
MmeI TCCRAC 1 cut(s) 902
Mox20I TGGCCA 1 cut(s) 1392
Mph1103I ATGCAT 4 cut(s) 343, 786, 1186, 1754
MroNI GCCGGC 1 cut(s) 1348
MscI TGGCCA 1 cut(s) 1392
MseI TTAA 8 cut(s) 402, 1104, 1121, 1448, 1512, 2007, 2028, 2061
MslI CAYNNNNRTG 4 cut(s) 486, 1095, 1751, 2409
Msp20I TGGCCA 1 cut(s) 1392
MspA1I CMGCKG 1 cut(s) 1610
MspCI CTTAAG 2 cut(s) 1511, 2027
MspI CCGG 5 cut(s) 232, 1110, 1349, 1935, 2282
MspR9I CCNGG 5 cut(s) 232, 1903, 2040, 2282, 2283
MunI CAATTG 1 cut(s) 1404
Mva1269I GAATGC 5 cut(s) 129, 628, 718, 1184, 1512
MvaI CCWGG 2 cut(s) 1903, 2040
MvnI CGCG 2 cut(s) 761, 878
MwoI GCNNNNNNNGC 9 cut(s) 623, 632, 704, 713, 1106, 1274, 1334, 1853, 2264
NaeI GCCGGC 1 cut(s) 1350
NciI CCSGG 3 cut(s) 232, 2282, 2283
NcoI CCATGG 2 cut(s) 1332, 1393
NdeI CATATG 2 cut(s) 943, 1748
NgoMIV GCCGGC 1 cut(s) 1348
NlaIV GGNNCC 5 cut(s) 320, 1209, 1384, 1933, 2225
NmeAIII GCCGAG 3 cut(s) 296, 486, 1813
NmuCI GTSAC 3 cut(s) 662, 1630, 1675
NsbI TGCGCA 2 cut(s) 576, 750
NsiI ATGCAT 4 cut(s) 343, 786, 1186, 1754
NspI RCATGY 7 cut(s) 388, 444, 491, 1459, 1816, 1863, 2000
PaeI GCATGC 3 cut(s) 388, 444, 1816
PaqCI CACCTGC 1 cut(s) 1328
PceI AGGCCT 1 cut(s) 2025
PciI ACATGT 1 cut(s) 1455
PciSI GCTCTTC 1 cut(s) 2274
PcsI WCGNNNNNNNCGW 2 cut(s) 396, 513
PctI GAATGC 5 cut(s) 129, 628, 718, 1184, 1512
PdiI GCCGGC 1 cut(s) 1350
PfeI GAWTC 5 cut(s) 885, 956, 1558, 2071, 2108
PfoI TCCNGGA 2 cut(s) 1901, 2038
PkrI GCNGC 6 cut(s) 574, 1369, 1609, 1858, 1993, 2338
PleI GAGTC 3 cut(s) 1716, 2043, 2400
PpsI GAGTC 3 cut(s) 1716, 2043, 2400
Ppu21I YACGTR 1 cut(s) 420
PscI ACATGT 1 cut(s) 1455
PshBI ATTAAT 1 cut(s) 2061
PsiI TTATAA 1 cut(s) 179
Psp124BI GAGCTC 1 cut(s) 2269
Psp6I CCWGG 2 cut(s) 1901, 2038
PspFI CCCAGC 1 cut(s) 635
PspGI CCWGG 2 cut(s) 1901, 2038
PspN4I GGNNCC 5 cut(s) 320, 1209, 1384, 1933, 2225
PspPI GGNCC 3 cut(s) 350, 1383, 1945
PstI CTGCAG 1 cut(s) 673
PsuI RGATCY 5 cut(s) 1207, 1476, 1759, 1922, 2223
PvuII CAGCTG 1 cut(s) 1610
RseI CAYNNNNRTG 4 cut(s) 486, 1095, 1751, 2409
Rsr2I CGGWCCG 1 cut(s) 350
RsrII CGGWCCG 1 cut(s) 350
SacI GAGCTC 1 cut(s) 2269
SapI GCTCTTC 1 cut(s) 2274
SaqAI TTAA 8 cut(s) 402, 1104, 1121, 1448, 1512, 2007, 2028, 2061
SatI GCNGC 6 cut(s) 573, 1368, 1608, 1857, 1992, 2337
Sau96I GGNCC 3 cut(s) 350, 1383, 1945
ScaI AGTACT 1 cut(s) 832
SchI GAGTC 3 cut(s) 1717, 2044, 2401
ScrFI CCNGG 5 cut(s) 232, 1903, 2040, 2282, 2283
SduI GDGCHC 4 cut(s) 507, 1849, 2269, 2282
SfaNI GCATC 3 cut(s) 883, 1171, 1978
SfcI CTRYAG 2 cut(s) 669, 1422
SinI GGWCC 2 cut(s) 350, 1945
SmaI CCCGGG 1 cut(s) 2283
SmiI ATTTAAAT 1 cut(s) 1122
SmiMI CAYNNNNRTG 4 cut(s) 486, 1095, 1751, 2409
SmlI CTYRAG 4 cut(s) 150, 434, 1511, 2027
SmoI CTYRAG 4 cut(s) 150, 434, 1511, 2027
SphI GCATGC 3 cut(s) 388, 444, 1816
SseBI AGGCCT 1 cut(s) 2025
SsiI CCGC 5 cut(s) 12, 698, 731, 1516, 2314
SspI AATATT 1 cut(s) 1879
SspMI CTAG 4 cut(s) 59, 227, 2144, 2249
SstI GAGCTC 1 cut(s) 2269
StuI AGGCCT 1 cut(s) 2025
StyD4I CCNGG 5 cut(s) 230, 1901, 2038, 2280, 2281
StyI CCWWGG 5 cut(s) 769, 1332, 1393, 1567, 1730
SwaI ATTTAAAT 1 cut(s) 1122
TaiI ACGT 4 cut(s) 422, 468, 519, 822
TaqI TCGA 8 cut(s) 133, 198, 279, 390, 1463, 1500, 1834, 2055
TatI WGTACW 6 cut(s) 375, 414, 830, 1087, 1458, 1962
TfiI GAWTC 5 cut(s) 885, 956, 1558, 2071, 2108
Tru1I TTAA 8 cut(s) 402, 1104, 1121, 1448, 1512, 2007, 2028, 2061
Tru9I TTAA 8 cut(s) 402, 1104, 1121, 1448, 1512, 2007, 2028, 2061
TscAI CASTG 7 cut(s) 535, 673, 869, 1035, 1684, 1697, 2416
TseFI GTSAC 3 cut(s) 662, 1630, 1675
TseI GCWGC 6 cut(s) 572, 1367, 1607, 1856, 1991, 2336
Tsp45I GTSAC 3 cut(s) 662, 1630, 1675
TspGWI ACGGA 1 cut(s) 363
TspMI CCCGGG 1 cut(s) 2281
TspRI CASTG 7 cut(s) 535, 673, 869, 1035, 1684, 1697, 2416
Vha464I CTTAAG 2 cut(s) 1511, 2027
VneI GTGCAC 1 cut(s) 1845
VpaK11BI GGWCC 2 cut(s) 350, 1945
VspI ATTAAT 1 cut(s) 2061
XapI RAATTY 2 cut(s) 285, 1939
XceI RCATGY 7 cut(s) 388, 444, 491, 1459, 1816, 1863, 2000
XcmI CCANNNNNNNNNTGG 1 cut(s) 2046
XmaI CCCGGG 1 cut(s) 2281
XmiI GTMKAC 1 cut(s) 2148
XspI CTAG 4 cut(s) 59, 227, 2144, 2249
ZraI GACGTC 1 cut(s) 517
ZrmI AGTACT 1 cut(s) 832
Zsp2I ATGCAT 4 cut(s) 343, 786, 1186, 1754
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.