MD15G1143100.v1.1

La-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0012384
Physical Location & Seq
Forward (+)
10574352 .. 10577842
3491 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1143100.v1.1.491

Sequence Viewer

Length: 1473 bp
ATGGCACAGGGTGAATCCCCGTCGTCCGATTCTCTATCAGATCCATCCCTATCCCGAAACGTTTCCTTCAGTCGCCTCAACGCCCAGGCCGCCGAGTTCGTCCCCAATCGCACCCCCACTGCGCCAGCATCCGCACCGGCAGCGCCTCCTGCGGCTGTGGGTCAAGTCCACGTTTACCCTCCGCCGCCGGCGCCGCCGCCTTCGGGCCCCTTCCATGTTCCGATCCAGGTCGTCCCTCCTCCTCCTCCTCCACCTCACACGGTGCCGGGCCCAGTTCATCATCATCATCACTTGCCGGTCCAGTACCATCATCACCACCAGTATCATTACTCTGGATTTGGAGACCAGGAACTGGCCGTGCAGCAGAAACAGAAGCATCAGCATCATCAGCAGCAGTTGGGCGAGCAATCTCAGGCGGATCATGCTTCCTCCTCCTCCTCCAAGACTCACAAGCTTTCCGATGAAGCCACCTCCAAGATATTGAATCAGGTGGAGTATTATTTCAGCGATTTAAACTTGGCTACTACTGATCATCTTATGAGGTTCATAAACAAAGATCCTGAAGGATATGTGCCGATCTCTGTTGTTGCATCTTTCAAGAAGATTAAGGCCCTTGTAAATAGTAATTCCCAGCTTGCAAGCATATTGCGCAACTCTTCAAAGCTGGTAGTTCATGAAGATGGAAAGAAAGTTAGACGTCAGCATCCCCTGACTCAGTTAGATATGGACGAATTGCAATCTCGCATAGTTGTCGCTGAAAATTTGCCTGAGGACCATTGCCACCAAAACCTCATGAAGGTGTTCTCTGCTGCTGGGAGTGTGAAGACAATCCGGACCTGCCAGCCACAAGCCTCCAATAGTGGTGCTTCCTCGGCATCCCGATCTGCAAAAGCAGATGGCATGCTTTTCAGTAACAAGTTACATGCATTTGTGGAATATGAATCCCCTGAGATAGCGGAGAAAGCTGTTGCAGAGCTTAATGATGAGGCAAACTGGAGGAGTGGCCTTAGAGTCCGTTTAATGCTTAGACGAGCGTCAAAACCTGTTCAAGTGTGGGGGAAGAAGGGGCAGGATGGGGAAGTGCAGTTAGAGGAAGAAGATGCTTCTACAGCTGAACAACAGGCAAATGAGAAACACTTAGTAGATTCTTCCCAACAGTCAAATGTCCATCCACACGAACACAAAGAGAGAACAAACTCATTGAAATATGGAGAGGAGCATGGCAATGACAAGGATGTTGGGCAGAGAAAAGGGCGTAATAAAGGCCGTGTCAAGGGGCGTGGGCGAGGTCAATACCATCAGAACCATCATAATATTAATCGTGGAAATCATGCGGGGCATCCTCCTAACAATTCAGTTGGGAGTACGGAGCAGGCAGTTCTAACCAAGCAGCCTCCCGGGCCGCGTATGCCTGACGGCACAAGGGGATTTGCAATGGGTCGGGGAAAGCCAGCTACTGTTAATATTGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
La PAM2 RRM_1

Protein Analysis

491

Amino Acids

53.79

Weight (kDa)

9.05

Isoelectric Point (pI)

52.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
La PF05383 160 - 218 3.3e-20 La domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012384)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G43970 AT2G43970
fragaria_vesca FvH4_1g00200
malus_domestica MD00G1087300.v1.1 MD15G1143100.v1.1
prunus_persica Prupe.7G269900_v2.0.a1 Prupe.7G269900_v2.0.a1
pyrus_communis pycom15g12920 pycom290g00200
rosa_chinensis RchiOBHm_Chr2g0084471
rosa_laevigata RLG00000015621
rosa_multiflora Rmu_sc0009404.1_g000001
rosa_roxburghii Rroxscaffold_2G00156030
rosa_rugosa Rorug01G0454300
rosa_samantha Rh2AG002400 Rh2BG002000 Rh2CG002500 Rh2DG002500
rosa_wichuraiana Rw2G000210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 700
Acc16I TGCGCA 1 cut(s) 650
Acc36I ACCTGC 1 cut(s) 845
AccB1I GGYRCC 2 cut(s) 190, 262
AccB7I CCANNNNNTGG 1 cut(s) 352
AccII CGCG 1 cut(s) 1405
AccIII TCCGGA 1 cut(s) 831
AclI AACGTT 1 cut(s) 60
AclWI GGATC 4 cut(s) 35, 217, 426, 551
AcoI YGGCCR 1 cut(s) 354
AcsI RAATTY 1 cut(s) 760
AcuI CTGAAG 2 cut(s) 52, 582
AcyI GRCGYC 2 cut(s) 191, 697
AdeI CACNNNGTG 2 cut(s) 11, 262
AfaI GTAC 2 cut(s) 305, 1366
AfiI CCNNNNNNNGG 4 cut(s) 203, 352, 796, 1273
AgsI TTSAA 5 cut(s) 484, 598, 660, 1049, 1204
AjnI CCWGG 3 cut(s) 84, 225, 345
AluBI AGCT 7 cut(s) 454, 634, 664, 965, 976, 1112, 1454
AluI AGCT 7 cut(s) 454, 634, 664, 965, 976, 1112, 1454
Alw26I GTCTC 1 cut(s) 336
AlwI GGATC 4 cut(s) 35, 217, 426, 551
AlwNI CAGNNNCTG 2 cut(s) 352, 1457
Ama87I CYCGRG 1 cut(s) 1397
Aor13HI TCCGGA 1 cut(s) 831
AoxI GGCC 8 cut(s) 87, 205, 268, 354, 609, 1003, 1264, 1400
ApaI GGGCCC 2 cut(s) 209, 272
ApeKI GCWGC 5 cut(s) 140, 361, 391, 809, 1390
ApoI RAATTY 1 cut(s) 760
AseI ATTAAT 1 cut(s) 1317
Asp700I GAANNNNTTC 2 cut(s) 61, 800
AspLEI GCGC 4 cut(s) 124, 145, 193, 651
AspS9I GGNCC 9 cut(s) 205, 206, 268, 269, 298, 610, 772, 834, 1400
AsuC2I CCSGG 3 cut(s) 267, 1398, 1399
AsuHPI GGTGA 2 cut(s) 23, 305
AvaI CYCGRG 1 cut(s) 1397
AvaII GGWCC 3 cut(s) 298, 772, 834
AxyI CCTNAGG 1 cut(s) 768
BaeGI GKGCMC 2 cut(s) 209, 272
BanI GGYRCC 2 cut(s) 190, 262
BanII GRGCYC 2 cut(s) 209, 272
BbsI GAAGAC 1 cut(s) 830
BbvI GCAGC 5 cut(s) 152, 373, 403, 796, 1402
BccI CCATC 8 cut(s) 52, 315, 674, 890, 1067, 1176, 1305, 1314
BceAI ACGGC 3 cut(s) 341, 1251, 1432
BcgI CGANNNNNNTGC 2 cut(s) 733, 767
BciT130I CCWGG 3 cut(s) 86, 227, 347
BclI TGATCA 1 cut(s) 529
BcnI CCSGG 3 cut(s) 267, 1398, 1399
BcoDI GTCTC 1 cut(s) 336
BfmI CTRYAG 1 cut(s) 1107
BfoI RGCGCY 2 cut(s) 146, 194
BfuAI ACCTGC 1 cut(s) 845
BglI GCCNNNNNGGC 1 cut(s) 1399
Bme1390I CCNGG 6 cut(s) 86, 227, 267, 347, 1398, 1399
Bme18I GGWCC 3 cut(s) 298, 772, 834
BmeT110I CYCGRG 1 cut(s) 1397
BmgT120I GGNCC 9 cut(s) 205, 206, 268, 269, 298, 610, 772, 834, 1400
BmiI GGNNCC 5 cut(s) 192, 207, 208, 264, 270
BmrFI CCNGG 6 cut(s) 86, 227, 267, 347, 1398, 1399
BmrI ACTGGG 1 cut(s) 266
BmsI GCATC 8 cut(s) 137, 385, 391, 599, 712, 884, 1090, 1348
BmuI ACTGGG 1 cut(s) 266
BoxI GACNNNNGTC 1 cut(s) 1033
BpiI GAAGAC 1 cut(s) 830
BpmI CTGGAG 1 cut(s) 1015
BpuMI CCSGG 3 cut(s) 267, 1398, 1399
BsaHI GRCGYC 2 cut(s) 191, 697
BsaI GGTCTC 1 cut(s) 336
BsaJI CCNNGG 3 cut(s) 84, 870, 1397
BsaWI WCCGGW 1 cut(s) 831
Bsc4I CCNNNNNNNGG 4 cut(s) 203, 352, 796, 1273
Bse118I RCCGGY 3 cut(s) 136, 187, 295
Bse1I ACTGG 5 cut(s) 272, 301, 319, 357, 998
Bse21I CCTNAGG 1 cut(s) 768
Bse3DI GCAATG 3 cut(s) 775, 1231, 1440
BseAI TCCGGA 1 cut(s) 831
BseBI CCWGG 3 cut(s) 86, 227, 347
BseDI CCNNGG 3 cut(s) 84, 870, 1397
BseGI GGATG 8 cut(s) 44, 128, 703, 875, 1078, 1168, 1240, 1339
BseLI CCNNNNNNNGG 4 cut(s) 203, 352, 796, 1273
BseMI GCAATG 3 cut(s) 775, 1231, 1440
BseMII CTCAG 4 cut(s) 425, 728, 759, 939
BseNI ACTGG 5 cut(s) 272, 301, 319, 357, 998
BseRI GAGGAG 9 cut(s) 228, 231, 234, 237, 421, 424, 427, 1012, 1229
BseSI GKGCMC 2 cut(s) 209, 272
BseXI GCAGC 5 cut(s) 152, 373, 403, 796, 1402
BseYI CCCAGC 2 cut(s) 630, 812
BsgI GTGCAG 2 cut(s) 380, 1103
Bsh1236I CGCG 1 cut(s) 1405
BshFI GGCC 8 cut(s) 89, 207, 270, 356, 611, 1005, 1266, 1402
BshNI GGYRCC 2 cut(s) 190, 262
BsiHKCI CYCGRG 1 cut(s) 1397
BsiSI CCGG 6 cut(s) 137, 188, 266, 296, 832, 1398
BslFI GGGAC 2 cut(s) 86, 218
BslI CCNNNNNNNGG 4 cut(s) 203, 352, 796, 1273
BsmAI GTCTC 1 cut(s) 336
BsmFI GGGAC 2 cut(s) 86, 218
BsnI GGCC 8 cut(s) 89, 207, 270, 356, 611, 1005, 1266, 1402
Bso31I GGTCTC 1 cut(s) 336
BsoBI CYCGRG 1 cut(s) 1397
Bsp120I GGGCCC 2 cut(s) 205, 268
Bsp1286I GDGCHC 2 cut(s) 209, 272
Bsp13I TCCGGA 1 cut(s) 831
Bsp143I GATC 7 cut(s) 40, 222, 418, 529, 556, 576, 881
BspANI GGCC 8 cut(s) 89, 207, 270, 356, 611, 1005, 1266, 1402
BspCNI CTCAG 4 cut(s) 424, 727, 760, 940
BspEI TCCGGA 1 cut(s) 831
BspFNI CGCG 1 cut(s) 1405
BspHI TCATGA 2 cut(s) 673, 792
BspLI GGNNCC 5 cut(s) 192, 207, 208, 264, 270
BspMI ACCTGC 1 cut(s) 845
BspPI GGATC 4 cut(s) 35, 217, 426, 551
BspT107I GGYRCC 2 cut(s) 190, 262
BspTNI GGTCTC 1 cut(s) 336
BsrDI GCAATG 3 cut(s) 775, 1231, 1440
BsrFI RCCGGY 3 cut(s) 136, 187, 295
BsrI ACTGG 5 cut(s) 272, 301, 319, 357, 998
BssAI RCCGGY 3 cut(s) 136, 187, 295
BssECI CCNNGG 3 cut(s) 84, 870, 1397
BssMI GATC 7 cut(s) 40, 222, 418, 529, 556, 576, 881
BssNI GRCGYC 2 cut(s) 191, 697
Bst2UI CCWGG 3 cut(s) 86, 227, 347
Bst4CI ACNGT 3 cut(s) 262, 1158, 1459
Bst6I CTCTTC 1 cut(s) 661
BstACI GRCGYC 2 cut(s) 191, 697
BstC8I GCNNGC 9 cut(s) 126, 189, 404, 636, 640, 842, 902, 1374, 1452
BstDEI CTNAG 7 cut(s) 411, 714, 768, 948, 1007, 1025, 1138
BstENI CCTNNNNNAGG 1 cut(s) 794
BstF5I GGATG 8 cut(s) 44, 128, 703, 875, 1078, 1168, 1240, 1339
BstFNI CGCG 1 cut(s) 1405
BstH2I RGCGCY 2 cut(s) 146, 194
BstHHI GCGC 4 cut(s) 124, 145, 193, 651
BstKTI GATC 7 cut(s) 43, 225, 421, 532, 559, 579, 884
BstMAI GTCTC 1 cut(s) 336
BstMBI GATC 7 cut(s) 40, 222, 418, 529, 556, 576, 881
BstNI CCWGG 3 cut(s) 86, 227, 347
BstNSI RCATGY 2 cut(s) 904, 926
BstPAI GACNNNNGTC 1 cut(s) 1033
BstSCI CCNGG 6 cut(s) 84, 225, 265, 345, 1396, 1397
BstSFI CTRYAG 1 cut(s) 1107
BstSLI GKGCMC 2 cut(s) 209, 272
BstUI CGCG 1 cut(s) 1405
BstV1I GCAGC 5 cut(s) 152, 373, 403, 796, 1402
BstV2I GAAGAC 1 cut(s) 830
BstX2I RGATCY 2 cut(s) 40, 556
BstYI RGATCY 2 cut(s) 40, 556
Bsu36I CCTNAGG 1 cut(s) 768
BsuRI GGCC 8 cut(s) 89, 207, 270, 356, 611, 1005, 1266, 1402
BtsCI GGATG 8 cut(s) 44, 128, 703, 875, 1078, 1168, 1240, 1339
BtsI GCAGTG 1 cut(s) 117
BtsIMutI CAGTG 1 cut(s) 117
BveI ACCTGC 1 cut(s) 845
Cac8I GCNNGC 9 cut(s) 126, 189, 404, 636, 640, 842, 902, 1374, 1452
CaiI CAGNNNCTG 2 cut(s) 352, 1457
CciI TCATGA 2 cut(s) 673, 792
CfoI GCGC 4 cut(s) 124, 145, 193, 651
Cfr10I RCCGGY 3 cut(s) 136, 187, 295
Cfr13I GGNCC 9 cut(s) 205, 206, 268, 269, 298, 610, 772, 834, 1400
Cfr9I CCCGGG 1 cut(s) 1397
CseI GACGC 1 cut(s) 1023
Csp6I GTAC 2 cut(s) 304, 1365
CspCI CAANNNNNGTGG 2 cut(s) 1261, 1296
CviAII CATG 8 cut(s) 215, 422, 674, 793, 901, 923, 1220, 1331
CviQI GTAC 2 cut(s) 304, 1365
DdeI CTNAG 7 cut(s) 411, 714, 768, 948, 1007, 1025, 1138
DinI GGCGCC 1 cut(s) 192
DpnI GATC 7 cut(s) 42, 224, 420, 531, 558, 578, 883
DpnII GATC 7 cut(s) 40, 222, 418, 529, 556, 576, 881
DraI TTTAAA 1 cut(s) 513
DraIII CACNNNGTG 2 cut(s) 11, 262
EaeI YGGCCR 1 cut(s) 354
Eam1104I CTCTTC 1 cut(s) 661
EarI CTCTTC 1 cut(s) 661
EciI GGCGGA 2 cut(s) 171, 431
Eco24I GRGCYC 2 cut(s) 209, 272
Eco31I GGTCTC 1 cut(s) 336
Eco47I GGWCC 3 cut(s) 298, 772, 834
Eco57I CTGAAG 2 cut(s) 52, 582
Eco81I CCTNAGG 1 cut(s) 768
Eco88I CYCGRG 1 cut(s) 1397
EcoNI CCTNNNNNAGG 1 cut(s) 794
EcoO109I RGGNCCY 2 cut(s) 206, 610
EcoRII CCWGG 3 cut(s) 84, 225, 345
EcoT22I ATGCAT 1 cut(s) 928
EcoT38I GRGCYC 2 cut(s) 209, 272
EgeI GGCGCC 1 cut(s) 192
EheI GGCGCC 1 cut(s) 192
FaeI CATG 8 cut(s) 218, 425, 677, 796, 904, 926, 1223, 1334
FaqI GGGAC 2 cut(s) 86, 218
FatI CATG 8 cut(s) 214, 421, 673, 792, 900, 922, 1219, 1330
FauI CCCGC 1 cut(s) 1327
FbaI TGATCA 1 cut(s) 529
FokI GGATG 8 cut(s) 31, 115, 690, 862, 1085, 1155, 1247, 1326
FriOI GRGCYC 2 cut(s) 209, 272
FspI TGCGCA 1 cut(s) 650
GlaI GCGC 4 cut(s) 123, 144, 192, 650
GsaI CCCAGC 2 cut(s) 634, 816
GsuI CTGGAG 1 cut(s) 1015
HaeII RGCGCY 2 cut(s) 146, 194
HaeIII GGCC 8 cut(s) 89, 207, 270, 356, 611, 1005, 1266, 1402
HapII CCGG 6 cut(s) 137, 188, 266, 296, 832, 1398
HgaI GACGC 1 cut(s) 1023
HhaI GCGC 4 cut(s) 124, 145, 193, 651
Hin1I GRCGYC 2 cut(s) 191, 697
Hin1II CATG 8 cut(s) 218, 425, 677, 796, 904, 926, 1223, 1334
Hin6I GCGC 4 cut(s) 122, 143, 191, 649
HinP1I GCGC 4 cut(s) 122, 143, 191, 649
HindIII AAGCTT 1 cut(s) 452
HinfI GANTC 8 cut(s) 14, 29, 445, 484, 712, 941, 1011, 1145
HpaII CCGG 6 cut(s) 137, 188, 266, 296, 832, 1398
HphI GGTGA 2 cut(s) 23, 305
Hpy166II GTNNAC 2 cut(s) 169, 175
Hpy188I TCNGA 5 cut(s) 28, 40, 222, 460, 1302
Hpy188III TCNNGA 8 cut(s) 54, 333, 560, 598, 674, 793, 832, 879
Hpy8I GTNNAC 2 cut(s) 169, 175
Hpy99I CGWCG 1 cut(s) 25
HpyAV CCTTC 6 cut(s) 76, 210, 220, 557, 790, 1057
HpyCH4III ACNGT 3 cut(s) 262, 1158, 1459
HpyCH4IV ACGT 3 cut(s) 60, 171, 697
HpyCH4V TGCA 9 cut(s) 361, 590, 638, 736, 887, 926, 971, 1084, 1433
HpyF3I CTNAG 7 cut(s) 411, 714, 768, 948, 1007, 1025, 1138
HpySE526I ACGT 3 cut(s) 60, 171, 697
Hsp92I GRCGYC 2 cut(s) 191, 697
Hsp92II CATG 8 cut(s) 218, 425, 677, 796, 904, 926, 1223, 1334
HspAI GCGC 4 cut(s) 122, 143, 191, 649
KasI GGCGCC 1 cut(s) 190
Kpn2I TCCGGA 1 cut(s) 831
KroI GCCGGC 1 cut(s) 187
KroNI GCCGGC 1 cut(s) 189
Ksp22I TGATCA 1 cut(s) 529
Kzo9I GATC 7 cut(s) 40, 222, 418, 529, 556, 576, 881
LmnI GCTCC 2 cut(s) 1216, 1369
Lsp1109I GCAGC 5 cut(s) 152, 373, 403, 796, 1402
LweI GCATC 8 cut(s) 137, 385, 391, 599, 712, 884, 1090, 1348
MaeII ACGT 3 cut(s) 60, 171, 697
MaeIII GTNAC 2 cut(s) 911, 918
MalI GATC 7 cut(s) 42, 224, 420, 531, 558, 578, 883
MboI GATC 7 cut(s) 40, 222, 418, 529, 556, 576, 881
MboII GAAGA 8 cut(s) 613, 648, 689, 835, 1072, 1106, 1109, 1140
MflI RGATCY 2 cut(s) 40, 556
MhlI GDGCHC 2 cut(s) 209, 272
MluCI AATT 4 cut(s) 625, 731, 760, 1351
Mly113I GGCGCC 1 cut(s) 191
MlyI GAGTC 3 cut(s) 439, 706, 1020
Mph1103I ATGCAT 1 cut(s) 928
MreI CGCCGGCG 1 cut(s) 187
MroI TCCGGA 1 cut(s) 831
MroNI GCCGGC 1 cut(s) 187
MroXI GAANNNNTTC 2 cut(s) 61, 800
MseI TTAA 6 cut(s) 512, 606, 978, 1019, 1317, 1461
MslI CAYNNNNRTG 3 cut(s) 678, 797, 1224
MspA1I CMGCKG 1 cut(s) 1112
MspI CCGG 6 cut(s) 137, 188, 266, 296, 832, 1398
MspR9I CCNGG 6 cut(s) 86, 227, 267, 347, 1398, 1399
MvaI CCWGG 3 cut(s) 86, 227, 347
MvnI CGCG 1 cut(s) 1405
NaeI GCCGGC 1 cut(s) 189
NarI GGCGCC 1 cut(s) 191
NciI CCSGG 3 cut(s) 267, 1398, 1399
NdeII GATC 7 cut(s) 40, 222, 418, 529, 556, 576, 881
NgoMIV GCCGGC 1 cut(s) 187
NlaIII CATG 8 cut(s) 218, 425, 677, 796, 904, 926, 1223, 1334
NlaIV GGNNCC 5 cut(s) 192, 207, 208, 264, 270
NmeAIII GCCGAG 2 cut(s) 118, 851
NsbI TGCGCA 1 cut(s) 650
NsiI ATGCAT 1 cut(s) 928
NspI RCATGY 2 cut(s) 904, 926
PaeI GCATGC 1 cut(s) 904
PagI TCATGA 2 cut(s) 673, 792
PdiI GCCGGC 1 cut(s) 189
PdmI GAANNNNTTC 2 cut(s) 61, 800
PfeI GAWTC 5 cut(s) 14, 29, 484, 941, 1145
PflMI CCANNNNNTGG 1 cut(s) 352
PleI GAGTC 3 cut(s) 439, 706, 1019
PluTI GGCGCC 1 cut(s) 194
PpsI GAGTC 3 cut(s) 439, 706, 1019
PshAI GACNNNNGTC 1 cut(s) 1033
PshBI ATTAAT 1 cut(s) 1317
Psp1406I AACGTT 1 cut(s) 60
Psp6I CCWGG 3 cut(s) 84, 225, 345
PspFI CCCAGC 2 cut(s) 630, 812
PspGI CCWGG 3 cut(s) 84, 225, 345
PspN4I GGNNCC 5 cut(s) 192, 207, 208, 264, 270
PspOMI GGGCCC 2 cut(s) 205, 268
PspPI GGNCC 9 cut(s) 205, 206, 268, 269, 298, 610, 772, 834, 1400
PstNI CAGNNNCTG 2 cut(s) 352, 1457
PsuI RGATCY 2 cut(s) 40, 556
PvuII CAGCTG 1 cut(s) 1112
RsaI GTAC 2 cut(s) 305, 1366
RsaNI GTAC 2 cut(s) 304, 1365
RseI CAYNNNNRTG 3 cut(s) 678, 797, 1224
SaqAI TTAA 6 cut(s) 512, 606, 978, 1019, 1317, 1461
Sau3AI GATC 7 cut(s) 40, 222, 418, 529, 556, 576, 881
Sau96I GGNCC 9 cut(s) 205, 206, 268, 269, 298, 610, 772, 834, 1400
SchI GAGTC 3 cut(s) 439, 706, 1020
ScrFI CCNGG 6 cut(s) 86, 227, 267, 347, 1398, 1399
SduI GDGCHC 2 cut(s) 209, 272
SfaNI GCATC 8 cut(s) 137, 385, 391, 599, 712, 884, 1090, 1348
SfcI CTRYAG 1 cut(s) 1107
SfoI GGCGCC 1 cut(s) 192
SgrAI CRCCGGYG 1 cut(s) 187
SinI GGWCC 3 cut(s) 298, 772, 834
SmaI CCCGGG 1 cut(s) 1399
SmiMI CAYNNNNRTG 3 cut(s) 678, 797, 1224
SphI GCATGC 1 cut(s) 904
Sse9I AATT 4 cut(s) 625, 731, 760, 1351
SspDI GGCGCC 1 cut(s) 190
SspI AATATT 2 cut(s) 1315, 1465
StyD4I CCNGG 6 cut(s) 84, 225, 265, 345, 1396, 1397
TaaI ACNGT 3 cut(s) 262, 1158, 1459
TaiI ACGT 3 cut(s) 63, 174, 700
TasI AATT 4 cut(s) 625, 731, 760, 1351
TauI GCSGC 6 cut(s) 92, 155, 187, 196, 199, 1405
TfiI GAWTC 5 cut(s) 14, 29, 484, 941, 1145
Tru1I TTAA 6 cut(s) 512, 606, 978, 1019, 1317, 1461
Tru9I TTAA 6 cut(s) 512, 606, 978, 1019, 1317, 1461
TscAI CASTG 1 cut(s) 124
TseI GCWGC 5 cut(s) 140, 361, 391, 809, 1390
TspDTI ATGAA 7 cut(s) 266, 477, 535, 662, 690, 809, 954
TspGWI ACGGA 2 cut(s) 1004, 1382
TspMI CCCGGG 1 cut(s) 1397
TspRI CASTG 1 cut(s) 124
Van91I CCANNNNNTGG 1 cut(s) 352
VpaK11BI GGWCC 3 cut(s) 298, 772, 834
VspI ATTAAT 1 cut(s) 1317
XagI CCTNNNNNAGG 1 cut(s) 794
XapI RAATTY 1 cut(s) 760
XceI RCATGY 2 cut(s) 904, 926
XmaI CCCGGG 1 cut(s) 1397
XmnI GAANNNNTTC 2 cut(s) 61, 800
ZraI GACGTC 1 cut(s) 698
Zsp2I ATGCAT 1 cut(s) 928
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.