Prupe.7G269900_v2.0.a1

La-related protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
22153579 .. 22159098
5520 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G269900.2

Sequence Viewer

Length: 1422 bp
ATGGCCCAAGGGGAATCCCCACCGTCCGATTCTACATCAGATCCATCTCTGTCCCGGAACGTCTCGTTTAGCCGGCTGAACGCCCAGGCTCCCGAGTTCGTCCCAACCAATCGCAGTGGCAGCACACCCACATCTGGGCCCACACCCGCACCGGGGCCGGCAGCGCCTCCGGTGTCTGTGGGTCAGGTCCACGTCTACTCTCCGCCTTCGGTCCCTTTCCATGTGCCGATCCAGGTCGTCCCTCCTCCTCCTCCTCATGTGGTGCCGGTGCCTGTCCATCATCATCACTTGCCAGTCCAGTACCATCATCACCACCAGTATCATTACTCTGGATTTGGAGACCAAGAGGCGACCGTGCAGCACAAGCAGCAGCAGCAGCAGCTGGGAGAGCAAGCTCAGGCGGATCATGCTTCTTCCTCCTCCTCGAAGACTCACAAGCTTTCCGATGAAGCTACTTCCAAGATTTTGAATCAGGTGGAGTATTATTTCAGTGACCTAAACTTGGCTACTACTGATCATCTTATGAGGTTCATAAACAAAGACCCTGAAGGATTTGTGCCAATATCTGTTGTTGCATCTTTCAAGAAGATTAAGGCCCTCGTAAATAGTCAATCTCAGCTTGCAACTGTATTGCGGAACTCTTCAAAACTTGTAGTTCATGAAGATGGAAAGAAAGTTAGACGCCAGCATCCCCTGACTCAGTCAGATATGGAAGAGTTGCAATCTCGCATAGTAGTCGCTGAAAATTTGCCTGAGGATCATTGCCACCAAAACCTCATGAAGGTTTTCTCTGCTGCTGGGAGTGTGAAGACAATCCGTACCTGCCAGCCACAAACCTCCAATAGTAGTGCTTCCCCGGCATCCAGATCTACAAAAGCAGATAGCACGCTTTTCAGTAACAAGTTGCATGCATTTGTGGAATATGAATCCCCTGAGCTGGCAGAGAAAGCTGTTGCAGAGCTTAATGATGAGGCCAACTGGAGGAGTGGCCTTAAAGTCCGTTTAATGCTTAGACGAGTGTCAAAAGCTGCTCAAGTGCGGGGGAAAAAGGGGCAAGATGGGGAAGTGCAATTAGACGAAGAGGATGCTTCTTCACCGGAACAGCAGGCCAATGAAAAACAATCAGTAGATTCTTCCCAGCAGTCTGATGCCCATTCACATGAACATGGAGAGGAGCATGGCAATGACAAGGAGGTCGGGCAGAGGAAAGGGCGTAATCGAGGCCGTGGGAAGGGGCGTGGGCGAGGTCAATACCATCATAATACTAATCGTGGAAATCATGTGGGGCCTCCTCCTCACAATTTAGTTGGTAGTATTGAGCAGCCAGGAGTAGCCAAGCAGCCTCCTGGGCCGCGTATGCCGGATGGCACAAGGGGATTTGCAATGGGTCGGGGGAAGCCAGTTGCTGTTAATATTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

474

Amino Acids

51.58

Weight (kDa)

8.65

Isoelectric Point (pI)

58.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012384)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1193
Acc36I ACCTGC 1 cut(s) 830
AccB1I GGYRCC 2 cut(s) 262, 268
AccI GTMKAC 1 cut(s) 195
AccII CGCG 1 cut(s) 1354
AciI CCGC 6 cut(s) 147, 203, 401, 634, 1039, 1352
AclWI GGATC 4 cut(s) 35, 223, 411, 765
AcsI RAATTY 1 cut(s) 745
AcuI CTGAAG 1 cut(s) 567
AcyI GRCGYC 1 cut(s) 682
AfaI GTAC 2 cut(s) 302, 820
AfiI CCNNNNNNNGG 9 cut(s) 134, 135, 152, 153, 502, 781, 937, 981, 1231
AgsI TTSAA 3 cut(s) 469, 583, 645
AjiI CACGTC 1 cut(s) 193
AjnI CCWGG 4 cut(s) 84, 231, 1324, 1345
AluBI AGCT 9 cut(s) 382, 395, 439, 452, 619, 937, 950, 961, 1028
AluI AGCT 9 cut(s) 382, 395, 439, 452, 619, 937, 950, 961, 1028
Alw26I GTCTC 2 cut(s) 67, 333
AlwI GGATC 4 cut(s) 35, 223, 411, 765
AlwNI CAGNNNCTG 2 cut(s) 382, 1406
Ama87I CYCGRG 1 cut(s) 92
ApaI GGGCCC 1 cut(s) 141
ApoI RAATTY 1 cut(s) 745
Asp700I GAANNNNTTC 1 cut(s) 785
AspLEI GCGC 1 cut(s) 166
AspS9I GGNCC 9 cut(s) 4, 137, 138, 155, 187, 211, 595, 1286, 1349
AsuC2I CCSGG 3 cut(s) 55, 153, 857
AsuHPI GGTGA 2 cut(s) 302, 1086
AvaI CYCGRG 1 cut(s) 92
AvaII GGWCC 2 cut(s) 187, 211
AxyI CCTNAGG 1 cut(s) 753
BaeGI GKGCMC 1 cut(s) 141
BanI GGYRCC 2 cut(s) 262, 268
BanII GRGCYC 1 cut(s) 141
BbsI GAAGAC 2 cut(s) 434, 815
BccI CCATC 7 cut(s) 52, 285, 312, 659, 1052, 1263, 1358
BceAI ACGGC 1 cut(s) 1209
BcgI CGANNNNNNTGC 4 cut(s) 718, 752, 1067, 1101
BciT130I CCWGG 4 cut(s) 86, 233, 1326, 1347
BclI TGATCA 1 cut(s) 514
BcnI CCSGG 3 cut(s) 55, 153, 857
BcoDI GTCTC 2 cut(s) 67, 333
BfoI RGCGCY 1 cut(s) 167
BfuAI ACCTGC 1 cut(s) 830
BglI GCCNNNNNGGC 1 cut(s) 1348
BglII AGATCT 1 cut(s) 866
Bme1390I CCNGG 7 cut(s) 55, 86, 153, 233, 857, 1326, 1347
Bme18I GGWCC 2 cut(s) 187, 211
BmeT110I CYCGRG 1 cut(s) 92
BmgBI CACGTC 1 cut(s) 193
BmgT120I GGNCC 9 cut(s) 4, 137, 138, 155, 187, 211, 595, 1286, 1349
BmiI GGNNCC 7 cut(s) 90, 139, 156, 213, 264, 270, 1287
BmrFI CCNGG 7 cut(s) 55, 86, 153, 233, 857, 1326, 1347
BmsI GCATC 5 cut(s) 584, 697, 869, 1075, 1138
BoxI GACNNNNGTC 1 cut(s) 1018
BpiI GAAGAC 2 cut(s) 434, 815
BpmI CTGGAG 1 cut(s) 1000
Bpu10I CCTNAGC 2 cut(s) 396, 933
BpuEI CTTGAG 1 cut(s) 1017
BpuMI CCSGG 3 cut(s) 55, 153, 857
BsaHI GRCGYC 1 cut(s) 682
BsaI GGTCTC 1 cut(s) 333
BsaJI CCNNGG 6 cut(s) 7, 84, 152, 855, 1225, 1346
BsaWI WCCGGW 2 cut(s) 169, 1096
Bsc4I CCNNNNNNNGG 9 cut(s) 134, 135, 152, 153, 502, 781, 937, 981, 1231
Bse118I RCCGGY 3 cut(s) 72, 157, 265
Bse1I ACTGG 5 cut(s) 293, 298, 316, 983, 1400
Bse21I CCTNAGG 1 cut(s) 753
Bse3DI GCAATG 3 cut(s) 760, 1189, 1389
BseBI CCWGG 4 cut(s) 86, 233, 1326, 1347
BseDI CCNNGG 6 cut(s) 7, 84, 152, 855, 1225, 1346
BseGI GGATG 4 cut(s) 688, 860, 1090, 1369
BseLI CCNNNNNNNGG 9 cut(s) 134, 135, 152, 153, 502, 781, 937, 981, 1231
BseMI GCAATG 3 cut(s) 760, 1189, 1389
BseMII CTCAG 5 cut(s) 410, 629, 713, 744, 924
BseNI ACTGG 5 cut(s) 293, 298, 316, 983, 1400
BseSI GKGCMC 1 cut(s) 141
BseYI CCCAGC 3 cut(s) 382, 797, 1137
BsgI GTGCAG 1 cut(s) 377
Bsh1236I CGCG 1 cut(s) 1354
Bsh1285I CGRYCG 1 cut(s) 354
BshNI GGYRCC 2 cut(s) 262, 268
BsiEI CGRYCG 1 cut(s) 354
BsiHKCI CYCGRG 1 cut(s) 92
BsiSI CCGG 9 cut(s) 55, 73, 152, 158, 170, 266, 857, 1097, 1361
BslFI GGGAC 4 cut(s) 37, 86, 197, 224
BslI CCNNNNNNNGG 9 cut(s) 134, 135, 152, 153, 502, 781, 937, 981, 1231
BsmAI GTCTC 2 cut(s) 67, 333
BsmBI CGTCTC 1 cut(s) 67
BsmFI GGGAC 4 cut(s) 37, 86, 197, 224
Bso31I GGTCTC 1 cut(s) 333
BsoBI CYCGRG 1 cut(s) 92
Bsp120I GGGCCC 1 cut(s) 137
Bsp1286I GDGCHC 1 cut(s) 141
Bsp143I GATC 6 cut(s) 40, 228, 403, 514, 757, 866
BspACI CCGC 6 cut(s) 147, 203, 401, 634, 1039, 1352
BspCNI CTCAG 5 cut(s) 409, 628, 712, 745, 925
BspFNI CGCG 1 cut(s) 1354
BspHI TCATGA 2 cut(s) 658, 777
BspLI GGNNCC 7 cut(s) 90, 139, 156, 213, 264, 270, 1287
BspMI ACCTGC 1 cut(s) 830
BspPI GGATC 4 cut(s) 35, 223, 411, 765
BspT107I GGYRCC 2 cut(s) 262, 268
BspTNI GGTCTC 1 cut(s) 333
BsrDI GCAATG 3 cut(s) 760, 1189, 1389
BsrFI RCCGGY 3 cut(s) 72, 157, 265
BsrI ACTGG 5 cut(s) 293, 298, 316, 983, 1400
BssAI RCCGGY 3 cut(s) 72, 157, 265
BssECI CCNNGG 6 cut(s) 7, 84, 152, 855, 1225, 1346
BssMI GATC 6 cut(s) 40, 228, 403, 514, 757, 866
BssNI GRCGYC 1 cut(s) 682
BssT1I CCWWGG 1 cut(s) 7
Bst2UI CCWGG 4 cut(s) 86, 233, 1326, 1347
Bst4CI ACNGT 3 cut(s) 24, 355, 628
Bst6I CTCTTC 3 cut(s) 646, 708, 1074
BstACI GRCGYC 1 cut(s) 682
BstDEI CTNAG 6 cut(s) 396, 615, 699, 753, 933, 1010
BstDSI CCRYGG 1 cut(s) 1225
BstENI CCTNNNNNAGG 1 cut(s) 779
BstF5I GGATG 4 cut(s) 688, 860, 1090, 1369
BstFNI CGCG 1 cut(s) 1354
BstH2I RGCGCY 1 cut(s) 167
BstHHI GCGC 1 cut(s) 166
BstKTI GATC 6 cut(s) 43, 231, 406, 517, 760, 869
BstMAI GTCTC 2 cut(s) 67, 333
BstMBI GATC 6 cut(s) 40, 228, 403, 514, 757, 866
BstMCI CGRYCG 1 cut(s) 354
BstNI CCWGG 4 cut(s) 86, 233, 1326, 1347
BstNSI RCATGY 1 cut(s) 911
BstPAI GACNNNNGTC 1 cut(s) 1018
BstSCI CCNGG 7 cut(s) 53, 84, 151, 231, 855, 1324, 1345
BstSLI GKGCMC 1 cut(s) 141
BstUI CGCG 1 cut(s) 1354
BstV2I GAAGAC 2 cut(s) 434, 815
BstX2I RGATCY 2 cut(s) 40, 866
BstYI RGATCY 2 cut(s) 40, 866
Bsu36I CCTNAGG 1 cut(s) 753
BtgI CCRYGG 1 cut(s) 1225
BtrI CACGTC 1 cut(s) 193
BtsCI GGATG 4 cut(s) 688, 860, 1090, 1369
BtsI GCAGTG 1 cut(s) 121
BtsIMutI CAGTG 2 cut(s) 121, 496
BveI ACCTGC 1 cut(s) 830
CaiI CAGNNNCTG 2 cut(s) 382, 1406
CciI TCATGA 2 cut(s) 658, 777
CfoI GCGC 1 cut(s) 166
Cfr10I RCCGGY 3 cut(s) 72, 157, 265
Cfr13I GGNCC 9 cut(s) 4, 137, 138, 155, 187, 211, 595, 1286, 1349
CseI GACGC 1 cut(s) 690
Csp6I GTAC 2 cut(s) 301, 819
CspCI CAANNNNNGTGG 2 cut(s) 97, 132
CviQI GTAC 2 cut(s) 301, 819
DdeI CTNAG 6 cut(s) 396, 615, 699, 753, 933, 1010
DpnI GATC 6 cut(s) 42, 230, 405, 516, 759, 868
DpnII GATC 6 cut(s) 40, 228, 403, 514, 757, 866
DrdI GACNNNNNNGTC 1 cut(s) 1193
DseDI GACNNNNNNGTC 1 cut(s) 1193
Eam1104I CTCTTC 3 cut(s) 646, 708, 1074
EarI CTCTTC 3 cut(s) 646, 708, 1074
EciI GGCGGA 2 cut(s) 192, 416
Eco130I CCWWGG 1 cut(s) 7
Eco24I GRGCYC 1 cut(s) 141
Eco31I GGTCTC 1 cut(s) 333
Eco47I GGWCC 2 cut(s) 187, 211
Eco57I CTGAAG 1 cut(s) 567
Eco81I CCTNAGG 1 cut(s) 753
Eco88I CYCGRG 1 cut(s) 92
EcoNI CCTNNNNNAGG 1 cut(s) 779
EcoO109I RGGNCCY 2 cut(s) 595, 1286
EcoRII CCWGG 4 cut(s) 84, 231, 1324, 1345
EcoT14I CCWWGG 1 cut(s) 7
EcoT22I ATGCAT 1 cut(s) 913
EcoT38I GRGCYC 1 cut(s) 141
ErhI CCWWGG 1 cut(s) 7
Esp3I CGTCTC 1 cut(s) 67
FaqI GGGAC 4 cut(s) 37, 86, 197, 224
FauI CCCGC 2 cut(s) 154, 1032
FbaI TGATCA 1 cut(s) 514
FblI GTMKAC 1 cut(s) 195
FokI GGATG 4 cut(s) 675, 847, 1097, 1376
FriOI GRGCYC 1 cut(s) 141
GlaI GCGC 1 cut(s) 165
GsaI CCCAGC 3 cut(s) 386, 801, 1141
GsuI CTGGAG 1 cut(s) 1000
HaeII RGCGCY 1 cut(s) 167
HapII CCGG 9 cut(s) 55, 73, 152, 158, 170, 266, 857, 1097, 1361
HgaI GACGC 1 cut(s) 690
HhaI GCGC 1 cut(s) 166
Hin1I GRCGYC 1 cut(s) 682
Hin6I GCGC 1 cut(s) 164
HinP1I GCGC 1 cut(s) 164
HindIII AAGCTT 1 cut(s) 437
HinfI GANTC 7 cut(s) 14, 29, 430, 469, 697, 926, 1130
HpaII CCGG 9 cut(s) 55, 73, 152, 158, 170, 266, 857, 1097, 1361
HphI GGTGA 2 cut(s) 302, 1086
Hpy166II GTNNAC 2 cut(s) 190, 196
Hpy188I TCNGA 5 cut(s) 28, 40, 445, 706, 1147
Hpy188III TCNNGA 6 cut(s) 92, 330, 583, 659, 778, 864
Hpy8I GTNNAC 2 cut(s) 190, 196
HpyAV CCTTC 4 cut(s) 216, 542, 775, 1225
HpyCH4III ACNGT 3 cut(s) 24, 355, 628
HpyCH4IV ACGT 2 cut(s) 60, 192
HpyF3I CTNAG 6 cut(s) 396, 615, 699, 753, 933, 1010
HpySE526I ACGT 2 cut(s) 60, 192
Hsp92I GRCGYC 1 cut(s) 682
HspAI GCGC 1 cut(s) 164
KroI GCCGGC 2 cut(s) 72, 157
KroNI GCCGGC 2 cut(s) 74, 159
Ksp22I TGATCA 1 cut(s) 514
Kzo9I GATC 6 cut(s) 40, 228, 403, 514, 757, 866
LmnI GCTCC 2 cut(s) 94, 1174
LweI GCATC 5 cut(s) 584, 697, 869, 1075, 1138
MaeII ACGT 2 cut(s) 60, 192
MaeIII GTNAC 2 cut(s) 491, 896
MalI GATC 6 cut(s) 42, 230, 405, 516, 759, 868
MboI GATC 6 cut(s) 40, 228, 403, 514, 757, 866
MflI RGATCY 2 cut(s) 40, 866
MhlI GDGCHC 1 cut(s) 141
MluCI AATT 3 cut(s) 745, 1070, 1300
MlyI GAGTC 2 cut(s) 424, 691
Mph1103I ATGCAT 1 cut(s) 913
MroNI GCCGGC 2 cut(s) 72, 157
MroXI GAANNNNTTC 1 cut(s) 785
MseI TTAA 5 cut(s) 591, 963, 993, 1004, 1410
MslI CAYNNNNRTG 4 cut(s) 663, 1158, 1164, 1182
MspA1I CMGCKG 1 cut(s) 382
MspI CCGG 9 cut(s) 55, 73, 152, 158, 170, 266, 857, 1097, 1361
MspR9I CCNGG 7 cut(s) 55, 86, 153, 233, 857, 1326, 1347
MvaI CCWGG 4 cut(s) 86, 233, 1326, 1347
MvnI CGCG 1 cut(s) 1354
NaeI GCCGGC 2 cut(s) 74, 159
NciI CCSGG 3 cut(s) 55, 153, 857
NdeII GATC 6 cut(s) 40, 228, 403, 514, 757, 866
NgoMIV GCCGGC 2 cut(s) 72, 157
NlaIV GGNNCC 7 cut(s) 90, 139, 156, 213, 264, 270, 1287
NmuCI GTSAC 1 cut(s) 491
NsiI ATGCAT 1 cut(s) 913
NspI RCATGY 1 cut(s) 911
PaeI GCATGC 1 cut(s) 911
PagI TCATGA 2 cut(s) 658, 777
PdiI GCCGGC 2 cut(s) 74, 159
PdmI GAANNNNTTC 1 cut(s) 785
PfeI GAWTC 5 cut(s) 14, 29, 469, 926, 1130
PflFI GACNNNGTC 1 cut(s) 700
PfoI TCCNGGA 1 cut(s) 53
PleI GAGTC 2 cut(s) 424, 691
PpsI GAGTC 2 cut(s) 424, 691
PshAI GACNNNNGTC 1 cut(s) 1018
Psp6I CCWGG 4 cut(s) 84, 231, 1324, 1345
PspFI CCCAGC 3 cut(s) 382, 797, 1137
PspGI CCWGG 4 cut(s) 84, 231, 1324, 1345
PspN4I GGNNCC 7 cut(s) 90, 139, 156, 213, 264, 270, 1287
PspOMI GGGCCC 1 cut(s) 137
PspPI GGNCC 9 cut(s) 4, 137, 138, 155, 187, 211, 595, 1286, 1349
PstNI CAGNNNCTG 2 cut(s) 382, 1406
PsuI RGATCY 2 cut(s) 40, 866
PsyI GACNNNGTC 1 cut(s) 700
PvuII CAGCTG 1 cut(s) 382
RsaI GTAC 2 cut(s) 302, 820
RsaNI GTAC 2 cut(s) 301, 819
RseI CAYNNNNRTG 4 cut(s) 663, 1158, 1164, 1182
SaqAI TTAA 5 cut(s) 591, 963, 993, 1004, 1410
Sau3AI GATC 6 cut(s) 40, 228, 403, 514, 757, 866
Sau96I GGNCC 9 cut(s) 4, 137, 138, 155, 187, 211, 595, 1286, 1349
SchI GAGTC 2 cut(s) 424, 691
ScrFI CCNGG 7 cut(s) 55, 86, 153, 233, 857, 1326, 1347
SduI GDGCHC 1 cut(s) 141
SfaNI GCATC 5 cut(s) 584, 697, 869, 1075, 1138
SinI GGWCC 2 cut(s) 187, 211
SmiMI CAYNNNNRTG 4 cut(s) 663, 1158, 1164, 1182
SmlI CTYRAG 1 cut(s) 1032
SmoI CTYRAG 1 cut(s) 1032
SphI GCATGC 1 cut(s) 911
Sse9I AATT 3 cut(s) 745, 1070, 1300
SsiI CCGC 6 cut(s) 147, 203, 401, 634, 1039, 1352
SspI AATATT 1 cut(s) 1414
StyD4I CCNGG 7 cut(s) 53, 84, 151, 231, 855, 1324, 1345
StyI CCWWGG 1 cut(s) 7
TaaI ACNGT 3 cut(s) 24, 355, 628
TaiI ACGT 2 cut(s) 63, 195
TaqI TCGA 2 cut(s) 425, 1219
TaqII GACCGA 1 cut(s) 199
TasI AATT 3 cut(s) 745, 1070, 1300
TauI GCSGC 1 cut(s) 1354
TfiI GAWTC 5 cut(s) 14, 29, 469, 926, 1130
Tru1I TTAA 5 cut(s) 591, 963, 993, 1004, 1410
Tru9I TTAA 5 cut(s) 591, 963, 993, 1004, 1410
TscAI CASTG 2 cut(s) 121, 496
TseFI GTSAC 1 cut(s) 491
Tsp45I GTSAC 1 cut(s) 491
TspDTI ATGAA 8 cut(s) 462, 520, 647, 675, 794, 939, 1128, 1176
TspGWI ACGGA 2 cut(s) 806, 989
TspRI CASTG 2 cut(s) 121, 496
Tth111I GACNNNGTC 1 cut(s) 700
VpaK11BI GGWCC 2 cut(s) 187, 211
XagI CCTNNNNNAGG 1 cut(s) 779
XapI RAATTY 1 cut(s) 745
XceI RCATGY 1 cut(s) 911
XmiI GTMKAC 1 cut(s) 195
XmnI GAANNNNTTC 1 cut(s) 785
Zsp2I ATGCAT 1 cut(s) 913
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.