Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0009268

Physical Location & Seq

Genomic Coordinates Reverse (-)

13730052 .. 13732140

Gene Structure 2089 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1175700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1446 bp

ATGGTCAGGCTCTATCTCCTCTCTTCTTCCACTCACCTCCTTTCTTTCTGTAGAAAATACACTCTCCACACCCTGACCATACGAGCTCTTTCTTCCACCTCCACCGCCGCCACCATGTCCATAAGCCTCCAGTCCCACGCCTTCGCTGGCAATCCTCTGCTATCCAAGACCCCAAATCCCAGCGACCCGTTTTCACCATCCCAAGCCCTCGAGACCCTCAAGACCCAACTTTTGGAAGGGGCCCAATTGCCCTCTTCCCTCGGCTTCAAGGTTCTGCCCTTCAGAAAGGGCAGGCCTTTAGCCTCCTCCAGCGGTGGGGCCGGCGATTCGCGCGCCAATTGGCAAATTGGCATCTGGGTTGGATCAGTTTGTCTGAGTTCGCTGGTTTATCTGGGTTCTCGGCCCGAAGACGATGTCGTTTATTGGGCAATCGATGTTTCTGCTGAGAGTAAATTGGTTACTGAATTGGGTAGCAAGCAATTGTGTTTTGTTGAGCTGAGGACGCTTATGGTGGCTACTGATTGGGCTGATGCTCGAGCTATGGGGGAGTTGGCTATTGCTGGACATGCCAGGGCTTTGCTAGAATGGCATAGTATATCACAGTTTTGTGGACATTGTGGAGAAAAAACAGTCCCCAAGGAAGCTGGGAGGCGGAAGCAATGTTCTAGTGAGCAGTGCAGAAAGCGGGTCTACCCTCGTGTTGATCCGGTTGTCATAATGTTAGTCATTGATAGAGAGAATGACCGTGCTCTATTAAGTAGACAGTTTCGATTTGTACCTCGAATGTGGAGCTGCTTAGCTGGTTTTATAGAGCCAGGAGAAAGCTTAGAAGAAGCAGTGAGGAGAGAAACGTGGGAGGAGACCGGAATTGAAGTAGGAGAAGTTGTCTATCATAGCTCTCAGCCATGGCCTGTTGGACCAAGTAGCATGCCGTGCCAGTGCCAGTTGATGGTTGGGTTTTTTGCATATGCAAAGTCACTTGAAATAAATGTGGACAAGGAAGAGTTGGAAGGTACCCACAAAATTAGCTCATATTTACGATTTTATTGGACCTTTGACCATGTTTCCCCTTTGCTCTGTCCTGAAATTTATGTTTCCCGTGAAAAAACCTGCAAGAATATAGTACTTATGCGAGGCATTGCATCTGATAGTCATAAGAGCAACCTTTGGCACAGTAGAGAAGATGTAAAGAGAGCTTTGACATTTGCTGAGTACAAGAAGGCACAGAGAACGGCGGCATCAAGGGTAGAACAGATGTGCAAAGGAGTAGAGAAAGAGCAGAGCTTGTCTGCCGACTTCAATGTTGAAAGTGGCGAACTCGCCTCCATGTTTATACCCGGGCCATTTGCAATTGCCCATCACCTTATCTCTTCATGGGCCTATCAGGATGCAACCGATGGTGCTGCAGCTCTAAAACAATCTAGCGGTTCTACTTCGAATTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 ko04146 map00760 map01100 map04146

Pfam Domains

Protein Families

NUDIX NUDIX-like zf-NADH-PPase

Protein Analysis

482

Amino Acids

53.35

Weight (kDa)

7.56

Isoelectric Point (pI)

44.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_NUD	PF09297	200 - 231	9.8e-08	NADH pyrophosphatase zinc ribbon domain
NUDIX	PF00293	237 - 338	1.6e-15	NUDIX domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009268)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20070
fragaria_vesca	FvH4_1g03600 FvH4_1g03600 FvH4_1g03600
malus_domestica	MD00G1107300.v1.1 MD02G1035600.v1.1 MD15G1175700.v1.1
prunus_persica	Prupe.7G239600_v2.0.a1
pyrus_communis	pycom02g02940 pycom15g15770 pycom15g15780
rosa_chinensis	RchiOBHm_Chr2g0089131
rosa_laevigata	RLG00000015994
rosa_multiflora	Rmu_sc0016750.1_g000004 Rmu_sc0029975.1_g000004
rosa_roxburghii	Rroxscaffold_2G00152220
rosa_rugosa	Rorug01G0487600
rosa_samantha	Rh2AG043200 Rh2BG042000 Rh2CG043200 Rh2DG042200
rosa_wichuraiana	Rw2G003440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1118
Acc65I	GGTACC	1 cut(s)	1013
AccB1I	GGYRCC	1 cut(s)	1013
AccB7I	CCANNNNNTGG	2 cut(s)	232, 949
AccI	GTMKAC	2 cut(s)	690, 760
AccII	CGCG	2 cut(s)	331, 333
AciI	CCGC	7 cut(s)	105, 108, 312, 652, 685, 1235, 1425
AclWI	GGATC	2 cut(s)	370, 698
AcsI	RAATTY	2 cut(s)	1086, 1438
AcuI	CTGAAG	1 cut(s)	265
AfaI	GTAC	4 cut(s)	777, 1015, 1125, 1214
AfiI	CCNNNNNNNGG	3 cut(s)	232, 315, 949
AgsI	TTSAA	5 cut(s)	268, 872, 983, 1300, 1307
AjnI	CCWGG	2 cut(s)	569, 814
AloI	GAACNNNNNNTCC	2 cut(s)	646, 678
Alw21I	GWGCWC	2 cut(s)	88, 751
Alw26I	GTCTC	2 cut(s)	206, 854
AlwI	GGATC	2 cut(s)	370, 698
Ama87I	CYCGRG	3 cut(s)	209, 534, 1337
AoxI	GGCC	7 cut(s)	240, 293, 318, 401, 908, 1340, 1377
ApaI	GGGCCC	1 cut(s)	244
ApeKI	GCWGC	3 cut(s)	792, 1403, 1406
ApoI	RAATTY	2 cut(s)	1086, 1438
ArsI	GACNNNNNNTTYG	4 cut(s)	214, 246, 399, 431
Asp718I	GGTACC	1 cut(s)	1013
AspLEI	GCGC	2 cut(s)	333, 335
AspS9I	GGNCC	8 cut(s)	240, 241, 318, 402, 917, 1050, 1340, 1377
AsuC2I	CCSGG	2 cut(s)	1338, 1339
AsuHPI	GGTGA	3 cut(s)	26, 186, 1352
AsuII	TTCGAA	1 cut(s)	1436
AvaI	CYCGRG	3 cut(s)	209, 534, 1337
AvaII	GGWCC	2 cut(s)	917, 1050
BaeGI	GKGCMC	1 cut(s)	244
BanI	GGYRCC	1 cut(s)	1013
BanII	GRGCYC	2 cut(s)	88, 244
BauI	CACGAG	1 cut(s)	696
BbsI	GAAGAC	1 cut(s)	414
Bbv12I	GWGCWC	2 cut(s)	88, 751
BbvCI	CCTCAGC	1 cut(s)	497
BbvI	GCAGC	3 cut(s)	779, 1390, 1418
BccI	CCATC	4 cut(s)	205, 943, 1365, 1391
BceAI	ACGGC	2 cut(s)	916, 1248
BcgI	CGANNNNNNTGC	4 cut(s)	422, 456, 1385, 1419
BciT130I	CCWGG	2 cut(s)	571, 816
BcnI	CCSGG	2 cut(s)	1338, 1339
BcoDI	GTCTC	2 cut(s)	206, 854
BfaI	CTAG	3 cut(s)	581, 666, 1422
BfmI	CTRYAG	2 cut(s)	49, 1404
BfuAI	ACCTGC	1 cut(s)	1118
BisI	GCNGC	5 cut(s)	108, 793, 1236, 1404, 1407
BlpI	GCTNAGC	1 cut(s)	796
BlsI	GCNGC	5 cut(s)	109, 794, 1237, 1405, 1408
BmcAI	AGTACT	1 cut(s)	1125
Bme1390I	CCNGG	4 cut(s)	571, 816, 1338, 1339
Bme18I	GGWCC	2 cut(s)	917, 1050
BmeT110I	CYCGRG	3 cut(s)	209, 534, 1337
BmgT120I	GGNCC	8 cut(s)	240, 241, 318, 402, 917, 1050, 1340, 1377
BmiI	GGNNCC	4 cut(s)	241, 242, 319, 1015
BmrFI	CCNGG	4 cut(s)	571, 816, 1338, 1339
BmsI	GCATC	5 cut(s)	360, 520, 1151, 1247, 1378
BpiI	GAAGAC	1 cut(s)	414
BpmI	CTGGAG	2 cut(s)	113, 292
Bpu10I	CCTNAGC	1 cut(s)	497
Bpu1102I	GCTNAGC	1 cut(s)	796
Bpu14I	TTCGAA	1 cut(s)	1436
BpuEI	CTTGAG	1 cut(s)	203
BpuMI	CCSGG	2 cut(s)	1338, 1339
Bsa29I	ATCGAT	1 cut(s)	432
BsaI	GGTCTC	2 cut(s)	206, 854
BsaJI	CCNNGG	5 cut(s)	259, 570, 636, 905, 1337
BsaWI	WCCGGW	2 cut(s)	706, 863
BsaXI	ACNNNNNCTCC	2 cut(s)	870, 900
Bsc4I	CCNNNNNNNGG	3 cut(s)	232, 315, 949
Bse118I	RCCGGY	1 cut(s)	320
Bse1I	ACTGG	3 cut(s)	130, 937, 943
Bse3DI	GCAATG	2 cut(s)	665, 1137
BseBI	CCWGG	2 cut(s)	571, 816
BseCI	ATCGAT	1 cut(s)	432
BseDI	CCNNGG	5 cut(s)	259, 570, 636, 905, 1337
BseGI	GGATG	2 cut(s)	197, 1393
BseLI	CCNNNNNNNGG	3 cut(s)	232, 315, 949
BseMI	GCAATG	2 cut(s)	665, 1137
BseMII	CTCAG	5 cut(s)	365, 435, 488, 914, 1200
BseNI	ACTGG	3 cut(s)	130, 937, 943
BsePI	GCGCGC	1 cut(s)	331
BseRI	GAGGAG	4 cut(s)	8, 295, 856, 872
BseSI	GKGCMC	1 cut(s)	244
BseXI	GCAGC	3 cut(s)	779, 1390, 1418
BseYI	CCCAGC	2 cut(s)	179, 644
BsgI	GTGCAG	1 cut(s)	697
Bsh1236I	CGCG	2 cut(s)	331, 333
BshFI	GGCC	7 cut(s)	242, 295, 320, 403, 910, 1342, 1379
BshNI	GGYRCC	1 cut(s)	1013
BshVI	ATCGAT	1 cut(s)	432
BsiHKAI	GWGCWC	2 cut(s)	88, 751
BsiHKCI	CYCGRG	3 cut(s)	209, 534, 1337
BsiSI	CCGG	4 cut(s)	321, 707, 864, 1338
BslFI	GGGAC	2 cut(s)	118, 617
BslI	CCNNNNNNNGG	3 cut(s)	232, 315, 949
BsmAI	GTCTC	2 cut(s)	206, 854
BsmFI	GGGAC	2 cut(s)	118, 617
BsnI	GGCC	7 cut(s)	242, 295, 320, 403, 910, 1342, 1379
Bso31I	GGTCTC	2 cut(s)	206, 854
BsoBI	CYCGRG	3 cut(s)	209, 534, 1337
Bsp119I	TTCGAA	1 cut(s)	1436
Bsp120I	GGGCCC	1 cut(s)	240
Bsp1286I	GDGCHC	3 cut(s)	88, 244, 751
Bsp143I	GATC	2 cut(s)	362, 703
Bsp1720I	GCTNAGC	1 cut(s)	796
Bsp19I	CCATGG	1 cut(s)	905
BspACI	CCGC	7 cut(s)	105, 108, 312, 652, 685, 1235, 1425
BspANI	GGCC	7 cut(s)	242, 295, 320, 403, 910, 1342, 1379
BspCNI	CTCAG	5 cut(s)	366, 436, 489, 913, 1201
BspDI	ATCGAT	1 cut(s)	432
BspFNI	CGCG	2 cut(s)	331, 333
BspLI	GGNNCC	4 cut(s)	241, 242, 319, 1015
BspMAI	CTGCAG	1 cut(s)	1408
BspMI	ACCTGC	1 cut(s)	1118
BspPI	GGATC	2 cut(s)	370, 698
BspT104I	TTCGAA	1 cut(s)	1436
BspT107I	GGYRCC	1 cut(s)	1013
BspTNI	GGTCTC	2 cut(s)	206, 854
BsrDI	GCAATG	2 cut(s)	665, 1137
BsrFI	RCCGGY	1 cut(s)	320
BsrI	ACTGG	3 cut(s)	130, 937, 943
BssAI	RCCGGY	1 cut(s)	320
BssECI	CCNNGG	5 cut(s)	259, 570, 636, 905, 1337
BssHII	GCGCGC	1 cut(s)	331
BssMI	GATC	2 cut(s)	362, 703
BssSI	CACGAG	1 cut(s)	696
BssT1I	CCWWGG	2 cut(s)	636, 905
Bst2BI	CACGAG	1 cut(s)	696
Bst2UI	CCWGG	2 cut(s)	571, 816
Bst4CI	ACNGT	5 cut(s)	603, 631, 746, 765, 1175
Bst6I	CTCTTC	4 cut(s)	28, 259, 996, 1375
BstAPI	GCANNNNNTGC	1 cut(s)	933
BstBI	TTCGAA	1 cut(s)	1436
BstC8I	GCNNGC	6 cut(s)	148, 293, 322, 333, 476, 929
BstDEI	CTNAG	7 cut(s)	374, 444, 497, 796, 826, 900, 1209
BstDSI	CCRYGG	1 cut(s)	905
BstF5I	GGATG	2 cut(s)	197, 1393
BstFNI	CGCG	2 cut(s)	331, 333
BstHHI	GCGC	2 cut(s)	333, 335
BstKTI	GATC	2 cut(s)	365, 706
BstMAI	GTCTC	2 cut(s)	206, 854
BstMBI	GATC	2 cut(s)	362, 703
BstMWI	GCNNNNNNNGC	5 cut(s)	330, 502, 566, 586, 933
BstNI	CCWGG	2 cut(s)	571, 816
BstNSI	RCATGY	2 cut(s)	569, 931
BstSCI	CCNGG	4 cut(s)	569, 814, 1336, 1337
BstSFI	CTRYAG	2 cut(s)	49, 1404
BstSLI	GKGCMC	1 cut(s)	244
BstUI	CGCG	2 cut(s)	331, 333
BstV1I	GCAGC	3 cut(s)	779, 1390, 1418
BstV2I	GAAGAC	1 cut(s)	414
Bsu15I	ATCGAT	1 cut(s)	432
BsuRI	GGCC	7 cut(s)	242, 295, 320, 403, 910, 1342, 1379
BsuTUI	ATCGAT	1 cut(s)	432
BtgI	CCRYGG	1 cut(s)	905
BtsCI	GGATG	2 cut(s)	197, 1393
BtsI	GCAGTG	2 cut(s)	680, 843
BtsIMutI	CAGTG	3 cut(s)	680, 843, 944
BveI	ACCTGC	1 cut(s)	1118
Cac8I	GCNNGC	6 cut(s)	148, 293, 322, 333, 476, 929
CfoI	GCGC	2 cut(s)	333, 335
Cfr10I	RCCGGY	1 cut(s)	320
Cfr13I	GGNCC	8 cut(s)	240, 241, 318, 402, 917, 1050, 1340, 1377
Cfr9I	CCCGGG	1 cut(s)	1337
ClaI	ATCGAT	1 cut(s)	432
CseI	GACGC	1 cut(s)	511
Csp6I	GTAC	4 cut(s)	776, 1014, 1124, 1213
CviAII	CATG	7 cut(s)	115, 566, 906, 928, 1061, 1327, 1374
CviQI	GTAC	4 cut(s)	776, 1014, 1124, 1213
DdeI	CTNAG	7 cut(s)	374, 444, 497, 796, 826, 900, 1209
DpnI	GATC	2 cut(s)	364, 705
DpnII	GATC	2 cut(s)	362, 703
Eam1104I	CTCTTC	4 cut(s)	28, 259, 996, 1375
EarI	CTCTTC	4 cut(s)	28, 259, 996, 1375
EciI	GGCGGA	1 cut(s)	667
Ecl136II	GAGCTC	1 cut(s)	86
Eco130I	CCWWGG	2 cut(s)	636, 905
Eco147I	AGGCCT	1 cut(s)	295
Eco24I	GRGCYC	2 cut(s)	88, 244
Eco31I	GGTCTC	2 cut(s)	206, 854
Eco47I	GGWCC	2 cut(s)	917, 1050
Eco53kI	GAGCTC	1 cut(s)	86
Eco57I	CTGAAG	1 cut(s)	265
Eco88I	CYCGRG	3 cut(s)	209, 534, 1337
EcoICRI	GAGCTC	1 cut(s)	86
EcoO109I	RGGNCCY	1 cut(s)	240
EcoRII	CCWGG	2 cut(s)	569, 814
EcoT14I	CCWWGG	2 cut(s)	636, 905
EcoT38I	GRGCYC	2 cut(s)	88, 244
ErhI	CCWWGG	2 cut(s)	636, 905
FaeI	CATG	7 cut(s)	118, 569, 909, 931, 1064, 1330, 1377
FaqI	GGGAC	2 cut(s)	118, 617
FatI	CATG	7 cut(s)	114, 565, 905, 927, 1060, 1326, 1373
FauI	CCCGC	1 cut(s)	678
FauNDI	CATATG	1 cut(s)	967
FblI	GTMKAC	2 cut(s)	690, 760
Fnu4HI	GCNGC	5 cut(s)	108, 793, 1236, 1404, 1407
FokI	GGATG	2 cut(s)	184, 1400
FriOI	GRGCYC	2 cut(s)	88, 244
Fsp4HI	GCNGC	5 cut(s)	108, 793, 1236, 1404, 1407
FspBI	CTAG	3 cut(s)	581, 666, 1422
GlaI	GCGC	2 cut(s)	332, 334
GluI	GCNGC	5 cut(s)	108, 793, 1236, 1404, 1407
GsaI	CCCAGC	2 cut(s)	183, 648
GsuI	CTGGAG	2 cut(s)	113, 292
HaeIII	GGCC	7 cut(s)	242, 295, 320, 403, 910, 1342, 1379
HapII	CCGG	4 cut(s)	321, 707, 864, 1338
HgaI	GACGC	1 cut(s)	511
HhaI	GCGC	2 cut(s)	333, 335
Hin1II	CATG	7 cut(s)	118, 569, 909, 931, 1064, 1330, 1377
Hin6I	GCGC	2 cut(s)	331, 333
HinP1I	GCGC	2 cut(s)	331, 333
HindIII	AAGCTT	1 cut(s)	823
HinfI	GANTC	1 cut(s)	326
HpaII	CCGG	4 cut(s)	321, 707, 864, 1338
HphI	GGTGA	3 cut(s)	26, 186, 1352
Hpy166II	GTNNAC	4 cut(s)	611, 691, 761, 994
Hpy188I	TCNGA	3 cut(s)	284, 375, 1147
Hpy188III	TCNNGA	4 cut(s)	211, 220, 1082, 1385
Hpy8I	GTNNAC	4 cut(s)	611, 691, 761, 994
HpyAV	CCTTC	5 cut(s)	151, 230, 289, 1004, 1213
HpyCH4III	ACNGT	5 cut(s)	603, 631, 746, 765, 1175
HpyCH4IV	ACGT	1 cut(s)	851
HpyCH4V	TGCA	9 cut(s)	678, 965, 971, 1113, 1142, 1260, 1349, 1391, 1406
HpyF10VI	GCNNNNNNNGC	5 cut(s)	330, 502, 566, 586, 933
HpyF3I	CTNAG	7 cut(s)	374, 444, 497, 796, 826, 900, 1209
HpySE526I	ACGT	1 cut(s)	851
Hsp92II	CATG	7 cut(s)	118, 569, 909, 931, 1064, 1330, 1377
HspAI	GCGC	2 cut(s)	331, 333
KpnI	GGTACC	1 cut(s)	1017
KroI	GCCGGC	1 cut(s)	320
KroNI	GCCGGC	1 cut(s)	322
Kzo9I	GATC	2 cut(s)	362, 703
LmnI	GCTCC	1 cut(s)	789
Lsp1109I	GCAGC	3 cut(s)	779, 1390, 1418
LweI	GCATC	5 cut(s)	360, 520, 1151, 1247, 1378
MaeI	CTAG	3 cut(s)	581, 666, 1422
MaeII	ACGT	1 cut(s)	851
MaeIII	GTNAC	2 cut(s)	457, 975
MalI	GATC	2 cut(s)	364, 705
MboI	GATC	2 cut(s)	362, 703
MboII	GAAGA	9 cut(s)	15, 18, 84, 246, 419, 842, 1013, 1193, 1362
MfeI	CAATTG	4 cut(s)	245, 337, 479, 1350
MhlI	GDGCHC	3 cut(s)	88, 244, 751
MmeI	TCCRAC	3 cut(s)	340, 895, 987
MroNI	GCCGGC	1 cut(s)	320
MseI	TTAA	1 cut(s)	755
MspA1I	CMGCKG	1 cut(s)	312
MspI	CCGG	4 cut(s)	321, 707, 864, 1338
MspR9I	CCNGG	4 cut(s)	571, 816, 1338, 1339
MunI	CAATTG	4 cut(s)	245, 337, 479, 1350
MvaI	CCWGG	2 cut(s)	571, 816
MvnI	CGCG	2 cut(s)	331, 333
MwoI	GCNNNNNNNGC	5 cut(s)	330, 502, 566, 586, 933
NaeI	GCCGGC	1 cut(s)	322
NciI	CCSGG	2 cut(s)	1338, 1339
NcoI	CCATGG	1 cut(s)	905
NdeI	CATATG	1 cut(s)	967
NdeII	GATC	2 cut(s)	362, 703
NgoMIV	GCCGGC	1 cut(s)	320
NlaIII	CATG	7 cut(s)	118, 569, 909, 931, 1064, 1330, 1377
NlaIV	GGNNCC	4 cut(s)	241, 242, 319, 1015
NmeAIII	GCCGAG	2 cut(s)	240, 379
NmuCI	GTSAC	1 cut(s)	975
NspI	RCATGY	2 cut(s)	569, 931
NspV	TTCGAA	1 cut(s)	1436
PaeI	GCATGC	1 cut(s)	931
PaeR7I	CTCGAG	2 cut(s)	209, 534
PauI	GCGCGC	1 cut(s)	331
PceI	AGGCCT	1 cut(s)	295
PdiI	GCCGGC	1 cut(s)	322
PfeI	GAWTC	1 cut(s)	326
PflFI	GACNNNGTC	1 cut(s)	413
PflMI	CCANNNNNTGG	2 cut(s)	232, 949
PkrI	GCNGC	5 cut(s)	109, 794, 1237, 1405, 1408
Psp124BI	GAGCTC	1 cut(s)	88
Psp6I	CCWGG	2 cut(s)	569, 814
PspFI	CCCAGC	2 cut(s)	179, 644
PspGI	CCWGG	2 cut(s)	569, 814
PspN4I	GGNNCC	4 cut(s)	241, 242, 319, 1015
PspOMI	GGGCCC	1 cut(s)	240
PspPI	GGNCC	8 cut(s)	240, 241, 318, 402, 917, 1050, 1340, 1377
PspXI	VCTCGAGB	1 cut(s)	534
PstI	CTGCAG	1 cut(s)	1408
PsyI	GACNNNGTC	1 cut(s)	413
PteI	GCGCGC	1 cut(s)	331
RsaI	GTAC	4 cut(s)	777, 1015, 1125, 1214
RsaNI	GTAC	4 cut(s)	776, 1014, 1124, 1213
SacI	GAGCTC	1 cut(s)	88
SaqAI	TTAA	1 cut(s)	755
SatI	GCNGC	5 cut(s)	108, 793, 1236, 1404, 1407
Sau3AI	GATC	2 cut(s)	362, 703
Sau96I	GGNCC	8 cut(s)	240, 241, 318, 402, 917, 1050, 1340, 1377
ScaI	AGTACT	1 cut(s)	1125
ScrFI	CCNGG	4 cut(s)	571, 816, 1338, 1339
SduI	GDGCHC	3 cut(s)	88, 244, 751
SfaNI	GCATC	5 cut(s)	360, 520, 1151, 1247, 1378
SfcI	CTRYAG	2 cut(s)	49, 1404
Sfr274I	CTCGAG	2 cut(s)	209, 534
SfuI	TTCGAA	1 cut(s)	1436
SinI	GGWCC	2 cut(s)	917, 1050
SlaI	CTCGAG	2 cut(s)	209, 534
SmaI	CCCGGG	1 cut(s)	1339
SmlI	CTYRAG	3 cut(s)	209, 218, 534
SmoI	CTYRAG	3 cut(s)	209, 218, 534
SphI	GCATGC	1 cut(s)	931
SseBI	AGGCCT	1 cut(s)	295
SsiI	CCGC	7 cut(s)	105, 108, 312, 652, 685, 1235, 1425
SspMI	CTAG	3 cut(s)	581, 666, 1422
SstI	GAGCTC	1 cut(s)	88
StuI	AGGCCT	1 cut(s)	295
StyD4I	CCNGG	4 cut(s)	569, 814, 1336, 1337
StyI	CCWWGG	2 cut(s)	636, 905
TaaI	ACNGT	5 cut(s)	603, 631, 746, 765, 1175
TaiI	ACGT	1 cut(s)	854
TaqI	TCGA	6 cut(s)	210, 432, 535, 769, 781, 1436
TatI	WGTACW	2 cut(s)	1123, 1212
TauI	GCSGC	2 cut(s)	110, 1238
TfiI	GAWTC	1 cut(s)	326
Tru1I	TTAA	1 cut(s)	755
Tru9I	TTAA	1 cut(s)	755
TscAI	CASTG	3 cut(s)	680, 843, 944
TseFI	GTSAC	1 cut(s)	975
TseI	GCWGC	3 cut(s)	792, 1403, 1406
Tsp45I	GTSAC	1 cut(s)	975
TspDTI	ATGAA	1 cut(s)	1362
TspMI	CCCGGG	1 cut(s)	1337
TspRI	CASTG	3 cut(s)	680, 843, 944
Tth111I	GACNNNGTC	1 cut(s)	413
Van91I	CCANNNNNTGG	2 cut(s)	232, 949
VpaK11BI	GGWCC	2 cut(s)	917, 1050
XapI	RAATTY	2 cut(s)	1086, 1438
XceI	RCATGY	2 cut(s)	569, 931
XcmI	CCANNNNNNNNNTGG	2 cut(s)	143, 950
XhoI	CTCGAG	2 cut(s)	209, 534
XmaI	CCCGGG	1 cut(s)	1337
XmiI	GTMKAC	2 cut(s)	690, 760
XspI	CTAG	3 cut(s)	581, 666, 1422
ZrmI	AGTACT	1 cut(s)	1125

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.