Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009268

Physical Location & Seq

Genomic Coordinates Reverse (-)

3422510 .. 3425196

Gene Structure 2687 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ46443

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1323 bp

ATGGTCAAGCTCTCTCTTCTCTACTCTTCCTCTCTTCATCTCCTAGCTTTATCCAAAAAGCTTGCTCTGCCCAATTTCACAAGAACCCTTTGCTCAATTCCCACCACCATGTCCATAAACCTCCAGTCCCATGCCTTTGCTGGCAATCCTATGAGATCCAAGACCCCAAAACCCAGTGACCCATTTTCACCAACCCAAGCCCTCGAGACCCTCAAGACTCGACTTTTGGACAATCCCCACCTGCCCTCTTCTTCACCAAGCTTCAAGGTCCTGCCTTTCAGAAAGGGCAGGCCTTTGGCCTCAACCATCGGTGGGATCAGTGATTTGAAGCCAACTTGGTATCTGGGTTGGATCAGTTTGGCTGATTGTAAAGGCTTGTTGGGCAATTGTGGGGTTGAGTTGAGTGGTGACTCATTGGTGTATCTGGGTTCAAGGCCTGAGGAGGATGCGGTTTATTGGGCAATTGATGTGTCTAAGGAGGATGGTGTGGTTCCTGAATTGGGTGGGAAGCAATTGTGTTTTGTTGAGCTCAGAACACTTATGGTGGCTACTGATTGGGCTGATGAAAGGGCTATGGCAGAGTTGGCTGTTGCTGGCCATGCCAGGGCTTTGCTTGAGTGGCACAGTACATCACTGTTTTGTGGACATTGTGGAGAAAAGACAGTCCCCAAGGAAGCTGGGAGACGCAAGCAGTGTTCTAGTGAGCTTTGCAAAAAGCGGGTCTACCCTCGTGTTGATCCGGTTGTCATAATGTTAGTGATTGATAAAGAGAATGACCGTGCTCTGTTGAGTAGACAATCCCGATTTGTACCTAGAATGTGGAGTTGCTTAGCTGGTTTTATAGAGCCAGGAGAAAGCTTAGAAGAAGCGGTGAAGAGAGAAACATGGGAGGAGACCGGTATTGAAGTAGGAGAAGTTGTCTATCATAGCTCTCAACCATGGCCTGTTGGACCAAGTAGCATGCCATGCCAGTTGATGGTTGGTTTCTTTGCATATGCCAAATCACTTGAAATAAATGTCGACAAGGAAGAGTTGGAAGACGCCCAGTGGCACAGTAGAGAAGATGTAAAAAAAGCTTTGACATTTGCTGAATATGAGAAGGCACAGAAAACAGCGGCAGAGAAGGTTGAGCAGATGTGCAGGGGCGTTGAGAAAGGGCAGAACTTTTCTGCAGACTACAATGTGGAAAGTGGCGAACTTACTCCCATGTTTATACCCGGGCCATTTGCAATTGCCCATCACCTCATCTCTTCTTGGGTCTATCAGGATGCACCAGACAGTGTTGATGCACGTCCAAAACATCCTTGTGGTTCAAATTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 ko04146 map00760 map01100 map04146

Pfam Domains

Protein Families

NUDIX NUDIX-like zf-NADH-PPase

Protein Analysis

440

Amino Acids

48.76

Weight (kDa)

6.05

Isoelectric Point (pI)

39.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NUDIX-like	PF09296	90 - 207	9.6e-07	NADH pyrophosphatase-like rudimentary NUDIX domain
Zn_ribbon_NUD	PF09297	209 - 234	2.9e-07	NADH pyrophosphatase zinc ribbon domain
NUDIX	PF00293	248 - 359	3.1e-19	NUDIX domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009268)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20070
fragaria_vesca	FvH4_1g03600 FvH4_1g03600 FvH4_1g03600
malus_domestica	MD00G1107300.v1.1 MD02G1035600.v1.1 MD15G1175700.v1.1
prunus_persica	Prupe.7G239600_v2.0.a1
pyrus_communis	pycom02g02940 pycom15g15770 pycom15g15780
rosa_chinensis	RchiOBHm_Chr2g0089131
rosa_laevigata	RLG00000015994
rosa_multiflora	Rmu_sc0016750.1_g000004 Rmu_sc0029975.1_g000004
rosa_roxburghii	Rroxscaffold_2G00152220
rosa_rugosa	Rorug01G0487600
rosa_samantha	Rh2AG043200 Rh2BG042000 Rh2CG043200 Rh2DG042200
rosa_wichuraiana	Rw2G003440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	249
Acc36I	ACCTGC	1 cut(s)	249
AccB7I	CCANNNNNTGG	1 cut(s)	976
AccI	GTMKAC	3 cut(s)	723, 793, 1020
AciI	CCGC	4 cut(s)	449, 718, 869, 1115
AclWI	GGATC	4 cut(s)	150, 323, 359, 731
AcoI	YGGCCR	1 cut(s)	595
AcsI	RAATTY	1 cut(s)	1315
AcyI	GRCGYC	1 cut(s)	1041
AfaI	GTAC	2 cut(s)	628, 810
AfiI	CCNNNNNNNGG	4 cut(s)	312, 500, 604, 976
AgeI	ACCGGT	1 cut(s)	896
AgsI	TTSAA	6 cut(s)	265, 328, 432, 905, 1010, 1314
AjiI	CACGTC	1 cut(s)	1292
AjnI	CCWGG	2 cut(s)	602, 847
Alw21I	GWGCWC	2 cut(s)	531, 784
Alw26I	GTCTC	3 cut(s)	200, 676, 887
AlwI	GGATC	4 cut(s)	150, 323, 359, 731
Ama87I	CYCGRG	2 cut(s)	203, 1217
AoxI	GGCC	6 cut(s)	290, 297, 434, 595, 941, 1220
ApoI	RAATTY	1 cut(s)	1315
ArsI	GACNNNNNNTTYG	4 cut(s)	208, 240, 705, 737
AsiGI	ACCGGT	1 cut(s)	896
AspS9I	GGNCC	3 cut(s)	268, 950, 1220
AsuC2I	CCSGG	2 cut(s)	1218, 1219
AsuHPI	GGTGA	5 cut(s)	180, 246, 419, 883, 1232
AvaI	CYCGRG	2 cut(s)	203, 1217
AvaII	GGWCC	2 cut(s)	268, 950
AxyI	CCTNAGG	1 cut(s)	438
BalI	TGGCCA	1 cut(s)	597
BanII	GRGCYC	1 cut(s)	531
BauI	CACGAG	1 cut(s)	729
BbsI	GAAGAC	1 cut(s)	1044
Bbv12I	GWGCWC	2 cut(s)	531, 784
BccI	CCATC	4 cut(s)	314, 476, 970, 1245
BciT130I	CCWGG	2 cut(s)	604, 849
BcnI	CCSGG	2 cut(s)	1218, 1219
BcoDI	GTCTC	3 cut(s)	200, 676, 887
BfaI	CTAG	3 cut(s)	44, 699, 813
BfmI	CTRYAG	1 cut(s)	1170
BfuAI	ACCTGC	1 cut(s)	249
BisI	GCNGC	1 cut(s)	1116
BlpI	GCTNAGC	1 cut(s)	829
BlsI	GCNGC	1 cut(s)	1117
Bme1390I	CCNGG	4 cut(s)	604, 849, 1218, 1219
Bme18I	GGWCC	2 cut(s)	268, 950
BmeT110I	CYCGRG	2 cut(s)	203, 1217
BmgBI	CACGTC	1 cut(s)	1292
BmgT120I	GGNCC	3 cut(s)	268, 950, 1220
BmiI	GGNNCC	1 cut(s)	492
BmrFI	CCNGG	4 cut(s)	604, 849, 1218, 1219
BmrI	ACTGGG	2 cut(s)	168, 1039
BmsI	GCATC	3 cut(s)	436, 1258, 1276
BmuI	ACTGGG	2 cut(s)	168, 1039
BpiI	GAAGAC	1 cut(s)	1044
BpmI	CTGGAG	1 cut(s)	107
Bpu1102I	GCTNAGC	1 cut(s)	829
BpuEI	CTTGAG	2 cut(s)	197, 635
BpuMI	CCSGG	2 cut(s)	1218, 1219
BsaHI	GRCGYC	1 cut(s)	1041
BsaI	GGTCTC	2 cut(s)	200, 887
BsaJI	CCNNGG	4 cut(s)	603, 669, 938, 1217
BsaWI	WCCGGW	2 cut(s)	739, 896
BsaXI	ACNNNNNCTCC	2 cut(s)	903, 933
Bsc4I	CCNNNNNNNGG	4 cut(s)	312, 500, 604, 976
Bse118I	RCCGGY	1 cut(s)	896
Bse1I	ACTGG	4 cut(s)	124, 174, 970, 1045
Bse21I	CCTNAGG	1 cut(s)	438
BseBI	CCWGG	2 cut(s)	604, 849
BseDI	CCNNGG	4 cut(s)	603, 669, 938, 1217
BseGI	GGATG	4 cut(s)	451, 487, 1273, 1300
BseLI	CCNNNNNNNGG	4 cut(s)	312, 500, 604, 976
BseMII	CTCAG	2 cut(s)	429, 544
BseNI	ACTGG	4 cut(s)	124, 174, 970, 1045
BseRI	GAGGAG	2 cut(s)	455, 905
BseYI	CCCAGC	1 cut(s)	677
BsgI	GTGCAG	1 cut(s)	1159
BshFI	GGCC	6 cut(s)	292, 299, 436, 597, 943, 1222
BshTI	ACCGGT	1 cut(s)	896
BsiHKAI	GWGCWC	2 cut(s)	531, 784
BsiHKCI	CYCGRG	2 cut(s)	203, 1217
BsiSI	CCGG	3 cut(s)	740, 897, 1218
BslFI	GGGAC	2 cut(s)	112, 650
BslI	CCNNNNNNNGG	4 cut(s)	312, 500, 604, 976
BsmAI	GTCTC	3 cut(s)	200, 676, 887
BsmBI	CGTCTC	1 cut(s)	676
BsmFI	GGGAC	2 cut(s)	112, 650
BsnI	GGCC	6 cut(s)	292, 299, 436, 597, 943, 1222
Bso31I	GGTCTC	2 cut(s)	200, 887
BsoBI	CYCGRG	2 cut(s)	203, 1217
Bsp1286I	GDGCHC	2 cut(s)	531, 784
Bsp143I	GATC	4 cut(s)	155, 315, 351, 736
Bsp1720I	GCTNAGC	1 cut(s)	829
Bsp19I	CCATGG	1 cut(s)	938
BspACI	CCGC	4 cut(s)	449, 718, 869, 1115
BspANI	GGCC	6 cut(s)	292, 299, 436, 597, 943, 1222
BspCNI	CTCAG	2 cut(s)	430, 543
BspLI	GGNNCC	1 cut(s)	492
BspMAI	CTGCAG	1 cut(s)	1174
BspMI	ACCTGC	1 cut(s)	249
BspPI	GGATC	4 cut(s)	150, 323, 359, 731
BspTNI	GGTCTC	2 cut(s)	200, 887
BsrFI	RCCGGY	1 cut(s)	896
BsrI	ACTGG	4 cut(s)	124, 174, 970, 1045
BssAI	RCCGGY	1 cut(s)	896
BssECI	CCNNGG	4 cut(s)	603, 669, 938, 1217
BssMI	GATC	4 cut(s)	155, 315, 351, 736
BssNI	GRCGYC	1 cut(s)	1041
BssSI	CACGAG	1 cut(s)	729
BssT1I	CCWWGG	2 cut(s)	669, 938
Bst2BI	CACGAG	1 cut(s)	729
Bst2UI	CCWGG	2 cut(s)	604, 849
Bst4CI	ACNGT	6 cut(s)	626, 636, 664, 779, 1055, 1280
Bst6I	CTCTTC	7 cut(s)	21, 31, 39, 253, 869, 1023, 1255
BstACI	GRCGYC	1 cut(s)	1041
BstAPI	GCANNNNNTGC	1 cut(s)	966
BstC8I	GCNNGC	6 cut(s)	63, 142, 290, 595, 689, 962
BstDEI	CTNAG	5 cut(s)	438, 474, 530, 829, 859
BstDSI	CCRYGG	1 cut(s)	938
BstF5I	GGATG	4 cut(s)	451, 487, 1273, 1300
BstKTI	GATC	4 cut(s)	158, 318, 354, 739
BstMAI	GTCTC	3 cut(s)	200, 676, 887
BstMBI	GATC	4 cut(s)	155, 315, 351, 736
BstMWI	GCNNNNNNNGC	6 cut(s)	67, 381, 584, 599, 619, 966
BstNI	CCWGG	2 cut(s)	604, 849
BstNSI	RCATGY	1 cut(s)	964
BstSCI	CCNGG	4 cut(s)	602, 847, 1216, 1217
BstSFI	CTRYAG	1 cut(s)	1170
BstV2I	GAAGAC	1 cut(s)	1044
BstX2I	RGATCY	1 cut(s)	155
BstYI	RGATCY	1 cut(s)	155
Bsu36I	CCTNAGG	1 cut(s)	438
BsuRI	GGCC	6 cut(s)	292, 299, 436, 597, 943, 1222
BtgI	CCRYGG	1 cut(s)	938
BtrI	CACGTC	1 cut(s)	1292
BtsCI	GGATG	4 cut(s)	451, 487, 1273, 1300
BtsI	GCAGTG	1 cut(s)	698
BtsIMutI	CAGTG	6 cut(s)	181, 325, 632, 698, 1052, 1285
BveI	ACCTGC	1 cut(s)	249
Cac8I	GCNNGC	6 cut(s)	63, 142, 290, 595, 689, 962
Cfr10I	RCCGGY	1 cut(s)	896
Cfr13I	GGNCC	3 cut(s)	268, 950, 1220
Cfr9I	CCCGGG	1 cut(s)	1217
CseI	GACGC	2 cut(s)	693, 1049
Csp6I	GTAC	2 cut(s)	627, 809
CspAI	ACCGGT	1 cut(s)	896
CviAII	CATG	8 cut(s)	109, 131, 599, 885, 939, 961, 966, 1207
CviQI	GTAC	2 cut(s)	627, 809
DdeI	CTNAG	5 cut(s)	438, 474, 530, 829, 859
DpnI	GATC	4 cut(s)	157, 317, 353, 738
DpnII	GATC	4 cut(s)	155, 315, 351, 736
EaeI	YGGCCR	1 cut(s)	595
Eam1104I	CTCTTC	7 cut(s)	21, 31, 39, 253, 869, 1023, 1255
EarI	CTCTTC	7 cut(s)	21, 31, 39, 253, 869, 1023, 1255
Ecl136II	GAGCTC	1 cut(s)	529
Eco130I	CCWWGG	2 cut(s)	669, 938
Eco147I	AGGCCT	2 cut(s)	292, 436
Eco24I	GRGCYC	1 cut(s)	531
Eco31I	GGTCTC	2 cut(s)	200, 887
Eco47I	GGWCC	2 cut(s)	268, 950
Eco53kI	GAGCTC	1 cut(s)	529
Eco81I	CCTNAGG	1 cut(s)	438
Eco88I	CYCGRG	2 cut(s)	203, 1217
EcoICRI	GAGCTC	1 cut(s)	529
EcoO109I	RGGNCCY	1 cut(s)	268
EcoRII	CCWGG	2 cut(s)	602, 847
EcoT14I	CCWWGG	2 cut(s)	669, 938
EcoT38I	GRGCYC	1 cut(s)	531
ErhI	CCWWGG	2 cut(s)	669, 938
Esp3I	CGTCTC	1 cut(s)	676
FaeI	CATG	8 cut(s)	112, 134, 602, 888, 942, 964, 969, 1210
FaqI	GGGAC	2 cut(s)	112, 650
FatI	CATG	8 cut(s)	108, 130, 598, 884, 938, 960, 965, 1206
FauI	CCCGC	1 cut(s)	711
FauNDI	CATATG	1 cut(s)	994
FblI	GTMKAC	3 cut(s)	723, 793, 1020
Fnu4HI	GCNGC	1 cut(s)	1116
FokI	GGATG	4 cut(s)	458, 494, 1280, 1287
FriOI	GRGCYC	1 cut(s)	531
Fsp4HI	GCNGC	1 cut(s)	1116
FspBI	CTAG	3 cut(s)	44, 699, 813
GluI	GCNGC	1 cut(s)	1116
GsaI	CCCAGC	1 cut(s)	681
GsuI	CTGGAG	1 cut(s)	107
HaeIII	GGCC	6 cut(s)	292, 299, 436, 597, 943, 1222
HapII	CCGG	3 cut(s)	740, 897, 1218
HgaI	GACGC	2 cut(s)	693, 1049
Hin1I	GRCGYC	1 cut(s)	1041
Hin1II	CATG	8 cut(s)	112, 134, 602, 888, 942, 964, 969, 1210
HincII	GTYRAC	1 cut(s)	1021
HindII	GTYRAC	1 cut(s)	1021
HindIII	AAGCTT	4 cut(s)	59, 259, 856, 1074
HinfI	GANTC	2 cut(s)	217, 410
HpaII	CCGG	3 cut(s)	740, 897, 1218
HphI	GGTGA	5 cut(s)	180, 246, 419, 883, 1232
Hpy166II	GTNNAC	4 cut(s)	644, 724, 794, 1021
Hpy188I	TCNGA	2 cut(s)	281, 533
Hpy188III	TCNNGA	5 cut(s)	205, 214, 494, 801, 1265
Hpy8I	GTNNAC	4 cut(s)	644, 724, 794, 1021
HpyAV	CCTTC	2 cut(s)	1093, 1117
HpyCH4III	ACNGT	6 cut(s)	626, 636, 664, 779, 1055, 1280
HpyCH4IV	ACGT	1 cut(s)	1291
HpyCH4V	TGCA	7 cut(s)	711, 992, 1140, 1172, 1229, 1271, 1289
HpyF10VI	GCNNNNNNNGC	6 cut(s)	67, 381, 584, 599, 619, 966
HpyF3I	CTNAG	5 cut(s)	438, 474, 530, 829, 859
HpySE526I	ACGT	1 cut(s)	1291
Hsp92I	GRCGYC	1 cut(s)	1041
Hsp92II	CATG	8 cut(s)	112, 134, 602, 888, 942, 964, 969, 1210
Kzo9I	GATC	4 cut(s)	155, 315, 351, 736
LweI	GCATC	3 cut(s)	436, 1258, 1276
MaeI	CTAG	3 cut(s)	44, 699, 813
MaeII	ACGT	1 cut(s)	1291
MaeIII	GTNAC	2 cut(s)	176, 407
MalI	GATC	4 cut(s)	157, 317, 353, 738
MboI	GATC	4 cut(s)	155, 315, 351, 736
MfeI	CAATTG	4 cut(s)	385, 462, 512, 1230
MflI	RGATCY	1 cut(s)	155
MhlI	GDGCHC	2 cut(s)	531, 784
MlsI	TGGCCA	1 cut(s)	597
MluCI	AATT	8 cut(s)	73, 96, 385, 462, 497, 512, 1230, 1315
MluNI	TGGCCA	1 cut(s)	597
MlyI	GAGTC	2 cut(s)	211, 404
MmeI	TCCRAC	3 cut(s)	329, 928, 1014
Mox20I	TGGCCA	1 cut(s)	597
MscI	TGGCCA	1 cut(s)	597
MslI	CAYNNNNRTG	2 cut(s)	107, 1305
Msp20I	TGGCCA	1 cut(s)	597
MspA1I	CMGCKG	1 cut(s)	1115
MspI	CCGG	3 cut(s)	740, 897, 1218
MspR9I	CCNGG	4 cut(s)	604, 849, 1218, 1219
MunI	CAATTG	4 cut(s)	385, 462, 512, 1230
MvaI	CCWGG	2 cut(s)	604, 849
MwoI	GCNNNNNNNGC	6 cut(s)	67, 381, 584, 599, 619, 966
NciI	CCSGG	2 cut(s)	1218, 1219
NcoI	CCATGG	1 cut(s)	938
NdeI	CATATG	1 cut(s)	994
NdeII	GATC	4 cut(s)	155, 315, 351, 736
NlaIII	CATG	8 cut(s)	112, 134, 602, 888, 942, 964, 969, 1210
NlaIV	GGNNCC	1 cut(s)	492
NmuCI	GTSAC	2 cut(s)	176, 407
NspI	RCATGY	1 cut(s)	964
PaeI	GCATGC	1 cut(s)	964
PaeR7I	CTCGAG	1 cut(s)	203
PaqCI	CACCTGC	1 cut(s)	249
PceI	AGGCCT	2 cut(s)	292, 436
PflMI	CCANNNNNTGG	1 cut(s)	976
PinAI	ACCGGT	1 cut(s)	896
PkrI	GCNGC	1 cut(s)	1117
PleI	GAGTC	2 cut(s)	211, 404
PpsI	GAGTC	2 cut(s)	211, 404
PpuMI	RGGWCCY	1 cut(s)	268
Psp124BI	GAGCTC	1 cut(s)	531
Psp5II	RGGWCCY	1 cut(s)	268
Psp6I	CCWGG	2 cut(s)	602, 847
PspFI	CCCAGC	1 cut(s)	677
PspGI	CCWGG	2 cut(s)	602, 847
PspN4I	GGNNCC	1 cut(s)	492
PspPI	GGNCC	3 cut(s)	268, 950, 1220
PspPPI	RGGWCCY	1 cut(s)	268
PstI	CTGCAG	1 cut(s)	1174
PsuI	RGATCY	1 cut(s)	155
RsaI	GTAC	2 cut(s)	628, 810
RsaNI	GTAC	2 cut(s)	627, 809
RseI	CAYNNNNRTG	2 cut(s)	107, 1305
SacI	GAGCTC	1 cut(s)	531
SalI	GTCGAC	1 cut(s)	1019
SatI	GCNGC	1 cut(s)	1116
Sau3AI	GATC	4 cut(s)	155, 315, 351, 736
Sau96I	GGNCC	3 cut(s)	268, 950, 1220
SchI	GAGTC	2 cut(s)	211, 404
ScrFI	CCNGG	4 cut(s)	604, 849, 1218, 1219
SduI	GDGCHC	2 cut(s)	531, 784
SfaNI	GCATC	3 cut(s)	436, 1258, 1276
SfcI	CTRYAG	1 cut(s)	1170
Sfr274I	CTCGAG	1 cut(s)	203
SinI	GGWCC	2 cut(s)	268, 950
SlaI	CTCGAG	1 cut(s)	203
SmaI	CCCGGG	1 cut(s)	1219
SmiMI	CAYNNNNRTG	2 cut(s)	107, 1305
SmlI	CTYRAG	3 cut(s)	203, 212, 614
SmoI	CTYRAG	3 cut(s)	203, 212, 614
SphI	GCATGC	1 cut(s)	964
Sse9I	AATT	8 cut(s)	73, 96, 385, 462, 497, 512, 1230, 1315
SseBI	AGGCCT	2 cut(s)	292, 436
SsiI	CCGC	4 cut(s)	449, 718, 869, 1115
SspMI	CTAG	3 cut(s)	44, 699, 813
SstI	GAGCTC	1 cut(s)	531
StuI	AGGCCT	2 cut(s)	292, 436
StyD4I	CCNGG	4 cut(s)	602, 847, 1216, 1217
StyI	CCWWGG	2 cut(s)	669, 938
TaaI	ACNGT	6 cut(s)	626, 636, 664, 779, 1055, 1280
TaiI	ACGT	1 cut(s)	1294
TaqI	TCGA	3 cut(s)	204, 220, 1020
TasI	AATT	8 cut(s)	73, 96, 385, 462, 497, 512, 1230, 1315
TatI	WGTACW	1 cut(s)	626
TauI	GCSGC	1 cut(s)	1118
TscAI	CASTG	6 cut(s)	181, 325, 639, 698, 1052, 1285
TseFI	GTSAC	2 cut(s)	176, 407
Tsp45I	GTSAC	2 cut(s)	176, 407
TspDTI	ATGAA	2 cut(s)	26, 579
TspMI	CCCGGG	1 cut(s)	1217
TspRI	CASTG	6 cut(s)	181, 325, 639, 698, 1052, 1285
Van91I	CCANNNNNTGG	1 cut(s)	976
VpaK11BI	GGWCC	2 cut(s)	268, 950
XapI	RAATTY	1 cut(s)	1315
XceI	RCATGY	1 cut(s)	964
XcmI	CCANNNNNNNNNTGG	2 cut(s)	137, 977
XhoI	CTCGAG	1 cut(s)	203
XmaI	CCCGGG	1 cut(s)	1217
XmiI	GTMKAC	3 cut(s)	723, 793, 1020
XspI	CTAG	3 cut(s)	44, 699, 813

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.