Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0005325

Physical Location & Seq

Genomic Coordinates Forward (+)

18169052 .. 18174625

Gene Structure 5574 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1223600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2826 bp

ATGCCGGGGACACCAGCAACACCGTCGTCTAAGGTGCGAAGGACTCCGTGCTCCACTCCGGGCGGTTCTAAAGTCAGTGAGGAGAAAATTTTAGTTACAGTTCGTTTGAGGCCACTAAACCGCAGAGAGCAGGCGTTGTATGATCTTATAGCTTGGGACTGCTTGGATGAGCACACTATAGTATTCAAGAATCCGAATCATGAGCGGCCCTCAAACCCCTACACCTTTGATAAGGTTTTTGGCCCGATGTGCTCAACTCAGAAGGTTTATGAAGAAGGAGCCAAGGATGTTGCTTTATCTGCACTTACAGGAATGAACGCAACAATTTTTGCGTATGGACAAACTAGTAGTGGTAAGACATTTACCATGAGAGGAATCACTGAAAATGCAGTGAGGGACATCTTTGAACACATCAAGAATATGCCAGAAAGGGAGTTTGTTTTGAAATTTTCTGCTTTGGAGATCTATAATGAAACCGTTGTTGACCTCCTGAAACGCAAATCAGGCTCGCTTCGGCTTTTGGATGACTCCGAGAAAGGGACCATCGTGGACAAGCCACAGGAAGAAATTGTTCAGAATGGCGAACATTTGAGGCACTTAATTGGAATTTGTGAAGCTCAGAGGCAAGTGGGAGAAACTTCTCTAAATGATAAAAGCTCAAGATCGCATCAGATAATCAGGCTGACCATAGAGAGCAGCCTCCGGGATAGTTCAGGGTCCATGAAAGCTTTTGGAGCCAGTTTGAACCTTGTGGACCTTGCTGGAAGTGAACGCGCCTCCCAAACAAATGCAGATGGTACAAGGTTGAAGGAAGGTAGTCACATTAACCGTAGCTTGTTGACACTCACAACCGTTATCAGGAAGCTTAGCGGTGGAAAAAAAAGTGGTCACATACCATACAGGGATTCAAAACTTACACGATTACTGCAGTCTTCACTTGGGGGAAATGCTCGGACAGCTATTATATGTACCATAAGCCCAGCGTTAAGTCATGTAGAGCAAACAAGGAACACACTCTCATTCGCAACTAGTGCCAAGGAAGTCACAAATAGTGCGAAAATAAACATGAAGGAAGTAGCCAGACTTGAAGCAGAGTTACGAAGTCCAAAGCCTTCTTATTTGAGGTCTATACTAGAAGAAAAGGACTTGAAAATCCAACAGATGGAAAGGGAAATGGAAGAGATAAAGCGAGAAAGAGACATTGCACAATCACTACTTGAATCAGAACGCAAAGCAAAGAAAGTGCAGAAGGGGTCGGAACAATGTGGACCTTCTGGTCAAGTCGCTAGGTGTCTTTCTTTTCCTGGAGAGAATGAAATAGTTCCTTCTCATAGTAGAGATAATCCAGTAACTCCACGGTCTCGAACCAGAGGTGCAAACCGAAGAAAAGCCATGGTAAGGAGATCAGTTACTTCTACAGACCCATCCATGCTTGTGAATGAAATTCGAAAGCTTGAGCAAAGACAGAAGCAGCTTGGTGATGAGGCAAATCGAGCACTTGAAGTGCTGCATAAGGAAGTAGCCTCGCATCAGCTCGGAAATAAAGAAACTGCTGAAACTATAGCAAAGCTTCTGTCTGAAATAAAGGAAATACAAGCTGTTAGATCCATTTCAGAAGAGTCTGTGACCGGAGATGGGGCCAACCTGAAAGATGAGATCAGTCGTTGGCAAACCCAGGCAGAAGATATTAAATCTTTAGAAAGGAAGCTTGAGAACGTTCAGAAATCGATAGACCAGCTGGTTGTTTCATTTTCAAATAGTGTGGAAATTCCAGAATGCAAGGCCCCGTCAAAAAAGAAGAAGATTCTTCCTTTCAACTTGAGCAATAGTCCAAACATGCAGCACCTAATTCGCTCCCCTTGCTCACCTCTGAACCCTTCTCGTAGAGTGATGGAATATGAGACTGAAAACAAGGTTCCTGAGAACAACAATGCTATGCCTAGTGATGAAACAGCGGCTGGGAGATATAAAGTTACTCCACCAAAGAGTGACGAAAATGGTGCCCGTAAGTCATCCAAAGAGGGAAGTCCTGGCGTGCAGCATTCAAACACAGTTAATGTAAAGAAAATGGAGAGGATGTTTAAGAATGCTGCCGAGGAGAATATACGGAGCATTAAATCTTATGTGACTGAGTTAAAAGAACGGGTGACGAAGCTTTCATACCAAAAGCACCTTCTGTTGTGCCAGGTTATTGCATTGGAGAAAGATCAAGATGCTGTAATCGATGAGATGGATAATATAGATGAATCTCTTCCTGGGACATGGGAGTTGACTTTTGAGGAGGACAGGAAGGAAATCATAATGCTGTGGCATCTGTGCCATGTCTCGATCATACACCGCACCCAGTTCTATCTGTTATTCAAGGGAGAACCTTCTGACCAGATCTACATGGAAGTCGAACTCAGAAGATTGCAATGGTTGGAGCAACACTTCTCGGATCTTGGAAATGCAAGCCCCGCTCTTTTAGGCGATGAACCTGCAGGCTCCGTTGCAGCAAGCATCAAGGCTCTCAAGCAAGAGAGGGAGTATTTAGCTAAGAGGGTGAGTTCTAAACTGACAGCGGAAGAGAGAGAAATGTTGTATGCGAAATGGGAGATTCCGCCCGGAGGGAAACAGAGGAGGCTGCAGCTGGTGAACAAGTTGTGGACAGACCCCCATAACATGCAAAACGTGCAGGAAAGCGCTGAAATTGTTGCGAAGCTGGTGGGCTTCTGTGAATCGGGTGAGCACATTAGCAAGGAGATGTTTGAACTCAACTTTGCGCACCCGTCTGATAAGAAGACGTGGATGGGGTGGAACTTGATATCAAATCTTTTGAATCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0000278 GO:0000280 GO:0000281 GO:0000775 GO:0000910 GO:0000911 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0005856 GO:0005871 GO:0005875 GO:0005911 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0007112 GO:0007140 GO:0007275 GO:0007276 GO:0007349 GO:0008150 GO:0009506 GO:0009553 GO:0009555 GO:0009558 GO:0009561 GO:0009653 GO:0009987 GO:0010245 GO:0015630 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0022607 GO:0030054 GO:0032501 GO:0032502 GO:0032504 GO:0032506 GO:0032991 GO:0033206 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043515 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044446 GO:0044464 GO:0044703 GO:0044877 GO:0048229 GO:0048232 GO:0048285 GO:0048609 GO:0048646 GO:0048856 GO:0051225 GO:0051301 GO:0051321 GO:0051704 GO:0055044 GO:0061640 GO:0070925 GO:0071840 GO:0090307 GO:0098687 GO:0140013 GO:0140014 GO:1902410 GO:1902850 GO:1903046 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3490 Kinesin

Protein Analysis

942

Amino Acids

106.0

Weight (kDa)

8.69

Isoelectric Point (pI)

49.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	32 - 164	1.5e-21	Microtubule binding
Kinesin	PF00225	35 - 348	5.8e-101	Kinesin motor domain
DUF3490	PF11995	759 - 922	3.1e-68	Domain of unknown function (DUF3490)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005325)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G43210 AT3G43210 AT3G43210 AT3G43210 AT3G43210
fragaria_vesca	FvH4_1g09380 FvH4_1g09380
malus_domestica	MD02G1101100.v1.1 MD02G1101900.v1.1 MD02G1106600.v1.1 MD15G1223600.v1.1
prunus_persica	Prupe.7G192200_v2.0.a1 Prupe.7G192200_v2.0.a1
pyrus_communis	pycom06g19620 pycom15g19780
rosa_chinensis	RchiOBHm_Chr2g0095931
rosa_laevigata	RLG00000016607
rosa_multiflora	Rmu_co8396839.1_g000001 Rmu_sc0022801.1_g000001 Rmu_sc0025188.1_g000001 Rmu_sc0043120.1_g000001
rosa_roxburghii	Rroxscaffold_2G00145950 Rroxscaffold_2G00145960
rosa_rugosa	Rorug02G0054000
rosa_samantha	Rh2AG103100 Rh2BG104500 Rh2CG107000 Rh2DG104800
rosa_wichuraiana	Rw2G007840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1275
Acc16I	TGCGCA	1 cut(s)	2763
Acc36I	ACCTGC	1 cut(s)	2485
AccB1I	GGYRCC	1 cut(s)	2000
AccB7I	CCANNNNNTGG	1 cut(s)	1162
AccBSI	CCGCTC	2 cut(s)	205, 2459
AccII	CGCG	1 cut(s)	774
AciI	CCGC	9 cut(s)	63, 121, 205, 870, 1955, 2338, 2457, 2561, 2600
AclI	AACGTT	1 cut(s)	1716
AclWI	GGATC	2 cut(s)	1599, 2445
AcsI	RAATTY	5 cut(s)	87, 446, 606, 1443, 1767
AfaI	GTAC	2 cut(s)	799, 970
AfeI	AGCGCT	1 cut(s)	2683
AfiI	CCNNNNNNNGG	6 cut(s)	537, 858, 1162, 1398, 1635, 2606
AhlI	ACTAGT	2 cut(s)	344, 1028
AjiI	CACGTC	1 cut(s)	2784
AjnI	CCWGG	5 cut(s)	1303, 1674, 2029, 2184, 2254
AjuI	GAANNNNNNNTTGG	2 cut(s)	2157, 2189
Alw21I	GWGCWC	5 cut(s)	53, 174, 254, 1498, 2730
Alw26I	GTCTC	4 cut(s)	1191, 1365, 1895, 2329
AlwI	GGATC	2 cut(s)	1599, 2445
AlwNI	CAGNNNCTG	1 cut(s)	1958
Aor51HI	AGCGCT	1 cut(s)	2683
AoxI	GGCC	5 cut(s)	110, 206, 241, 1638, 1782
ApeKI	GCWGC	9 cut(s)	696, 1471, 1507, 1840, 2038, 2090, 2492, 2623, 2626
ApoI	RAATTY	5 cut(s)	87, 446, 606, 1443, 1767
ArsI	GACNNNNNNTTYG	2 cut(s)	1559, 1591
Asp700I	GAANNNNTTC	3 cut(s)	570, 1320, 2250
AspLEI	GCGC	3 cut(s)	776, 2684, 2764
AspS9I	GGNCC	8 cut(s)	207, 242, 540, 717, 754, 1268, 1638, 1783
AsuC2I	CCSGG	4 cut(s)	6, 60, 704, 2604
AsuHPI	GGTGA	6 cut(s)	1490, 1857, 2158, 2554, 2644, 2735
AsuII	TTCGAA	1 cut(s)	1447
AvaII	GGWCC	4 cut(s)	540, 717, 754, 1268
BaeGI	GKGCMC	1 cut(s)	2005
BanI	GGYRCC	1 cut(s)	2000
BarI	GAAGNNNNNNTAC	4 cut(s)	1080, 1112, 2144, 2176
BbsI	GAAGAC	2 cut(s)	924, 2786
Bbv12I	GWGCWC	5 cut(s)	53, 174, 254, 1498, 2730
BbvI	GCAGC	9 cut(s)	708, 1483, 1494, 1852, 2050, 2077, 2504, 2610, 2638
BccI	CCATC	8 cut(s)	551, 788, 1156, 1432, 1628, 1885, 2224, 2782
BcgI	CGANNNNNNTGC	8 cut(s)	6, 40, 1832, 1866, 1982, 2016, 2459, 2493
BciT130I	CCWGG	5 cut(s)	1305, 1676, 2031, 2186, 2256
BcnI	CCSGG	4 cut(s)	6, 60, 704, 2604
BcoDI	GTCTC	4 cut(s)	1191, 1365, 1895, 2329
BcuI	ACTAGT	2 cut(s)	344, 1028
BfaI	CTAG	5 cut(s)	345, 1029, 1133, 1287, 1941
BfmI	CTRYAG	6 cut(s)	177, 926, 1416, 1560, 2478, 2624
BfoI	RGCGCY	1 cut(s)	2685
BfuAI	ACCTGC	1 cut(s)	2485
BglII	AGATCT	2 cut(s)	462, 2382
BlpI	GCTNAGC	1 cut(s)	866
Bme1390I	CCNGG	9 cut(s)	6, 60, 704, 1305, 1676, 2031, 2186, 2256, 2604
Bme18I	GGWCC	4 cut(s)	540, 717, 754, 1268
BmgBI	CACGTC	1 cut(s)	2784
BmgT120I	GGNCC	8 cut(s)	207, 242, 540, 717, 754, 1268, 1638, 1783
BmiI	GGNNCC	9 cut(s)	280, 541, 718, 736, 1639, 1785, 1917, 2002, 2485
BmrFI	CCNGG	9 cut(s)	6, 60, 704, 1305, 1676, 2031, 2186, 2256, 2604
BmrI	ACTGGG	1 cut(s)	2338
BmsI	GCATC	5 cut(s)	676, 1537, 2203, 2320, 2508
BmuI	ACTGGG	1 cut(s)	2338
BpiI	GAAGAC	2 cut(s)	924, 2786
BplI	GAGNNNNNCTC	2 cut(s)	194, 226
BpmI	CTGGAG	1 cut(s)	1326
Bpu1102I	GCTNAGC	1 cut(s)	866
Bpu14I	TTCGAA	1 cut(s)	1447
BpuEI	CTTGAG	5 cut(s)	643, 1475, 1730, 1840, 2495
BpuMI	CCSGG	4 cut(s)	6, 60, 704, 2604
Bsa29I	ATCGAT	2 cut(s)	1727, 2223
BsaI	GGTCTC	1 cut(s)	1365
BsaJI	CCNNGG	8 cut(s)	5, 282, 1035, 1355, 1392, 1674, 2094, 2255
BsaWI	WCCGGW	1 cut(s)	1628
BsaXI	ACNNNNNCTCC	2 cut(s)	2063, 2093
Bsc4I	CCNNNNNNNGG	6 cut(s)	537, 858, 1162, 1398, 1635, 2606
Bse1I	ACTGG	3 cut(s)	738, 1346, 2344
Bse3DI	GCAATG	2 cut(s)	1200, 2420
BseBI	CCWGG	5 cut(s)	1305, 1676, 2031, 2186, 2256
BseCI	ATCGAT	2 cut(s)	1727, 2223
BseDI	CCNNGG	8 cut(s)	5, 282, 1035, 1355, 1392, 1674, 2094, 2255
BseGI	GGATG	7 cut(s)	172, 292, 529, 1424, 2012, 2082, 2793
BseLI	CCNNNNNNNGG	6 cut(s)	537, 858, 1162, 1398, 1635, 2606
BseMI	GCAATG	2 cut(s)	1200, 2420
BseMII	CTCAG	5 cut(s)	272, 632, 1911, 2121, 2416
BseNI	ACTGG	3 cut(s)	738, 1346, 2344
BseRI	GAGGAG	4 cut(s)	95, 2111, 2294, 2632
BseSI	GKGCMC	1 cut(s)	2005
BseXI	GCAGC	9 cut(s)	708, 1483, 1494, 1852, 2050, 2077, 2504, 2610, 2638
BseYI	CCCAGC	2 cut(s)	979, 1958
BsgI	GTGCAG	4 cut(s)	285, 1265, 2057, 2693
Bsh1236I	CGCG	1 cut(s)	774
BshFI	GGCC	5 cut(s)	112, 208, 243, 1640, 1784
BshNI	GGYRCC	1 cut(s)	2000
BshVI	ATCGAT	2 cut(s)	1727, 2223
BsiHKAI	GWGCWC	5 cut(s)	53, 174, 254, 1498, 2730
BsiSI	CCGG	5 cut(s)	5, 59, 703, 1629, 2604
BslFI	GGGAC	5 cut(s)	22, 170, 410, 553, 2272
BslI	CCNNNNNNNGG	6 cut(s)	537, 858, 1162, 1398, 1635, 2606
BsmAI	GTCTC	4 cut(s)	1191, 1365, 1895, 2329
BsmFI	GGGAC	5 cut(s)	22, 170, 410, 553, 2272
BsmI	GAATGC	3 cut(s)	1781, 2041, 2092
BsnI	GGCC	5 cut(s)	112, 208, 243, 1640, 1784
Bso31I	GGTCTC	1 cut(s)	1365
Bsp119I	TTCGAA	1 cut(s)	1447
Bsp1286I	GDGCHC	6 cut(s)	53, 174, 254, 1498, 2005, 2730
Bsp1720I	GCTNAGC	1 cut(s)	866
Bsp19I	CCATGG	1 cut(s)	1392
BspACI	CCGC	9 cut(s)	63, 121, 205, 870, 1955, 2338, 2457, 2561, 2600
BspANI	GGCC	5 cut(s)	112, 208, 243, 1640, 1784
BspCNI	CTCAG	5 cut(s)	271, 631, 1912, 2122, 2415
BspDI	ATCGAT	2 cut(s)	1727, 2223
BspFNI	CGCG	1 cut(s)	774
BspHI	TCATGA	1 cut(s)	199
BspLI	GGNNCC	9 cut(s)	280, 541, 718, 736, 1639, 1785, 1917, 2002, 2485
BspMAI	CTGCAG	3 cut(s)	930, 2482, 2628
BspMI	ACCTGC	1 cut(s)	2485
BspPI	GGATC	2 cut(s)	1599, 2445
BspT104I	TTCGAA	1 cut(s)	1447
BspT107I	GGYRCC	1 cut(s)	2000
BspTNI	GGTCTC	1 cut(s)	1365
BsrBI	CCGCTC	2 cut(s)	205, 2459
BsrDI	GCAATG	2 cut(s)	1200, 2420
BsrI	ACTGG	3 cut(s)	738, 1346, 2344
BssECI	CCNNGG	8 cut(s)	5, 282, 1035, 1355, 1392, 1674, 2094, 2255
BssT1I	CCWWGG	3 cut(s)	282, 1035, 1392
Bst2UI	CCWGG	5 cut(s)	1305, 1676, 2031, 2186, 2256
Bst4CI	ACNGT	7 cut(s)	24, 100, 478, 830, 853, 1359, 2053
Bst6I	CTCTTC	4 cut(s)	1173, 1611, 2256, 2559
BstAPI	GCANNNNNTGC	2 cut(s)	1031, 2671
BstBI	TTCGAA	1 cut(s)	1447
BstC8I	GCNNGC	6 cut(s)	132, 509, 2036, 2452, 2482, 2497
BstDEI	CTNAG	8 cut(s)	30, 258, 618, 866, 1920, 2130, 2402, 2535
BstDSI	CCRYGG	2 cut(s)	1355, 1392
BstF5I	GGATG	7 cut(s)	172, 292, 529, 1424, 2012, 2082, 2793
BstFNI	CGCG	1 cut(s)	774
BstH2I	RGCGCY	1 cut(s)	2685
BstHHI	GCGC	3 cut(s)	776, 2684, 2764
BstMAI	GTCTC	4 cut(s)	1191, 1365, 1895, 2329
BstNI	CCWGG	5 cut(s)	1305, 1676, 2031, 2186, 2256
BstNSI	RCATGY	2 cut(s)	1840, 2665
BstSCI	CCNGG	9 cut(s)	4, 58, 702, 1303, 1674, 2029, 2184, 2254, 2602
BstSFI	CTRYAG	6 cut(s)	177, 926, 1416, 1560, 2478, 2624
BstSLI	GKGCMC	1 cut(s)	2005
BstUI	CGCG	1 cut(s)	774
BstV1I	GCAGC	9 cut(s)	708, 1483, 1494, 1852, 2050, 2077, 2504, 2610, 2638
BstV2I	GAAGAC	2 cut(s)	924, 2786
BstX2I	RGATCY	4 cut(s)	462, 1604, 2382, 2437
BstYI	RGATCY	4 cut(s)	462, 1604, 2382, 2437
Bsu15I	ATCGAT	2 cut(s)	1727, 2223
BsuRI	GGCC	5 cut(s)	112, 208, 243, 1640, 1784
BsuTUI	ATCGAT	2 cut(s)	1727, 2223
BtgI	CCRYGG	2 cut(s)	1355, 1392
BtgZI	GCGATG	1 cut(s)	2484
BtrI	CACGTC	1 cut(s)	2784
BtsCI	GGATG	7 cut(s)	172, 292, 529, 1424, 2012, 2082, 2793
BtsI	GCAGTG	1 cut(s)	396
BtsIMutI	CAGTG	3 cut(s)	82, 378, 396
BveI	ACCTGC	1 cut(s)	2485
Cac8I	GCNNGC	6 cut(s)	132, 509, 2036, 2452, 2482, 2497
CaiI	CAGNNNCTG	1 cut(s)	1958
CciI	TCATGA	1 cut(s)	199
CfoI	GCGC	3 cut(s)	776, 2684, 2764
Cfr13I	GGNCC	8 cut(s)	207, 242, 540, 717, 754, 1268, 1638, 1783
ClaI	ATCGAT	2 cut(s)	1727, 2223
Csp6I	GTAC	2 cut(s)	798, 969
CspCI	CAANNNNNGTGG	2 cut(s)	1743, 1778
CviQI	GTAC	2 cut(s)	798, 969
DdeI	CTNAG	8 cut(s)	30, 258, 618, 866, 1920, 2130, 2402, 2535
DrdI	GACNNNNNNGTC	1 cut(s)	1275
DseDI	GACNNNNNNGTC	1 cut(s)	1275
Eam1104I	CTCTTC	4 cut(s)	1173, 1611, 2256, 2559
EarI	CTCTTC	4 cut(s)	1173, 1611, 2256, 2559
EciI	GGCGGA	1 cut(s)	2589
Eco130I	CCWWGG	3 cut(s)	282, 1035, 1392
Eco31I	GGTCTC	1 cut(s)	1365
Eco32I	GATATC	1 cut(s)	2805
Eco47I	GGWCC	4 cut(s)	540, 717, 754, 1268
Eco47III	AGCGCT	1 cut(s)	2683
EcoO109I	RGGNCCY	1 cut(s)	1783
EcoRII	CCWGG	5 cut(s)	1303, 1674, 2029, 2184, 2254
EcoRV	GATATC	1 cut(s)	2805
EcoT14I	CCWWGG	3 cut(s)	282, 1035, 1392
ErhI	CCWWGG	3 cut(s)	282, 1035, 1392
FaqI	GGGAC	5 cut(s)	22, 170, 410, 553, 2272
FauI	CCCGC	1 cut(s)	2464
FokI	GGATG	7 cut(s)	179, 299, 536, 1411, 1999, 2089, 2800
FspBI	CTAG	5 cut(s)	345, 1029, 1133, 1287, 1941
FspI	TGCGCA	1 cut(s)	2763
GlaI	GCGC	3 cut(s)	775, 2683, 2763
GsaI	CCCAGC	2 cut(s)	983, 1962
GsuI	CTGGAG	1 cut(s)	1326
HaeII	RGCGCY	1 cut(s)	2685
HaeIII	GGCC	5 cut(s)	112, 208, 243, 1640, 1784
HapII	CCGG	5 cut(s)	5, 59, 703, 1629, 2604
HhaI	GCGC	3 cut(s)	776, 2684, 2764
Hin6I	GCGC	3 cut(s)	774, 2682, 2762
HinP1I	GCGC	3 cut(s)	774, 2682, 2762
HincII	GTYRAC	3 cut(s)	484, 840, 2271
HindII	GTYRAC	3 cut(s)	484, 840, 2271
HindIII	AAGCTT	6 cut(s)	726, 863, 1451, 1568, 1706, 2153
HpaII	CCGG	5 cut(s)	5, 59, 703, 1629, 2604
HphI	GGTGA	6 cut(s)	1490, 1857, 2158, 2554, 2644, 2735
Hpy166II	GTNNAC	9 cut(s)	484, 550, 754, 770, 840, 1268, 2271, 2635, 2646
Hpy8I	GTNNAC	9 cut(s)	484, 550, 754, 770, 840, 1268, 2271, 2635, 2646
Hpy99I	CGWCG	1 cut(s)	28
HpyCH4III	ACNGT	7 cut(s)	24, 100, 478, 830, 853, 1359, 2053
HpyCH4IV	ACGT	3 cut(s)	1716, 2670, 2783
HpyF3I	CTNAG	8 cut(s)	30, 258, 618, 866, 1920, 2130, 2402, 2535
HpySE526I	ACGT	3 cut(s)	1716, 2670, 2783
HspAI	GCGC	3 cut(s)	774, 2682, 2762
LmnI	GCTCC	7 cut(s)	56, 278, 734, 1859, 2109, 2422, 2489
Lsp1109I	GCAGC	9 cut(s)	708, 1483, 1494, 1852, 2050, 2077, 2504, 2610, 2638
LweI	GCATC	5 cut(s)	676, 1537, 2203, 2320, 2508
MaeI	CTAG	5 cut(s)	345, 1029, 1133, 1287, 1941
MaeII	ACGT	3 cut(s)	1716, 2670, 2783
MbiI	CCGCTC	2 cut(s)	205, 2459
MflI	RGATCY	4 cut(s)	462, 1604, 2382, 2437
MhlI	GDGCHC	6 cut(s)	53, 174, 254, 1498, 2005, 2730
MlyI	GAGTC	3 cut(s)	37, 521, 1628
MmeI	TCCRAC	3 cut(s)	1180, 1236, 2400
MroXI	GAANNNNTTC	3 cut(s)	570, 1320, 2250
MseI	TTAA	8 cut(s)	599, 825, 986, 1689, 2055, 2082, 2115, 2135
MslI	CAYNNNNRTG	1 cut(s)	1433
MspA1I	CMGCKG	4 cut(s)	1738, 1955, 2561, 2629
MspI	CCGG	5 cut(s)	5, 59, 703, 1629, 2604
MspR9I	CCNGG	9 cut(s)	6, 60, 704, 1305, 1676, 2031, 2186, 2256, 2604
Mva1269I	GAATGC	3 cut(s)	1781, 2041, 2092
MvaI	CCWGG	5 cut(s)	1305, 1676, 2031, 2186, 2256
MvnI	CGCG	1 cut(s)	774
NciI	CCSGG	4 cut(s)	6, 60, 704, 2604
NcoI	CCATGG	1 cut(s)	1392
NlaIV	GGNNCC	9 cut(s)	280, 541, 718, 736, 1639, 1785, 1917, 2002, 2485
NmeAIII	GCCGAG	1 cut(s)	2119
NmuCI	GTSAC	7 cut(s)	818, 887, 1042, 1624, 1988, 2125, 2146
NsbI	TGCGCA	1 cut(s)	2763
NspI	RCATGY	2 cut(s)	1840, 2665
NspV	TTCGAA	1 cut(s)	1447
PagI	TCATGA	1 cut(s)	199
PctI	GAATGC	3 cut(s)	1781, 2041, 2092
PdmI	GAANNNNTTC	3 cut(s)	570, 1320, 2250
PflMI	CCANNNNNTGG	1 cut(s)	1162
PfoI	TCCNGGA	2 cut(s)	702, 1303
PleI	GAGTC	3 cut(s)	37, 521, 1627
PpsI	GAGTC	3 cut(s)	37, 521, 1627
Psp1406I	AACGTT	1 cut(s)	1716
Psp6I	CCWGG	5 cut(s)	1303, 1674, 2029, 2184, 2254
PspFI	CCCAGC	2 cut(s)	979, 1958
PspGI	CCWGG	5 cut(s)	1303, 1674, 2029, 2184, 2254
PspN4I	GGNNCC	9 cut(s)	280, 541, 718, 736, 1639, 1785, 1917, 2002, 2485
PspPI	GGNCC	8 cut(s)	207, 242, 540, 717, 754, 1268, 1638, 1783
PstI	CTGCAG	3 cut(s)	930, 2482, 2628
PstNI	CAGNNNCTG	1 cut(s)	1958
PsuI	RGATCY	4 cut(s)	462, 1604, 2382, 2437
PvuII	CAGCTG	2 cut(s)	1738, 2629
RsaI	GTAC	2 cut(s)	799, 970
RsaNI	GTAC	2 cut(s)	798, 969
RseI	CAYNNNNRTG	1 cut(s)	1433
SaqAI	TTAA	8 cut(s)	599, 825, 986, 1689, 2055, 2082, 2115, 2135
Sau96I	GGNCC	8 cut(s)	207, 242, 540, 717, 754, 1268, 1638, 1783
SbfI	CCTGCAGG	1 cut(s)	2482
SchI	GAGTC	3 cut(s)	37, 521, 1628
ScrFI	CCNGG	9 cut(s)	6, 60, 704, 1305, 1676, 2031, 2186, 2256, 2604
SdaI	CCTGCAGG	1 cut(s)	2482
SduI	GDGCHC	6 cut(s)	53, 174, 254, 1498, 2005, 2730
SfaNI	GCATC	5 cut(s)	676, 1537, 2203, 2320, 2508
SfcI	CTRYAG	6 cut(s)	177, 926, 1416, 1560, 2478, 2624
SfuI	TTCGAA	1 cut(s)	1447
SinI	GGWCC	4 cut(s)	540, 717, 754, 1268
SmiMI	CAYNNNNRTG	1 cut(s)	1433
SmlI	CTYRAG	5 cut(s)	658, 1454, 1709, 1819, 2510
SmoI	CTYRAG	5 cut(s)	658, 1454, 1709, 1819, 2510
SpeI	ACTAGT	2 cut(s)	344, 1028
Sse8387I	CCTGCAGG	1 cut(s)	2482
SsiI	CCGC	9 cut(s)	63, 121, 205, 870, 1955, 2338, 2457, 2561, 2600
SspMI	CTAG	5 cut(s)	345, 1029, 1133, 1287, 1941
StyD4I	CCNGG	9 cut(s)	4, 58, 702, 1303, 1674, 2029, 2184, 2254, 2602
StyI	CCWWGG	3 cut(s)	282, 1035, 1392
TaaI	ACNGT	7 cut(s)	24, 100, 478, 830, 853, 1359, 2053
TaiI	ACGT	3 cut(s)	1719, 2673, 2786
TaqI	TCGA	7 cut(s)	1363, 1447, 1492, 1727, 2223, 2327, 2397
TauI	GCSGC	2 cut(s)	208, 1958
Tru1I	TTAA	8 cut(s)	599, 825, 986, 1689, 2055, 2082, 2115, 2135
Tru9I	TTAA	8 cut(s)	599, 825, 986, 1689, 2055, 2082, 2115, 2135
TscAI	CASTG	3 cut(s)	82, 385, 396
TseFI	GTSAC	7 cut(s)	818, 887, 1042, 1624, 1988, 2125, 2146
TseI	GCWGC	9 cut(s)	696, 1471, 1507, 1840, 2038, 2090, 2492, 2623, 2626
Tsp45I	GTSAC	7 cut(s)	818, 887, 1042, 1624, 1988, 2125, 2146
TspGWI	ACGGA	3 cut(s)	36, 2122, 2476
TspRI	CASTG	3 cut(s)	82, 385, 396
Van91I	CCANNNNNTGG	1 cut(s)	1162
VpaK11BI	GGWCC	4 cut(s)	540, 717, 754, 1268
XapI	RAATTY	5 cut(s)	87, 446, 606, 1443, 1767
XceI	RCATGY	2 cut(s)	1840, 2665
XmnI	GAANNNNTTC	3 cut(s)	570, 1320, 2250
XspI	CTAG	5 cut(s)	345, 1029, 1133, 1287, 1941

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.