Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0005325

Physical Location & Seq

Genomic Coordinates Reverse (-)

83800098 .. 83806282

Gene Structure 6185 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00145950.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1737 bp

ATGAGAATAGCCAGACTTGAAGCAGAGCTGCGGAGTCCAGAGCCTTCTGCGCTTAGGTCCATACTAGAAGAAAAGGACTTGAAAATCAAGCAGATGGAGAGGGAACTGGAAGAGCTAAAGCGACAAAGAGACCTTGCACAATCACAACTTGAATTAGAACGGAAAGTAAACAAAGTGCAGAAGGGAGCGAACCAATGTGGACCTTCTTCTGAAGTTGTCAGGCGTCTTTCTTTTCCAGGAGAGAATGAAACAGTTGCTACTACTCCACAGTCTCGTACAAGAAATGCAGTTCGAAGGCAGTCAATTATGAGGAGATCAGTAACTTCTACAGATCCATCCATGCTTGTGAATGAAATCCGAAAGTTAGAGCAGAGACAGAGGCAGCTCGGTGATGAGGCGAATCGAGCACTTGAAGTACTGCACAAGGAGGTAGCTACCCATCGACTGGGAAATCAGGAAACTACTGAAACTATAGCAAAACTGCTGTCTGAGATAAAGGACATACAAGCAGTTAGCTCCATTCCTGAAGAATCTATGATTGGAGGTGAGACCAATCTGAAAGAAGAGATCACTCGATGGAAATCTCAGGCAGGCAATATTGAATCTTTAGAAAGGAAGCTTGAGAATGTTCAGAAATCTATAGACCAGCTGGCTTCTGCTTTTGCAACTAGTGAGGAAACTTCAGAATGCAAGACCCCGTCAAAAAAGAAGAAACTCCTTCCTTTCACCCTAAGCAATAGTACAAATATGCAGCATCTAATCCGGTCTCCTTGCTCACATATGACCCCTTCACGGAAAGTGATGGATTATGAGACTGAGAACAAGGTGCCTGAGAACAACGACGCTATGCCTAGCGATAACATCGCCATGTCTGGGAGGTCTAAATCTACTCCACCAAAGAGTGATGAAAATGGTACCCGTAAATCATCCAAAGAGAGAAGTCCTGCTGCTCCGCAATCATCAGTTAATGTGAAAAAAATGCAGAGGATGTTCAAGAATGCTGCAGAGGAGAATATACGCAGCATTAGAACTTATGTTACTGAGTTAAAAGAGCGGGTGTTAAAGCTCCAATACCAGAAGAACCTTCTGTTGTGCCAGGTAATTTCAATGGAGGAGGACAAAGAAGCTGGAACAGACGAGACAGATAAAATCGATGAATCTATTCCATTGGCATGGCACCTGACTTTTGAAGAGGATAGAAAAGAAATTGTCATGCTATGGCATTTGTGCCATGTTTCAATTACTCACCGCAGCCAATTTTATCTGTTGTTCAAGGGCGACCCTTCTGATCAGATATACATGGAAGTTGAACTGAGAAGATTGCAGTGGTTGGAACGACATTTCTCTGATCTTGGTAATGCTAGTCCAGCACTTCTAGGTGACGAACCTGCAGGCACTGTTTCAGCAAGTATCAAGGCTCTTAAGCAAGAAAGGGAGTATCTGGCCAAGAGGGTGAGCTCTAAGCTAACAGCAGACGAAAGAGAGATGCTGTATGCGAAATGGGATATCCCTCCAGGCGGAAAACAAAGGAGGCTGCAGCTGGTAAACAAGCTGTGGACTGACCCTCATAACATGCAACATGTACAGGAGAGTGCTGAAATCGTCGCCAAGCTGGTTGGATTCTGTGAATCTGGTGAACCTGCTAGCAAGGAGATGTTCGAACTCAATTTTGCGTGCCCTTCTGATAAGAAGACATGGTTGGGCTGGAATTTGATATCGAATCTTTTAAATCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0000278 GO:0000280 GO:0000281 GO:0000775 GO:0000910 GO:0000911 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0005856 GO:0005871 GO:0005875 GO:0005911 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0007112 GO:0007140 GO:0007275 GO:0007276 GO:0007349 GO:0008150 GO:0009506 GO:0009553 GO:0009555 GO:0009558 GO:0009561 GO:0009653 GO:0009987 GO:0010245 GO:0015630 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0022607 GO:0030054 GO:0032501 GO:0032502 GO:0032504 GO:0032506 GO:0032991 GO:0033206 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043515 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044446 GO:0044464 GO:0044703 GO:0044877 GO:0048229 GO:0048232 GO:0048285 GO:0048609 GO:0048646 GO:0048856 GO:0051225 GO:0051301 GO:0051321 GO:0051704 GO:0055044 GO:0061640 GO:0070925 GO:0071840 GO:0090307 GO:0098687 GO:0140013 GO:0140014 GO:1902410 GO:1902850 GO:1903046 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3490 Kinesin

Protein Analysis

578

Amino Acids

66.05

Weight (kDa)

8.01

Isoelectric Point (pI)

63.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF3490	PF11995	396 - 559	9.3e-68	Domain of unknown function (DUF3490)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005325)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G43210 AT3G43210 AT3G43210 AT3G43210 AT3G43210
fragaria_vesca	FvH4_1g09380 FvH4_1g09380
malus_domestica	MD02G1101100.v1.1 MD02G1101900.v1.1 MD02G1106600.v1.1 MD15G1223600.v1.1
prunus_persica	Prupe.7G192200_v2.0.a1 Prupe.7G192200_v2.0.a1
pyrus_communis	pycom06g19620 pycom15g19780
rosa_chinensis	RchiOBHm_Chr2g0095931
rosa_laevigata	RLG00000016607
rosa_multiflora	Rmu_co8396839.1_g000001 Rmu_sc0022801.1_g000001 Rmu_sc0025188.1_g000001 Rmu_sc0043120.1_g000001
rosa_roxburghii	Rroxscaffold_2G00145950 Rroxscaffold_2G00145960
rosa_rugosa	Rorug02G0054000
rosa_samantha	Rh2AG103100 Rh2BG104500 Rh2CG107000 Rh2DG104800
rosa_wichuraiana	Rw2G007840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1396, 1648
Acc65I	GGTACC	1 cut(s)	914
AccB1I	GGYRCC	3 cut(s)	826, 914, 1176
AccB7I	CCANNNNNTGG	1 cut(s)	445
AccBSI	CCGCTC	1 cut(s)	1054
AciI	CCGC	5 cut(s)	31, 953, 1054, 1249, 1518
AclWI	GGATC	1 cut(s)	326
AcoI	YGGCCR	1 cut(s)	1443
AcsI	RAATTY	1 cut(s)	1708
AcuI	CTGAAG	3 cut(s)	231, 546, 666
AcyI	GRCGYC	1 cut(s)	223
AfaI	GTAC	5 cut(s)	277, 417, 742, 916, 1584
AfiI	CCNNNNNNNGG	4 cut(s)	445, 792, 873, 1517
AflII	CTTAAG	1 cut(s)	1421
AflIII	ACRYGT	1 cut(s)	1579
AhlI	ACTAGT	1 cut(s)	668
AjnI	CCWGG	3 cut(s)	235, 1095, 1513
AjuI	GAANNNNNNNTTGG	4 cut(s)	522, 554, 1682, 1714
Alw21I	GWGCWC	2 cut(s)	409, 1460
Alw26I	GTCTC	7 cut(s)	123, 276, 367, 542, 771, 806, 1133
AlwI	GGATC	1 cut(s)	326
AlwNI	CAGNNNCTG	1 cut(s)	1397
AoxI	GGCC	1 cut(s)	1443
ApeKI	GCWGC	9 cut(s)	28, 382, 751, 947, 1001, 1020, 1251, 1534, 1537
ApoI	RAATTY	1 cut(s)	1708
ArsI	GACNNNNNNTTYG	2 cut(s)	470, 502
Asp700I	GAANNNNTTC	1 cut(s)	1161
Asp718I	GGTACC	1 cut(s)	914
AspLEI	GCGC	1 cut(s)	52
AspS9I	GGNCC	2 cut(s)	57, 200
AsuHPI	GGTGA	7 cut(s)	401, 557, 718, 1238, 1391, 1465, 1646
AsuII	TTCGAA	2 cut(s)	292, 1659
AsuNHI	GCTAGC	1 cut(s)	1643
AvaII	GGWCC	2 cut(s)	57, 200
BaeGI	GKGCMC	1 cut(s)	1679
BalI	TGGCCA	1 cut(s)	1445
BanI	GGYRCC	3 cut(s)	826, 914, 1176
BanII	GRGCYC	1 cut(s)	1460
BbsI	GAAGAC	1 cut(s)	1697
Bbv12I	GWGCWC	2 cut(s)	409, 1460
BbvI	GCAGC	9 cut(s)	15, 394, 763, 934, 988, 1032, 1263, 1521, 1549
BccI	CCATC	5 cut(s)	88, 343, 447, 570, 796
BciT130I	CCWGG	3 cut(s)	237, 1097, 1515
BclI	TGATCA	1 cut(s)	1288
BcoDI	GTCTC	7 cut(s)	123, 276, 367, 542, 771, 806, 1133
BcuI	ACTAGT	1 cut(s)	668
BfaI	CTAG	6 cut(s)	65, 669, 852, 1362, 1376, 1644
BfmI	CTRYAG	6 cut(s)	327, 471, 639, 1002, 1389, 1535
BfrI	CTTAAG	1 cut(s)	1421
BfuAI	ACCTGC	2 cut(s)	1396, 1648
BisI	GCNGC	9 cut(s)	29, 383, 752, 948, 1002, 1021, 1252, 1535, 1538
BlsI	GCNGC	9 cut(s)	30, 384, 753, 949, 1003, 1022, 1253, 1536, 1539
BmcAI	AGTACT	1 cut(s)	417
Bme1390I	CCNGG	3 cut(s)	237, 1097, 1515
Bme18I	GGWCC	2 cut(s)	57, 200
BmgT120I	GGNCC	2 cut(s)	57, 200
BmiI	GGNNCC	3 cut(s)	828, 916, 1178
BmrFI	CCNGG	3 cut(s)	237, 1097, 1515
BmrI	ACTGGG	1 cut(s)	455
BmsI	GCATC	2 cut(s)	763, 1476
BmtI	GCTAGC	1 cut(s)	1647
BmuI	ACTGGG	1 cut(s)	455
BpiI	GAAGAC	1 cut(s)	1697
BpmI	CTGGAG	1 cut(s)	1497
Bpu10I	CCTNAGC	2 cut(s)	53, 731
Bpu14I	TTCGAA	2 cut(s)	292, 1659
BpuEI	CTTGAG	1 cut(s)	641
Bsa29I	ATCGAT	1 cut(s)	1152
BsaBI	GATNNNNATC	1 cut(s)	580
BsaHI	GRCGYC	1 cut(s)	223
BsaI	GGTCTC	3 cut(s)	123, 542, 771
BsaWI	WCCGGW	1 cut(s)	762
Bsc4I	CCNNNNNNNGG	4 cut(s)	445, 792, 873, 1517
Bse1I	ACTGG	2 cut(s)	111, 450
Bse8I	GATNNNNATC	1 cut(s)	580
BseBI	CCWGG	3 cut(s)	237, 1097, 1515
BseCI	ATCGAT	1 cut(s)	1152
BseGI	GGATG	3 cut(s)	335, 926, 993
BseJI	GATNNNNATC	1 cut(s)	580
BseLI	CCNNNNNNNGG	4 cut(s)	445, 792, 873, 1517
BseMII	CTCAG	6 cut(s)	480, 599, 807, 822, 1032, 1304
BseNI	ACTGG	2 cut(s)	111, 450
BseRI	GAGGAG	3 cut(s)	325, 1022, 1127
BseSI	GKGCMC	1 cut(s)	1679
BseXI	GCAGC	9 cut(s)	15, 394, 763, 934, 988, 1032, 1263, 1521, 1549
BsgI	GTGCAG	2 cut(s)	197, 404
BshFI	GGCC	1 cut(s)	1445
BshNI	GGYRCC	3 cut(s)	826, 914, 1176
BshVI	ATCGAT	1 cut(s)	1152
BsiHKAI	GWGCWC	2 cut(s)	409, 1460
BsiSI	CCGG	1 cut(s)	763
BslI	CCNNNNNNNGG	4 cut(s)	445, 792, 873, 1517
BsmAI	GTCTC	7 cut(s)	123, 276, 367, 542, 771, 806, 1133
BsmI	GAATGC	2 cut(s)	692, 1003
BsnI	GGCC	1 cut(s)	1445
Bso31I	GGTCTC	3 cut(s)	123, 542, 771
Bsp119I	TTCGAA	2 cut(s)	292, 1659
Bsp1286I	GDGCHC	3 cut(s)	409, 1460, 1679
Bsp1407I	TGTACA	1 cut(s)	1582
Bsp143I	GATC	5 cut(s)	314, 331, 567, 1288, 1348
BspACI	CCGC	5 cut(s)	31, 953, 1054, 1249, 1518
BspANI	GGCC	1 cut(s)	1445
BspCNI	CTCAG	6 cut(s)	481, 598, 808, 823, 1033, 1305
BspDI	ATCGAT	1 cut(s)	1152
BspLI	GGNNCC	3 cut(s)	828, 916, 1178
BspMAI	CTGCAG	3 cut(s)	1006, 1393, 1539
BspMI	ACCTGC	2 cut(s)	1396, 1648
BspOI	GCTAGC	1 cut(s)	1647
BspPI	GGATC	1 cut(s)	326
BspQI	GCTCTTC	1 cut(s)	105
BspT104I	TTCGAA	2 cut(s)	292, 1659
BspT107I	GGYRCC	3 cut(s)	826, 914, 1176
BspTI	CTTAAG	1 cut(s)	1421
BspTNI	GGTCTC	3 cut(s)	123, 542, 771
BsrBI	CCGCTC	1 cut(s)	1054
BsrGI	TGTACA	1 cut(s)	1582
BsrI	ACTGG	2 cut(s)	111, 450
BssMI	GATC	5 cut(s)	314, 331, 567, 1288, 1348
BssNI	GRCGYC	1 cut(s)	223
Bst2UI	CCWGG	3 cut(s)	237, 1097, 1515
Bst4CI	ACNGT	3 cut(s)	253, 270, 1399
Bst6I	CTCTTC	3 cut(s)	105, 558, 1185
BstACI	GRCGYC	1 cut(s)	223
BstAFI	CTTAAG	1 cut(s)	1421
BstAUI	TGTACA	1 cut(s)	1582
BstBI	TTCGAA	2 cut(s)	292, 1659
BstC8I	GCNNGC	5 cut(s)	592, 651, 1393, 1645, 1675
BstDEI	CTNAG	9 cut(s)	53, 489, 585, 731, 816, 831, 1041, 1313, 1461
BstF5I	GGATG	3 cut(s)	335, 926, 993
BstHHI	GCGC	1 cut(s)	52
BstKTI	GATC	5 cut(s)	317, 334, 570, 1291, 1351
BstMAI	GTCTC	7 cut(s)	123, 276, 367, 542, 771, 806, 1133
BstMBI	GATC	5 cut(s)	314, 331, 567, 1288, 1348
BstMWI	GCNNNNNNNGC	3 cut(s)	49, 404, 1367
BstNI	CCWGG	3 cut(s)	237, 1097, 1515
BstNSI	RCATGY	2 cut(s)	1576, 1583
BstSCI	CCNGG	3 cut(s)	235, 1095, 1513
BstSFI	CTRYAG	6 cut(s)	327, 471, 639, 1002, 1389, 1535
BstSLI	GKGCMC	1 cut(s)	1679
BstV1I	GCAGC	9 cut(s)	15, 394, 763, 934, 988, 1032, 1263, 1521, 1549
BstV2I	GAAGAC	1 cut(s)	1697
BstX2I	RGATCY	1 cut(s)	331
BstXI	CCANNNNNNTGG	1 cut(s)	1173
BstYI	RGATCY	1 cut(s)	331
Bsu15I	ATCGAT	1 cut(s)	1152
BsuRI	GGCC	1 cut(s)	1445
BsuTUI	ATCGAT	1 cut(s)	1152
BtgZI	GCGATG	1 cut(s)	847
BtsCI	GGATG	3 cut(s)	335, 926, 993
BtsI	GCAGTG	1 cut(s)	1331
BtsIMutI	CAGTG	2 cut(s)	1331, 1395
BveI	ACCTGC	2 cut(s)	1396, 1648
Cac8I	GCNNGC	5 cut(s)	592, 651, 1393, 1645, 1675
CaiI	CAGNNNCTG	1 cut(s)	1397
CfoI	GCGC	1 cut(s)	52
Cfr13I	GGNCC	2 cut(s)	57, 200
ClaI	ATCGAT	1 cut(s)	1152
CseI	GACGC	2 cut(s)	212, 851
Csp6I	GTAC	5 cut(s)	276, 416, 741, 915, 1583
CviAII	CATG	9 cut(s)	340, 868, 1173, 1213, 1232, 1300, 1573, 1580, 1695
CviQI	GTAC	5 cut(s)	276, 416, 741, 915, 1583
DdeI	CTNAG	9 cut(s)	53, 489, 585, 731, 816, 831, 1041, 1313, 1461
DpnI	GATC	5 cut(s)	316, 333, 569, 1290, 1350
DpnII	GATC	5 cut(s)	314, 331, 567, 1288, 1348
DraI	TTTAAA	1 cut(s)	1728
EaeI	YGGCCR	1 cut(s)	1443
Eam1104I	CTCTTC	3 cut(s)	105, 558, 1185
EarI	CTCTTC	3 cut(s)	105, 558, 1185
EciI	GGCGGA	1 cut(s)	1533
Ecl136II	GAGCTC	1 cut(s)	1458
Eco24I	GRGCYC	1 cut(s)	1460
Eco31I	GGTCTC	3 cut(s)	123, 542, 771
Eco32I	GATATC	2 cut(s)	1507, 1716
Eco47I	GGWCC	2 cut(s)	57, 200
Eco53kI	GAGCTC	1 cut(s)	1458
Eco57I	CTGAAG	3 cut(s)	231, 546, 666
EcoICRI	GAGCTC	1 cut(s)	1458
EcoRII	CCWGG	3 cut(s)	235, 1095, 1513
EcoRV	GATATC	2 cut(s)	1507, 1716
EcoT38I	GRGCYC	1 cut(s)	1460
FaeI	CATG	9 cut(s)	343, 871, 1176, 1216, 1235, 1303, 1576, 1583, 1698
FatI	CATG	9 cut(s)	339, 867, 1172, 1212, 1231, 1299, 1572, 1579, 1694
FauI	CCCGC	1 cut(s)	1047
FauNDI	CATATG	1 cut(s)	780
FbaI	TGATCA	1 cut(s)	1288
Fnu4HI	GCNGC	9 cut(s)	29, 383, 752, 948, 1002, 1021, 1252, 1535, 1538
FokI	GGATG	3 cut(s)	322, 913, 1000
FriOI	GRGCYC	1 cut(s)	1460
Fsp4HI	GCNGC	9 cut(s)	29, 383, 752, 948, 1002, 1021, 1252, 1535, 1538
FspBI	CTAG	6 cut(s)	65, 669, 852, 1362, 1376, 1644
GlaI	GCGC	1 cut(s)	51
GluI	GCNGC	9 cut(s)	29, 383, 752, 948, 1002, 1021, 1252, 1535, 1538
GsuI	CTGGAG	1 cut(s)	1497
HaeIII	GGCC	1 cut(s)	1445
HapII	CCGG	1 cut(s)	763
HgaI	GACGC	2 cut(s)	212, 851
HhaI	GCGC	1 cut(s)	52
Hin1I	GRCGYC	1 cut(s)	223
Hin1II	CATG	9 cut(s)	343, 871, 1176, 1216, 1235, 1303, 1576, 1583, 1698
Hin6I	GCGC	1 cut(s)	50
HinP1I	GCGC	1 cut(s)	50
HindIII	AAGCTT	1 cut(s)	617
HinfI	GANTC	8 cut(s)	34, 400, 530, 602, 1157, 1620, 1628, 1720
HpaII	CCGG	1 cut(s)	763
HphI	GGTGA	7 cut(s)	401, 557, 718, 1238, 1391, 1465, 1646
Hpy166II	GTNNAC	5 cut(s)	169, 200, 1546, 1557, 1637
Hpy188III	TCNNGA	4 cut(s)	38, 455, 524, 994
Hpy8I	GTNNAC	5 cut(s)	169, 200, 1546, 1557, 1637
Hpy99I	CGWCG	2 cut(s)	845, 1607
HpyAV	CCTTC	9 cut(s)	54, 175, 213, 288, 728, 798, 1094, 1293, 1689
HpyCH4III	ACNGT	3 cut(s)	253, 270, 1399
HpyF10VI	GCNNNNNNNGC	3 cut(s)	49, 404, 1367
HpyF3I	CTNAG	9 cut(s)	53, 489, 585, 731, 816, 831, 1041, 1313, 1461
Hsp92I	GRCGYC	1 cut(s)	223
Hsp92II	CATG	9 cut(s)	343, 871, 1176, 1216, 1235, 1303, 1576, 1583, 1698
HspAI	GCGC	1 cut(s)	50
KpnI	GGTACC	1 cut(s)	918
Ksp22I	TGATCA	1 cut(s)	1288
Kzo9I	GATC	5 cut(s)	314, 331, 567, 1288, 1348
LguI	GCTCTTC	1 cut(s)	105
LmnI	GCTCC	4 cut(s)	185, 521, 955, 1071
Lsp1109I	GCAGC	9 cut(s)	15, 394, 763, 934, 988, 1032, 1263, 1521, 1549
LweI	GCATC	2 cut(s)	763, 1476
MaeI	CTAG	6 cut(s)	65, 669, 852, 1362, 1376, 1644
MaeIII	GTNAC	3 cut(s)	319, 1036, 1379
MalI	GATC	5 cut(s)	316, 333, 569, 1290, 1350
MbiI	CCGCTC	1 cut(s)	1054
MboI	GATC	5 cut(s)	314, 331, 567, 1288, 1348
MflI	RGATCY	1 cut(s)	331
MhlI	GDGCHC	3 cut(s)	409, 1460, 1679
MlsI	TGGCCA	1 cut(s)	1445
MluCI	AATT	8 cut(s)	152, 303, 1101, 1206, 1239, 1256, 1666, 1708
MluNI	TGGCCA	1 cut(s)	1445
MlyI	GAGTC	1 cut(s)	43
MmeI	TCCRAC	2 cut(s)	1311, 1597
Mox20I	TGGCCA	1 cut(s)	1445
MroXI	GAANNNNTTC	1 cut(s)	1161
MscI	TGGCCA	1 cut(s)	1445
MseI	TTAA	5 cut(s)	966, 1046, 1061, 1422, 1727
MslI	CAYNNNNRTG	3 cut(s)	344, 866, 1171
Msp20I	TGGCCA	1 cut(s)	1445
MspA1I	CMGCKG	2 cut(s)	649, 1540
MspCI	CTTAAG	1 cut(s)	1421
MspI	CCGG	1 cut(s)	763
MspR9I	CCNGG	3 cut(s)	237, 1097, 1515
Mva1269I	GAATGC	2 cut(s)	692, 1003
MvaI	CCWGG	3 cut(s)	237, 1097, 1515
MwoI	GCNNNNNNNGC	3 cut(s)	49, 404, 1367
NdeI	CATATG	1 cut(s)	780
NdeII	GATC	5 cut(s)	314, 331, 567, 1288, 1348
NheI	GCTAGC	1 cut(s)	1643
NlaIII	CATG	9 cut(s)	343, 871, 1176, 1216, 1235, 1303, 1576, 1583, 1698
NlaIV	GGNNCC	3 cut(s)	828, 916, 1178
NmuCI	GTSAC	1 cut(s)	1379
NspI	RCATGY	2 cut(s)	1576, 1583
NspV	TTCGAA	2 cut(s)	292, 1659
PciI	ACATGT	1 cut(s)	1579
PciSI	GCTCTTC	1 cut(s)	105
PctI	GAATGC	2 cut(s)	692, 1003
PdmI	GAANNNNTTC	1 cut(s)	1161
PfeI	GAWTC	7 cut(s)	400, 530, 602, 1157, 1620, 1628, 1720
PflFI	GACNNNGTC	1 cut(s)	697
PflMI	CCANNNNNTGG	1 cut(s)	445
PfoI	TCCNGGA	1 cut(s)	235
PkrI	GCNGC	9 cut(s)	30, 384, 753, 949, 1003, 1022, 1253, 1536, 1539
PleI	GAGTC	1 cut(s)	42
PpsI	GAGTC	1 cut(s)	42
PscI	ACATGT	1 cut(s)	1579
Psp124BI	GAGCTC	1 cut(s)	1460
Psp6I	CCWGG	3 cut(s)	235, 1095, 1513
PspGI	CCWGG	3 cut(s)	235, 1095, 1513
PspN4I	GGNNCC	3 cut(s)	828, 916, 1178
PspPI	GGNCC	2 cut(s)	57, 200
PsrI	GAACNNNNNNTAC	2 cut(s)	1021, 1053
PstI	CTGCAG	3 cut(s)	1006, 1393, 1539
PstNI	CAGNNNCTG	1 cut(s)	1397
PsuI	RGATCY	1 cut(s)	331
PsyI	GACNNNGTC	1 cut(s)	697
PvuII	CAGCTG	2 cut(s)	649, 1540
RsaI	GTAC	5 cut(s)	277, 417, 742, 916, 1584
RsaNI	GTAC	5 cut(s)	276, 416, 741, 915, 1583
RseI	CAYNNNNRTG	3 cut(s)	344, 866, 1171
SacI	GAGCTC	1 cut(s)	1460
SapI	GCTCTTC	1 cut(s)	105
SaqAI	TTAA	5 cut(s)	966, 1046, 1061, 1422, 1727
SatI	GCNGC	9 cut(s)	29, 383, 752, 948, 1002, 1021, 1252, 1535, 1538
Sau3AI	GATC	5 cut(s)	314, 331, 567, 1288, 1348
Sau96I	GGNCC	2 cut(s)	57, 200
SbfI	CCTGCAGG	1 cut(s)	1393
ScaI	AGTACT	1 cut(s)	417
SchI	GAGTC	1 cut(s)	43
ScrFI	CCNGG	3 cut(s)	237, 1097, 1515
SdaI	CCTGCAGG	1 cut(s)	1393
SduI	GDGCHC	3 cut(s)	409, 1460, 1679
SfaNI	GCATC	2 cut(s)	763, 1476
SfcI	CTRYAG	6 cut(s)	327, 471, 639, 1002, 1389, 1535
SfuI	TTCGAA	2 cut(s)	292, 1659
SinI	GGWCC	2 cut(s)	57, 200
SmiMI	CAYNNNNRTG	3 cut(s)	344, 866, 1171
SmlI	CTYRAG	2 cut(s)	620, 1421
SmoI	CTYRAG	2 cut(s)	620, 1421
SpeI	ACTAGT	1 cut(s)	668
Sse8387I	CCTGCAGG	1 cut(s)	1393
Sse9I	AATT	8 cut(s)	152, 303, 1101, 1206, 1239, 1256, 1666, 1708
SsiI	CCGC	5 cut(s)	31, 953, 1054, 1249, 1518
SspI	AATATT	1 cut(s)	598
SspMI	CTAG	6 cut(s)	65, 669, 852, 1362, 1376, 1644
SstI	GAGCTC	1 cut(s)	1460
StyD4I	CCNGG	3 cut(s)	235, 1095, 1513
TaaI	ACNGT	3 cut(s)	253, 270, 1399
TaqI	TCGA	7 cut(s)	292, 403, 442, 574, 1152, 1659, 1718
TasI	AATT	8 cut(s)	152, 303, 1101, 1206, 1239, 1256, 1666, 1708
TatI	WGTACW	3 cut(s)	415, 740, 1582
TfiI	GAWTC	7 cut(s)	400, 530, 602, 1157, 1620, 1628, 1720
Tru1I	TTAA	5 cut(s)	966, 1046, 1061, 1422, 1727
Tru9I	TTAA	5 cut(s)	966, 1046, 1061, 1422, 1727
TscAI	CASTG	2 cut(s)	1331, 1402
TseFI	GTSAC	1 cut(s)	1379
TseI	GCWGC	9 cut(s)	28, 382, 751, 947, 1001, 1020, 1251, 1534, 1537
Tsp45I	GTSAC	1 cut(s)	1379
TspDTI	ATGAA	4 cut(s)	261, 366, 921, 1170
TspGWI	ACGGA	2 cut(s)	175, 808
TspRI	CASTG	2 cut(s)	1331, 1402
Tth111I	GACNNNGTC	1 cut(s)	697
Van91I	CCANNNNNTGG	1 cut(s)	445
Vha464I	CTTAAG	1 cut(s)	1421
VpaK11BI	GGWCC	2 cut(s)	57, 200
XapI	RAATTY	1 cut(s)	1708
XceI	RCATGY	2 cut(s)	1576, 1583
XmnI	GAANNNNTTC	1 cut(s)	1161
XspI	CTAG	6 cut(s)	65, 669, 852, 1362, 1376, 1644
ZrmI	AGTACT	1 cut(s)	417

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.