Rmu_sc0043120.1_g000001
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0043120.1
Physical Location & Seq
Reverse (-)
882 .. 2567
1686 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0043120.1_g000001.1.cds

Sequence Viewer

Length: 1203 bp
atgattggaggtgagaccaatctgaaagaagagatcactcgatggaaatctcaggcaggcaatattgaatctttggaaaggaagcttgagaatgttcagaaatctatagaccagctggcttctgcttttgcaactagtgaggaaacttcagaatgcaagaccccgtcaaaaaagaagaaactccttcctttcaccctaagcaatagtacaaatatgcagcatctaatccggtctccttgctcacctatgaccccttcgcggaaagtgatggattatgagactgagaacaaggtgcctgagaacaacgatgctatgcctagcgataacatcgccatgtctgggaggtctaaatctactccaccaaagagtgatgaaaatggtacccgtaaatcatccaaagagagaagtcctgctgctccgcaatcatcagttaatgtgaaaaaaatgcagaggatgttcaagaatgctgcagaggagaatatacgcagcattagaacttatgttactgagttaaaagagcgggtattaaagctccaataccagaagaaccttctgttgtgccaggtaatttcaatggaggaggacaaagaagctggaacagacgagacagataaaatcgatgaatctattccattggcatggcacctgacttttgaagaggatagaaaagaaattgtcatgctatggcatttgtgccatgtttcaattactcaccgcagccaattttatctgttgttcaagggcgacccttctgatcagatatacatggaagttgaactgagaagattgcagtggttggaacgacatttctccgatcttggtaatgctagtccagcacttctaggtgacgaacctgcaggcactgtttcagcaagtatcaaggctcttaagcaagaaagggagtatctggccaagagggtgagctctaagctaacagcagacgaaagagagatgctgtatgcgaaatgggatatccctccaggtggaaaacaaaggaggctgcagctggtaaacaagctgtggactgaccctcataacatgcaacatgtacaggagagtgctgaaatcgtcgccaagctggttggattctgtgaatctggtgaacctgctagcaaggagatgttcgaactcaattttgcgtgcccttctgataagaagacatggttgggctggaatttgatatcgaatcttttaaatctgtaa

Protein Analysis

400

Amino Acids

45.65

Weight (kDa)

6.74

Isoelectric Point (pI)

61.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 862, 1114
Acc65I GGTACC 1 cut(s) 380
AccB1I GGYRCC 3 cut(s) 292, 380, 642
AccBSI CCGCTC 1 cut(s) 520
AccII CGCG 1 cut(s) 259
AciI CCGC 4 cut(s) 259, 419, 520, 715
AcoI YGGCCR 1 cut(s) 909
AcsI RAATTY 1 cut(s) 1174
AcuI CTGAAG 1 cut(s) 132
AfaI GTAC 3 cut(s) 208, 382, 1050
AfiI CCNNNNNNNGG 3 cut(s) 258, 339, 983
AflII CTTAAG 1 cut(s) 887
AflIII ACRYGT 1 cut(s) 1045
AgsI TTSAA 7 cut(s) 68, 460, 573, 656, 705, 739, 776
AhlI ACTAGT 1 cut(s) 134
AjnI CCWGG 2 cut(s) 561, 979
AjuI GAANNNNNNNTTGG 2 cut(s) 1148, 1180
AluBI AGCT 9 cut(s) 85, 115, 532, 593, 924, 931, 1006, 1018, 1078
AluI AGCT 9 cut(s) 85, 115, 532, 593, 924, 931, 1006, 1018, 1078
Alw21I GWGCWC 1 cut(s) 926
Alw26I GTCTC 4 cut(s) 8, 237, 272, 599
AlwNI CAGNNNCTG 1 cut(s) 863
AoxI GGCC 1 cut(s) 909
ApeKI GCWGC 7 cut(s) 217, 413, 467, 486, 717, 1000, 1003
ApoI RAATTY 1 cut(s) 1174
Asp700I GAANNNNTTC 1 cut(s) 627
Asp718I GGTACC 1 cut(s) 380
AsuHPI GGTGA 7 cut(s) 23, 184, 234, 704, 857, 931, 1112
AsuII TTCGAA 1 cut(s) 1125
AsuNHI GCTAGC 1 cut(s) 1109
BaeGI GKGCMC 1 cut(s) 1145
BalI TGGCCA 1 cut(s) 911
BanI GGYRCC 3 cut(s) 292, 380, 642
BanII GRGCYC 1 cut(s) 926
BbsI GAAGAC 1 cut(s) 1163
Bbv12I GWGCWC 1 cut(s) 926
BbvI GCAGC 7 cut(s) 229, 400, 454, 498, 729, 987, 1015
BccI CCATC 2 cut(s) 36, 262
BciT130I CCWGG 2 cut(s) 563, 981
BclI TGATCA 1 cut(s) 754
BcoDI GTCTC 4 cut(s) 8, 237, 272, 599
BcuI ACTAGT 1 cut(s) 134
BfaI CTAG 5 cut(s) 135, 318, 828, 842, 1110
BfmI CTRYAG 4 cut(s) 105, 468, 855, 1001
BfrI CTTAAG 1 cut(s) 887
BfuAI ACCTGC 2 cut(s) 862, 1114
BisI GCNGC 7 cut(s) 218, 414, 468, 487, 718, 1001, 1004
BlsI GCNGC 7 cut(s) 219, 415, 469, 488, 719, 1002, 1005
Bme1390I CCNGG 2 cut(s) 563, 981
BmiI GGNNCC 3 cut(s) 294, 382, 644
BmrFI CCNGG 2 cut(s) 563, 981
BmsI GCATC 3 cut(s) 229, 298, 942
BmtI GCTAGC 1 cut(s) 1113
BpiI GAAGAC 1 cut(s) 1163
BpmI CTGGAG 1 cut(s) 963
Bpu10I CCTNAGC 1 cut(s) 197
Bpu14I TTCGAA 1 cut(s) 1125
BpuEI CTTGAG 1 cut(s) 107
Bsa29I ATCGAT 1 cut(s) 618
BsaBI GATNNNNATC 1 cut(s) 46
BsaI GGTCTC 2 cut(s) 8, 237
BsaWI WCCGGW 1 cut(s) 228
Bsc4I CCNNNNNNNGG 3 cut(s) 258, 339, 983
Bse8I GATNNNNATC 1 cut(s) 46
BseBI CCWGG 2 cut(s) 563, 981
BseCI ATCGAT 1 cut(s) 618
BseGI GGATG 2 cut(s) 392, 459
BseJI GATNNNNATC 1 cut(s) 46
BseLI CCNNNNNNNGG 3 cut(s) 258, 339, 983
BseMII CTCAG 5 cut(s) 65, 273, 288, 498, 770
BseRI GAGGAG 2 cut(s) 488, 593
BseSI GKGCMC 1 cut(s) 1145
BseXI GCAGC 7 cut(s) 229, 400, 454, 498, 729, 987, 1015
Bsh1236I CGCG 1 cut(s) 259
BshFI GGCC 1 cut(s) 911
BshNI GGYRCC 3 cut(s) 292, 380, 642
BshVI ATCGAT 1 cut(s) 618
BsiHKAI GWGCWC 1 cut(s) 926
BsiSI CCGG 1 cut(s) 229
BslI CCNNNNNNNGG 3 cut(s) 258, 339, 983
BsmAI GTCTC 4 cut(s) 8, 237, 272, 599
BsmI GAATGC 2 cut(s) 158, 469
BsnI GGCC 1 cut(s) 911
Bso31I GGTCTC 2 cut(s) 8, 237
Bsp119I TTCGAA 1 cut(s) 1125
Bsp1286I GDGCHC 2 cut(s) 926, 1145
Bsp1407I TGTACA 1 cut(s) 1048
Bsp143I GATC 3 cut(s) 33, 754, 814
BspACI CCGC 4 cut(s) 259, 419, 520, 715
BspANI GGCC 1 cut(s) 911
BspCNI CTCAG 5 cut(s) 64, 274, 289, 499, 771
BspDI ATCGAT 1 cut(s) 618
BspFNI CGCG 1 cut(s) 259
BspLI GGNNCC 3 cut(s) 294, 382, 644
BspMAI CTGCAG 3 cut(s) 472, 859, 1005
BspMI ACCTGC 2 cut(s) 862, 1114
BspOI GCTAGC 1 cut(s) 1113
BspT104I TTCGAA 1 cut(s) 1125
BspT107I GGYRCC 3 cut(s) 292, 380, 642
BspTI CTTAAG 1 cut(s) 887
BspTNI GGTCTC 2 cut(s) 8, 237
BsrBI CCGCTC 1 cut(s) 520
BsrGI TGTACA 1 cut(s) 1048
BssMI GATC 3 cut(s) 33, 754, 814
Bst2UI CCWGG 2 cut(s) 563, 981
Bst4CI ACNGT 1 cut(s) 865
Bst6I CTCTTC 2 cut(s) 24, 651
BstAFI CTTAAG 1 cut(s) 887
BstAUI TGTACA 1 cut(s) 1048
BstBI TTCGAA 1 cut(s) 1125
BstC8I GCNNGC 5 cut(s) 58, 117, 859, 1111, 1141
BstDEI CTNAG 7 cut(s) 51, 197, 282, 297, 507, 779, 927
BstF5I GGATG 2 cut(s) 392, 459
BstFNI CGCG 1 cut(s) 259
BstKTI GATC 3 cut(s) 36, 757, 817
BstMAI GTCTC 4 cut(s) 8, 237, 272, 599
BstMBI GATC 3 cut(s) 33, 754, 814
BstMWI GCNNNNNNNGC 1 cut(s) 833
BstNI CCWGG 2 cut(s) 563, 981
BstNSI RCATGY 2 cut(s) 1042, 1049
BstSCI CCNGG 2 cut(s) 561, 979
BstSFI CTRYAG 4 cut(s) 105, 468, 855, 1001
BstSLI GKGCMC 1 cut(s) 1145
BstUI CGCG 1 cut(s) 259
BstV1I GCAGC 7 cut(s) 229, 400, 454, 498, 729, 987, 1015
BstV2I GAAGAC 1 cut(s) 1163
BstXI CCANNNNNNTGG 1 cut(s) 639
Bsu15I ATCGAT 1 cut(s) 618
BsuRI GGCC 1 cut(s) 911
BsuTUI ATCGAT 1 cut(s) 618
BtgZI GCGATG 1 cut(s) 313
BtsCI GGATG 2 cut(s) 392, 459
BtsI GCAGTG 1 cut(s) 797
BtsIMutI CAGTG 2 cut(s) 797, 861
BveI ACCTGC 2 cut(s) 862, 1114
Cac8I GCNNGC 5 cut(s) 58, 117, 859, 1111, 1141
CaiI CAGNNNCTG 1 cut(s) 863
ClaI ATCGAT 1 cut(s) 618
Csp6I GTAC 3 cut(s) 207, 381, 1049
CviAII CATG 8 cut(s) 334, 639, 679, 698, 766, 1039, 1046, 1161
CviQI GTAC 3 cut(s) 207, 381, 1049
DdeI CTNAG 7 cut(s) 51, 197, 282, 297, 507, 779, 927
DpnI GATC 3 cut(s) 35, 756, 816
DpnII GATC 3 cut(s) 33, 754, 814
DraI TTTAAA 1 cut(s) 1194
EaeI YGGCCR 1 cut(s) 909
Eam1104I CTCTTC 2 cut(s) 24, 651
EarI CTCTTC 2 cut(s) 24, 651
Ecl136II GAGCTC 1 cut(s) 924
Eco24I GRGCYC 1 cut(s) 926
Eco31I GGTCTC 2 cut(s) 8, 237
Eco32I GATATC 2 cut(s) 973, 1182
Eco53kI GAGCTC 1 cut(s) 924
Eco57I CTGAAG 1 cut(s) 132
EcoICRI GAGCTC 1 cut(s) 924
EcoRII CCWGG 2 cut(s) 561, 979
EcoRV GATATC 2 cut(s) 973, 1182
EcoT38I GRGCYC 1 cut(s) 926
FaeI CATG 8 cut(s) 337, 642, 682, 701, 769, 1042, 1049, 1164
FatI CATG 8 cut(s) 333, 638, 678, 697, 765, 1038, 1045, 1160
FauI CCCGC 1 cut(s) 513
FbaI TGATCA 1 cut(s) 754
Fnu4HI GCNGC 7 cut(s) 218, 414, 468, 487, 718, 1001, 1004
FokI GGATG 2 cut(s) 379, 466
FriOI GRGCYC 1 cut(s) 926
Fsp4HI GCNGC 7 cut(s) 218, 414, 468, 487, 718, 1001, 1004
FspBI CTAG 5 cut(s) 135, 318, 828, 842, 1110
GluI GCNGC 7 cut(s) 218, 414, 468, 487, 718, 1001, 1004
GsuI CTGGAG 1 cut(s) 963
HaeIII GGCC 1 cut(s) 911
HapII CCGG 1 cut(s) 229
Hin1II CATG 8 cut(s) 337, 642, 682, 701, 769, 1042, 1049, 1164
HindIII AAGCTT 1 cut(s) 83
HinfI GANTC 5 cut(s) 68, 623, 1086, 1094, 1186
HpaII CCGG 1 cut(s) 229
HphI GGTGA 7 cut(s) 23, 184, 234, 704, 857, 931, 1112
Hpy166II GTNNAC 3 cut(s) 1012, 1023, 1103
Hpy188I TCNGA 7 cut(s) 24, 99, 151, 754, 759, 814, 1150
Hpy188III TCNNGA 1 cut(s) 460
Hpy8I GTNNAC 3 cut(s) 1012, 1023, 1103
Hpy99I CGWCG 1 cut(s) 1073
HpyAV CCTTC 5 cut(s) 194, 264, 560, 759, 1155
HpyCH4III ACNGT 1 cut(s) 865
HpyCH4V TGCA 9 cut(s) 131, 156, 217, 448, 470, 790, 857, 1003, 1042
HpyF10VI GCNNNNNNNGC 1 cut(s) 833
HpyF3I CTNAG 7 cut(s) 51, 197, 282, 297, 507, 779, 927
Hsp92II CATG 8 cut(s) 337, 642, 682, 701, 769, 1042, 1049, 1164
KpnI GGTACC 1 cut(s) 384
Ksp22I TGATCA 1 cut(s) 754
Kzo9I GATC 3 cut(s) 33, 754, 814
LmnI GCTCC 2 cut(s) 421, 537
Lsp1109I GCAGC 7 cut(s) 229, 400, 454, 498, 729, 987, 1015
LweI GCATC 3 cut(s) 229, 298, 942
MaeI CTAG 5 cut(s) 135, 318, 828, 842, 1110
MaeIII GTNAC 2 cut(s) 502, 845
MalI GATC 3 cut(s) 35, 756, 816
MbiI CCGCTC 1 cut(s) 520
MboI GATC 3 cut(s) 33, 754, 814
MboII GAAGA 6 cut(s) 41, 187, 556, 668, 795, 1168
MhlI GDGCHC 2 cut(s) 926, 1145
MlsI TGGCCA 1 cut(s) 911
MluCI AATT 6 cut(s) 567, 672, 705, 722, 1132, 1174
MluNI TGGCCA 1 cut(s) 911
MmeI TCCRAC 2 cut(s) 777, 1063
Mox20I TGGCCA 1 cut(s) 911
MroXI GAANNNNTTC 1 cut(s) 627
MscI TGGCCA 1 cut(s) 911
MseI TTAA 5 cut(s) 432, 512, 527, 888, 1193
MslI CAYNNNNRTG 2 cut(s) 332, 637
Msp20I TGGCCA 1 cut(s) 911
MspA1I CMGCKG 2 cut(s) 115, 1006
MspCI CTTAAG 1 cut(s) 887
MspI CCGG 1 cut(s) 229
MspR9I CCNGG 2 cut(s) 563, 981
Mva1269I GAATGC 2 cut(s) 158, 469
MvaI CCWGG 2 cut(s) 563, 981
MvnI CGCG 1 cut(s) 259
MwoI GCNNNNNNNGC 1 cut(s) 833
NdeII GATC 3 cut(s) 33, 754, 814
NheI GCTAGC 1 cut(s) 1109
NlaIII CATG 8 cut(s) 337, 642, 682, 701, 769, 1042, 1049, 1164
NlaIV GGNNCC 3 cut(s) 294, 382, 644
NmuCI GTSAC 1 cut(s) 845
NspI RCATGY 2 cut(s) 1042, 1049
NspV TTCGAA 1 cut(s) 1125
PciI ACATGT 1 cut(s) 1045
PctI GAATGC 2 cut(s) 158, 469
PdmI GAANNNNTTC 1 cut(s) 627
PfeI GAWTC 5 cut(s) 68, 623, 1086, 1094, 1186
PflFI GACNNNGTC 1 cut(s) 163
PkrI GCNGC 7 cut(s) 219, 415, 469, 488, 719, 1002, 1005
PscI ACATGT 1 cut(s) 1045
Psp124BI GAGCTC 1 cut(s) 926
Psp6I CCWGG 2 cut(s) 561, 979
PspGI CCWGG 2 cut(s) 561, 979
PspN4I GGNNCC 3 cut(s) 294, 382, 644
PsrI GAACNNNNNNTAC 2 cut(s) 487, 519
PstI CTGCAG 3 cut(s) 472, 859, 1005
PstNI CAGNNNCTG 1 cut(s) 863
PsyI GACNNNGTC 1 cut(s) 163
PvuII CAGCTG 2 cut(s) 115, 1006
RsaI GTAC 3 cut(s) 208, 382, 1050
RsaNI GTAC 3 cut(s) 207, 381, 1049
RseI CAYNNNNRTG 2 cut(s) 332, 637
SacI GAGCTC 1 cut(s) 926
SaqAI TTAA 5 cut(s) 432, 512, 527, 888, 1193
SatI GCNGC 7 cut(s) 218, 414, 468, 487, 718, 1001, 1004
Sau3AI GATC 3 cut(s) 33, 754, 814
SbfI CCTGCAGG 1 cut(s) 859
ScrFI CCNGG 2 cut(s) 563, 981
SdaI CCTGCAGG 1 cut(s) 859
SduI GDGCHC 2 cut(s) 926, 1145
SfaNI GCATC 3 cut(s) 229, 298, 942
SfcI CTRYAG 4 cut(s) 105, 468, 855, 1001
SfuI TTCGAA 1 cut(s) 1125
SmiMI CAYNNNNRTG 2 cut(s) 332, 637
SmlI CTYRAG 2 cut(s) 86, 887
SmoI CTYRAG 2 cut(s) 86, 887
SpeI ACTAGT 1 cut(s) 134
Sse8387I CCTGCAGG 1 cut(s) 859
Sse9I AATT 6 cut(s) 567, 672, 705, 722, 1132, 1174
SsiI CCGC 4 cut(s) 259, 419, 520, 715
SspI AATATT 1 cut(s) 64
SspMI CTAG 5 cut(s) 135, 318, 828, 842, 1110
SstI GAGCTC 1 cut(s) 926
StyD4I CCNGG 2 cut(s) 561, 979
TaaI ACNGT 1 cut(s) 865
TaqI TCGA 4 cut(s) 40, 618, 1125, 1184
TasI AATT 6 cut(s) 567, 672, 705, 722, 1132, 1174
TatI WGTACW 2 cut(s) 206, 1048
TfiI GAWTC 5 cut(s) 68, 623, 1086, 1094, 1186
Tru1I TTAA 5 cut(s) 432, 512, 527, 888, 1193
Tru9I TTAA 5 cut(s) 432, 512, 527, 888, 1193
TscAI CASTG 2 cut(s) 797, 868
TseFI GTSAC 1 cut(s) 845
TseI GCWGC 7 cut(s) 217, 413, 467, 486, 717, 1000, 1003
Tsp45I GTSAC 1 cut(s) 845
TspDTI ATGAA 2 cut(s) 387, 636
TspRI CASTG 2 cut(s) 797, 868
Tth111I GACNNNGTC 1 cut(s) 163
Vha464I CTTAAG 1 cut(s) 887
XapI RAATTY 1 cut(s) 1174
XceI RCATGY 2 cut(s) 1042, 1049
XmnI GAANNNNTTC 1 cut(s) 627
XspI CTAG 5 cut(s) 135, 318, 828, 842, 1110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.