pycom15g19780
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
14180549 .. 14180833
285 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g19780.1

Sequence Viewer

Length: 285 bp
ATGATGCCGGGGACACCAGCAACACCGTCTACTAAGGTGCGGAGGACCCCGTGCTCCACTCCGGGCGGTTCTAAAGTCAGTGAGGAGAAAATTTTAGTTACAGTTCGTTTGAGGCCACTAAACCGCAGAGAGCAGGCGTTGTATGATCTTATAGCTTGGGACTGCTTGGATGAGCACACTATCGTATTCAAGAATCCGAATCATGAGCGGCCCTCAAACCCCTACACCTTTGGTATGTATTATATGAAAACCCCTACACCGTTGTCTTGTTGTGTTCAGTGCTGA

Protein Analysis

95

Amino Acids

10.67

Weight (kDa)

8.93

Isoelectric Point (pI)

54.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 208
AccI GTMKAC 1 cut(s) 29
AciI CCGC 4 cut(s) 40, 66, 124, 208
AcsI RAATTY 1 cut(s) 90
AgsI TTSAA 1 cut(s) 190
AluBI AGCT 1 cut(s) 155
AluI AGCT 1 cut(s) 155
Alw21I GWGCWC 2 cut(s) 56, 177
AoxI GGCC 2 cut(s) 113, 209
ApoI RAATTY 1 cut(s) 90
AspS9I GGNCC 2 cut(s) 45, 210
AsuC2I CCSGG 2 cut(s) 9, 63
AvaII GGWCC 1 cut(s) 45
Bbv12I GWGCWC 2 cut(s) 56, 177
BcnI CCSGG 2 cut(s) 9, 63
BisI GCNGC 1 cut(s) 209
BlsI GCNGC 1 cut(s) 210
Bme1390I CCNGG 2 cut(s) 9, 63
Bme18I GGWCC 1 cut(s) 45
BmgT120I GGNCC 2 cut(s) 45, 210
BmiI GGNNCC 1 cut(s) 47
BmrFI CCNGG 2 cut(s) 9, 63
BplI GAGNNNNNCTC 2 cut(s) 197, 229
BpuMI CCSGG 2 cut(s) 9, 63
BsaJI CCNNGG 1 cut(s) 8
BseDI CCNNGG 1 cut(s) 8
BseGI GGATG 1 cut(s) 175
BseRI GAGGAG 1 cut(s) 98
BshFI GGCC 2 cut(s) 115, 211
BsiHKAI GWGCWC 2 cut(s) 56, 177
BsiSI CCGG 2 cut(s) 8, 62
BslFI GGGAC 2 cut(s) 25, 173
BsmFI GGGAC 2 cut(s) 25, 173
BsnI GGCC 2 cut(s) 115, 211
Bsp1286I GDGCHC 2 cut(s) 56, 177
Bsp143I GATC 1 cut(s) 145
BspACI CCGC 4 cut(s) 40, 66, 124, 208
BspANI GGCC 2 cut(s) 115, 211
BspHI TCATGA 1 cut(s) 202
BspLI GGNNCC 1 cut(s) 47
BsrBI CCGCTC 1 cut(s) 208
BssECI CCNNGG 1 cut(s) 8
BssMI GATC 1 cut(s) 145
Bst4CI ACNGT 3 cut(s) 27, 103, 261
BstC8I GCNNGC 1 cut(s) 135
BstDEI CTNAG 1 cut(s) 33
BstF5I GGATG 1 cut(s) 175
BstKTI GATC 1 cut(s) 148
BstMBI GATC 1 cut(s) 145
BstSCI CCNGG 2 cut(s) 7, 61
BsuRI GGCC 2 cut(s) 115, 211
BtsCI GGATG 1 cut(s) 175
BtsIMutI CAGTG 2 cut(s) 85, 284
Cac8I GCNNGC 1 cut(s) 135
CciI TCATGA 1 cut(s) 202
Cfr13I GGNCC 2 cut(s) 45, 210
CviAII CATG 1 cut(s) 203
CviJI RGCY 3 cut(s) 115, 155, 211
CviKI_1 RGCY 3 cut(s) 115, 155, 211
DdeI CTNAG 1 cut(s) 33
DpnI GATC 1 cut(s) 147
DpnII GATC 1 cut(s) 145
Eco47I GGWCC 1 cut(s) 45
EcoO109I RGGNCCY 1 cut(s) 45
FaeI CATG 1 cut(s) 206
FaiI YATR 6 cut(s) 144, 152, 204, 236, 243, 245
FaqI GGGAC 2 cut(s) 25, 173
FatI CATG 1 cut(s) 202
FblI GTMKAC 1 cut(s) 29
Fnu4HI GCNGC 1 cut(s) 209
FokI GGATG 1 cut(s) 182
Fsp4HI GCNGC 1 cut(s) 209
GluI GCNGC 1 cut(s) 209
HaeIII GGCC 2 cut(s) 115, 211
HapII CCGG 2 cut(s) 8, 62
Hin1II CATG 1 cut(s) 206
HinfI GANTC 2 cut(s) 193, 199
HpaII CCGG 2 cut(s) 8, 62
Hpy166II GTNNAC 1 cut(s) 30
Hpy188I TCNGA 1 cut(s) 198
Hpy188III TCNNGA 2 cut(s) 190, 203
Hpy8I GTNNAC 1 cut(s) 30
HpyCH4III ACNGT 3 cut(s) 27, 103, 261
HpyF3I CTNAG 1 cut(s) 33
Hsp92II CATG 1 cut(s) 206
Kzo9I GATC 1 cut(s) 145
LmnI GCTCC 1 cut(s) 59
LpnPI CCDG 4 cut(s) 21, 30, 75, 119
MaeIII GTNAC 1 cut(s) 97
MalI GATC 1 cut(s) 147
MbiI CCGCTC 1 cut(s) 208
MboI GATC 1 cut(s) 145
MhlI GDGCHC 2 cut(s) 56, 177
MluCI AATT 1 cut(s) 90
MnlI CCTC 4 cut(s) 36, 76, 105, 223
MspI CCGG 2 cut(s) 8, 62
MspR9I CCNGG 2 cut(s) 9, 63
NciI CCSGG 2 cut(s) 9, 63
NdeII GATC 1 cut(s) 145
NlaIII CATG 1 cut(s) 206
NlaIV GGNNCC 1 cut(s) 47
PagI TCATGA 1 cut(s) 202
PfeI GAWTC 2 cut(s) 193, 199
PkrI GCNGC 1 cut(s) 210
PpuMI RGGWCCY 1 cut(s) 45
Psp5II RGGWCCY 1 cut(s) 45
PspN4I GGNNCC 1 cut(s) 47
PspPI GGNCC 2 cut(s) 45, 210
PspPPI RGGWCCY 1 cut(s) 45
SatI GCNGC 1 cut(s) 209
Sau3AI GATC 1 cut(s) 145
Sau96I GGNCC 2 cut(s) 45, 210
ScrFI CCNGG 2 cut(s) 9, 63
SduI GDGCHC 2 cut(s) 56, 177
SetI ASST 3 cut(s) 39, 157, 230
SinI GGWCC 1 cut(s) 45
Sse9I AATT 1 cut(s) 90
SsiI CCGC 4 cut(s) 40, 66, 124, 208
StyD4I CCNGG 2 cut(s) 7, 61
TaaI ACNGT 3 cut(s) 27, 103, 261
TasI AATT 1 cut(s) 90
TauI GCSGC 1 cut(s) 211
TfiI GAWTC 2 cut(s) 193, 199
TscAI CASTG 2 cut(s) 85, 284
TspDTI ATGAA 1 cut(s) 260
TspRI CASTG 2 cut(s) 85, 284
VpaK11BI GGWCC 1 cut(s) 45
XapI RAATTY 1 cut(s) 90
XmiI GTMKAC 1 cut(s) 29
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.