Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0003759

Physical Location & Seq

Genomic Coordinates Forward (+)

31696031 .. 31719690

Gene Structure 23660 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1313400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2712 bp

ATGGCGGAGCAGAGGAACAACAACAACAGGTGGAACTGGGAGGTCAGTGGCTTCGAGCCAAGTAAGTTGCCTTCTTCGTCGACGTCGGCTGCGGTTGCGGCGTCCAGCTTCGACCACCACCACGACAATTACAAGCCCGGTGCGCCGTTAGTTCGGCGGTACTCGATCTCGGCTGCGTCGGCTTTGGCTCAGTCTGAGCTCGCCAACTCCAACTCCAACAACCAGGCTGTGGCTTCCAAGCTCCAGAAGCTCAAGGATAAAGTTAAGCTTGCTAGAGAAGATTACTTGGAGTTGAGACAAGAAGCAAGTGAGCTTCACGAGTACTCGAATGCGAAACTTGAACGAGCTACACGTTATCTTGGTGTTCTTGCGAATAAAAGCCGAAAACTAGACCAGTTTGCCCTTGAAACCGAGGCTAGAATTTCTCCGCTGATCAATGAGAAGAGAAGGTTGTTCAATGACTTATTGACAGCCAAAGTTTATGGACCTCATGTTGGACAGGCTGAACTTTTCCATGATGTTCAACCATTGGTGCAATCAGCATTGGGTGGATATAACGTTTCCATATTTGCATATGGACAAACCAACTCTGGAAAGACACACACTATGGAAGGATCTAGCCATGATCGCGGTTTATTTGCTCGATCTTTCGAGGAACTATTTGATTTATCCAACTCTGATTCCACTTCTACTTCAAGATTTAAATTCTCTGTTACAGTTTTTGAGCTCTACAACGAACAGATAAGGGATTTACTTTCAGAATCAGGAGATGCTCTACCAAAGATTCGCATGGGATCACCAGAATCCTTTGTAGAACTTGTGCAGGAAAAAGTTGATAACCCACTGGACTTCTCTAAAGTATTAAAAGCTGCATTTCAGAGCCGAGGAAATAAGCCATCAAAGTTCAATGATTCTCATTTGATCATCAGGATACATATATATTATAACAATTTGATCACTGGAGAAAATACATACAGCAAGCTCTCTCTAGTTGACTTGGCTGGAAGTGAAGGATTAATTGTCGAAGATGAGAGTAGTGAGTGTGTGACGGACTTGCTGCATGTTATGAAATCACTTTCAGCGTATGTTGCCTATAATTTAAAGGATGGTTCACATTGGTTTTGTTGGGAGATGTCTTGTATACCTTATGAAATTTCAATGCTTACCAAAGTACTAGCAGACTCACTAGGTGGAAGTTCAAAAACTCTGATGATTGTTAATGTCGTTCCAAATTCCTTGAATTTGTCGAAGACATTATCATCTCTCAATTTCTCTTCTAGAGCTCGAAATGCTGTTCTAAGCCTTGGGAATCGAGATACGATAAAGAAATGGAGAGATATCGCAAATGATGCACGTAAGGAGTTGTATGAAAAGGAAAAAGAAAGTCAAGACCTGAAACAAGAGATTTTGGGACTTAAAAATATACTCAAGGATGCAAATGATCAGTGTGTCTTGCTCTTCAATGAAGTGCAGAAGTCAGAGAATATAATGCTTGCAGATAAGCAAAAGATAGAAAAGGAGCAAAATGCACAGCTTAGAAATCAAGTAGCTCAACTGTTACAATTAGAACAAGATCAGAAAGTGCAGATAGAACAACGAGATTCTACAATCCAGGCCTTGCAGGCCAAAATTAAAAGCATCGAGTCCAAACTCAGTGAAGCCCTCCATTCCAGTGAAGATCAGTCACCATTAGTCTTGGATCCAGGGTCTGCAATTCTATCAAATTCCAAGGCAATGGGAGATGGCATGGATTCTCCAGTAACTACGAATTTGGAAGAGGAGCTTAAAAAGCGTGATGCATTAATTGAGAGGTTGCATGAAGAAAATGAAAAGTTATTTGATAGATTGACAGAGAAAACATCTTTGGCTGGCTCACCAAAGTTGTCAAGTCCATTATCCAAAGGGTGGCTAAATGTTCAGTCTCGGGACCTTGTGAGGAATGATAGTAGAGGACACTCGATGGATATTGTTTCTTCATCAATCGCACTTGCTGCAGATGAGACTGAGGGTACTGTTGCTTTGGTGAAATCTAGTGTGGAGCAAGTCAAGACAACCCCGGCTGGAGAATATCTTACGTCTGCCTTGAATGACTTTGATCCTGAGCAGCATGACAGCCTTGCTGCGATTTCGGATGGAGCAAATAAGCTTTTAATGCTGGTTCTGGCTGCAGTCATTAAAGCAGGGGCTTCTAGGGAGCATGAAATACTTGCTGAAATAGGAGATGCCGTTTTCTCTTTTATTCGTAAAATGGAACCACAGAGGGCAATGGACACCATGCTTGTATCCCGTGTTAGAATTTTATATATTAGATCCTTGCTTGCTAGATCACCAGAGCTGCAGTCCATCAAGGTTTCTCCGGTCGAGAGTTTTCTAGAGAAGGTTAGTACTGGACGTAGTAGGAGTTCCAGCCGGGGAAACAGCCCAGGAAGATCTCCTGTGCTCTATGTTGATGAGCATATCCAAGGCTTCAAAGTGAATCTAAAGCCAGAAAAGAAGTCCAAGTTTTCATCAGTTGTATCAAAGATACGCGGACTTGATCAGGAGACTCCAAGGCAGCAGGTAACCGCTGGAAAGCTTAAGGAAATAAATGAGGAAGCAAAAAGTTTTGCAATTGCAAACAAAGCGCTTGCTGCTCTGTTTGTTCATACACCAGCTGGTGAGCTCCAGCGCCAACTTAGATCCTGGCTTGCAGAAAATTTCGATTCTCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000278 GO:0000281 GO:0000910 GO:0000911 GO:0000913 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005819 GO:0005829 GO:0005856 GO:0005871 GO:0005875 GO:0005886 GO:0006810 GO:0006928 GO:0006996 GO:0007017 GO:0007018 GO:0007049 GO:0007097 GO:0008017 GO:0008092 GO:0008150 GO:0009504 GO:0009507 GO:0009524 GO:0009526 GO:0009536 GO:0009657 GO:0009658 GO:0009902 GO:0009903 GO:0009904 GO:0009941 GO:0009987 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019750 GO:0022402 GO:0022607 GO:0030029 GO:0030048 GO:0030705 GO:0031022 GO:0031967 GO:0031975 GO:0032506 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0051179 GO:0051234 GO:0051301 GO:0051640 GO:0051641 GO:0051644 GO:0051647 GO:0051649 GO:0051656 GO:0051667 GO:0061640 GO:0071840 GO:0071944 GO:0099515 GO:1902410 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

904

Amino Acids

100.46

Weight (kDa)

6.32

Isoelectric Point (pI)

48.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	158 - 252	8.3e-23	Microtubule binding
Kinesin	PF00225	159 - 430	2.2e-68	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003759)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10470 AT5G10470 AT5G65460 AT5G65460 AT5G65460 AT5G65460 AT5G65460 AT5G65460
fragaria_vesca	FvH4_1g19720 FvH4_1g19720
malus_domestica	MD00G1019700.v1.1 MD15G1313400.v1.1 MD15G1313600.v1.1
prunus_persica	Prupe.6G198800_v2.0.a1 Prupe.6G198800_v2.0.a1
pyrus_communis	pycom01g06640 pycom15g27690
rosa_chinensis	RchiOBHm_Chr2g0111301
rosa_laevigata	RLG00000007010 RLG00000017883
rosa_multiflora	Rmu_co8453119.1_g000001 Rmu_sc0001363.1_g000009 Rmu_sc0001363.1_g000010 Rmu_sc0036570.1_g000001 Rmu_sc0036571.1_g000001
rosa_roxburghii	Rroxscaffold_2G00132520
rosa_rugosa	Rorug02G0172700
rosa_samantha	Rh2AG225700 Rh2BG237400 Rh2CG228700 Rh2DG233200 Rh4DG010800 Rh5BG175600
rosa_wichuraiana	Rw2G017420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	945
AatII	GACGTC	1 cut(s)	86
Acc36I	ACCTGC	1 cut(s)	2548
AccB7I	CCANNNNNTGG	2 cut(s)	229, 1905
AccI	GTMKAC	2 cut(s)	80, 1141
AccII	CGCG	2 cut(s)	630, 2529
AciI	CCGC	8 cut(s)	5, 92, 98, 157, 428, 630, 2529, 2565
AclI	AACGTT	1 cut(s)	558
AclWI	GGATC	7 cut(s)	622, 802, 1694, 1707, 2090, 2304, 2673
AcsI	RAATTY	9 cut(s)	420, 704, 1152, 1231, 1240, 1723, 1768, 2295, 2695
AcyI	GRCGYC	2 cut(s)	83, 101
AdeI	CACNNNGTG	1 cut(s)	1190
AfaI	GTAC	5 cut(s)	161, 323, 1173, 2011, 2386
AfeI	AGCGCT	1 cut(s)	2625
AfiI	CCNNNNNNNGG	3 cut(s)	229, 494, 1905
AflII	CTTAAG	1 cut(s)	2576
AflIII	ACRYGT	1 cut(s)	350
AjnI	CCWGG	5 cut(s)	222, 1611, 1702, 2422, 2681
AjuI	GAANNNNNNNTTGG	2 cut(s)	1847, 1879
Alw21I	GWGCWC	5 cut(s)	201, 729, 1285, 2442, 2664
Alw26I	GTCTC	4 cut(s)	289, 1926, 1994, 2537
AlwI	GGATC	7 cut(s)	622, 802, 1694, 1707, 2090, 2304, 2673
AlwNI	CAGNNNCTG	1 cut(s)	1709
Ama87I	CYCGRG	1 cut(s)	1923
Aor51HI	AGCGCT	1 cut(s)	2625
AoxI	GGCC	2 cut(s)	1614, 1623
ApoI	RAATTY	9 cut(s)	420, 704, 1152, 1231, 1240, 1723, 1768, 2295, 2695
AseI	ATTAAT	2 cut(s)	1016, 1802
AspLEI	GCGC	3 cut(s)	145, 2626, 2670
AspS9I	GGNCC	2 cut(s)	485, 1927
AsuC2I	CCSGG	3 cut(s)	138, 2057, 2411
AsuHPI	GGTGA	6 cut(s)	789, 1677, 1866, 2035, 2319, 2669
AvaI	CYCGRG	1 cut(s)	1923
AvaII	GGWCC	2 cut(s)	485, 1927
BamHI	GGATCC	1 cut(s)	1699
BanII	GRGCYC	4 cut(s)	201, 729, 1285, 2664
BarI	GAAGNNNNNNTAC	2 cut(s)	55, 87
BauI	CACGAG	1 cut(s)	317
BbsI	GAAGAC	1 cut(s)	1256
Bbv12I	GWGCWC	5 cut(s)	201, 729, 1285, 2442, 2664
BccI	CCATC	6 cut(s)	904, 1100, 1736, 1954, 2126, 2351
BceAI	ACGGC	2 cut(s)	130, 2210
BciT130I	CCWGG	5 cut(s)	224, 1613, 1704, 2424, 2683
BciVI	GTATCC	2 cut(s)	924, 2293
BclI	TGATCA	5 cut(s)	432, 921, 954, 1441, 2536
BcnI	CCSGG	3 cut(s)	138, 2057, 2411
BcoDI	GTCTC	4 cut(s)	289, 1926, 1994, 2537
BfmI	CTRYAG	3 cut(s)	1992, 2166, 2336
BfoI	RGCGCY	2 cut(s)	2627, 2671
BfrI	CTTAAG	1 cut(s)	2576
BfuAI	ACCTGC	1 cut(s)	2548
BfuI	GTATCC	2 cut(s)	924, 2293
BglI	GCCNNNNNGGC	1 cut(s)	1622
BglII	AGATCT	1 cut(s)	2429
BmcAI	AGTACT	3 cut(s)	323, 1173, 2386
Bme1390I	CCNGG	8 cut(s)	138, 224, 1613, 1704, 2057, 2411, 2424, 2683
Bme18I	GGWCC	2 cut(s)	485, 1927
BmeT110I	CYCGRG	1 cut(s)	1923
BmgT120I	GGNCC	2 cut(s)	485, 1927
BmiI	GGNNCC	3 cut(s)	1701, 1928, 2253
BmrFI	CCNGG	8 cut(s)	138, 224, 1613, 1704, 2057, 2411, 2424, 2683
BmrI	ACTGGG	1 cut(s)	46
BmsI	GCATC	6 cut(s)	760, 1339, 1423, 1647, 1786, 2212
BmuI	ACTGGG	1 cut(s)	46
BpiI	GAAGAC	1 cut(s)	1256
BpmI	CTGGAG	5 cut(s)	227, 981, 1740, 2082, 2648
Bpu10I	CCTNAGC	1 cut(s)	2100
BpuEI	CTTGAG	2 cut(s)	236, 1412
BpuMI	CCSGG	3 cut(s)	138, 2057, 2411
BsaAI	YACGTR	1 cut(s)	1355
BsaHI	GRCGYC	2 cut(s)	83, 101
BsaWI	WCCGGW	1 cut(s)	2356
BsaXI	ACNNNNNCTCC	4 cut(s)	197, 227, 2211, 2241
Bsc4I	CCNNNNNNNGG	3 cut(s)	229, 494, 1905
Bse1I	ACTGG	7 cut(s)	41, 394, 849, 964, 1671, 1757, 2392
Bse3DI	GCAATG	2 cut(s)	1740, 2271
BseBI	CCWGG	5 cut(s)	224, 1613, 1704, 2424, 2683
BseGI	GGATG	3 cut(s)	1111, 1438, 2137
BseLI	CCNNNNNNNGG	3 cut(s)	229, 494, 1905
BseMI	GCAATG	2 cut(s)	1740, 2271
BseMII	CTCAG	5 cut(s)	186, 203, 1666, 1995, 2091
BseNI	ACTGG	7 cut(s)	41, 394, 849, 964, 1671, 1757, 2392
BseRI	GAGGAG	1 cut(s)	1793
BsgI	GTGCAG	3 cut(s)	842, 1490, 1604
Bsh1236I	CGCG	2 cut(s)	630, 2529
Bsh1285I	CGRYCG	1 cut(s)	2361
BshFI	GGCC	2 cut(s)	1616, 1625
BsiEI	CGRYCG	1 cut(s)	2361
BsiHKAI	GWGCWC	5 cut(s)	201, 729, 1285, 2442, 2664
BsiHKCI	CYCGRG	1 cut(s)	1923
BsiSI	CCGG	4 cut(s)	138, 2057, 2357, 2410
BslFI	GGGAC	2 cut(s)	1425, 1940
BslI	CCNNNNNNNGG	3 cut(s)	229, 494, 1905
BsmAI	GTCTC	4 cut(s)	289, 1926, 1994, 2537
BsmFI	GGGAC	2 cut(s)	1425, 1940
BsmI	GAATGC	1 cut(s)	334
BsnI	GGCC	2 cut(s)	1616, 1625
BsoBI	CYCGRG	1 cut(s)	1923
Bsp1286I	GDGCHC	5 cut(s)	201, 729, 1285, 2442, 2664
BspACI	CCGC	8 cut(s)	5, 92, 98, 157, 428, 630, 2529, 2565
BspANI	GGCC	2 cut(s)	1616, 1625
BspCNI	CTCAG	5 cut(s)	187, 202, 1665, 1996, 2092
BspFNI	CGCG	2 cut(s)	630, 2529
BspLI	GGNNCC	3 cut(s)	1701, 1928, 2253
BspMAI	CTGCAG	3 cut(s)	1996, 2170, 2340
BspMI	ACCTGC	1 cut(s)	2548
BspPI	GGATC	7 cut(s)	622, 802, 1694, 1707, 2090, 2304, 2673
BspQI	GCTCTTC	1 cut(s)	1463
BspTI	CTTAAG	1 cut(s)	2576
BsrDI	GCAATG	2 cut(s)	1740, 2271
BsrI	ACTGG	7 cut(s)	41, 394, 849, 964, 1671, 1757, 2392
BssNAI	GTATAC	1 cut(s)	1142
BssNI	GRCGYC	2 cut(s)	83, 101
BssSI	CACGAG	1 cut(s)	317
BssT1I	CCWWGG	4 cut(s)	1303, 1728, 2461, 2549
Bst1107I	GTATAC	1 cut(s)	1142
Bst2BI	CACGAG	1 cut(s)	317
Bst2UI	CCWGG	5 cut(s)	224, 1613, 1704, 2424, 2683
Bst4CI	ACNGT	3 cut(s)	718, 1557, 2014
Bst6I	CTCTTC	4 cut(s)	437, 1279, 1463, 1770
BstACI	GRCGYC	2 cut(s)	83, 101
BstAFI	CTTAAG	1 cut(s)	2576
BstAPI	GCANNNNNTGC	2 cut(s)	1349, 1991
BstBAI	YACGTR	1 cut(s)	1355
BstC8I	GCNNGC	9 cut(s)	201, 270, 980, 1494, 1623, 1870, 2319, 2628, 2688
BstDEI	CTNAG	8 cut(s)	189, 195, 1298, 1535, 1652, 2004, 2100, 2675
BstEII	GGTNACC	1 cut(s)	2560
BstF5I	GGATG	3 cut(s)	1111, 1438, 2137
BstFNI	CGCG	2 cut(s)	630, 2529
BstH2I	RGCGCY	2 cut(s)	2627, 2671
BstHHI	GCGC	3 cut(s)	145, 2626, 2670
BstMAI	GTCTC	4 cut(s)	289, 1926, 1994, 2537
BstMCI	CGRYCG	1 cut(s)	2361
BstNI	CCWGG	5 cut(s)	224, 1613, 1704, 2424, 2683
BstNSI	RCATGY	1 cut(s)	1064
BstPI	GGTNACC	1 cut(s)	2560
BstSCI	CCNGG	8 cut(s)	136, 222, 1611, 1702, 2055, 2409, 2422, 2681
BstSFI	CTRYAG	3 cut(s)	1992, 2166, 2336
BstUI	CGCG	2 cut(s)	630, 2529
BstV2I	GAAGAC	1 cut(s)	1256
BstX2I	RGATCY	5 cut(s)	614, 1699, 2309, 2429, 2678
BstXI	CCANNNNNNTGG	1 cut(s)	1735
BstYI	RGATCY	5 cut(s)	614, 1699, 2309, 2429, 2678
BstZ17I	GTATAC	1 cut(s)	1142
BsuI	GTATCC	2 cut(s)	924, 2293
BsuRI	GGCC	2 cut(s)	1616, 1625
BtsCI	GGATG	3 cut(s)	1111, 1438, 2137
BtsIMutI	CAGTG	6 cut(s)	52, 842, 957, 1451, 1660, 1678
BveI	ACCTGC	1 cut(s)	2548
Cac8I	GCNNGC	9 cut(s)	201, 270, 980, 1494, 1623, 1870, 2319, 2628, 2688
CaiI	CAGNNNCTG	1 cut(s)	1709
CfoI	GCGC	3 cut(s)	145, 2626, 2670
Cfr13I	GGNCC	2 cut(s)	485, 1927
CseI	GACGC	2 cut(s)	90, 165
Csp6I	GTAC	5 cut(s)	160, 322, 1172, 2010, 2385
CviQI	GTAC	5 cut(s)	160, 322, 1172, 2010, 2385
DdeI	CTNAG	8 cut(s)	189, 195, 1298, 1535, 1652, 2004, 2100, 2675
DraI	TTTAAA	2 cut(s)	703, 1101
DraIII	CACNNNGTG	1 cut(s)	1190
Eam1104I	CTCTTC	4 cut(s)	437, 1279, 1463, 1770
EarI	CTCTTC	4 cut(s)	437, 1279, 1463, 1770
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	4 cut(s)	199, 727, 1283, 2662
Eco130I	CCWWGG	4 cut(s)	1303, 1728, 2461, 2549
Eco147I	AGGCCT	1 cut(s)	1616
Eco24I	GRGCYC	4 cut(s)	201, 729, 1285, 2664
Eco32I	GATATC	1 cut(s)	1339
Eco47I	GGWCC	2 cut(s)	485, 1927
Eco47III	AGCGCT	1 cut(s)	2625
Eco53kI	GAGCTC	4 cut(s)	199, 727, 1283, 2662
Eco88I	CYCGRG	1 cut(s)	1923
Eco91I	GGTNACC	1 cut(s)	2560
EcoICRI	GAGCTC	4 cut(s)	199, 727, 1283, 2662
EcoO109I	RGGNCCY	1 cut(s)	1927
EcoO65I	GGTNACC	1 cut(s)	2560
EcoRII	CCWGG	5 cut(s)	222, 1611, 1702, 2422, 2681
EcoRV	GATATC	1 cut(s)	1339
EcoT14I	CCWWGG	4 cut(s)	1303, 1728, 2461, 2549
EcoT22I	ATGCAT	1 cut(s)	1801
EcoT38I	GRGCYC	4 cut(s)	201, 729, 1285, 2664
ErhI	CCWWGG	4 cut(s)	1303, 1728, 2461, 2549
FalI	AAGNNNNNCTT	4 cut(s)	252, 284, 1767, 1799
FaqI	GGGAC	2 cut(s)	1425, 1940
FauNDI	CATATG	1 cut(s)	574
FbaI	TGATCA	5 cut(s)	432, 921, 954, 1441, 2536
FblI	GTMKAC	2 cut(s)	80, 1141
FokI	GGATG	3 cut(s)	1118, 1445, 2144
FriOI	GRGCYC	4 cut(s)	201, 729, 1285, 2664
GlaI	GCGC	3 cut(s)	144, 2625, 2669
GsuI	CTGGAG	5 cut(s)	227, 981, 1740, 2082, 2648
HaeII	RGCGCY	2 cut(s)	2627, 2671
HaeIII	GGCC	2 cut(s)	1616, 1625
HapII	CCGG	4 cut(s)	138, 2057, 2357, 2410
HgaI	GACGC	2 cut(s)	90, 165
HhaI	GCGC	3 cut(s)	145, 2626, 2670
Hin1I	GRCGYC	2 cut(s)	83, 101
Hin6I	GCGC	3 cut(s)	143, 2624, 2668
HinP1I	GCGC	3 cut(s)	143, 2624, 2668
HincII	GTYRAC	2 cut(s)	81, 994
HindII	GTYRAC	2 cut(s)	81, 994
HindIII	AAGCTT	3 cut(s)	266, 2144, 2573
HpaII	CCGG	4 cut(s)	138, 2057, 2357, 2410
HphI	GGTGA	6 cut(s)	789, 1677, 1866, 2035, 2319, 2669
Hpy166II	GTNNAC	4 cut(s)	81, 994, 1112, 1142
Hpy188I	TCNGA	8 cut(s)	196, 679, 760, 879, 1209, 1480, 1578, 2131
Hpy8I	GTNNAC	4 cut(s)	81, 994, 1112, 1142
Hpy99I	CGWCG	4 cut(s)	82, 85, 88, 181
HpyAV	CCTTC	5 cut(s)	81, 441, 605, 1004, 2371
HpyCH4III	ACNGT	3 cut(s)	718, 1557, 2014
HpyCH4IV	ACGT	6 cut(s)	83, 352, 558, 1354, 2075, 2392
HpyF3I	CTNAG	8 cut(s)	189, 195, 1298, 1535, 1652, 2004, 2100, 2675
HpySE526I	ACGT	6 cut(s)	83, 352, 558, 1354, 2075, 2392
Hsp92I	GRCGYC	2 cut(s)	83, 101
HspAI	GCGC	3 cut(s)	143, 2624, 2668
Ksp22I	TGATCA	5 cut(s)	432, 921, 954, 1441, 2536
LguI	GCTCTTC	1 cut(s)	1463
LmnI	GCTCC	8 cut(s)	7, 246, 1519, 1780, 2038, 2135, 2194, 2667
LweI	GCATC	6 cut(s)	760, 1339, 1423, 1647, 1786, 2212
MaeII	ACGT	6 cut(s)	83, 352, 558, 1354, 2075, 2392
MaeIII	GTNAC	6 cut(s)	712, 1045, 1557, 1683, 1759, 2560
MfeI	CAATTG	1 cut(s)	2610
MflI	RGATCY	5 cut(s)	614, 1699, 2309, 2429, 2678
MhlI	GDGCHC	5 cut(s)	201, 729, 1285, 2442, 2664
MlyI	GAGTC	3 cut(s)	1175, 1652, 2539
MmeI	TCCRAC	4 cut(s)	234, 240, 475, 696
Mph1103I	ATGCAT	1 cut(s)	1801
MslI	CAYNNNNRTG	1 cut(s)	1671
MspA1I	CMGCKG	3 cut(s)	430, 2567, 2654
MspCI	CTTAAG	1 cut(s)	2576
MspI	CCGG	4 cut(s)	138, 2057, 2357, 2410
MspR9I	CCNGG	8 cut(s)	138, 224, 1613, 1704, 2057, 2411, 2424, 2683
MunI	CAATTG	1 cut(s)	2610
Mva1269I	GAATGC	1 cut(s)	334
MvaI	CCWGG	5 cut(s)	224, 1613, 1704, 2424, 2683
MvnI	CGCG	2 cut(s)	630, 2529
NciI	CCSGG	3 cut(s)	138, 2057, 2411
NdeI	CATATG	1 cut(s)	574
NlaIV	GGNNCC	3 cut(s)	1701, 1928, 2253
NmeAIII	GCCGAG	2 cut(s)	149, 908
NmuCI	GTSAC	2 cut(s)	1045, 1683
NsiI	ATGCAT	1 cut(s)	1801
NspI	RCATGY	1 cut(s)	1064
PceI	AGGCCT	1 cut(s)	1616
PciSI	GCTCTTC	1 cut(s)	1463
PcsI	WCGNNNNNNNCGW	1 cut(s)	349
PctI	GAATGC	1 cut(s)	334
PflMI	CCANNNNNTGG	2 cut(s)	229, 1905
PleI	GAGTC	3 cut(s)	1175, 1651, 2539
PpsI	GAGTC	3 cut(s)	1175, 1651, 2539
Ppu21I	YACGTR	1 cut(s)	1355
PpuMI	RGGWCCY	1 cut(s)	1927
PshBI	ATTAAT	2 cut(s)	1016, 1802
PsiI	TTATAA	1 cut(s)	945
Psp124BI	GAGCTC	4 cut(s)	201, 729, 1285, 2664
Psp1406I	AACGTT	1 cut(s)	558
Psp5II	RGGWCCY	1 cut(s)	1927
Psp6I	CCWGG	5 cut(s)	222, 1611, 1702, 2422, 2681
PspEI	GGTNACC	1 cut(s)	2560
PspGI	CCWGG	5 cut(s)	222, 1611, 1702, 2422, 2681
PspN4I	GGNNCC	3 cut(s)	1701, 1928, 2253
PspPI	GGNCC	2 cut(s)	485, 1927
PspPPI	RGGWCCY	1 cut(s)	1927
PsrI	GAACNNNNNNTAC	2 cut(s)	2386, 2418
PstI	CTGCAG	3 cut(s)	1996, 2170, 2340
PstNI	CAGNNNCTG	1 cut(s)	1709
PsuI	RGATCY	5 cut(s)	614, 1699, 2309, 2429, 2678
PvuII	CAGCTG	1 cut(s)	2654
RsaI	GTAC	5 cut(s)	161, 323, 1173, 2011, 2386
RsaNI	GTAC	5 cut(s)	160, 322, 1172, 2010, 2385
RseI	CAYNNNNRTG	1 cut(s)	1671
SacI	GAGCTC	4 cut(s)	201, 729, 1285, 2664
SalI	GTCGAC	1 cut(s)	79
SapI	GCTCTTC	1 cut(s)	1463
Sau96I	GGNCC	2 cut(s)	485, 1927
ScaI	AGTACT	3 cut(s)	323, 1173, 2386
SchI	GAGTC	3 cut(s)	1175, 1652, 2539
ScrFI	CCNGG	8 cut(s)	138, 224, 1613, 1704, 2057, 2411, 2424, 2683
SduI	GDGCHC	5 cut(s)	201, 729, 1285, 2442, 2664
SfaNI	GCATC	6 cut(s)	760, 1339, 1423, 1647, 1786, 2212
SfcI	CTRYAG	3 cut(s)	1992, 2166, 2336
SfiI	GGCCNNNNNGGCC	1 cut(s)	1622
SgrDI	CGTCGACG	1 cut(s)	79
SinI	GGWCC	2 cut(s)	485, 1927
SmiI	ATTTAAAT	1 cut(s)	703
SmiMI	CAYNNNNRTG	1 cut(s)	1671
SmlI	CTYRAG	3 cut(s)	251, 1427, 2576
SmoI	CTYRAG	3 cut(s)	251, 1427, 2576
SseBI	AGGCCT	1 cut(s)	1616
SsiI	CCGC	8 cut(s)	5, 92, 98, 157, 428, 630, 2529, 2565
SstI	GAGCTC	4 cut(s)	201, 729, 1285, 2664
StuI	AGGCCT	1 cut(s)	1616
StyD4I	CCNGG	8 cut(s)	136, 222, 1611, 1702, 2055, 2409, 2422, 2681
StyI	CCWWGG	4 cut(s)	1303, 1728, 2461, 2549
SwaI	ATTTAAAT	1 cut(s)	703
TaaI	ACNGT	3 cut(s)	718, 1557, 2014
TaiI	ACGT	6 cut(s)	86, 355, 561, 1357, 2078, 2395
TatI	WGTACW	3 cut(s)	321, 1171, 2384
TauI	GCSGC	1 cut(s)	101
TscAI	CASTG	6 cut(s)	52, 849, 964, 1451, 1660, 1678
TseFI	GTSAC	2 cut(s)	1045, 1683
Tsp45I	GTSAC	2 cut(s)	1045, 1683
TspGWI	ACGGA	1 cut(s)	1064
TspRI	CASTG	6 cut(s)	52, 849, 964, 1451, 1660, 1678
Van91I	CCANNNNNTGG	2 cut(s)	229, 1905
Vha464I	CTTAAG	1 cut(s)	2576
VpaK11BI	GGWCC	2 cut(s)	485, 1927
VspI	ATTAAT	2 cut(s)	1016, 1802
XapI	RAATTY	9 cut(s)	420, 704, 1152, 1231, 1240, 1723, 1768, 2295, 2695
XbaI	TCTAGA	2 cut(s)	1277, 2371
XceI	RCATGY	1 cut(s)	1064
XmiI	GTMKAC	2 cut(s)	80, 1141
ZraI	GACGTC	1 cut(s)	84
ZrmI	AGTACT	3 cut(s)	323, 1173, 2386
Zsp2I	ATGCAT	1 cut(s)	1801

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.