Rroxscaffold_2G00132520
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
69505489 .. 69518450
12962 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00132520.1

Sequence Viewer

Length: 4143 bp
ATGGCGGAGCAGAGGAGCAACAAGTGGAACTGGGAGGTCAGTGGCTTCGAGCCGCGCAAGTGGACCAGTTCGTCGCCGACGGCGTCGACGGCGACGGCGAGCTTGGACAACAACGACGGCGGTTACAGGCCGGGGCGGAGGTACTCGATCTCGGCGGCGTCGGCGTTGGCTCAGTCCGAGCTTTCGAACCAGGCCGTGACGTCGAAGCTCCAGAAGCTCCAGGAGAATGTTAAGCTTGCTAAAGAAGATTACTTGGAGTTGAGGCAAGAAGCGAGTGAATTGAGTGAGTATTCGAATGCGAAACTTGAACGAGTTACTAGGTATCTTGGTGTTCTTGCTGCAAAGACCCGAAAGCTAGATCAATTTGCCCTTGAAACCGAGGCTAGAATTTCTCCGCTGATTAATGAGAAGAGAAGGTTGTTCAATGACTTATTGACAGCCAAAGGAAACATAAAAGTATATTGTCGTACACGACCATTATTCGAGGATGAAGGTTCTTCAGTTGTTGAGTATCCTGATGATTGCAATATCCGTGTCACTACTGGTGATGCTGCCTTGTCCAACCCCAAGAAGGAATTTGAACTTGACAGAGTTTATGGACCTCATGTTGGACAAGCCGAACTTTTCCGTGATGTTCAGCCATTGGTGCAATCAGCATTGGATGGATATAATGTTTCAATATATGCTTATGGGCAAACCAACTCAGGAAAGACGCACACTATGGAGGGATCTAGCCATGACCGTGGTTTATATGCTCGTTCGTTTGAGGAGCTATTTGATTTAGCCAATTCTGATTCAACTTCTACTTCTAGATTTAAGTTCTCTGTTACAGTTTTTGAGCTCTACAATGAACAGATAAGGGATTTACTCTTGGAATCAGGAGATGCTTTGCCAAAGATTCGCATGGGATCTCCAGACTTCTTTGTAGAACTTGTCCAGGAAAAAGTTGATAACCCACTGGACTTCTCTAAAGTATTGAAAGCTGCATTTCAGAGACGAGGAAATGATCCCTCAAAGTTCAATGTTTCTCATTTGATCATCACGATACATATATACTATAATAATTTGATCACTGGGGAAAATACATACAGCAAGCTCTCTCTGGTTGACTTAGCTGGAAGTGAAGGATTAATTGCCGAAGATGATAGCAGTGAACGTGTGACGGACTTGCTGCATGTCATGAAATCACTTTCAGCATTGGGAGATGTTTTGTCTTCTTTGACTTCGAAAAAGGATGCTATTCCTTATGAAAATTCAATGCTCACTAAAGTACTTGCAGACTCGCTAGGTGGAAGTTCAAAAACTCTGATGATTGTTAATGTCTGTCCAAATGCCTTGAATTTGTCGGAGACATTAGCATCTCTCAATTTTGCTTCTAGAGCTCGAAATGCTGTTCTAAGCCTTGGTAATCGAGATACAATTAAGAAATGGAGAGATACAGCAAATGATGCACGTAAGGAGTTGTATGAAAAGGAAAAAGAAAGTCAAGATCTGAAACAAGAGGTTTTGGGACTTAAACATGCACTGAAGGATGCCAATGATCAGTGTGTCTTACTCTTCAATGAAGTCCAGAAGGCGTGGAAAGTTTCTTATACATTACAGTCAGATTTAAAGTCAGAGAATATTATGCTTGCAGATAAGCAAAAGATAGAAAGGGAACAAAACGCACAGCTTAGAAACCAAGTTGCTCAACTGTTACAGGTAGAGCAAGACCAAAAGATACAGATCGAACAACGAGATTCTACAATTCAGGTTTTGCAGGTTGTAGAACAGCTGTTCAATGATAATGCTGTGTTATATTTACCTGATTTATTTTTTGGTAACGTATACTTCATTGGCTTGGAGTGGTCTGATGTGATGACAGATAACAAAGACACAATGGCCAGAATGTCAGATGCAATGGTTGGTTTGACCTACGCTGTTGCTCAGATCCAGAAAATTTGGAAGTTACTTTTGCTGAAGAGGGGATTGAGTTCTGAGATTCGTTATGCCGGTCATGTGAACCCACAAATAATGGTGGCACTTTTCATTGTCAAGTGGAATGAACATGTTTCGAGGTTCAATTTCATTGCATTATTAAAAGGAGTTCTGGAGTTGAATTACGATGGAACTATGGACAAAATTAAAAGCATAGAATCCAAACTCAATGAAGCTCTTCATTCCAGTGATGGTCGGTCAACATTAGGCTCAGAACTGGGGTCTGCAACTCTGTCAAATTCCAAGGCAATTGGGGATGACATGGCATCTCCTCCCGTAACTAAGAAACTGGAAGAGGAGCTTAAAAAACGGGATGCATTAATAGAGTTGTCAAGTCCACTATCCAAGGGGCCAAACAATGTTCAGTCTCAGGACCTTGTGAGGAATGATAGTAGAGGGCTGGATGTTCCTTCATCACTAGCTGTGACTGCAGATAAAACTGATGGTACAGTTGCTCTGGTGAAATCAGGTCCTGAGAAAGTTAAAACTACCCCTGCAGGAGAATATCTTACTTCTGCCTTGAATGATTTTGACCCTGAACAACATGACAGTCTTGCTGCCATTTCAGATGGTGCAAACAAACTTTTGATGCTGGTTCTGGCTGCAGTAATTAAAGCTGGGGCTTCTAGGGAGCATGAAATACTTGCTGAAATAAGAGATGCTGTTTTCTCTTTTATTCGTAAAATGGAACCGCAGAGGGTAATGGACACCATGCTTGTATCCCGTGTTAGAATTTTGTATATTAGATCTTTGCTTGCTAGATCACCAGAGCTGCAGTCCATCAAGGTTTCTCCTGTTGAGAATTTTCTAGAGAAGGCTAATACTGGGCGTAGTAGAAGCTCCAGTCGTGGTAGCAGCCCTGGAAGAACTCCTGTGAGCTATGTTGATGTGCAGGTCCAAGGGTTCAAAGTGAATCTAAAGCCAGAAAAGAAGTCCAAGTTCTCATCTGTTGTATCAAAGATACGCGGACTTGATCAGGACTCTCCACGGCAGCAGATAACTGCAGGAAAGCTTAGGGAAATAAATGAGGAAGCAAAGATTTTTGCAGTTGGAAATAAAGCTCTTGCTGCTCTCTTTGTTCATACACCAGCCGGTGAGCTGCAGCGCCAACTCAGATCCTGGCTTGGAGAGCATTTTGACTTTCTTTCTGTTACGGGAGATGATGCATCAGGAGGGGCAACTGGTCAGTTGGAGCTTCTTTCAACTGCAATAATGGATGGTTGGATGGCCGGACTTGGTGCTGCAATTCCTCCAAATACAGATGCTCTTGGTCAACTTCTATCTGAGTATTCGAAGCGGGTTTATAGTTCTCAGTTGCAGCATCTGAAGGACATTGCTGGTACATTGGCATCAGAAGGGGCAGAAGATGGAGCACAAGTTGCAAAATTGCGATCAGCTCTTGAGTCTGTTGATCACAAAAGGAGAAAGATTTTGCAACAAATAAGAAGTGATGCAGCCTTATTGACATTGGAAGATGGACGTCCGCCTATTCAGAATCCTTCTACTGCTGCCGAAGATGCACGATTAGCATCTCTCATTTCCCTTGATGGCATAGTGAAGCAAGTGAAGGATATAATGCGACAATCCTCTGTAAGTACCTTGAGCAAGAGTAAAAAACAACTATTGCTTGCTTCTCTAGATGAACTTGCCGAACGGATGCCTTCCCTTCTTGAGATTGATCATCCATGTGCACAAAGGCAAATTGCAGATGCTCGTCATGTGATTCAGTCCATTCCTGAAGAAGATGATAACCTTCATGAACAGTCTCATGCTCGCAAACCATCTACAGATTTGGGATATGGTACTGAAACTGATGTGGCCCAATGGAATGTCCTGCAGTTCAACACAGGCTCAACAACCCCATTCATCATCAAGTGTGGAGCAAACTCAAATTCAGAATTAGTTATCAAAGCAGATTCCAAGATTCAAGAGCCTAAAGGTGGTGAGATTGTGAGGGTTGTCCCAAGACCTTCGGTTCTTGAAAATATGGGCCTTGAGGAGATGAAACATGTATTCTCCCAACTCCCTGAGGCTCTAAGCTTGCTTGCCTTGGCAAGGACTGCAGATGGAACACGTGCTCGGTATTCTCGGTTGTACCGGACTTTGGCCATGAAAGTTCCCTCACTGAGGGATTTAGTTGGTGAGCTTGAAAAGGGGGAGTCCTAA

Protein Analysis

1380

Amino Acids

152.71

Weight (kDa)

5.99

Isoelectric Point (pI)

40.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Microtub_bd PF16796 136 - 290 1.7e-35 Microtubule binding
Kinesin PF00225 156 - 463 7.5e-83 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 70
AatII GACGTC 2 cut(s) 203, 3460
Acc36I ACCTGC 2 cut(s) 1750, 2860
AccI GTMKAC 2 cut(s) 86, 1827
AccII CGCG 2 cut(s) 55, 2943
AclWI GGATC 5 cut(s) 736, 916, 1001, 1924, 3087
AcoI YGGCCR 3 cut(s) 1881, 3204, 4083
AcsI RAATTY 9 cut(s) 387, 575, 1252, 1339, 1938, 2215, 2709, 2779, 3868
AcuI CTGAAG 5 cut(s) 483, 1547, 1979, 3323, 3735
AcvI CACGTG 1 cut(s) 4052
AcyI GRCGYC 4 cut(s) 83, 158, 200, 3457
AfaI GTAC 8 cut(s) 143, 469, 1272, 2425, 3319, 3574, 3781, 4073
AfiI CCNNNNNNNGG 6 cut(s) 571, 608, 3917, 4032, 4081, 4104
AflIII ACRYGT 4 cut(s) 1156, 2047, 3985, 4049
AjnI CCWGG 5 cut(s) 189, 219, 936, 2836, 3095
Alw21I GWGCWC 5 cut(s) 843, 1384, 3352, 3670, 4057
Alw26I GTCTC 4 cut(s) 988, 1343, 2349, 3747
Alw44I GTGCAC 1 cut(s) 3666
AlwI GGATC 5 cut(s) 736, 916, 1001, 1924, 3087
AlwNI CAGNNNCTG 3 cut(s) 2450, 3096, 3301
AoxI GGCC 8 cut(s) 128, 192, 1881, 2327, 3204, 3795, 3967, 4083
ApaLI GTGCAC 1 cut(s) 3666
ApoI RAATTY 9 cut(s) 387, 575, 1252, 1339, 1938, 2215, 2709, 2779, 3868
AseI ATTAAT 3 cut(s) 402, 1130, 2297
Asp700I GAANNNNTTC 1 cut(s) 2154
AspLEI GCGC 2 cut(s) 57, 3084
AspS9I GGNCC 8 cut(s) 63, 599, 2327, 2350, 2447, 2872, 3796, 3967
AsuC2I CCSGG 1 cut(s) 132
AsuHPI GGTGA 6 cut(s) 557, 2449, 2733, 3083, 3932, 4130
AsuII TTCGAA 4 cut(s) 185, 293, 1226, 3269
AvaII GGWCC 5 cut(s) 63, 599, 2350, 2447, 2872
AxyI CCTNAGG 1 cut(s) 4005
BaeGI GKGCMC 1 cut(s) 3670
BalI TGGCCA 2 cut(s) 1883, 4085
BanII GRGCYC 2 cut(s) 843, 1384
BbrPI CACGTG 1 cut(s) 4052
BbsI GAAGAC 1 cut(s) 1206
Bbv12I GWGCWC 5 cut(s) 843, 1384, 3352, 3670, 4057
BceAI ACGGC 6 cut(s) 96, 105, 111, 133, 179, 2981
BciT130I CCWGG 5 cut(s) 191, 221, 938, 2838, 3097
BciVI GTATCC 2 cut(s) 522, 2707
BclI TGATCA 6 cut(s) 1035, 1068, 1540, 2950, 3388, 3655
BcnI CCSGG 1 cut(s) 132
BcoDI GTCTC 4 cut(s) 988, 1343, 2349, 3747
BfmI CTRYAG 9 cut(s) 2406, 2472, 2580, 2750, 2979, 3077, 3762, 3812, 4038
BfoI RGCGCY 1 cut(s) 3085
BfuAI ACCTGC 2 cut(s) 1750, 2860
BfuI GTATCC 2 cut(s) 522, 2707
BglII AGATCT 2 cut(s) 1489, 2723
BmcAI AGTACT 1 cut(s) 1272
Bme1390I CCNGG 6 cut(s) 132, 191, 221, 938, 2838, 3097
Bme18I GGWCC 5 cut(s) 63, 599, 2350, 2447, 2872
BmgT120I GGNCC 8 cut(s) 63, 599, 2327, 2350, 2447, 2872, 3796, 3967
BmiI GGNNCC 2 cut(s) 2328, 2667
BmrFI CCNGG 6 cut(s) 132, 191, 221, 938, 2838, 3097
BmrI ACTGGG 4 cut(s) 40, 1083, 2204, 2811
BmuI ACTGGG 4 cut(s) 40, 1083, 2204, 2811
BpiI GAAGAC 1 cut(s) 1206
BpmI CTGGAG 5 cut(s) 194, 203, 897, 2111, 2803
Bpu10I CCTNAGC 1 cut(s) 2990
Bpu14I TTCGAA 4 cut(s) 185, 293, 1226, 3269
BpuEI CTTGAG 4 cut(s) 3398, 3598, 3668, 3992
BpuMI CCSGG 1 cut(s) 132
BsaAI YACGTR 2 cut(s) 1454, 4052
BsaBI GATNNNNATC 2 cut(s) 1724, 3505
BsaHI GRCGYC 4 cut(s) 83, 158, 200, 3457
BsaWI WCCGGW 1 cut(s) 4074
BsaXI ACNNNNNCTCC 2 cut(s) 3339, 3369
Bsc4I CCNNNNNNNGG 6 cut(s) 571, 608, 3917, 4032, 4081, 4104
Bse118I RCCGGY 2 cut(s) 1991, 3068
Bse21I CCTNAGG 1 cut(s) 4005
Bse3DI GCAATG 3 cut(s) 1905, 2067, 3309
Bse8I GATNNNNATC 2 cut(s) 1724, 3505
BseBI CCWGG 5 cut(s) 191, 221, 938, 2838, 3097
BseJI GATNNNNATC 2 cut(s) 1724, 3505
BseLI CCNNNNNNNGG 6 cut(s) 571, 608, 3917, 4032, 4081, 4104
BseMI GCAATG 3 cut(s) 1905, 2067, 3309
BseRI GAGGAG 5 cut(s) 28, 782, 2238, 2288, 3989
BseSI GKGCMC 1 cut(s) 3670
BseYI CCCAGC 1 cut(s) 2594
BsgI GTGCAG 1 cut(s) 2888
Bsh1236I CGCG 2 cut(s) 55, 2943
BshFI GGCC 8 cut(s) 130, 194, 1883, 2329, 3206, 3797, 3969, 4085
BsiHKAI GWGCWC 5 cut(s) 843, 1384, 3352, 3670, 4057
BsiSI CCGG 5 cut(s) 131, 1992, 3069, 3207, 4075
BslFI GGGAC 2 cut(s) 1524, 3923
BslI CCNNNNNNNGG 6 cut(s) 571, 608, 3917, 4032, 4081, 4104
BsmAI GTCTC 4 cut(s) 988, 1343, 2349, 3747
BsmBI CGTCTC 1 cut(s) 988
BsmFI GGGAC 2 cut(s) 1524, 3923
BsmI GAATGC 1 cut(s) 301
BsnI GGCC 8 cut(s) 130, 194, 1883, 2329, 3206, 3797, 3969, 4085
Bsp119I TTCGAA 4 cut(s) 185, 293, 1226, 3269
Bsp1286I GDGCHC 5 cut(s) 843, 1384, 3352, 3670, 4057
BspANI GGCC 8 cut(s) 130, 194, 1883, 2329, 3206, 3797, 3969, 4085
BspFNI CGCG 2 cut(s) 55, 2943
BspHI TCATGA 2 cut(s) 1179, 3733
BspLI GGNNCC 2 cut(s) 2328, 2667
BspMAI CTGCAG 8 cut(s) 2410, 2476, 2584, 2754, 2983, 3081, 3816, 4042
BspMI ACCTGC 2 cut(s) 1750, 2860
BspPI GGATC 5 cut(s) 736, 916, 1001, 1924, 3087
BspQI GCTCTTC 1 cut(s) 2160
BspT104I TTCGAA 4 cut(s) 185, 293, 1226, 3269
BsrDI GCAATG 3 cut(s) 1905, 2067, 3309
BsrFI RCCGGY 2 cut(s) 1991, 3068
BssAI RCCGGY 2 cut(s) 1991, 3068
BssNAI GTATAC 1 cut(s) 1828
BssNI GRCGYC 4 cut(s) 83, 158, 200, 3457
BssT1I CCWWGG 5 cut(s) 1402, 2220, 2322, 2875, 4026
Bst1107I GTATAC 1 cut(s) 1828
Bst2UI CCWGG 5 cut(s) 191, 221, 938, 2838, 3097
Bst4CI ACNGT 7 cut(s) 743, 832, 1602, 1695, 2428, 2528, 3741
Bst6I CTCTTC 5 cut(s) 404, 1562, 1955, 2160, 2265
BstACI GRCGYC 4 cut(s) 83, 158, 200, 3457
BstAPI GCANNNNNTGC 3 cut(s) 1448, 3356, 4037
BstBAI YACGTR 2 cut(s) 1454, 4052
BstBI TTCGAA 4 cut(s) 185, 293, 1226, 3269
BstC8I GCNNGC 9 cut(s) 100, 237, 1094, 1632, 2733, 3606, 3751, 4019, 4023
BstDSI CCRYGG 2 cut(s) 742, 2963
BstENI CCTNNNNNAGG 2 cut(s) 4030, 4102
BstFNI CGCG 2 cut(s) 55, 2943
BstH2I RGCGCY 1 cut(s) 3085
BstHHI GCGC 2 cut(s) 57, 3084
BstMAI GTCTC 4 cut(s) 988, 1343, 2349, 3747
BstNI CCWGG 5 cut(s) 191, 221, 938, 2838, 3097
BstNSI RCATGY 4 cut(s) 1178, 1523, 2051, 3989
BstSCI CCNGG 6 cut(s) 130, 189, 219, 936, 2836, 3095
BstSFI CTRYAG 9 cut(s) 2406, 2472, 2580, 2750, 2979, 3077, 3762, 3812, 4038
BstSLI GKGCMC 1 cut(s) 3670
BstUI CGCG 2 cut(s) 55, 2943
BstV2I GAAGAC 1 cut(s) 1206
BstX2I RGATCY 6 cut(s) 728, 908, 1489, 1929, 2723, 3092
BstXI CCANNNNNNTGG 1 cut(s) 743
BstYI RGATCY 6 cut(s) 728, 908, 1489, 1929, 2723, 3092
BstZ17I GTATAC 1 cut(s) 1828
Bsu36I CCTNAGG 1 cut(s) 4005
BsuI GTATCC 2 cut(s) 522, 2707
BsuRI GGCC 8 cut(s) 130, 194, 1883, 2329, 3206, 3797, 3969, 4085
BtgI CCRYGG 2 cut(s) 742, 2963
BtsI GCAGTG 1 cut(s) 1156
BtsIMutI CAGTG 8 cut(s) 46, 956, 1071, 1156, 1523, 1550, 2170, 4100
BveI ACCTGC 2 cut(s) 1750, 2860
Cac8I GCNNGC 9 cut(s) 100, 237, 1094, 1632, 2733, 3606, 3751, 4019, 4023
CaiI CAGNNNCTG 3 cut(s) 2450, 3096, 3301
CciI TCATGA 2 cut(s) 1179, 3733
CfoI GCGC 2 cut(s) 57, 3084
Cfr10I RCCGGY 2 cut(s) 1991, 3068
Cfr13I GGNCC 8 cut(s) 63, 599, 2327, 2350, 2447, 2872, 3796, 3967
CseI GACGC 3 cut(s) 72, 147, 721
Csp6I GTAC 8 cut(s) 142, 468, 1271, 2424, 3318, 3573, 3780, 4072
CviQI GTAC 8 cut(s) 142, 468, 1271, 2424, 3318, 3573, 3780, 4072
DraI TTTAAA 1 cut(s) 1611
DrdI GACNNNNNNGTC 1 cut(s) 70
DseDI GACNNNNNNGTC 1 cut(s) 70
EaeI YGGCCR 3 cut(s) 1881, 3204, 4083
Eam1104I CTCTTC 5 cut(s) 404, 1562, 1955, 2160, 2265
EarI CTCTTC 5 cut(s) 404, 1562, 1955, 2160, 2265
EciI GGCGGA 3 cut(s) 20, 151, 3450
Ecl136II GAGCTC 2 cut(s) 841, 1382
Eco130I CCWWGG 5 cut(s) 1402, 2220, 2322, 2875, 4026
Eco24I GRGCYC 2 cut(s) 843, 1384
Eco47I GGWCC 5 cut(s) 63, 599, 2350, 2447, 2872
Eco53kI GAGCTC 2 cut(s) 841, 1382
Eco57I CTGAAG 5 cut(s) 483, 1547, 1979, 3323, 3735
Eco72I CACGTG 1 cut(s) 4052
Eco81I CCTNAGG 1 cut(s) 4005
EcoICRI GAGCTC 2 cut(s) 841, 1382
EcoNI CCTNNNNNAGG 2 cut(s) 4030, 4102
EcoO109I RGGNCCY 2 cut(s) 2350, 2447
EcoRII CCWGG 5 cut(s) 189, 219, 936, 2836, 3095
EcoT14I CCWWGG 5 cut(s) 1402, 2220, 2322, 2875, 4026
EcoT22I ATGCAT 2 cut(s) 2296, 3145
EcoT38I GRGCYC 2 cut(s) 843, 1384
ErhI CCWWGG 5 cut(s) 1402, 2220, 2322, 2875, 4026
Esp3I CGTCTC 1 cut(s) 988
FalI AAGNNNNNCTT 4 cut(s) 606, 638, 2262, 2294
FaqI GGGAC 2 cut(s) 1524, 3923
FauI CCCGC 1 cut(s) 3267
FbaI TGATCA 6 cut(s) 1035, 1068, 1540, 2950, 3388, 3655
FblI GTMKAC 2 cut(s) 86, 1827
FriOI GRGCYC 2 cut(s) 843, 1384
GlaI GCGC 2 cut(s) 56, 3083
GsaI CCCAGC 1 cut(s) 2598
GsuI CTGGAG 5 cut(s) 194, 203, 897, 2111, 2803
HaeII RGCGCY 1 cut(s) 3085
HaeIII GGCC 8 cut(s) 130, 194, 1883, 2329, 3206, 3797, 3969, 4085
HapII CCGG 5 cut(s) 131, 1992, 3069, 3207, 4075
HgaI GACGC 3 cut(s) 72, 147, 721
HhaI GCGC 2 cut(s) 57, 3084
Hin1I GRCGYC 4 cut(s) 83, 158, 200, 3457
Hin6I GCGC 2 cut(s) 55, 3082
HinP1I GCGC 2 cut(s) 55, 3082
HincII GTYRAC 4 cut(s) 87, 1108, 2178, 3251
HindII GTYRAC 4 cut(s) 87, 1108, 2178, 3251
HindIII AAGCTT 3 cut(s) 233, 2987, 4015
HpaII CCGG 5 cut(s) 131, 1992, 3069, 3207, 4075
HphI GGTGA 6 cut(s) 557, 2449, 2733, 3083, 3932, 4130
Hpy99I CGWCG 8 cut(s) 76, 82, 88, 91, 97, 119, 163, 205
HpyCH4III ACNGT 7 cut(s) 743, 832, 1602, 1695, 2428, 2528, 3741
HpyCH4IV ACGT 6 cut(s) 200, 1156, 1453, 1824, 3457, 4051
HpySE526I ACGT 6 cut(s) 200, 1156, 1453, 1824, 3457, 4051
Hsp92I GRCGYC 4 cut(s) 83, 158, 200, 3457
HspAI GCGC 2 cut(s) 55, 3082
Ksp22I TGATCA 6 cut(s) 1035, 1068, 1540, 2950, 3388, 3655
LguI GCTCTTC 1 cut(s) 2160
MaeII ACGT 6 cut(s) 200, 1156, 1453, 1824, 3457, 4051
MfeI CAATTG 1 cut(s) 2226
MflI RGATCY 6 cut(s) 728, 908, 1489, 1929, 2723, 3092
MhlI GDGCHC 5 cut(s) 843, 1384, 3352, 3670, 4057
MlsI TGGCCA 2 cut(s) 1883, 4085
MluNI TGGCCA 2 cut(s) 1883, 4085
MlyI GAGTC 3 cut(s) 1274, 2951, 3389
MmeI TCCRAC 6 cut(s) 585, 589, 1326, 3007, 3147, 3179
Mox20I TGGCCA 2 cut(s) 1883, 4085
Mph1103I ATGCAT 2 cut(s) 2296, 3145
MroXI GAANNNNTTC 1 cut(s) 2154
MscI TGGCCA 2 cut(s) 1883, 4085
MslI CAYNNNNRTG 3 cut(s) 741, 2163, 3663
Msp20I TGGCCA 2 cut(s) 1883, 4085
MspA1I CMGCKG 2 cut(s) 397, 1774
MspI CCGG 5 cut(s) 131, 1992, 3069, 3207, 4075
MspR9I CCNGG 6 cut(s) 132, 191, 221, 938, 2838, 3097
MunI CAATTG 1 cut(s) 2226
Mva1269I GAATGC 1 cut(s) 301
MvaI CCWGG 5 cut(s) 191, 221, 938, 2838, 3097
MvnI CGCG 2 cut(s) 55, 2943
NciI CCSGG 1 cut(s) 132
NlaIV GGNNCC 2 cut(s) 2328, 2667
NmeAIII GCCGAG 1 cut(s) 131
NmuCI GTSAC 4 cut(s) 196, 535, 1159, 2401
NsiI ATGCAT 2 cut(s) 2296, 3145
NspI RCATGY 4 cut(s) 1178, 1523, 2051, 3989
NspV TTCGAA 4 cut(s) 185, 293, 1226, 3269
PagI TCATGA 2 cut(s) 1179, 3733
PciI ACATGT 2 cut(s) 2047, 3985
PciSI GCTCTTC 1 cut(s) 2160
PcsI WCGNNNNNNNCGW 2 cut(s) 80, 95
PctI GAATGC 1 cut(s) 301
PdmI GAANNNNTTC 1 cut(s) 2154
PflFI GACNNNGTC 1 cut(s) 82
PfoI TCCNGGA 2 cut(s) 219, 936
PleI GAGTC 3 cut(s) 1274, 2951, 3388
PmaCI CACGTG 1 cut(s) 4052
PmlI CACGTG 1 cut(s) 4052
PpsI GAGTC 3 cut(s) 1274, 2951, 3388
Ppu21I YACGTR 2 cut(s) 1454, 4052
PpuMI RGGWCCY 2 cut(s) 2350, 2447
PscI ACATGT 2 cut(s) 2047, 3985
PshBI ATTAAT 3 cut(s) 402, 1130, 2297
Psp124BI GAGCTC 2 cut(s) 843, 1384
Psp5II RGGWCCY 2 cut(s) 2350, 2447
Psp6I CCWGG 5 cut(s) 189, 219, 936, 2836, 3095
PspCI CACGTG 1 cut(s) 4052
PspFI CCCAGC 1 cut(s) 2594
PspGI CCWGG 5 cut(s) 189, 219, 936, 2836, 3095
PspN4I GGNNCC 2 cut(s) 2328, 2667
PspPI GGNCC 8 cut(s) 63, 599, 2327, 2350, 2447, 2872, 3796, 3967
PspPPI RGGWCCY 2 cut(s) 2350, 2447
PstI CTGCAG 8 cut(s) 2410, 2476, 2584, 2754, 2983, 3081, 3816, 4042
PstNI CAGNNNCTG 3 cut(s) 2450, 3096, 3301
PsuI RGATCY 6 cut(s) 728, 908, 1489, 1929, 2723, 3092
PsyI GACNNNGTC 1 cut(s) 82
PvuII CAGCTG 1 cut(s) 1774
RsaI GTAC 8 cut(s) 143, 469, 1272, 2425, 3319, 3574, 3781, 4073
RsaNI GTAC 8 cut(s) 142, 468, 1271, 2424, 3318, 3573, 3780, 4072
RseI CAYNNNNRTG 3 cut(s) 741, 2163, 3663
SacI GAGCTC 2 cut(s) 843, 1384
SalI GTCGAC 1 cut(s) 85
SapI GCTCTTC 1 cut(s) 2160
Sau96I GGNCC 8 cut(s) 63, 599, 2327, 2350, 2447, 2872, 3796, 3967
SbfI CCTGCAGG 1 cut(s) 2476
ScaI AGTACT 1 cut(s) 1272
SchI GAGTC 3 cut(s) 1274, 2951, 3389
ScrFI CCNGG 6 cut(s) 132, 191, 221, 938, 2838, 3097
SdaI CCTGCAGG 1 cut(s) 2476
SduI GDGCHC 5 cut(s) 843, 1384, 3352, 3670, 4057
SfcI CTRYAG 9 cut(s) 2406, 2472, 2580, 2750, 2979, 3077, 3762, 3812, 4038
SfuI TTCGAA 4 cut(s) 185, 293, 1226, 3269
SgrDI CGTCGACG 1 cut(s) 85
SinI GGWCC 5 cut(s) 63, 599, 2350, 2447, 2872
SmiMI CAYNNNNRTG 3 cut(s) 741, 2163, 3663
SmlI CTYRAG 4 cut(s) 3377, 3577, 3647, 3971
SmoI CTYRAG 4 cut(s) 3377, 3577, 3647, 3971
Sse8387I CCTGCAGG 1 cut(s) 2476
SspI AATATT 1 cut(s) 1624
SstI GAGCTC 2 cut(s) 843, 1384
StyD4I CCNGG 6 cut(s) 130, 189, 219, 936, 2836, 3095
StyI CCWWGG 5 cut(s) 1402, 2220, 2322, 2875, 4026
TaaI ACNGT 7 cut(s) 743, 832, 1602, 1695, 2428, 2528, 3741
TaiI ACGT 6 cut(s) 203, 1159, 1456, 1827, 3460, 4054
TaqII GACCGA 1 cut(s) 2163
TatI WGTACW 1 cut(s) 1270
TauI GCSGC 2 cut(s) 55, 158
TscAI CASTG 8 cut(s) 46, 963, 1078, 1156, 1530, 1550, 2170, 4107
TseFI GTSAC 4 cut(s) 196, 535, 1159, 2401
Tsp45I GTSAC 4 cut(s) 196, 535, 1159, 2401
TspGWI ACGGA 4 cut(s) 521, 617, 1178, 3646
TspRI CASTG 8 cut(s) 46, 963, 1078, 1156, 1530, 1550, 2170, 4107
Tth111I GACNNNGTC 1 cut(s) 82
VneI GTGCAC 1 cut(s) 3666
VpaK11BI GGWCC 5 cut(s) 63, 599, 2350, 2447, 2872
VspI ATTAAT 3 cut(s) 402, 1130, 2297
XagI CCTNNNNNAGG 2 cut(s) 4030, 4102
XapI RAATTY 9 cut(s) 387, 575, 1252, 1339, 1938, 2215, 2709, 2779, 3868
XbaI TCTAGA 4 cut(s) 809, 1376, 2785, 3613
XceI RCATGY 4 cut(s) 1178, 1523, 2051, 3989
XmiI GTMKAC 2 cut(s) 86, 1827
XmnI GAANNNNTTC 1 cut(s) 2154
ZraI GACGTC 2 cut(s) 201, 3458
ZrmI AGTACT 1 cut(s) 1272
Zsp2I ATGCAT 2 cut(s) 2296, 3145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.