Rmu_sc0001363.1_g000009
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001363.1
Physical Location & Seq
Forward (+)
28290 .. 38714
10425 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001363.1_g000009.1.cds

Sequence Viewer

Length: 1506 bp
atgcaaaatctagatgcaagtcgaatcgaggcaaactctttcgccggagataaccttctgacctgcgctctatccccaatcggatcagagattgtcaacgtcgttgtagtggtggctgtgtcggcggaggtcaccaacccgtggacagtggctccgctgccgaggacgaagatggtgacggctgatgaaggttcttcagttgttgagtatcctgatgattgcaatatccgtgtcactactggtgatactgccttgtccaaccccaagaaggaatttgaacttgacagagtttatggacctcatgttggacaagccgagcttttccgtgatgttcagccattggtgcaatcagcattggatggatataatgtttcaatatatgcttatgggcaaaccaactcaggaaagacacacacgatggaaggatctagccatgaccgtggtttatatgctcgttcgtttgaggagctatttgatttagccaattctgattcaacttctacttctagatttaagttctctgttacagtttttgagctctacaatgaacagataagggatttactctcagaatcaggagatgctttgccaaagattcgcatgggatctccagatttctttgtagaacttgtccaggaaaaagttgataacccactggacttctctaaagtattgaaagctgcatttcagagacgaggaaatgatccctcaaagttcaatgtttctcatttgatcatcacgatacatatatactataataatttgatcactggggaaaatacatacagcaagctctctctggttgacttagctggaagtgaagggtcaattgccgaagatgatagcagtgaacgtgtgacggacttgctgcatgtcatgaaatcactttcagcattgggagatgttttgtcttctttgacttcgaaaaaggatgctatcccttatgaaaattcaatgctcactaaagtacttgcagactcactaggtggaagttcaaaaactctgatgattgttaatgtctgtccaaatgccttgaatttgtcggagacattatcatctctcaattttgcttctagagctcgaaatgctgttctaagccttggtaatcgagatacaattaagaaatggagagatacagcaaatgatgcacgtaaggagttgtatgaaaaggaaaaagaaagtcaagatctgaaacaagaggttttgggacttaaacatgcactgaaggatgccaatgatcagtgtgtcctactcttcaatgaagtccagaaggcgtggaaagtttcttatacattgcagtcagatttaaagtcagagaatattatgcttgcagataagcaaaagatagaaagggaacaaaacgcacagcttagaaaccaagttgctcaactgttacaggtagagcaagaccaaaagatacagattgaacaacgagattctacaattcaggttttgcaggttggtcatgtctgcttattattctcatttacttttgttaaggtttaa

Protein Analysis

501

Amino Acids

55.63

Weight (kDa)

5.1

Isoelectric Point (pI)

30.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 71, 1447
AccB7I CCANNNNNTGG 1 cut(s) 141
AciI CCGC 2 cut(s) 125, 155
AclWI GGATC 4 cut(s) 91, 433, 613, 698
AcsI RAATTY 3 cut(s) 272, 949, 1036
AcuI CTGAAG 2 cut(s) 180, 1244
AdeI CACNNNGTG 1 cut(s) 986
AfaI GTAC 1 cut(s) 969
AfiI CCNNNNNNNGG 3 cut(s) 141, 268, 305
AflIII ACRYGT 1 cut(s) 853
AjnI CCWGG 1 cut(s) 633
AluBI AGCT 8 cut(s) 319, 469, 538, 680, 793, 812, 1079, 1369
AluI AGCT 8 cut(s) 319, 469, 538, 680, 793, 812, 1079, 1369
Alw21I GWGCWC 2 cut(s) 540, 1081
Alw26I GTCTC 2 cut(s) 685, 1040
AlwI GGATC 4 cut(s) 91, 433, 613, 698
ApeKI GCWGC 3 cut(s) 157, 680, 868
ApoI RAATTY 3 cut(s) 272, 949, 1036
AspLEI GCGC 1 cut(s) 68
AspS9I GGNCC 1 cut(s) 296
AsuHPI GGTGA 3 cut(s) 124, 187, 254
AsuII TTCGAA 1 cut(s) 923
AvaII GGWCC 1 cut(s) 296
BanII GRGCYC 2 cut(s) 540, 1081
BbsI GAAGAC 1 cut(s) 903
Bbv12I GWGCWC 2 cut(s) 540, 1081
BbvI GCAGC 3 cut(s) 144, 667, 855
BccI CCATC 3 cut(s) 166, 353, 412
BceAI ACGGC 1 cut(s) 195
BciT130I CCWGG 1 cut(s) 635
BciVI GTATCC 1 cut(s) 219
BclI TGATCA 3 cut(s) 732, 765, 1237
BcoDI GTCTC 2 cut(s) 685, 1040
BfaI CTAG 5 cut(s) 11, 429, 507, 983, 1074
BfuAI ACCTGC 2 cut(s) 71, 1447
BfuI GTATCC 1 cut(s) 219
BglII AGATCT 1 cut(s) 1186
BisI GCNGC 3 cut(s) 158, 681, 869
BlsI GCNGC 3 cut(s) 159, 682, 870
BmcAI AGTACT 1 cut(s) 969
Bme1390I CCNGG 1 cut(s) 635
Bme18I GGWCC 1 cut(s) 296
BmgT120I GGNCC 1 cut(s) 296
BmiI GGNNCC 1 cut(s) 153
BmrFI CCNGG 1 cut(s) 635
BmrI ACTGGG 1 cut(s) 780
BmsI GCATC 5 cut(s) 4, 571, 922, 1135, 1219
BmuI ACTGGG 1 cut(s) 780
BpiI GAAGAC 1 cut(s) 903
BplI GAGNNNNNCTC 2 cut(s) 20, 52
BpmI CTGGAG 1 cut(s) 594
Bpu14I TTCGAA 1 cut(s) 923
BsaAI YACGTR 1 cut(s) 1151
BsaJI CCNNGG 4 cut(s) 140, 161, 439, 1099
BsaXI ACNNNNNCTCC 2 cut(s) 136, 166
Bsc4I CCNNNNNNNGG 3 cut(s) 141, 268, 305
Bse1I ACTGG 3 cut(s) 244, 660, 775
Bse3DI GCAATG 1 cut(s) 1292
BseBI CCWGG 1 cut(s) 635
BseDI CCNNGG 4 cut(s) 140, 161, 439, 1099
BseGI GGATG 3 cut(s) 364, 937, 1234
BseLI CCNNNNNNNGG 3 cut(s) 141, 268, 305
BseMI GCAATG 1 cut(s) 1292
BseMII CTCAG 2 cut(s) 414, 582
BseNI ACTGG 3 cut(s) 244, 660, 775
BseRI GAGGAG 1 cut(s) 479
BseXI GCAGC 3 cut(s) 144, 667, 855
BsiHKAI GWGCWC 2 cut(s) 540, 1081
BsiSI CCGG 1 cut(s) 45
BslFI GGGAC 1 cut(s) 1221
BslI CCNNNNNNNGG 3 cut(s) 141, 268, 305
BsmAI GTCTC 2 cut(s) 685, 1040
BsmBI CGTCTC 1 cut(s) 685
BsmFI GGGAC 1 cut(s) 1221
Bsp119I TTCGAA 1 cut(s) 923
Bsp1286I GDGCHC 2 cut(s) 540, 1081
Bsp143I GATC 8 cut(s) 83, 425, 605, 703, 732, 765, 1186, 1237
BspACI CCGC 2 cut(s) 125, 155
BspCNI CTCAG 2 cut(s) 413, 581
BspHI TCATGA 1 cut(s) 876
BspLI GGNNCC 1 cut(s) 153
BspMI ACCTGC 2 cut(s) 71, 1447
BspPI GGATC 4 cut(s) 91, 433, 613, 698
BspT104I TTCGAA 1 cut(s) 923
BsrDI GCAATG 1 cut(s) 1292
BsrI ACTGG 3 cut(s) 244, 660, 775
BssECI CCNNGG 4 cut(s) 140, 161, 439, 1099
BssMI GATC 8 cut(s) 83, 425, 605, 703, 732, 765, 1186, 1237
BssT1I CCWWGG 1 cut(s) 1099
Bst2UI CCWGG 1 cut(s) 635
Bst4CI ACNGT 4 cut(s) 148, 440, 529, 1392
Bst6I CTCTTC 1 cut(s) 1259
BstAPI GCANNNNNTGC 1 cut(s) 1145
BstBAI YACGTR 1 cut(s) 1151
BstBI TTCGAA 1 cut(s) 923
BstC8I GCNNGC 2 cut(s) 791, 1329
BstDEI CTNAG 5 cut(s) 400, 568, 808, 1094, 1370
BstDSI CCRYGG 2 cut(s) 140, 439
BstEII GGTNACC 1 cut(s) 130
BstF5I GGATG 3 cut(s) 364, 937, 1234
BstHHI GCGC 1 cut(s) 68
BstKTI GATC 8 cut(s) 86, 428, 608, 706, 735, 768, 1189, 1240
BstMAI GTCTC 2 cut(s) 685, 1040
BstMBI GATC 8 cut(s) 83, 425, 605, 703, 732, 765, 1186, 1237
BstMWI GCNNNNNNNGC 5 cut(s) 122, 343, 1076, 1085, 1145
BstNI CCWGG 1 cut(s) 635
BstNSI RCATGY 2 cut(s) 875, 1220
BstPI GGTNACC 1 cut(s) 130
BstSCI CCNGG 1 cut(s) 633
BstV1I GCAGC 3 cut(s) 144, 667, 855
BstV2I GAAGAC 1 cut(s) 903
BstX2I RGATCY 3 cut(s) 425, 605, 1186
BstXI CCANNNNNNTGG 1 cut(s) 440
BstYI RGATCY 3 cut(s) 425, 605, 1186
BsuI GTATCC 1 cut(s) 219
BtgI CCRYGG 2 cut(s) 140, 439
BtsCI GGATG 3 cut(s) 364, 937, 1234
BtsI GCAGTG 1 cut(s) 853
BtsIMutI CAGTG 6 cut(s) 153, 653, 768, 853, 1220, 1247
BveI ACCTGC 2 cut(s) 71, 1447
Cac8I GCNNGC 2 cut(s) 791, 1329
CciI TCATGA 1 cut(s) 876
CfoI GCGC 1 cut(s) 68
Cfr13I GGNCC 1 cut(s) 296
Csp6I GTAC 1 cut(s) 968
CviAII CATG 7 cut(s) 302, 434, 601, 872, 877, 1217, 1466
CviQI GTAC 1 cut(s) 968
DdeI CTNAG 5 cut(s) 400, 568, 808, 1094, 1370
DpnI GATC 8 cut(s) 85, 427, 607, 705, 734, 767, 1188, 1239
DpnII GATC 8 cut(s) 83, 425, 605, 703, 732, 765, 1186, 1237
DraI TTTAAA 1 cut(s) 1308
DraIII CACNNNGTG 1 cut(s) 986
Eam1104I CTCTTC 1 cut(s) 1259
EarI CTCTTC 1 cut(s) 1259
EciI GGCGGA 1 cut(s) 140
Ecl136II GAGCTC 2 cut(s) 538, 1079
Eco130I CCWWGG 1 cut(s) 1099
Eco24I GRGCYC 2 cut(s) 540, 1081
Eco47I GGWCC 1 cut(s) 296
Eco53kI GAGCTC 2 cut(s) 538, 1079
Eco57I CTGAAG 2 cut(s) 180, 1244
Eco91I GGTNACC 1 cut(s) 130
EcoICRI GAGCTC 2 cut(s) 538, 1079
EcoO65I GGTNACC 1 cut(s) 130
EcoRII CCWGG 1 cut(s) 633
EcoT14I CCWWGG 1 cut(s) 1099
EcoT38I GRGCYC 2 cut(s) 540, 1081
ErhI CCWWGG 1 cut(s) 1099
Esp3I CGTCTC 1 cut(s) 685
FaeI CATG 7 cut(s) 305, 437, 604, 875, 880, 1220, 1469
FalI AAGNNNNNCTT 2 cut(s) 303, 335
FaqI GGGAC 1 cut(s) 1221
FatI CATG 7 cut(s) 301, 433, 600, 871, 876, 1216, 1465
FbaI TGATCA 3 cut(s) 732, 765, 1237
Fnu4HI GCNGC 3 cut(s) 158, 681, 869
FokI GGATG 3 cut(s) 371, 944, 1241
FriOI GRGCYC 2 cut(s) 540, 1081
Fsp4HI GCNGC 3 cut(s) 158, 681, 869
FspBI CTAG 5 cut(s) 11, 429, 507, 983, 1074
GlaI GCGC 1 cut(s) 67
GluI GCNGC 3 cut(s) 158, 681, 869
GsuI CTGGAG 1 cut(s) 594
HapII CCGG 1 cut(s) 45
HhaI GCGC 1 cut(s) 68
Hin1II CATG 7 cut(s) 305, 437, 604, 875, 880, 1220, 1469
Hin6I GCGC 1 cut(s) 66
HinP1I GCGC 1 cut(s) 66
HincII GTYRAC 2 cut(s) 97, 805
HindII GTYRAC 2 cut(s) 97, 805
HinfI GANTC 6 cut(s) 24, 491, 572, 595, 977, 1436
HpaII CCGG 1 cut(s) 45
HphI GGTGA 3 cut(s) 124, 187, 254
Hpy166II GTNNAC 4 cut(s) 97, 144, 805, 851
Hpy8I GTNNAC 4 cut(s) 97, 144, 805, 851
Hpy99I CGWCG 1 cut(s) 104
HpyAV CCTTC 7 cut(s) 65, 182, 262, 416, 815, 1219, 1264
HpyCH4III ACNGT 4 cut(s) 148, 440, 529, 1392
HpyCH4IV ACGT 3 cut(s) 99, 853, 1150
HpyF10VI GCNNNNNNNGC 5 cut(s) 122, 343, 1076, 1085, 1145
HpyF3I CTNAG 5 cut(s) 400, 568, 808, 1094, 1370
HpySE526I ACGT 3 cut(s) 99, 853, 1150
Hsp92II CATG 7 cut(s) 305, 437, 604, 875, 880, 1220, 1469
HspAI GCGC 1 cut(s) 66
Ksp22I TGATCA 3 cut(s) 732, 765, 1237
Kzo9I GATC 8 cut(s) 83, 425, 605, 703, 732, 765, 1186, 1237
LmnI GCTCC 2 cut(s) 157, 466
Lsp1109I GCAGC 3 cut(s) 144, 667, 855
LweI GCATC 5 cut(s) 4, 571, 922, 1135, 1219
MaeI CTAG 5 cut(s) 11, 429, 507, 983, 1074
MaeII ACGT 3 cut(s) 99, 853, 1150
MaeIII GTNAC 6 cut(s) 130, 175, 232, 523, 856, 1392
MalI GATC 8 cut(s) 85, 427, 607, 705, 734, 767, 1188, 1239
MboI GATC 8 cut(s) 83, 425, 605, 703, 732, 765, 1186, 1237
MboII GAAGA 5 cut(s) 181, 186, 848, 903, 1246
MfeI CAATTG 1 cut(s) 828
MflI RGATCY 3 cut(s) 425, 605, 1186
MhlI GDGCHC 2 cut(s) 540, 1081
MluCI AATT 9 cut(s) 272, 484, 760, 828, 949, 1036, 1063, 1116, 1443
MlyI GAGTC 1 cut(s) 971
MmeI TCCRAC 3 cut(s) 282, 286, 1023
MnlI CCTC 8 cut(s) 22, 121, 156, 309, 457, 689, 718, 1192
MseI TTAA 7 cut(s) 513, 1014, 1119, 1212, 1307, 1497, 1504
MslI CAYNNNNRTG 1 cut(s) 438
MspA1I CMGCKG 1 cut(s) 157
MspI CCGG 1 cut(s) 45
MspR9I CCNGG 1 cut(s) 635
MunI CAATTG 1 cut(s) 828
MvaI CCWGG 1 cut(s) 635
MwoI GCNNNNNNNGC 5 cut(s) 122, 343, 1076, 1085, 1145
NdeII GATC 8 cut(s) 83, 425, 605, 703, 732, 765, 1186, 1237
NlaIII CATG 7 cut(s) 305, 437, 604, 875, 880, 1220, 1469
NlaIV GGNNCC 1 cut(s) 153
NmeAIII GCCGAG 2 cut(s) 186, 340
NmuCI GTSAC 4 cut(s) 130, 175, 232, 856
NspI RCATGY 2 cut(s) 875, 1220
NspV TTCGAA 1 cut(s) 923
PagI TCATGA 1 cut(s) 876
PfeI GAWTC 5 cut(s) 24, 491, 572, 595, 1436
PflMI CCANNNNNTGG 1 cut(s) 141
PfoI TCCNGGA 1 cut(s) 633
PkrI GCNGC 3 cut(s) 159, 682, 870
PleI GAGTC 1 cut(s) 971
PpsI GAGTC 1 cut(s) 971
Ppu21I YACGTR 1 cut(s) 1151
Psp124BI GAGCTC 2 cut(s) 540, 1081
Psp6I CCWGG 1 cut(s) 633
PspEI GGTNACC 1 cut(s) 130
PspGI CCWGG 1 cut(s) 633
PspN4I GGNNCC 1 cut(s) 153
PspPI GGNCC 1 cut(s) 296
PsuI RGATCY 3 cut(s) 425, 605, 1186
RsaI GTAC 1 cut(s) 969
RsaNI GTAC 1 cut(s) 968
RseI CAYNNNNRTG 1 cut(s) 438
SacI GAGCTC 2 cut(s) 540, 1081
SaqAI TTAA 7 cut(s) 513, 1014, 1119, 1212, 1307, 1497, 1504
SatI GCNGC 3 cut(s) 158, 681, 869
Sau3AI GATC 8 cut(s) 83, 425, 605, 703, 732, 765, 1186, 1237
Sau96I GGNCC 1 cut(s) 296
ScaI AGTACT 1 cut(s) 969
SchI GAGTC 1 cut(s) 971
ScrFI CCNGG 1 cut(s) 635
SduI GDGCHC 2 cut(s) 540, 1081
SfaNI GCATC 5 cut(s) 4, 571, 922, 1135, 1219
SfuI TTCGAA 1 cut(s) 923
SinI GGWCC 1 cut(s) 296
SmiMI CAYNNNNRTG 1 cut(s) 438
Sse9I AATT 9 cut(s) 272, 484, 760, 828, 949, 1036, 1063, 1116, 1443
SsiI CCGC 2 cut(s) 125, 155
SspI AATATT 1 cut(s) 1321
SspMI CTAG 5 cut(s) 11, 429, 507, 983, 1074
SstI GAGCTC 2 cut(s) 540, 1081
StyD4I CCNGG 1 cut(s) 633
StyI CCWWGG 1 cut(s) 1099
TaaI ACNGT 4 cut(s) 148, 440, 529, 1392
TaiI ACGT 3 cut(s) 102, 856, 1153
TaqI TCGA 5 cut(s) 22, 27, 923, 1081, 1108
TasI AATT 9 cut(s) 272, 484, 760, 828, 949, 1036, 1063, 1116, 1443
TatI WGTACW 1 cut(s) 967
TfiI GAWTC 5 cut(s) 24, 491, 572, 595, 1436
Tru1I TTAA 7 cut(s) 513, 1014, 1119, 1212, 1307, 1497, 1504
Tru9I TTAA 7 cut(s) 513, 1014, 1119, 1212, 1307, 1497, 1504
TscAI CASTG 6 cut(s) 153, 660, 775, 853, 1227, 1247
TseFI GTSAC 4 cut(s) 130, 175, 232, 856
TseI GCWGC 3 cut(s) 157, 680, 868
Tsp45I GTSAC 4 cut(s) 130, 175, 232, 856
TspDTI ATGAA 6 cut(s) 201, 561, 893, 960, 1179, 1275
TspGWI ACGGA 3 cut(s) 218, 314, 875
TspRI CASTG 6 cut(s) 153, 660, 775, 853, 1227, 1247
Van91I CCANNNNNTGG 1 cut(s) 141
VpaK11BI GGWCC 1 cut(s) 296
XapI RAATTY 3 cut(s) 272, 949, 1036
XbaI TCTAGA 3 cut(s) 10, 506, 1073
XceI RCATGY 2 cut(s) 875, 1220
XspI CTAG 5 cut(s) 11, 429, 507, 983, 1074
ZrmI AGTACT 1 cut(s) 969
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.