MD15G1430900.v1.1

COBRA-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0011644
Physical Location & Seq
Reverse (-)
53102973 .. 53105917
2945 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1430900.v1.1.491

Sequence Viewer

Length: 1308 bp
ATGAACCTGCTCTTGGTTTTCATCTTCTCTCTTATCAACTCCTTCGGATTATCATATGGGTATGATCCATTAGATCCATATGCCAACATAACAATCAGATGGGATTTTCTGCAGCAAAGTGGAAGCTCATCTGATATTAAAGTATCGATATACAACTTCCAGCAGTTTCGCCACGTGGACCGGCCCGGTTGGAAGTTGGGTTGGACATGGAAAGGTGATGAAGTGATATGGGACATGTGGGGAGCTGAGGCCATTGAGCAAGGAAACTGCTCCAAGTTCAAGGGTTCACCAGACCTTCCTCATTGCTGTAAAAGGAAGCCGGTGGTTATCGATCTGTTGCCCGGAGCCCCTTTCAACAAGCAGTACTTCAATTGCTGCAAGGGAGGAGAGCTCTCTTCCATGATCCAAGACTCTTCCAAGTTCGGATCTTCTTTTGCGATGAGCGTCGGATCCTTTGCAGGGAAAGACATAGTTATGCCCATCAATTTCACCATTGGACTCCCTGGTTACACCTGCGGCATGCCATTCCAAGTCCAACCGACAAAGTTTAGTCATGATGGTCGTCGATGGAAACAAGTACTCGAGACATGGAATGTGACCTGCATCTACTCCCTGATCAGAGCATCACCTTCTCCAAAGTGCTGTGCTTCCTTGTCTGCGTTCTACAGTAGCACCATTGTTCGGTGCCCCAAGTGCAGCTGTGGATGCCAAGGACTTCCCGGAGTGAAATGCGTGAAGCCAGGTGAAGAATCTCCACCTCTTCTGCAACTTCCGCACACCCATGAGACTGAAGAACCATCACCTTTGGTGACTTGTTCGCGGCACATGTGCCCAATAAGAGTACATTGGCATGTCAAGCAGAGTTACAAGGAGTACTGGAGGGTCAAGATTACAATCTCCAATTACAATTTCGTTAAAAACTATTCTTACTGGACCTTAGTCGTTCAGCACCCGAGTCTGCAAAGCTTGACTCGGCTTTTCAGCTTCAACTACCACCCTCTCAATCAGTATGGAACCATAAATGATACAGGAATGTTTTGGGGAATCAAATACTACAACGACCTGTTACTCACTAGGGGGAAGAATGGGGTCGTGCAGACTGAGATGCTACTGCACAAAGATGCAGGGACTTTCACTTTTAGAGAGGGATGGACTTTTCCTAGGAAAATTTCATTCAACGGGGATGAATGTGTGATGGCCCCTCCGGACGAGTACCCTAGACTTCCCAATGCGGCTCCTAGTGCGACAGCATCAAAGCGTTCCATCGTAGTCTTTGTCTCGCTGTTGATCCTTGCAGCTGTGTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020 GO:0031224 GO:0031225 GO:0044425
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
COBRA

Protein Analysis

436

Amino Acids

49.24

Weight (kDa)

8.85

Isoelectric Point (pI)

46.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COBRA PF04833 47 - 204 1.6e-54 COBRA-like protein
COB_C PF25079 213 - 406 4.5e-45 COBRA family C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011644)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G09790 AT1G09790
fragaria_vesca FvH4_1g08930 FvH4_5g28720
malus_domestica MD08G1239300.v1.1 MD15G1430900.v1.1
prunus_persica Prupe.1G575900_v2.0.a1 Prupe.1G575900_v2.0.a1
pyrus_communis pycom08g20760
rosa_chinensis RchiOBHm_Chr7g0220881
rosa_laevigata RLG00000002195 RLG00000015287
rosa_multiflora Rmu_ssc0000286.1_g000004
rosa_roxburghii Rroxscaffold_3G00238910
rosa_rugosa Rorug07G0198100
rosa_samantha Rh7AG338300 Rh7BG329100 Rh7CG356400 Rh7DG337200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 521
Acc36I ACCTGC 3 cut(s) 15, 521, 608
AccB1I GGYRCC 1 cut(s) 684
AccII CGCG 1 cut(s) 820
AccIII TCCGGA 1 cut(s) 1204
AciI CCGC 4 cut(s) 516, 773, 820, 1232
AclWI GGATC 7 cut(s) 59, 68, 397, 433, 444, 457, 1282
AcsI RAATTY 1 cut(s) 1167
AcuI CTGAAG 1 cut(s) 810
AcvI CACGTG 1 cut(s) 175
AfaI GTAC 5 cut(s) 365, 579, 843, 875, 1214
AfiI CCNNNNNNNGG 3 cut(s) 13, 459, 681
AflIII ACRYGT 2 cut(s) 234, 825
AgsI TTSAA 5 cut(s) 280, 355, 370, 988, 1177
AjnI CCWGG 2 cut(s) 502, 739
AjuI GAANNNNNNNTTGG 3 cut(s) 28, 893, 925
AluBI AGCT 7 cut(s) 126, 245, 391, 699, 966, 984, 1298
AluI AGCT 7 cut(s) 126, 245, 391, 699, 966, 984, 1298
Alw21I GWGCWC 1 cut(s) 393
Alw26I GTCTC 3 cut(s) 578, 779, 1282
AlwI GGATC 7 cut(s) 59, 68, 397, 433, 444, 457, 1282
Ama87I CYCGRG 2 cut(s) 581, 952
Aor13HI TCCGGA 1 cut(s) 1204
AoxI GGCC 3 cut(s) 182, 249, 1197
ApeKI GCWGC 4 cut(s) 112, 375, 696, 1295
ApoI RAATTY 1 cut(s) 1167
AspA2I CCTAGG 1 cut(s) 1160
AspS9I GGNCC 4 cut(s) 178, 183, 933, 1198
AsuC2I CCSGG 3 cut(s) 186, 342, 720
AsuHPI GGTGA 7 cut(s) 227, 279, 481, 618, 755, 792, 820
AvaI CYCGRG 2 cut(s) 581, 952
AvaII GGWCC 2 cut(s) 178, 933
AvrII CCTAGG 1 cut(s) 1160
BaeGI GKGCMC 2 cut(s) 689, 833
BamHI GGATCC 1 cut(s) 449
BanI GGYRCC 1 cut(s) 684
BanII GRGCYC 2 cut(s) 349, 393
BbrPI CACGTG 1 cut(s) 175
Bbv12I GWGCWC 1 cut(s) 393
BbvCI CCTCAGC 1 cut(s) 246
BbvI GCAGC 3 cut(s) 124, 362, 708
BccI CCATC 8 cut(s) 93, 488, 551, 561, 805, 1143, 1189, 1271
BciT130I CCWGG 2 cut(s) 504, 741
BclI TGATCA 1 cut(s) 615
BcnI CCSGG 3 cut(s) 186, 342, 720
BcoDI GTCTC 3 cut(s) 578, 779, 1282
BfaI CTAG 4 cut(s) 1074, 1161, 1218, 1239
BfmI CTRYAG 2 cut(s) 110, 664
BfuAI ACCTGC 3 cut(s) 15, 521, 608
BisI GCNGC 7 cut(s) 113, 376, 517, 697, 821, 1233, 1296
BlnI CCTAGG 1 cut(s) 1160
BlsI GCNGC 7 cut(s) 114, 377, 518, 698, 822, 1234, 1297
BmcAI AGTACT 3 cut(s) 365, 579, 875
Bme1390I CCNGG 5 cut(s) 186, 342, 504, 720, 741
Bme18I GGWCC 2 cut(s) 178, 933
BmeT110I CYCGRG 2 cut(s) 581, 952
BmgT120I GGNCC 4 cut(s) 178, 183, 933, 1198
BmiI GGNNCC 6 cut(s) 346, 451, 686, 1015, 1200, 1236
BmrFI CCNGG 5 cut(s) 186, 342, 504, 720, 741
BmsI GCATC 6 cut(s) 612, 632, 695, 1095, 1111, 1259
BoxI GACNNNNGTC 1 cut(s) 938
BplI GAGNNNNNCTC 2 cut(s) 375, 407
BpmI CTGGAG 1 cut(s) 898
Bpu10I CCTNAGC 1 cut(s) 246
BpuMI CCSGG 3 cut(s) 186, 342, 720
Bsa29I ATCGAT 2 cut(s) 146, 330
BsaAI YACGTR 1 cut(s) 175
BsaBI GATNNNNATC 1 cut(s) 893
BsaJI CCNNGG 3 cut(s) 502, 709, 1160
BsaWI WCCGGW 1 cut(s) 1204
Bsc4I CCNNNNNNNGG 3 cut(s) 13, 459, 681
Bse118I RCCGGY 2 cut(s) 180, 319
Bse1I ACTGG 2 cut(s) 881, 935
Bse3DI GCAATG 1 cut(s) 301
Bse8I GATNNNNATC 1 cut(s) 893
BseAI TCCGGA 1 cut(s) 1204
BseBI CCWGG 2 cut(s) 504, 741
BseCI ATCGAT 2 cut(s) 146, 330
BseDI CCNNGG 3 cut(s) 502, 709, 1160
BseGI GGATG 3 cut(s) 710, 1154, 1189
BseJI GATNNNNATC 1 cut(s) 893
BseLI CCNNNNNNNGG 3 cut(s) 13, 459, 681
BseMI GCAATG 1 cut(s) 301
BseMII CTCAG 2 cut(s) 237, 1092
BseNI ACTGG 2 cut(s) 881, 935
BseRI GAGGAG 1 cut(s) 399
BseSI GKGCMC 2 cut(s) 689, 833
BseXI GCAGC 3 cut(s) 124, 362, 708
BsgI GTGCAG 3 cut(s) 715, 1097, 1115
Bsh1236I CGCG 1 cut(s) 820
BshFI GGCC 3 cut(s) 184, 251, 1199
BshNI GGYRCC 1 cut(s) 684
BshVI ATCGAT 2 cut(s) 146, 330
BsiHKAI GWGCWC 1 cut(s) 393
BsiHKCI CYCGRG 2 cut(s) 581, 952
BsiSI CCGG 6 cut(s) 181, 186, 320, 342, 720, 1205
BslFI GGGAC 2 cut(s) 245, 1141
BslI CCNNNNNNNGG 3 cut(s) 13, 459, 681
BsmAI GTCTC 3 cut(s) 578, 779, 1282
BsmFI GGGAC 2 cut(s) 245, 1141
BsnI GGCC 3 cut(s) 184, 251, 1199
BsoBI CYCGRG 2 cut(s) 581, 952
Bsp1286I GDGCHC 4 cut(s) 349, 393, 689, 833
Bsp13I TCCGGA 1 cut(s) 1204
Bsp143I GATC 8 cut(s) 64, 73, 331, 402, 425, 449, 615, 1287
BspACI CCGC 4 cut(s) 516, 773, 820, 1232
BspANI GGCC 3 cut(s) 184, 251, 1199
BspCNI CTCAG 2 cut(s) 238, 1093
BspDI ATCGAT 2 cut(s) 146, 330
BspEI TCCGGA 1 cut(s) 1204
BspFNI CGCG 1 cut(s) 820
BspHI TCATGA 1 cut(s) 553
BspLI GGNNCC 6 cut(s) 346, 451, 686, 1015, 1200, 1236
BspMAI CTGCAG 1 cut(s) 114
BspMI ACCTGC 3 cut(s) 15, 521, 608
BspPI GGATC 7 cut(s) 59, 68, 397, 433, 444, 457, 1282
BspT107I GGYRCC 1 cut(s) 684
BsrDI GCAATG 1 cut(s) 301
BsrFI RCCGGY 2 cut(s) 180, 319
BsrI ACTGG 2 cut(s) 881, 935
BssAI RCCGGY 2 cut(s) 180, 319
BssECI CCNNGG 3 cut(s) 502, 709, 1160
BssMI GATC 8 cut(s) 64, 73, 331, 402, 425, 449, 615, 1287
BssT1I CCWWGG 2 cut(s) 709, 1160
Bst2UI CCWGG 2 cut(s) 504, 741
Bst4CI ACNGT 1 cut(s) 668
Bst6I CTCTTC 3 cut(s) 400, 418, 765
BstBAI YACGTR 1 cut(s) 175
BstC8I GCNNGC 1 cut(s) 521
BstDEI CTNAG 3 cut(s) 246, 937, 1101
BstF5I GGATG 3 cut(s) 710, 1154, 1189
BstFNI CGCG 1 cut(s) 820
BstKTI GATC 8 cut(s) 67, 76, 334, 405, 428, 452, 618, 1290
BstMAI GTCTC 3 cut(s) 578, 779, 1282
BstMBI GATC 8 cut(s) 64, 73, 331, 402, 425, 449, 615, 1287
BstMWI GCNNNNNNNGC 5 cut(s) 693, 705, 772, 856, 1241
BstNI CCWGG 2 cut(s) 504, 741
BstNSI RCATGY 4 cut(s) 238, 523, 829, 854
BstPAI GACNNNNGTC 1 cut(s) 938
BstSCI CCNGG 5 cut(s) 184, 340, 502, 718, 739
BstSFI CTRYAG 2 cut(s) 110, 664
BstSLI GKGCMC 2 cut(s) 689, 833
BstUI CGCG 1 cut(s) 820
BstV1I GCAGC 3 cut(s) 124, 362, 708
BstX2I RGATCY 3 cut(s) 73, 425, 449
BstYI RGATCY 3 cut(s) 73, 425, 449
Bsu15I ATCGAT 2 cut(s) 146, 330
BsuRI GGCC 3 cut(s) 184, 251, 1199
BsuTUI ATCGAT 2 cut(s) 146, 330
BtgZI GCGATG 1 cut(s) 452
BtsCI GGATG 3 cut(s) 710, 1154, 1189
BveI ACCTGC 3 cut(s) 15, 521, 608
Cac8I GCNNGC 1 cut(s) 521
CciI TCATGA 1 cut(s) 553
Cfr10I RCCGGY 2 cut(s) 180, 319
Cfr13I GGNCC 4 cut(s) 178, 183, 933, 1198
ClaI ATCGAT 2 cut(s) 146, 330
CseI GACGC 1 cut(s) 433
Csp6I GTAC 5 cut(s) 364, 578, 842, 874, 1213
CviAII CATG 9 cut(s) 207, 235, 400, 520, 554, 588, 782, 826, 851
CviQI GTAC 5 cut(s) 364, 578, 842, 874, 1213
DdeI CTNAG 3 cut(s) 246, 937, 1101
DpnI GATC 8 cut(s) 66, 75, 333, 404, 427, 451, 617, 1289
DpnII GATC 8 cut(s) 64, 73, 331, 402, 425, 449, 615, 1287
Eam1104I CTCTTC 3 cut(s) 400, 418, 765
EarI CTCTTC 3 cut(s) 400, 418, 765
Ecl136II GAGCTC 1 cut(s) 391
Eco130I CCWWGG 2 cut(s) 709, 1160
Eco24I GRGCYC 2 cut(s) 349, 393
Eco47I GGWCC 2 cut(s) 178, 933
Eco53kI GAGCTC 1 cut(s) 391
Eco57I CTGAAG 1 cut(s) 810
Eco72I CACGTG 1 cut(s) 175
Eco88I CYCGRG 2 cut(s) 581, 952
EcoICRI GAGCTC 1 cut(s) 391
EcoRII CCWGG 2 cut(s) 502, 739
EcoT14I CCWWGG 2 cut(s) 709, 1160
EcoT38I GRGCYC 2 cut(s) 349, 393
ErhI CCWWGG 2 cut(s) 709, 1160
FaeI CATG 9 cut(s) 210, 238, 403, 523, 557, 591, 785, 829, 854
FalI AAGNNNNNCTT 2 cut(s) 350, 382
FaqI GGGAC 2 cut(s) 245, 1141
FatI CATG 9 cut(s) 206, 234, 399, 519, 553, 587, 781, 825, 850
FauNDI CATATG 2 cut(s) 55, 79
FbaI TGATCA 1 cut(s) 615
Fnu4HI GCNGC 7 cut(s) 113, 376, 517, 697, 821, 1233, 1296
FokI GGATG 3 cut(s) 717, 1161, 1196
FriOI GRGCYC 2 cut(s) 349, 393
Fsp4HI GCNGC 7 cut(s) 113, 376, 517, 697, 821, 1233, 1296
FspBI CTAG 4 cut(s) 1074, 1161, 1218, 1239
GluI GCNGC 7 cut(s) 113, 376, 517, 697, 821, 1233, 1296
GsuI CTGGAG 1 cut(s) 898
HaeIII GGCC 3 cut(s) 184, 251, 1199
HapII CCGG 6 cut(s) 181, 186, 320, 342, 720, 1205
HgaI GACGC 1 cut(s) 433
Hin1II CATG 9 cut(s) 210, 238, 403, 523, 557, 591, 785, 829, 854
HindIII AAGCTT 1 cut(s) 964
HinfI GANTC 6 cut(s) 410, 498, 749, 955, 970, 1044
HpaII CCGG 6 cut(s) 181, 186, 320, 342, 720, 1205
HphI GGTGA 7 cut(s) 227, 279, 481, 618, 755, 792, 820
Hpy166II GTNNAC 2 cut(s) 178, 287
Hpy188I TCNGA 7 cut(s) 47, 98, 133, 425, 449, 620, 1307
Hpy188III TCNNGA 4 cut(s) 554, 583, 886, 1205
Hpy8I GTNNAC 2 cut(s) 178, 287
Hpy99I CGWCG 2 cut(s) 449, 567
HpyAV CCTTC 3 cut(s) 52, 305, 639
HpyCH4III ACNGT 1 cut(s) 668
HpyCH4IV ACGT 1 cut(s) 174
HpyF10VI GCNNNNNNNGC 5 cut(s) 693, 705, 772, 856, 1241
HpyF3I CTNAG 3 cut(s) 246, 937, 1101
HpySE526I ACGT 1 cut(s) 174
Hsp92II CATG 9 cut(s) 210, 238, 403, 523, 557, 591, 785, 829, 854
Kpn2I TCCGGA 1 cut(s) 1204
Ksp22I TGATCA 1 cut(s) 615
Kzo9I GATC 8 cut(s) 64, 73, 331, 402, 425, 449, 615, 1287
LmnI GCTCC 4 cut(s) 242, 275, 344, 1240
Lsp1109I GCAGC 3 cut(s) 124, 362, 708
LweI GCATC 6 cut(s) 612, 632, 695, 1095, 1111, 1259
MaeI CTAG 4 cut(s) 1074, 1161, 1218, 1239
MaeII ACGT 1 cut(s) 174
MaeIII GTNAC 5 cut(s) 506, 595, 808, 863, 1065
MalI GATC 8 cut(s) 66, 75, 333, 404, 427, 451, 617, 1289
MboI GATC 8 cut(s) 64, 73, 331, 402, 425, 449, 615, 1287
MboII GAAGA 8 cut(s) 16, 387, 405, 420, 752, 758, 803, 1093
MfeI CAATTG 1 cut(s) 370
MflI RGATCY 3 cut(s) 73, 425, 449
MhlI GDGCHC 4 cut(s) 349, 393, 689, 833
MluCI AATT 5 cut(s) 370, 484, 901, 907, 1167
MlyI GAGTC 4 cut(s) 404, 492, 964, 964
MmeI TCCRAC 4 cut(s) 170, 182, 427, 559
MnlI CCTC 8 cut(s) 241, 309, 377, 768, 873, 1008, 1138, 1212
MroI TCCGGA 1 cut(s) 1204
MseI TTAA 2 cut(s) 138, 915
MslI CAYNNNNRTG 4 cut(s) 473, 780, 849, 1119
MspA1I CMGCKG 2 cut(s) 699, 1298
MspI CCGG 6 cut(s) 181, 186, 320, 342, 720, 1205
MspR9I CCNGG 5 cut(s) 186, 342, 504, 720, 741
MunI CAATTG 1 cut(s) 370
MvaI CCWGG 2 cut(s) 504, 741
MvnI CGCG 1 cut(s) 820
MwoI GCNNNNNNNGC 5 cut(s) 693, 705, 772, 856, 1241
NciI CCSGG 3 cut(s) 186, 342, 720
NdeI CATATG 2 cut(s) 55, 79
NdeII GATC 8 cut(s) 64, 73, 331, 402, 425, 449, 615, 1287
NlaIII CATG 9 cut(s) 210, 238, 403, 523, 557, 591, 785, 829, 854
NlaIV GGNNCC 6 cut(s) 346, 451, 686, 1015, 1200, 1236
NmeAIII GCCGAG 1 cut(s) 952
NmuCI GTSAC 2 cut(s) 595, 808
NspI RCATGY 4 cut(s) 238, 523, 829, 854
PaeI GCATGC 1 cut(s) 523
PaeR7I CTCGAG 1 cut(s) 581
PagI TCATGA 1 cut(s) 553
PaqCI CACCTGC 1 cut(s) 521
PciI ACATGT 2 cut(s) 234, 825
PfeI GAWTC 2 cut(s) 749, 1044
PfoI TCCNGGA 1 cut(s) 718
PkrI GCNGC 7 cut(s) 114, 377, 518, 698, 822, 1234, 1297
PleI GAGTC 4 cut(s) 404, 492, 963, 964
PmaCI CACGTG 1 cut(s) 175
PmlI CACGTG 1 cut(s) 175
PpsI GAGTC 4 cut(s) 404, 492, 963, 964
Ppu21I YACGTR 1 cut(s) 175
PscI ACATGT 2 cut(s) 234, 825
PshAI GACNNNNGTC 1 cut(s) 938
Psp124BI GAGCTC 1 cut(s) 393
Psp6I CCWGG 2 cut(s) 502, 739
PspCI CACGTG 1 cut(s) 175
PspGI CCWGG 2 cut(s) 502, 739
PspN4I GGNNCC 6 cut(s) 346, 451, 686, 1015, 1200, 1236
PspPI GGNCC 4 cut(s) 178, 183, 933, 1198
PstI CTGCAG 1 cut(s) 114
PsuI RGATCY 3 cut(s) 73, 425, 449
PvuII CAGCTG 2 cut(s) 699, 1298
RsaI GTAC 5 cut(s) 365, 579, 843, 875, 1214
RsaNI GTAC 5 cut(s) 364, 578, 842, 874, 1213
RseI CAYNNNNRTG 4 cut(s) 473, 780, 849, 1119
SacI GAGCTC 1 cut(s) 393
SaqAI TTAA 2 cut(s) 138, 915
SatI GCNGC 7 cut(s) 113, 376, 517, 697, 821, 1233, 1296
Sau3AI GATC 8 cut(s) 64, 73, 331, 402, 425, 449, 615, 1287
Sau96I GGNCC 4 cut(s) 178, 183, 933, 1198
ScaI AGTACT 3 cut(s) 365, 579, 875
SchI GAGTC 4 cut(s) 404, 492, 964, 964
ScrFI CCNGG 5 cut(s) 186, 342, 504, 720, 741
SduI GDGCHC 4 cut(s) 349, 393, 689, 833
SfaNI GCATC 6 cut(s) 612, 632, 695, 1095, 1111, 1259
SfcI CTRYAG 2 cut(s) 110, 664
Sfr274I CTCGAG 1 cut(s) 581
SinI GGWCC 2 cut(s) 178, 933
SlaI CTCGAG 1 cut(s) 581
SmiMI CAYNNNNRTG 4 cut(s) 473, 780, 849, 1119
SmlI CTYRAG 1 cut(s) 581
SmoI CTYRAG 1 cut(s) 581
SphI GCATGC 1 cut(s) 523
Sse9I AATT 5 cut(s) 370, 484, 901, 907, 1167
SsiI CCGC 4 cut(s) 516, 773, 820, 1232
SspMI CTAG 4 cut(s) 1074, 1161, 1218, 1239
SstI GAGCTC 1 cut(s) 393
StyD4I CCNGG 5 cut(s) 184, 340, 502, 718, 739
StyI CCWWGG 2 cut(s) 709, 1160
TaaI ACNGT 1 cut(s) 668
TaiI ACGT 1 cut(s) 177
TaqI TCGA 4 cut(s) 146, 330, 565, 582
TasI AATT 5 cut(s) 370, 484, 901, 907, 1167
TatI WGTACW 4 cut(s) 363, 577, 841, 873
TauI GCSGC 3 cut(s) 519, 823, 1235
TfiI GAWTC 2 cut(s) 749, 1044
Tru1I TTAA 2 cut(s) 138, 915
Tru9I TTAA 2 cut(s) 138, 915
TseFI GTSAC 2 cut(s) 595, 808
TseI GCWGC 4 cut(s) 112, 375, 696, 1295
Tsp45I GTSAC 2 cut(s) 595, 808
TspDTI ATGAA 5 cut(s) 10, 17, 234, 1161, 1200
VpaK11BI GGWCC 2 cut(s) 178, 933
XapI RAATTY 1 cut(s) 1167
XceI RCATGY 4 cut(s) 238, 523, 829, 854
XhoI CTCGAG 1 cut(s) 581
XmaJI CCTAGG 1 cut(s) 1160
XspI CTAG 4 cut(s) 1074, 1161, 1218, 1239
ZrmI AGTACT 3 cut(s) 365, 579, 875
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.