MD15G1437800.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
53759774 .. 53766825
7052 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1437800.v1.1.491

Sequence Viewer

Length: 1269 bp
ATGGCATCTGCTAGCCTAGGGAATGGTGGAGTTGGCAGTTCAAGGTCTGTGAATGGCTTCAAGGGTTCGTCTAGTTCGGTTGATTGGCTGGGGAGGGAGATGCTCGAGATGAGCTTGCGGGACAAGCCGGATCGCGATGACGATAGAGATAGCGAACCGGATGTAATTGATGGAGTGGGTGCTGAAACAGGACGTGTAATACGAACGACTGTTGGTGGTCGGAGTGGTCAATCTAGGCAGACAGTAAGCTATATTTCAGAACATGTGGTTGGAACTGGTTCTTTTGGGGTTGTTTTCCAGGCGAAATGTAGAGAAACTGGAGAGATTGTTGCTATCAAGAAGGTGCTCCAAGACAAGCGCTACAAGAACAGGGAGTTACAGATTATGCAGATGTTGGATCATCCAAACATTGTTGCCCTAAAGCATTGCTTCTTCTCAACCACAGACAAAGAAGAGGTTTACTTGAACCTTGTACTTGAATTTGTTCCTGAAACGGTTAACCGCATTGCGAGGAACTATAGTAGGATCAGCCAGCGAATGCCCATAACATATGTTAAACTTTATACCTATCAGATATGCAGGGCACTTGCTTATATACATAATTGTATTGGAATCTGTCACCGTGATATCAAGCCTCAGAACTTACTTGTGAATCCACACACGCATCAGCTGAAACTTTGTGATTTTGGGAGTGCAAAAGTGTTGGTGAAAGGAGAACCAAATGTTTCTTACATCTGCTCAAGATATTATCGTGCTCCAGAATTGATATTTGGTGCCACTGAGTACACAACAGCTATTGATATATGGTCTACAGGTTGTGTGATGGCTGAATTACTTCTTGGCCAGCCCTTGTTTCCTGGCGAAAGTGGAGTGGACCAACTAGTTGAGATAATTAAGGTTTTGGGGACTCCAACCAGGGAGGAGATAAAGTGCATGAATCCAAACTATACTGAATTTAAATTCCCACAGATAAAGCCTCATCCGTGGCACAAGGTATTCCAAAAACGCTTACCCCCAGAGGCAGTAGATCTTGTTTGTAGGTTTTTCCAGTATTCCCCGAACCTGCGATGTACTGCTTTGGAAGCTTGCATTCACCCTTTCTTTGATGAATTGAGAGACCCAAATACTCGTCTTCCTAATGGTCGCCCTCTTCCTCCTCTATTTAACTTTAACGCCCAGGAGCTTCAAGGAATTCCAACCGACATAGTCAACCGACTTATTCCAGAGCATGCCCGTAAGCAGAACTTATTCATGGCTTTGCACGCCTAG

Protein Analysis

423

Amino Acids

47.72

Weight (kDa)

8.37

Isoelectric Point (pI)

35.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 85 - 368 3e-62 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 88 - 286 1e-24 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1071
AccB1I GGYRCC 1 cut(s) 773
AccI GTMKAC 1 cut(s) 809
AccII CGCG 1 cut(s) 135
AciI CCGC 2 cut(s) 118, 502
AclWI GGATC 3 cut(s) 138, 405, 533
AcoI YGGCCR 1 cut(s) 841
AcsI RAATTY 4 cut(s) 479, 953, 959, 1191
AfaI GTAC 3 cut(s) 474, 785, 1072
AfeI AGCGCT 1 cut(s) 359
AflIII ACRYGT 2 cut(s) 193, 262
AgsI TTSAA 5 cut(s) 42, 61, 466, 479, 1187
AhlI ACTAGT 1 cut(s) 880
AjiI CACGTC 1 cut(s) 194
AjnI CCWGG 4 cut(s) 297, 856, 914, 1176
AjuI GAANNNNNNNTTGG 6 cut(s) 252, 284, 753, 785, 822, 854
AluBI AGCT 6 cut(s) 114, 249, 670, 794, 1085, 1183
AluI AGCT 6 cut(s) 114, 249, 670, 794, 1085, 1183
Alw21I GWGCWC 2 cut(s) 348, 757
Alw26I GTCTC 1 cut(s) 1110
AlwI GGATC 3 cut(s) 138, 405, 533
Ama87I CYCGRG 1 cut(s) 104
Aor51HI AGCGCT 1 cut(s) 359
AoxI GGCC 1 cut(s) 841
ApoI RAATTY 4 cut(s) 479, 953, 959, 1191
Asp700I GAANNNNTTC 5 cut(s) 56, 277, 483, 834, 1247
AspA2I CCTAGG 1 cut(s) 16
AspLEI GCGC 1 cut(s) 360
AspS9I GGNCC 1 cut(s) 874
AsuHPI GGTGA 3 cut(s) 611, 718, 1085
AsuNHI GCTAGC 1 cut(s) 11
AvaI CYCGRG 1 cut(s) 104
AvaII GGWCC 1 cut(s) 874
AvrII CCTAGG 1 cut(s) 16
BaeGI GKGCMC 1 cut(s) 586
BalI TGGCCA 1 cut(s) 843
BanI GGYRCC 1 cut(s) 773
BbsI GAAGAC 1 cut(s) 1124
Bbv12I GWGCWC 2 cut(s) 348, 757
BccI CCATC 2 cut(s) 164, 817
BciT130I CCWGG 4 cut(s) 299, 858, 916, 1178
BcoDI GTCTC 1 cut(s) 1110
BcuI ACTAGT 1 cut(s) 880
BfaI CTAG 6 cut(s) 12, 17, 72, 234, 881, 1267
BfmI CTRYAG 2 cut(s) 517, 810
BfoI RGCGCY 1 cut(s) 361
BfuAI ACCTGC 1 cut(s) 1071
BglII AGATCT 1 cut(s) 1027
BlnI CCTAGG 1 cut(s) 16
Bme1390I CCNGG 4 cut(s) 299, 858, 916, 1178
Bme18I GGWCC 1 cut(s) 874
BmeT110I CYCGRG 1 cut(s) 104
BmgBI CACGTC 1 cut(s) 194
BmgT120I GGNCC 1 cut(s) 874
BmiI GGNNCC 1 cut(s) 775
BmrFI CCNGG 4 cut(s) 299, 858, 916, 1178
BmsI GCATC 3 cut(s) 14, 90, 673
BmtI GCTAGC 1 cut(s) 15
BpiI GAAGAC 1 cut(s) 1124
BpmI CTGGAG 2 cut(s) 339, 741
BpuEI CTTGAG 1 cut(s) 724
BsaI GGTCTC 1 cut(s) 1110
BsaJI CCNNGG 4 cut(s) 16, 915, 983, 1176
BsaWI WCCGGW 1 cut(s) 157
BsaXI ACNNNNNCTCC 4 cut(s) 312, 342, 914, 944
Bse1I ACTGG 3 cut(s) 280, 322, 1048
Bse3DI GCAATG 2 cut(s) 424, 504
BseBI CCWGG 4 cut(s) 299, 858, 916, 1178
BseDI CCNNGG 4 cut(s) 16, 915, 983, 1176
BseGI GGATG 3 cut(s) 166, 400, 979
BseMI GCAATG 2 cut(s) 424, 504
BseMII CTCAG 2 cut(s) 650, 771
BseNI ACTGG 3 cut(s) 280, 322, 1048
BseRI GAGGAG 2 cut(s) 935, 1146
BseSI GKGCMC 1 cut(s) 586
BseYI CCCAGC 1 cut(s) 88
Bsh1236I CGCG 1 cut(s) 135
BshFI GGCC 1 cut(s) 843
BshNI GGYRCC 1 cut(s) 773
BsiHKAI GWGCWC 2 cut(s) 348, 757
BsiHKCI CYCGRG 1 cut(s) 104
BsiSI CCGG 2 cut(s) 128, 158
BslFI GGGAC 2 cut(s) 134, 919
BsmAI GTCTC 1 cut(s) 1110
BsmFI GGGAC 2 cut(s) 134, 919
BsmI GAATGC 2 cut(s) 543, 1089
BsnI GGCC 1 cut(s) 843
Bso31I GGTCTC 1 cut(s) 1110
BsoBI CYCGRG 1 cut(s) 104
Bsp1286I GDGCHC 3 cut(s) 348, 586, 757
Bsp143I GATC 4 cut(s) 130, 397, 525, 1027
Bsp68I TCGCGA 1 cut(s) 135
BspACI CCGC 2 cut(s) 118, 502
BspANI GGCC 1 cut(s) 843
BspCNI CTCAG 2 cut(s) 649, 772
BspFNI CGCG 1 cut(s) 135
BspLI GGNNCC 1 cut(s) 775
BspMI ACCTGC 1 cut(s) 1071
BspOI GCTAGC 1 cut(s) 15
BspPI GGATC 3 cut(s) 138, 405, 533
BspT107I GGYRCC 1 cut(s) 773
BspTNI GGTCTC 1 cut(s) 1110
BsrDI GCAATG 2 cut(s) 424, 504
BsrI ACTGG 3 cut(s) 280, 322, 1048
BssECI CCNNGG 4 cut(s) 16, 915, 983, 1176
BssMI GATC 4 cut(s) 130, 397, 525, 1027
BssT1I CCWWGG 1 cut(s) 16
Bst2UI CCWGG 4 cut(s) 299, 858, 916, 1178
Bst4CI ACNGT 4 cut(s) 211, 244, 496, 623
Bst6I CTCTTC 2 cut(s) 447, 1155
BstC8I GCNNGC 7 cut(s) 13, 116, 533, 845, 1087, 1230, 1263
BstDEI CTNAG 2 cut(s) 636, 780
BstDSI CCRYGG 1 cut(s) 983
BstF5I GGATG 3 cut(s) 166, 400, 979
BstFNI CGCG 1 cut(s) 135
BstH2I RGCGCY 1 cut(s) 361
BstHHI GCGC 1 cut(s) 360
BstKTI GATC 4 cut(s) 133, 400, 528, 1030
BstMAI GTCTC 1 cut(s) 1110
BstMBI GATC 4 cut(s) 130, 397, 525, 1027
BstMWI GCNNNNNNNGC 3 cut(s) 124, 1082, 1262
BstNI CCWGG 4 cut(s) 299, 858, 916, 1178
BstNSI RCATGY 2 cut(s) 266, 1232
BstSCI CCNGG 4 cut(s) 297, 856, 914, 1176
BstSFI CTRYAG 2 cut(s) 517, 810
BstSLI GKGCMC 1 cut(s) 586
BstUI CGCG 1 cut(s) 135
BstV2I GAAGAC 1 cut(s) 1124
BstX2I RGATCY 1 cut(s) 1027
BstYI RGATCY 1 cut(s) 1027
BsuRI GGCC 1 cut(s) 843
BtgI CCRYGG 1 cut(s) 983
BtgZI GCGATG 2 cut(s) 150, 1081
BtrI CACGTC 1 cut(s) 194
BtsCI GGATG 3 cut(s) 166, 400, 979
BtsIMutI CAGTG 1 cut(s) 777
BtuMI TCGCGA 1 cut(s) 135
BveI ACCTGC 1 cut(s) 1071
Cac8I GCNNGC 7 cut(s) 13, 116, 533, 845, 1087, 1230, 1263
CfoI GCGC 1 cut(s) 360
Cfr13I GGNCC 1 cut(s) 874
Csp6I GTAC 3 cut(s) 473, 784, 1071
CviAII CATG 4 cut(s) 263, 934, 1229, 1252
CviQI GTAC 3 cut(s) 473, 784, 1071
DdeI CTNAG 2 cut(s) 636, 780
DpnI GATC 4 cut(s) 132, 399, 527, 1029
DpnII GATC 4 cut(s) 130, 397, 525, 1027
DraI TTTAAA 1 cut(s) 958
EaeI YGGCCR 1 cut(s) 841
Eam1104I CTCTTC 2 cut(s) 447, 1155
EarI CTCTTC 2 cut(s) 447, 1155
Eco130I CCWWGG 1 cut(s) 16
Eco31I GGTCTC 1 cut(s) 1110
Eco32I GATATC 1 cut(s) 628
Eco47I GGWCC 1 cut(s) 874
Eco47III AGCGCT 1 cut(s) 359
Eco88I CYCGRG 1 cut(s) 104
EcoRI GAATTC 1 cut(s) 1191
EcoRII CCWGG 4 cut(s) 297, 856, 914, 1176
EcoRV GATATC 1 cut(s) 628
EcoT14I CCWWGG 1 cut(s) 16
ErhI CCWWGG 1 cut(s) 16
FaeI CATG 4 cut(s) 266, 937, 1232, 1255
FalI AAGNNNNNCTT 4 cut(s) 413, 445, 1229, 1261
FaqI GGGAC 2 cut(s) 134, 919
FatI CATG 4 cut(s) 262, 933, 1228, 1251
FauI CCCGC 1 cut(s) 111
FauNDI CATATG 1 cut(s) 550
FblI GTMKAC 1 cut(s) 809
FokI GGATG 3 cut(s) 173, 387, 966
FspBI CTAG 6 cut(s) 12, 17, 72, 234, 881, 1267
GlaI GCGC 1 cut(s) 359
GsaI CCCAGC 1 cut(s) 92
GsuI CTGGAG 2 cut(s) 339, 741
HaeII RGCGCY 1 cut(s) 361
HaeIII GGCC 1 cut(s) 843
HapII CCGG 2 cut(s) 128, 158
HhaI GCGC 1 cut(s) 360
Hin1II CATG 4 cut(s) 266, 937, 1232, 1255
Hin6I GCGC 1 cut(s) 358
HinP1I GCGC 1 cut(s) 358
HincII GTYRAC 2 cut(s) 499, 1210
HindII GTYRAC 2 cut(s) 499, 1210
HindIII AAGCTT 1 cut(s) 1083
HinfI GANTC 4 cut(s) 612, 652, 907, 937
HpaI GTTAAC 1 cut(s) 499
HpaII CCGG 2 cut(s) 128, 158
HphI GGTGA 3 cut(s) 611, 718, 1085
Hpy166II GTNNAC 6 cut(s) 460, 499, 786, 810, 874, 1210
Hpy188I TCNGA 4 cut(s) 222, 259, 573, 639
Hpy188III TCNNGA 7 cut(s) 106, 134, 337, 488, 741, 758, 1223
Hpy8I GTNNAC 6 cut(s) 460, 499, 786, 810, 874, 1210
HpyAV CCTTC 1 cut(s) 334
HpyCH4III ACNGT 4 cut(s) 211, 244, 496, 623
HpyCH4IV ACGT 1 cut(s) 193
HpyCH4V TGCA 6 cut(s) 388, 579, 695, 933, 1089, 1261
HpyF10VI GCNNNNNNNGC 3 cut(s) 124, 1082, 1262
HpyF3I CTNAG 2 cut(s) 636, 780
HpySE526I ACGT 1 cut(s) 193
Hsp92II CATG 4 cut(s) 266, 937, 1232, 1255
HspAI GCGC 1 cut(s) 358
KspAI GTTAAC 1 cut(s) 499
Kzo9I GATC 4 cut(s) 130, 397, 525, 1027
LmnI GCTCC 3 cut(s) 351, 760, 1180
LweI GCATC 3 cut(s) 14, 90, 673
MaeI CTAG 6 cut(s) 12, 17, 72, 234, 881, 1267
MaeII ACGT 1 cut(s) 193
MaeIII GTNAC 2 cut(s) 375, 617
MalI GATC 4 cut(s) 132, 399, 527, 1029
MboI GATC 4 cut(s) 130, 397, 525, 1027
MboII GAAGA 4 cut(s) 424, 464, 1124, 1142
MflI RGATCY 1 cut(s) 1027
MhlI GDGCHC 3 cut(s) 348, 586, 757
MlsI TGGCCA 1 cut(s) 843
MluNI TGGCCA 1 cut(s) 843
MlyI GAGTC 1 cut(s) 901
MmeI TCCRAC 5 cut(s) 200, 250, 375, 935, 1220
Mox20I TGGCCA 1 cut(s) 843
MroXI GAANNNNTTC 5 cut(s) 56, 277, 483, 834, 1247
MscI TGGCCA 1 cut(s) 843
MseI TTAA 6 cut(s) 498, 555, 894, 957, 1164, 1170
Msp20I TGGCCA 1 cut(s) 843
MspA1I CMGCKG 1 cut(s) 670
MspI CCGG 2 cut(s) 128, 158
MspR9I CCNGG 4 cut(s) 299, 858, 916, 1178
Mva1269I GAATGC 2 cut(s) 543, 1089
MvaI CCWGG 4 cut(s) 299, 858, 916, 1178
MvnI CGCG 1 cut(s) 135
MwoI GCNNNNNNNGC 3 cut(s) 124, 1082, 1262
NdeI CATATG 1 cut(s) 550
NdeII GATC 4 cut(s) 130, 397, 525, 1027
NheI GCTAGC 1 cut(s) 11
NlaIII CATG 4 cut(s) 266, 937, 1232, 1255
NlaIV GGNNCC 1 cut(s) 775
NmuCI GTSAC 1 cut(s) 617
NruI TCGCGA 1 cut(s) 135
NspI RCATGY 2 cut(s) 266, 1232
PaeI GCATGC 1 cut(s) 1232
PaeR7I CTCGAG 1 cut(s) 104
PciI ACATGT 1 cut(s) 262
PcsI WCGNNNNNNNCGW 1 cut(s) 199
PctI GAATGC 2 cut(s) 543, 1089
PdmI GAANNNNTTC 5 cut(s) 56, 277, 483, 834, 1247
PfeI GAWTC 3 cut(s) 612, 652, 937
PflFI GACNNNGTC 1 cut(s) 1205
PleI GAGTC 1 cut(s) 901
PpsI GAGTC 1 cut(s) 901
PscI ACATGT 1 cut(s) 262
Psp6I CCWGG 4 cut(s) 297, 856, 914, 1176
PspFI CCCAGC 1 cut(s) 88
PspGI CCWGG 4 cut(s) 297, 856, 914, 1176
PspN4I GGNNCC 1 cut(s) 775
PspPI GGNCC 1 cut(s) 874
PsuI RGATCY 1 cut(s) 1027
PsyI GACNNNGTC 1 cut(s) 1205
PvuII CAGCTG 1 cut(s) 670
RruI TCGCGA 1 cut(s) 135
RsaI GTAC 3 cut(s) 474, 785, 1072
RsaNI GTAC 3 cut(s) 473, 784, 1071
SaqAI TTAA 6 cut(s) 498, 555, 894, 957, 1164, 1170
Sau3AI GATC 4 cut(s) 130, 397, 525, 1027
Sau96I GGNCC 1 cut(s) 874
SchI GAGTC 1 cut(s) 901
ScrFI CCNGG 4 cut(s) 299, 858, 916, 1178
SduI GDGCHC 3 cut(s) 348, 586, 757
SfaNI GCATC 3 cut(s) 14, 90, 673
SfcI CTRYAG 2 cut(s) 517, 810
Sfr274I CTCGAG 1 cut(s) 104
SinI GGWCC 1 cut(s) 874
SlaI CTCGAG 1 cut(s) 104
SmiI ATTTAAAT 1 cut(s) 958
SmlI CTYRAG 2 cut(s) 104, 739
SmoI CTYRAG 2 cut(s) 104, 739
SpeI ACTAGT 1 cut(s) 880
SphI GCATGC 1 cut(s) 1232
SsiI CCGC 2 cut(s) 118, 502
SspMI CTAG 6 cut(s) 12, 17, 72, 234, 881, 1267
StyD4I CCNGG 4 cut(s) 297, 856, 914, 1176
StyI CCWWGG 1 cut(s) 16
SwaI ATTTAAAT 1 cut(s) 958
TaaI ACNGT 4 cut(s) 211, 244, 496, 623
TaiI ACGT 1 cut(s) 196
TaqI TCGA 1 cut(s) 105
TatI WGTACW 3 cut(s) 472, 783, 1070
TfiI GAWTC 3 cut(s) 612, 652, 937
Tru1I TTAA 6 cut(s) 498, 555, 894, 957, 1164, 1170
Tru9I TTAA 6 cut(s) 498, 555, 894, 957, 1164, 1170
TscAI CASTG 1 cut(s) 784
TseFI GTSAC 1 cut(s) 617
Tsp45I GTSAC 1 cut(s) 617
TspDTI ATGAA 3 cut(s) 950, 1122, 1240
TspGWI ACGGA 1 cut(s) 972
TspRI CASTG 1 cut(s) 784
Tth111I GACNNNGTC 1 cut(s) 1205
VpaK11BI GGWCC 1 cut(s) 874
XapI RAATTY 4 cut(s) 479, 953, 959, 1191
XceI RCATGY 2 cut(s) 266, 1232
XhoI CTCGAG 1 cut(s) 104
XmaJI CCTAGG 1 cut(s) 16
XmiI GTMKAC 1 cut(s) 809
XmnI GAANNNNTTC 5 cut(s) 56, 277, 483, 834, 1247
XspI CTAG 6 cut(s) 12, 17, 72, 234, 881, 1267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.