Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0011751

Physical Location & Seq

Genomic Coordinates Forward (+)

3627571 .. 3632983

Gene Structure 5413 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1050800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2463 bp

ATGTCACAAAGGGCTTCGTTAGAACACTCACAAGGAGAACTAGAGCCTCTTCATCATCCTTCTCTCTCAGAACTAGAAACTCTACGAGAAAAAATGGTGAAGTTCTCCAAGCAATTTGAAGGGCAGCTCGTCCCTGAATGGAAGGATGCATTCGTCGATTACTGGCAGCTTAAGAAGGACCTCAAAAAAATCCATCTCCTCAACTCTAACAACAACAAAAACTCACCTACTAGGCACCAAAGTAGCCCCTCTTTATCCAACACCCTCTTCACTTCTATAAGGAAGTTCTCTCCATTTGGCCATCCACATAGAGAACATGACCTCATACATGTTCACAAGAAGCTTGCCTCATCCGCAAGCAAGGAAGACATGTATGAGACTGAATTGTTAGAACAATTCGCCGATACTGATGCTGCGAAAGAGTTTTTCGCATGCCTCGACCTTCAGCTGAACAAGGTGAATCAGTTTTTCAAAACAAAGGAGAAAGAGTTCGTGGAGAGAGGGGAGTCCTTGAGGAAACAAATGGATATACTCATTGAGCTCAAAACCGCCTTCAAGAAACAGCGCGGTAAAGGAGCTTTTGCACTGAACTCCAAGGAGGATATCTCCATGTCATGCTCCTTCTCGTCTGATGAGGACTCTGTTAAGGGCAAAACAGAGCAAGAACAGCCGCAAGACAGCACAGATGACTTGGAGAAAAATGAAGCGGCATACTCGGAAGGAGGCGAATTGGGAAAATCAATGAGAACGAAAAGTGAAGATATTGGGAAGCTAAGGAGCATGTCAAGTCGTTCTTTCAGCTTCCAAGGGAAGAACTTGAAGATAAACATTCCTCTAACAAATCCATCGCGTACTTTCTCAGCGATCAGTTACGTAGTTTGGGAAGACCTGGTGAATCAGTCCTCGAGGAAATGCGGTGCAGACGGAGGTAAGCTGCACATCAACAAAACCAAGTTGCATCATGCGGACAAGATGATCCGAGGCGCTTTCGTTGAGCTCTATAAGGGGCTGGGATATCTGAAAACTTACAGGAACTTGAACATGCTTGCTTTTATAAAGATTTTAAAGAAGTTTGACAAAGTCACTGGAAAACAAGTGCTTCCAATTTACCTAAAAGTTGTGGAGAGTTCCTACTTCAACAGCTCCGATAAGGTGATGAACTTAGGAGATGAAGTTGAGGAGCTTTTCATCAAACACTTTGCCGAAGAAGACCGACGAAAGGCCATGAAATACCTTAAACCGACGCAGCGCAAAGAATCACACTCCATAACGTTCTTCATTGGTTTATTCACGGGATGCTTTATTGCGCTCTTAACCGGATACGTCGTTATGGCTCATATCACGGGATTGTACAGACGGCAGCCAAAATCGGTCTATATGGAAACTGCCTACCCTGTACTTAGCATGTTCAGCCTACTGTTTCTACACTTCTTCTTGTACGGTTGCAACATTTTCGCGTGGAGAAAGGCGCGTATAAATTACAGTTTCATCTTCGAATTGTCCCAGACGAAGGAGCTAAAGTATCGAGATGTGTTCTTGATCTGCACCATGTCGTTGACTACTGTGGTGGGAGTCATGTGTGTTCATTTGTTACTGCTAACAAAAGGCTACTCATATGCCCAAGTTCAAGCAATCCCTGGCCTTCTTTTACTGACGTTTCTCCTGTTACTTGTATGCCCCTTCAACATCATTTACCAATCAAGCCGCTTCCGCCTTCTTCGTGTGATAAGAAATATCATTCTGTCACCTCTGTACAAGGTCGTCATGCTGGACTTCTTCATGGCAGATCAACTTTGTAGTCAGGTACCGATGCTTAGGAATCTCGAGTATGTGGCATGTTACTACATAACTGGAAGCTACAAAACTCAGGACTATGGCTACTGCATGAGGGCAGGGCACTACCTAGATCTTGCTTATGCCGTGTCCTTCCTACCCTATTACTGGAGAGCAATGCAGTGCGCTCGGCGGTGGTTTGATGAGGGTCAGACAAGCCACCTGGTGAATCTAGGCAAATATGTGTCAGCAATGTTAGCAGCCGGAGCTAAAGTAGCTTATGAGAAAGAACGGAGCATCGGATGGCTCTGTCTTGTTGTGATCATGTCGACTTTTGCAACAGTTTACCAATTGTATTGGGACTTTGTAAAGGATTGGGGTTTGCTACAAATGAATTCCAAGAATCCTTTGCTTAGGAACGAATTAATGATTCGCCGAAAGTTCATATACTACATCTCAATGGGATTGAACCTTTTTCTCAGGCTAGCTTGGTTGCAAACTGTTCTCCATTCAAGTTTTGGACATGTGGACTACCGAGTAACCGGGCTGTTTTTAGCTGCTCTTGAAGTCATCAGAAGAGGGTTGTGGAATTTTTTCAGGTTGGAGAATGAGCATCTAAATAATGCAGGCAAGTTTAGAGCAGTTAAGACTGTACCACTGCCTTTTCATGAAGTGGATGAACAAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0006950 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0012505 GO:0015698 GO:0016020 GO:0016036 GO:0031667 GO:0031668 GO:0031669 GO:0031984 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0071496 GO:0071944 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

821

Amino Acids

95.03

Weight (kDa)

9.22

Isoelectric Point (pI)

43.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	33 - 374	1.1e-67	SPX domain
EXS	PF03124	464 - 797	1.1e-97	EXS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011751)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68740 AT1G68740
fragaria_vesca	FvH4_4g28410
malus_domestica	MD13G1049800.v1.1 MD16G1050800.v1.1
prunus_persica	Prupe.1G301900_v2.0.a1
pyrus_communis	pycom13g04410 pycom13g04420 pycom16g04450
rosa_chinensis	RchiOBHm_Chr4g0436361
rosa_laevigata	RLG00000006525
rosa_multiflora	Rmu_sc0006449.1_g000007
rosa_roxburghii	Rroxscaffold_5G00377530
rosa_rugosa	Rorug04G0293300
rosa_samantha	Rh4AG347500 Rh4BG356300 Rh4CG370900 Rh4DG350000
rosa_wichuraiana	Rw4G030380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1055
AbsI	CCTCGAGG	1 cut(s)	904
Acc65I	GGTACC	1 cut(s)	1804
AccB1I	GGYRCC	2 cut(s)	234, 1804
AccI	GTMKAC	1 cut(s)	2102
AccII	CGCG	4 cut(s)	567, 850, 1457, 1471
AclI	AACGTT	1 cut(s)	1271
AclWI	GGATC	1 cut(s)	970
AcoI	YGGCCR	1 cut(s)	298
AcsI	RAATTY	2 cut(s)	2167, 2362
AcuI	CTGAAG	1 cut(s)	428
AdeI	CACNNNGTG	1 cut(s)	1999
AfaI	GTAC	7 cut(s)	853, 1352, 1398, 1439, 1754, 1806, 2427
AfiI	CCNNNNNNNGG	3 cut(s)	1219, 1510, 1941
AflII	CTTAAG	1 cut(s)	170
AflIII	ACRYGT	3 cut(s)	328, 369, 2296
AjnI	CCWGG	3 cut(s)	888, 1636, 1995
AjuI	GAANNNNNNNTTGG	2 cut(s)	251, 283
AloI	GAACNNNNNNTCC	2 cut(s)	473, 505
Alw21I	GWGCWC	2 cut(s)	543, 999
Alw26I	GTCTC	1 cut(s)	371
AlwI	GGATC	1 cut(s)	970
Ama87I	CYCGRG	2 cut(s)	904, 1823
AoxI	GGCC	3 cut(s)	298, 1221, 1639
ApeKI	GCWGC	8 cut(s)	124, 166, 413, 934, 1246, 1360, 2033, 2330
ApoI	RAATTY	2 cut(s)	2167, 2362
AseI	ATTAAT	1 cut(s)	2198
Asp700I	GAANNNNTTC	2 cut(s)	488, 2366
Asp718I	GGTACC	1 cut(s)	1804
AspLEI	GCGC	6 cut(s)	567, 986, 1251, 1309, 1471, 1961
AspS9I	GGNCC	1 cut(s)	178
AsuC2I	CCSGG	1 cut(s)	2317
AsuHPI	GGTGA	7 cut(s)	109, 216, 469, 904, 1165, 1737, 2011
AsuII	TTCGAA	1 cut(s)	1494
AsuNHI	GCTAGC	1 cut(s)	2257
AvaI	CYCGRG	2 cut(s)	904, 1823
AvaII	GGWCC	1 cut(s)	178
BaeGI	GKGCMC	1 cut(s)	1899
BalI	TGGCCA	1 cut(s)	300
BanI	GGYRCC	2 cut(s)	234, 1804
BanII	GRGCYC	2 cut(s)	543, 999
BbsI	GAAGAC	3 cut(s)	372, 891, 1215
Bbv12I	GWGCWC	2 cut(s)	543, 999
BbvI	GCAGC	8 cut(s)	136, 178, 400, 921, 1258, 1372, 2045, 2317
BccI	CCATC	4 cut(s)	201, 309, 853, 2070
BceAI	ACGGC	2 cut(s)	1373, 1904
BcgI	CGANNNNNNTGC	6 cut(s)	392, 426, 1435, 1469, 1943, 1977
BciT130I	CCWGG	3 cut(s)	890, 1638, 1997
BciVI	GTATCC	1 cut(s)	1313
BclI	TGATCA	1 cut(s)	2094
BcnI	CCSGG	1 cut(s)	2317
BcoDI	GTCTC	1 cut(s)	371
BfaI	CTAG	6 cut(s)	41, 74, 231, 1904, 2006, 2258
BfoI	RGCGCY	1 cut(s)	987
BfrI	CTTAAG	1 cut(s)	170
BfuI	GTATCC	1 cut(s)	1313
BglII	AGATCT	1 cut(s)	1906
Bme1390I	CCNGG	4 cut(s)	890, 1638, 1997, 2317
Bme18I	GGWCC	1 cut(s)	178
BmeT110I	CYCGRG	2 cut(s)	904, 1823
BmgT120I	GGNCC	1 cut(s)	178
BmiI	GGNNCC	2 cut(s)	236, 1806
BmrFI	CCNGG	4 cut(s)	890, 1638, 1997, 2317
BmsI	GCATC	7 cut(s)	136, 400, 967, 1286, 1800, 2079, 2395
BmtI	GCTAGC	1 cut(s)	2261
BpiI	GAAGAC	3 cut(s)	372, 891, 1215
BplI	GAGNNNNNCTC	2 cut(s)	590, 622
BpmI	CTGGAG	1 cut(s)	1963
Bpu10I	CCTNAGC	3 cut(s)	773, 1814, 2186
Bpu14I	TTCGAA	1 cut(s)	1494
BpuEI	CTTGAG	1 cut(s)	532
BpuMI	CCSGG	1 cut(s)	2317
BsaAI	YACGTR	1 cut(s)	874
BsaJI	CCNNGG	4 cut(s)	594, 805, 979, 1636
BsaWI	WCCGGW	1 cut(s)	1316
BsaXI	ACNNNNNCTCC	8 cut(s)	473, 503, 1158, 1188, 1505, 1535, 2031, 2061
Bsc4I	CCNNNNNNNGG	3 cut(s)	1219, 1510, 1941
Bse1I	ACTGG	4 cut(s)	167, 1090, 1855, 1946
Bse3DI	GCAATG	2 cut(s)	1956, 2031
BseBI	CCWGG	3 cut(s)	890, 1638, 1997
BseDI	CCNNGG	4 cut(s)	594, 805, 979, 1636
BseGI	GGATG	7 cut(s)	55, 151, 301, 350, 1301, 2081, 2455
BseLI	CCNNNNNNNGG	3 cut(s)	1219, 1510, 1941
BseMI	GCAATG	2 cut(s)	1956, 2031
BseMII	CTCAG	4 cut(s)	81, 873, 1880, 2266
BseNI	ACTGG	4 cut(s)	167, 1090, 1855, 1946
BseRI	GAGGAG	2 cut(s)	188, 1193
BseSI	GKGCMC	1 cut(s)	1899
BseXI	GCAGC	8 cut(s)	136, 178, 400, 921, 1258, 1372, 2045, 2317
BseYI	CCCAGC	1 cut(s)	1009
BsgI	GTGCAG	3 cut(s)	920, 939, 1528
Bsh1236I	CGCG	4 cut(s)	567, 850, 1457, 1471
BshFI	GGCC	3 cut(s)	300, 1223, 1641
BshNI	GGYRCC	2 cut(s)	234, 1804
BsiHKAI	GWGCWC	2 cut(s)	543, 999
BsiHKCI	CYCGRG	2 cut(s)	904, 1823
BsiSI	CCGG	3 cut(s)	1317, 2037, 2316
BslFI	GGGAC	3 cut(s)	116, 1486, 2147
BslI	CCNNNNNNNGG	3 cut(s)	1219, 1510, 1941
BsmAI	GTCTC	1 cut(s)	371
BsmFI	GGGAC	3 cut(s)	116, 1486, 2147
BsmI	GAATGC	1 cut(s)	149
BsnI	GGCC	3 cut(s)	300, 1223, 1641
BsoBI	CYCGRG	2 cut(s)	904, 1823
Bsp119I	TTCGAA	1 cut(s)	1494
Bsp1286I	GDGCHC	3 cut(s)	543, 999, 1899
Bsp1407I	TGTACA	2 cut(s)	1350, 1752
Bsp143I	GATC	6 cut(s)	864, 975, 1539, 1786, 1906, 2094
BspANI	GGCC	3 cut(s)	300, 1223, 1641
BspCNI	CTCAG	4 cut(s)	80, 872, 1879, 2265
BspFNI	CGCG	4 cut(s)	567, 850, 1457, 1471
BspHI	TCATGA	1 cut(s)	2440
BspLI	GGNNCC	2 cut(s)	236, 1806
BspOI	GCTAGC	1 cut(s)	2261
BspPI	GGATC	1 cut(s)	970
BspT104I	TTCGAA	1 cut(s)	1494
BspT107I	GGYRCC	2 cut(s)	234, 1804
BspTI	CTTAAG	1 cut(s)	170
BsrDI	GCAATG	2 cut(s)	1956, 2031
BsrGI	TGTACA	2 cut(s)	1350, 1752
BsrI	ACTGG	4 cut(s)	167, 1090, 1855, 1946
BssECI	CCNNGG	4 cut(s)	594, 805, 979, 1636
BssMI	GATC	6 cut(s)	864, 975, 1539, 1786, 1906, 2094
BssT1I	CCWWGG	2 cut(s)	594, 805
Bst2UI	CCWGG	3 cut(s)	890, 1638, 1997
Bst4CI	ACNGT	7 cut(s)	1419, 1442, 1484, 1564, 2116, 2275, 2425
Bst6I	CTCTTC	3 cut(s)	54, 272, 2344
BstAFI	CTTAAG	1 cut(s)	170
BstAUI	TGTACA	2 cut(s)	1350, 1752
BstBAI	YACGTR	1 cut(s)	874
BstBI	TTCGAA	1 cut(s)	1494
BstC8I	GCNNGC	6 cut(s)	345, 358, 433, 1047, 2259, 2401
BstDEI	CTNAG	9 cut(s)	67, 773, 859, 1162, 1400, 1814, 1866, 2186, 2252
BstF5I	GGATG	7 cut(s)	55, 151, 301, 350, 1301, 2081, 2455
BstFNI	CGCG	4 cut(s)	567, 850, 1457, 1471
BstH2I	RGCGCY	1 cut(s)	987
BstHHI	GCGC	6 cut(s)	567, 986, 1251, 1309, 1471, 1961
BstKTI	GATC	6 cut(s)	867, 978, 1542, 1789, 1909, 2097
BstMAI	GTCTC	1 cut(s)	371
BstMBI	GATC	6 cut(s)	864, 975, 1539, 1786, 1906, 2094
BstMWI	GCNNNNNNNGC	7 cut(s)	353, 667, 1410, 1710, 2030, 2039, 2048
BstNI	CCWGG	3 cut(s)	890, 1638, 1997
BstNSI	RCATGY	8 cut(s)	332, 373, 435, 784, 1045, 1408, 1839, 2300
BstSCI	CCNGG	4 cut(s)	888, 1636, 1995, 2315
BstSLI	GKGCMC	1 cut(s)	1899
BstSNI	TACGTA	1 cut(s)	874
BstUI	CGCG	4 cut(s)	567, 850, 1457, 1471
BstV1I	GCAGC	8 cut(s)	136, 178, 400, 921, 1258, 1372, 2045, 2317
BstV2I	GAAGAC	3 cut(s)	372, 891, 1215
BstX2I	RGATCY	1 cut(s)	1906
BstYI	RGATCY	1 cut(s)	1906
BsuI	GTATCC	1 cut(s)	1313
BsuRI	GGCC	3 cut(s)	300, 1223, 1641
BtgZI	GCGATG	1 cut(s)	831
BtsCI	GGATG	7 cut(s)	55, 151, 301, 350, 1301, 2081, 2455
BtsI	GCAGTG	2 cut(s)	1961, 2429
BtsIMutI	CAGTG	4 cut(s)	584, 1083, 1961, 2429
Cac8I	GCNNGC	6 cut(s)	345, 358, 433, 1047, 2259, 2401
CciI	TCATGA	1 cut(s)	2440
CfoI	GCGC	6 cut(s)	567, 986, 1251, 1309, 1471, 1961
Cfr13I	GGNCC	1 cut(s)	178
CseI	GACGC	1 cut(s)	1252
CsiI	ACCWGGT	2 cut(s)	888, 1995
Csp6I	GTAC	7 cut(s)	852, 1351, 1397, 1438, 1753, 1805, 2426
CviQI	GTAC	7 cut(s)	852, 1351, 1397, 1438, 1753, 1805, 2426
DdeI	CTNAG	9 cut(s)	67, 773, 859, 1162, 1400, 1814, 1866, 2186, 2252
DpnI	GATC	6 cut(s)	866, 977, 1541, 1788, 1908, 2096
DpnII	GATC	6 cut(s)	864, 975, 1539, 1786, 1906, 2094
DraI	TTTAAA	1 cut(s)	1065
DraIII	CACNNNGTG	1 cut(s)	1999
EaeI	YGGCCR	1 cut(s)	298
Eam1104I	CTCTTC	3 cut(s)	54, 272, 2344
EarI	CTCTTC	3 cut(s)	54, 272, 2344
EciI	GGCGGA	1 cut(s)	1700
Ecl136II	GAGCTC	2 cut(s)	541, 997
Eco105I	TACGTA	1 cut(s)	874
Eco130I	CCWWGG	2 cut(s)	594, 805
Eco24I	GRGCYC	2 cut(s)	543, 999
Eco32I	GATATC	2 cut(s)	604, 1016
Eco47I	GGWCC	1 cut(s)	178
Eco53kI	GAGCTC	2 cut(s)	541, 997
Eco57I	CTGAAG	1 cut(s)	428
Eco88I	CYCGRG	2 cut(s)	904, 1823
EcoICRI	GAGCTC	2 cut(s)	541, 997
EcoO109I	RGGNCCY	1 cut(s)	178
EcoRI	GAATTC	1 cut(s)	2167
EcoRII	CCWGG	3 cut(s)	888, 1636, 1995
EcoRV	GATATC	2 cut(s)	604, 1016
EcoT14I	CCWWGG	2 cut(s)	594, 805
EcoT22I	ATGCAT	1 cut(s)	151
EcoT38I	GRGCYC	2 cut(s)	543, 999
ErhI	CCWWGG	2 cut(s)	594, 805
FalI	AAGNNNNNCTT	2 cut(s)	778, 810
FaqI	GGGAC	3 cut(s)	116, 1486, 2147
FauNDI	CATATG	1 cut(s)	1615
FbaI	TGATCA	1 cut(s)	2094
FblI	GTMKAC	1 cut(s)	2102
FokI	GGATG	6 cut(s)	42, 158, 288, 337, 1308, 2088
FriOI	GRGCYC	2 cut(s)	543, 999
FspBI	CTAG	6 cut(s)	41, 74, 231, 1904, 2006, 2258
GlaI	GCGC	6 cut(s)	566, 985, 1250, 1308, 1470, 1960
GsaI	CCCAGC	1 cut(s)	1013
GsuI	CTGGAG	1 cut(s)	1963
HaeII	RGCGCY	1 cut(s)	987
HaeIII	GGCC	3 cut(s)	300, 1223, 1641
HapII	CCGG	3 cut(s)	1317, 2037, 2316
HgaI	GACGC	1 cut(s)	1252
HhaI	GCGC	6 cut(s)	567, 986, 1251, 1309, 1471, 1961
Hin6I	GCGC	6 cut(s)	565, 984, 1249, 1307, 1469, 1959
HinP1I	GCGC	6 cut(s)	565, 984, 1249, 1307, 1469, 1959
HincII	GTYRAC	2 cut(s)	1557, 2103
HindII	GTYRAC	2 cut(s)	1557, 2103
HindIII	AAGCTT	1 cut(s)	341
HpaII	CCGG	3 cut(s)	1317, 2037, 2316
HphI	GGTGA	7 cut(s)	109, 216, 469, 904, 1165, 1737, 2011
Hpy166II	GTNNAC	5 cut(s)	334, 1557, 2103, 2119, 2302
Hpy188I	TCNGA	9 cut(s)	70, 631, 718, 980, 1020, 1147, 1986, 2075, 2348
Hpy188III	TCNNGA	7 cut(s)	556, 1526, 1537, 1823, 1868, 2336, 2441
Hpy8I	GTNNAC	5 cut(s)	334, 1557, 2103, 2119, 2302
Hpy99I	CGWCG	4 cut(s)	158, 1218, 1246, 1328
HpyCH4III	ACNGT	7 cut(s)	1419, 1442, 1484, 1564, 2116, 2275, 2425
HpyCH4IV	ACGT	4 cut(s)	873, 1271, 1323, 1655
HpyF10VI	GCNNNNNNNGC	7 cut(s)	353, 667, 1410, 1710, 2030, 2039, 2048
HpyF3I	CTNAG	9 cut(s)	67, 773, 859, 1162, 1400, 1814, 1866, 2186, 2252
HpySE526I	ACGT	4 cut(s)	873, 1271, 1323, 1655
HspAI	GCGC	6 cut(s)	565, 984, 1249, 1307, 1469, 1959
KpnI	GGTACC	1 cut(s)	1808
Ksp22I	TGATCA	1 cut(s)	2094
Kzo9I	GATC	6 cut(s)	864, 975, 1539, 1786, 1906, 2094
LmnI	GCTCC	8 cut(s)	575, 623, 777, 1148, 1180, 1513, 2039, 2067
Lsp1109I	GCAGC	8 cut(s)	136, 178, 400, 921, 1258, 1372, 2045, 2317
LweI	GCATC	7 cut(s)	136, 400, 967, 1286, 1800, 2079, 2395
MabI	ACCWGGT	2 cut(s)	888, 1995
MaeI	CTAG	6 cut(s)	41, 74, 231, 1904, 2006, 2258
MaeII	ACGT	4 cut(s)	873, 1271, 1323, 1655
MaeIII	GTNAC	8 cut(s)	3, 869, 1081, 1590, 1665, 1743, 1838, 2311
MalI	GATC	6 cut(s)	866, 977, 1541, 1788, 1908, 2096
MboI	GATC	6 cut(s)	864, 975, 1539, 1786, 1906, 2094
MfeI	CAATTG	1 cut(s)	2123
MflI	RGATCY	1 cut(s)	1906
MhlI	GDGCHC	3 cut(s)	543, 999, 1899
MlsI	TGGCCA	1 cut(s)	300
MluNI	TGGCCA	1 cut(s)	300
MlyI	GAGTC	3 cut(s)	515, 632, 1581
MmeI	TCCRAC	2 cut(s)	282, 2355
Mox20I	TGGCCA	1 cut(s)	300
Mph1103I	ATGCAT	1 cut(s)	151
MroXI	GAANNNNTTC	2 cut(s)	488, 2366
MscI	TGGCCA	1 cut(s)	300
MseI	TTAA	7 cut(s)	171, 645, 1064, 1236, 1313, 2198, 2418
MslI	CAYNNNNRTG	1 cut(s)	2231
Msp20I	TGGCCA	1 cut(s)	300
MspA1I	CMGCKG	1 cut(s)	448
MspCI	CTTAAG	1 cut(s)	170
MspI	CCGG	3 cut(s)	1317, 2037, 2316
MspR9I	CCNGG	4 cut(s)	890, 1638, 1997, 2317
MunI	CAATTG	1 cut(s)	2123
Mva1269I	GAATGC	1 cut(s)	149
MvaI	CCWGG	3 cut(s)	890, 1638, 1997
MvnI	CGCG	4 cut(s)	567, 850, 1457, 1471
MwoI	GCNNNNNNNGC	7 cut(s)	353, 667, 1410, 1710, 2030, 2039, 2048
NciI	CCSGG	1 cut(s)	2317
NdeI	CATATG	1 cut(s)	1615
NdeII	GATC	6 cut(s)	864, 975, 1539, 1786, 1906, 2094
NheI	GCTAGC	1 cut(s)	2257
NlaIV	GGNNCC	2 cut(s)	236, 1806
NmeAIII	GCCGAG	1 cut(s)	1942
NmuCI	GTSAC	3 cut(s)	3, 1081, 1743
NsiI	ATGCAT	1 cut(s)	151
NspI	RCATGY	8 cut(s)	332, 373, 435, 784, 1045, 1408, 1839, 2300
NspV	TTCGAA	1 cut(s)	1494
PaeI	GCATGC	1 cut(s)	435
PaeR7I	CTCGAG	2 cut(s)	904, 1823
PagI	TCATGA	1 cut(s)	2440
PciI	ACATGT	3 cut(s)	328, 369, 2296
PcsI	WCGNNNNNNNCGW	1 cut(s)	435
PctI	GAATGC	1 cut(s)	149
PdmI	GAANNNNTTC	2 cut(s)	488, 2366
PfeI	GAWTC	7 cut(s)	460, 895, 1256, 1819, 2002, 2176, 2203
PflFI	GACNNNGTC	1 cut(s)	1079
PleI	GAGTC	3 cut(s)	514, 632, 1580
PpsI	GAGTC	3 cut(s)	514, 632, 1580
Ppu21I	YACGTR	1 cut(s)	874
PpuMI	RGGWCCY	1 cut(s)	178
PscI	ACATGT	3 cut(s)	328, 369, 2296
PshBI	ATTAAT	1 cut(s)	2198
PsiI	TTATAA	1 cut(s)	1055
Psp124BI	GAGCTC	2 cut(s)	543, 999
Psp1406I	AACGTT	1 cut(s)	1271
Psp5II	RGGWCCY	1 cut(s)	178
Psp6I	CCWGG	3 cut(s)	888, 1636, 1995
PspFI	CCCAGC	1 cut(s)	1009
PspGI	CCWGG	3 cut(s)	888, 1636, 1995
PspN4I	GGNNCC	2 cut(s)	236, 1806
PspPI	GGNCC	1 cut(s)	178
PspPPI	RGGWCCY	1 cut(s)	178
PspXI	VCTCGAGB	1 cut(s)	904
PsuI	RGATCY	1 cut(s)	1906
PsyI	GACNNNGTC	1 cut(s)	1079
PvuII	CAGCTG	1 cut(s)	448
RsaI	GTAC	7 cut(s)	853, 1352, 1398, 1439, 1754, 1806, 2427
RsaNI	GTAC	7 cut(s)	852, 1351, 1397, 1438, 1753, 1805, 2426
RseI	CAYNNNNRTG	1 cut(s)	2231
SacI	GAGCTC	2 cut(s)	543, 999
SalI	GTCGAC	1 cut(s)	2101
SaqAI	TTAA	7 cut(s)	171, 645, 1064, 1236, 1313, 2198, 2418
Sau3AI	GATC	6 cut(s)	864, 975, 1539, 1786, 1906, 2094
Sau96I	GGNCC	1 cut(s)	178
SchI	GAGTC	3 cut(s)	515, 632, 1581
ScrFI	CCNGG	4 cut(s)	890, 1638, 1997, 2317
SduI	GDGCHC	3 cut(s)	543, 999, 1899
SexAI	ACCWGGT	2 cut(s)	888, 1995
SfaNI	GCATC	7 cut(s)	136, 400, 967, 1286, 1800, 2079, 2395
Sfr274I	CTCGAG	2 cut(s)	904, 1823
SfuI	TTCGAA	1 cut(s)	1494
SinI	GGWCC	1 cut(s)	178
SlaI	CTCGAG	2 cut(s)	904, 1823
SmiMI	CAYNNNNRTG	1 cut(s)	2231
SmlI	CTYRAG	4 cut(s)	170, 511, 904, 1823
SmoI	CTYRAG	4 cut(s)	170, 511, 904, 1823
SnaBI	TACGTA	1 cut(s)	874
SphI	GCATGC	1 cut(s)	435
SspMI	CTAG	6 cut(s)	41, 74, 231, 1904, 2006, 2258
SstI	GAGCTC	2 cut(s)	543, 999
StyD4I	CCNGG	4 cut(s)	888, 1636, 1995, 2315
StyI	CCWWGG	2 cut(s)	594, 805
TaaI	ACNGT	7 cut(s)	1419, 1442, 1484, 1564, 2116, 2275, 2425
TaiI	ACGT	4 cut(s)	876, 1274, 1326, 1658
TaqI	TCGA	7 cut(s)	156, 438, 905, 1494, 1525, 1824, 2102
TaqII	GACCGA	2 cut(s)	1227, 1360
TatI	WGTACW	3 cut(s)	1350, 1396, 1752
TauI	GCSGC	3 cut(s)	673, 710, 1707
TfiI	GAWTC	7 cut(s)	460, 895, 1256, 1819, 2002, 2176, 2203
Tru1I	TTAA	7 cut(s)	171, 645, 1064, 1236, 1313, 2198, 2418
Tru9I	TTAA	7 cut(s)	171, 645, 1064, 1236, 1313, 2198, 2418
TscAI	CASTG	4 cut(s)	591, 1090, 1961, 2436
TseFI	GTSAC	3 cut(s)	3, 1081, 1743
TseI	GCWGC	8 cut(s)	124, 166, 413, 934, 1246, 1360, 2033, 2330
Tsp45I	GTSAC	3 cut(s)	3, 1081, 1743
TspGWI	ACGGA	2 cut(s)	939, 2080
TspRI	CASTG	4 cut(s)	591, 1090, 1961, 2436
Tth111I	GACNNNGTC	1 cut(s)	1079
Vha464I	CTTAAG	1 cut(s)	170
VpaK11BI	GGWCC	1 cut(s)	178
VspI	ATTAAT	1 cut(s)	2198
XapI	RAATTY	2 cut(s)	2167, 2362
XceI	RCATGY	8 cut(s)	332, 373, 435, 784, 1045, 1408, 1839, 2300
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2288
XhoI	CTCGAG	2 cut(s)	904, 1823
XmiI	GTMKAC	1 cut(s)	2102
XmnI	GAANNNNTTC	2 cut(s)	488, 2366
XspI	CTAG	6 cut(s)	41, 74, 231, 1904, 2006, 2258
Zsp2I	ATGCAT	1 cut(s)	151

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.