Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0011751

Physical Location & Seq

Genomic Coordinates Reverse (-)

8029739 .. 8034804

Gene Structure 5066 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006525

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2487 bp

ATGTTGTCGAGGGCTTCCATGGAACACTCACAAGTGATAGAAGAACAACCTCTTCCTTCTTTTCTCTCGGCTCATCAACTTAAGAAGCAAAGAGAGAAGATGGTGAAGTTCTCTAAGCAATTCGAGGCACAACTAGTTCCCGAATGGAAAGATGCATTCGTAGATTACTGGCAACTCAAGAAGGATCTCAAAAAAATCCATCTTCTTAATATTAACAACAACAACAACAACAACAACACACCTACTCATAATAGCTCTTTATCTAACACTCTCTTCACATCTATAAAGAAGTTCTCTTTATTTGGCCATCAACACAGAGAACATGAACTCATACATGTTCACAAGAAGCTTGCCTCATCAGCAAGCAAGGGAGACATGTACGAAACTGAATTGTTCGAGCAACTTGCTGATACTGATGCTGCGAAAGAGTTTTTTGCATGCTTGGACCTTCAACTCAACAAGGTGAATCAGTTCTACCAGAAAAAGGAGAAAGAGTTCATGGAGAGAGGGCAGTCCTTGAGGAAGCAGATGGATATACTCATTGAGCTCAAAACCGCTTTCAAGCAACAGCGCGCCAAAGGTGGGGAATCTGCTCAGGACTCCAAGGAGGAAGCCTCTATCTCATGCACCTTCTCATCTGAGGAGGACTCTGTGAAGGACAAAACGGAACTTGAACAGCTGCAAGAAACAGATGAGTTGGAGAAAAATGATGAAGTAGCCTACACAGAAGTCCCAATATCAGGCGAATTGGTGAAACCAATGAGAATGAAAAGTGAGGATATTGGGAAACAACTGAGGAGCGTCTCAAGCCGTTCTTTCAGTTGCCAAGGGAAGAACTTAAAGATAAACATTCCTCTGACTACACCGTCACGCACCTTCTCAGCAATCAGTTATTTAGTTTGGGAAGATCTAGTTAATCAGTCCTCAAAGAAATGTACTTCAGAAGGCATGAGTAAGCTGCACATCAACAAAACCAAGTTGCATCATGCAGATAAGATGATCAGAGGAGCTTTTGTTGAGCTTTACAAAGGCTTGGGATATCTCAAAACTTACAGGAACTTGAACATGCTTGCTTTTATAAAGATTTTAAAGAAGTTTGACAAGGCGACTGAAAAACAAGTTCTTCCAATCTATCTAAAAGTTGTTGAGAGTTCCTATTTCAACAGCTCAGATAAGGTTATGAATCTAGCAGATGAAGTTGAGGAGCTGTTTACAAAACACTTCGCTGAAGAAGACCGAAGAAAGGCCATGAAATACCTTAAACCACATCATCGCAAAGAATCACACTCTGTAACGTTCTTCATTGGTCTATTCACTGGGTGTTTCATTGCACTCTTTGCTGGATATGTCATTATGGCTCATATTACTGGGTTGTACAGAAGGCAACCAAATTCTATATACATGGAAACTGCCTACCCTATACTCAGCATGTTCAGCCTATTGTTTCTACACTTCTTCCTATACGGTTGTAACATTTTCGCGTGGAGAAAGGCTCGTATAAATTACAGTTTCATCTTTGAACTATCCCCAACAAAGGAGCTGAAGTACAGAGATGTGTTCTTGATCTGTACTACATCAATGACTGTCGTGGTTGGGGTCATGTTTCTTCATTTGTTCTTGCTAACAAAAGGATACTCATACACCCAAGTTCGAGCAATCCCCGGTCTTCTACTGCTGATGTTTCTACTAATACTTGTGTGCCCCTTCAACATCATCTACAAATCAAGCCGTTGTCGTCTTCTTCGTGTGATAAGAAATATCATTTTGTCACCTCTGTACAAGGTTGTCATGCTAGACTTCTTCATGGCAGACCAACTTTGTAGTCAGGTTCCGATGCTTAGGAACCTCGAGTATGTGGCATGTTACTACATAACTGGAAGCTACAAAACTCAGGACTATGGCTATTGCATGAGGGCCACGCATTACCGCGATCTTGCTTATGCCGTGTCCTTCCTGCCCTATTACTGGAGGGCAATGCAGTGTGCTAGGAGGTGGTTTGATGAGGGGCAGACGAGCCACCTGGTCAATCTCGGCAAATATGTGTCTGCAATGCTAGCAGCAGGAACAAAAGTGGCTTATGAGAAGGAAAAGAGTATTGGATGGCTCTGTCTGGTTGTGATCATGTCAACTTTTGCAACAGTGTACCAATTGTATTGGGACTTTGTAAAGGATTGGGGTTTGCTTCAAATGAATTCCAAGAATCCTTTGCTTAGGAATGAATTAATGCTTCGCCGAAAGATCATTTACTACTTCTCAATGGGATTAAACCTTGTTCTCAGGCTAGCTTGGTTACAAACTGTTCTTCATTCAAGTTTTGGACATGTGGACTACAGAGTAACAGGGCTATTTTTAGCAGCCCTTGAAGTCATTAGAAGAGGGTTATGGAACTTTTACAGGTTGGAGAATGAGCATCTAAATAATGCTGGGAAGTTTAGAGCAGTTAAAACAGTACCACTTCCTTTTCATGAAGTGGATGAGGAAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0006950 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0012505 GO:0015698 GO:0016020 GO:0016036 GO:0031667 GO:0031668 GO:0031669 GO:0031984 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0071496 GO:0071944 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

829

Amino Acids

96.55

Weight (kDa)

9.16

Isoelectric Point (pI)

43.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	35 - 382	3.6e-65	SPX domain
EXS	PF03124	472 - 805	5.1e-98	EXS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011751)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68740 AT1G68740
fragaria_vesca	FvH4_4g28410
malus_domestica	MD13G1049800.v1.1 MD16G1050800.v1.1
prunus_persica	Prupe.1G301900_v2.0.a1
pyrus_communis	pycom13g04410 pycom13g04420 pycom16g04450
rosa_chinensis	RchiOBHm_Chr4g0436361
rosa_laevigata	RLG00000006525
rosa_multiflora	Rmu_sc0006449.1_g000007
rosa_roxburghii	Rroxscaffold_5G00377530
rosa_rugosa	Rorug04G0293300
rosa_samantha	Rh4AG347500 Rh4BG356300 Rh4CG370900 Rh4DG350000
rosa_wichuraiana	Rw4G030380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1079
AasI	GACNNNNNNGTC	1 cut(s)	865
AccII	CGCG	3 cut(s)	573, 1481, 1929
AciI	CCGC	2 cut(s)	555, 1927
AclI	AACGTT	1 cut(s)	1295
AclWI	GGATC	1 cut(s)	192
AcoI	YGGCCR	1 cut(s)	304
AcsI	RAATTY	2 cut(s)	1390, 2191
AcuI	CTGAAG	3 cut(s)	924, 1248, 1562
AdeI	CACNNNGTG	1 cut(s)	1320
AfaI	GTAC	8 cut(s)	380, 937, 1376, 1547, 1570, 1778, 2144, 2451
AfiI	CCNNNNNNNGG	6 cut(s)	484, 582, 740, 1243, 1534, 1965
AflII	CTTAAG	1 cut(s)	80
AflIII	ACRYGT	3 cut(s)	334, 375, 2320
AhlI	ACTAGT	1 cut(s)	133
AjnI	CCWGG	1 cut(s)	2019
AjuI	GAANNNNNNNTTGG	2 cut(s)	2079, 2111
AloI	GAACNNNNNNTCC	2 cut(s)	479, 511
Alw21I	GWGCWC	1 cut(s)	549
Alw26I	GTCTC	2 cut(s)	366, 808
AlwI	GGATC	1 cut(s)	192
Ama87I	CYCGRG	1 cut(s)	1847
AoxI	GGCC	3 cut(s)	304, 1245, 1914
ApeKI	GCWGC	5 cut(s)	419, 679, 958, 2057, 2354
ApoI	RAATTY	2 cut(s)	1390, 2191
AseI	ATTAAT	1 cut(s)	2222
Asp700I	GAANNNNTTC	2 cut(s)	470, 494
AspLEI	GCGC	2 cut(s)	573, 575
AspS9I	GGNCC	2 cut(s)	445, 1914
AsuC2I	CCSGG	1 cut(s)	1662
AsuHPI	GGTGA	4 cut(s)	115, 475, 763, 1761
AsuNHI	GCTAGC	2 cut(s)	2053, 2281
AvaI	CYCGRG	1 cut(s)	1847
AvaII	GGWCC	1 cut(s)	445
BaeGI	GKGCMC	1 cut(s)	1703
BalI	TGGCCA	1 cut(s)	306
BanII	GRGCYC	1 cut(s)	549
BbsI	GAAGAC	3 cut(s)	1239, 1658, 1730
Bbv12I	GWGCWC	1 cut(s)	549
BbvI	GCAGC	5 cut(s)	406, 666, 945, 2069, 2366
BccI	CCATC	5 cut(s)	94, 207, 315, 523, 2094
BceAI	ACGGC	3 cut(s)	795, 1713, 1928
BcgI	CGANNNNNNTGC	2 cut(s)	386, 420
BciT130I	CCWGG	1 cut(s)	2021
BciVI	GTATCC	1 cut(s)	1625
BclI	TGATCA	2 cut(s)	999, 2118
BcnI	CCSGG	1 cut(s)	1662
BcoDI	GTCTC	2 cut(s)	366, 808
BcuI	ACTAGT	1 cut(s)	133
BfaI	CTAG	7 cut(s)	134, 911, 1187, 1793, 1986, 2054, 2282
BfmI	CTRYAG	1 cut(s)	2329
BfrI	CTTAAG	1 cut(s)	80
BfuI	GTATCC	1 cut(s)	1625
BglII	AGATCT	1 cut(s)	907
BisI	GCNGC	5 cut(s)	420, 680, 959, 2058, 2355
BlsI	GCNGC	5 cut(s)	421, 681, 960, 2059, 2356
Bme1390I	CCNGG	2 cut(s)	1662, 2021
Bme18I	GGWCC	1 cut(s)	445
BmeT110I	CYCGRG	1 cut(s)	1847
BmgT120I	GGNCC	2 cut(s)	445, 1914
BmiI	GGNNCC	2 cut(s)	1830, 1844
BmrFI	CCNGG	2 cut(s)	1662, 2021
BmrI	ACTGGG	2 cut(s)	1326, 1377
BmsI	GCATC	5 cut(s)	142, 406, 991, 1824, 2419
BmtI	GCTAGC	2 cut(s)	2057, 2285
BmuI	ACTGGG	2 cut(s)	1326, 1377
BpiI	GAAGAC	3 cut(s)	1239, 1658, 1730
BplI	GAGNNNNNCTC	6 cut(s)	599, 631, 632, 664, 1477, 1509
BpmI	CTGGAG	1 cut(s)	1987
Bpu10I	CCTNAGC	3 cut(s)	594, 1838, 2210
BpuEI	CTTGAG	3 cut(s)	161, 538, 790
BpuMI	CCSGG	1 cut(s)	1662
BsaJI	CCNNGG	4 cut(s)	18, 603, 826, 1660
BsaXI	ACNNNNNCTCC	6 cut(s)	479, 509, 999, 1029, 1529, 1559
Bsc4I	CCNNNNNNNGG	6 cut(s)	484, 582, 740, 1243, 1534, 1965
Bse1I	ACTGG	5 cut(s)	173, 1321, 1372, 1879, 1970
Bse3DI	GCAATG	3 cut(s)	1326, 1980, 2055
BseBI	CCWGG	1 cut(s)	2021
BseDI	CCNNGG	4 cut(s)	18, 603, 826, 1660
BseGI	GGATG	2 cut(s)	2105, 2479
BseLI	CCNNNNNNNGG	6 cut(s)	484, 582, 740, 1243, 1534, 1965
BseMI	GCAATG	3 cut(s)	1326, 1980, 2055
BseMII	CTCAG	8 cut(s)	608, 630, 785, 894, 1182, 1438, 1904, 2290
BseNI	ACTGG	5 cut(s)	173, 1321, 1372, 1879, 1970
BsePI	GCGCGC	1 cut(s)	571
BseRI	GAGGAG	4 cut(s)	656, 811, 1020, 1217
BseSI	GKGCMC	1 cut(s)	1703
BseXI	GCAGC	5 cut(s)	406, 666, 945, 2069, 2366
BseYI	CCCAGC	1 cut(s)	2423
BsgI	GTGCAG	1 cut(s)	944
Bsh1236I	CGCG	3 cut(s)	573, 1481, 1929
BshFI	GGCC	3 cut(s)	306, 1247, 1916
BsiHKAI	GWGCWC	1 cut(s)	549
BsiHKCI	CYCGRG	1 cut(s)	1847
BsiSI	CCGG	1 cut(s)	1662
BslFI	GGGAC	2 cut(s)	716, 2171
BslI	CCNNNNNNNGG	6 cut(s)	484, 582, 740, 1243, 1534, 1965
BsmAI	GTCTC	2 cut(s)	366, 808
BsmBI	CGTCTC	1 cut(s)	808
BsmFI	GGGAC	2 cut(s)	716, 2171
BsmI	GAATGC	1 cut(s)	155
BsnI	GGCC	3 cut(s)	306, 1247, 1916
BsoBI	CYCGRG	1 cut(s)	1847
Bsp1286I	GDGCHC	2 cut(s)	549, 1703
Bsp1407I	TGTACA	2 cut(s)	1374, 1776
Bsp143I	GATC	7 cut(s)	184, 907, 999, 1563, 1930, 2118, 2238
Bsp19I	CCATGG	1 cut(s)	18
BspACI	CCGC	2 cut(s)	555, 1927
BspANI	GGCC	3 cut(s)	306, 1247, 1916
BspCNI	CTCAG	8 cut(s)	607, 631, 786, 893, 1181, 1437, 1903, 2289
BspFNI	CGCG	3 cut(s)	573, 1481, 1929
BspHI	TCATGA	1 cut(s)	2464
BspLI	GGNNCC	2 cut(s)	1830, 1844
BspOI	GCTAGC	2 cut(s)	2057, 2285
BspPI	GGATC	1 cut(s)	192
BspTI	CTTAAG	1 cut(s)	80
BsrDI	GCAATG	3 cut(s)	1326, 1980, 2055
BsrGI	TGTACA	2 cut(s)	1374, 1776
BsrI	ACTGG	5 cut(s)	173, 1321, 1372, 1879, 1970
BssECI	CCNNGG	4 cut(s)	18, 603, 826, 1660
BssHII	GCGCGC	1 cut(s)	571
BssMI	GATC	7 cut(s)	184, 907, 999, 1563, 1930, 2118, 2238
BssT1I	CCWWGG	3 cut(s)	18, 603, 826
Bst2UI	CCWGG	1 cut(s)	2021
Bst4CI	ACNGT	7 cut(s)	867, 1466, 1508, 1585, 2140, 2299, 2449
Bst6I	CTCTTC	3 cut(s)	57, 278, 2368
BstAFI	CTTAAG	1 cut(s)	80
BstAPI	GCANNNNNTGC	1 cut(s)	1337
BstAUI	TGTACA	2 cut(s)	1374, 1776
BstC8I	GCNNGC	7 cut(s)	351, 364, 439, 573, 1071, 2055, 2283
BstDSI	CCRYGG	1 cut(s)	18
BstF5I	GGATG	2 cut(s)	2105, 2479
BstFNI	CGCG	3 cut(s)	573, 1481, 1929
BstHHI	GCGC	2 cut(s)	573, 575
BstKTI	GATC	7 cut(s)	187, 910, 1002, 1566, 1933, 2121, 2241
BstMAI	GTCTC	2 cut(s)	366, 808
BstMBI	GATC	7 cut(s)	184, 907, 999, 1563, 1930, 2118, 2238
BstMWI	GCNNNNNNNGC	5 cut(s)	359, 807, 1337, 1434, 2054
BstNI	CCWGG	1 cut(s)	2021
BstNSI	RCATGY	7 cut(s)	338, 379, 441, 1069, 1432, 1863, 2324
BstSCI	CCNGG	2 cut(s)	1660, 2019
BstSFI	CTRYAG	1 cut(s)	2329
BstSLI	GKGCMC	1 cut(s)	1703
BstUI	CGCG	3 cut(s)	573, 1481, 1929
BstV1I	GCAGC	5 cut(s)	406, 666, 945, 2069, 2366
BstV2I	GAAGAC	3 cut(s)	1239, 1658, 1730
BstX2I	RGATCY	2 cut(s)	184, 907
BstYI	RGATCY	2 cut(s)	184, 907
BsuI	GTATCC	1 cut(s)	1625
BsuRI	GGCC	3 cut(s)	306, 1247, 1916
BtgI	CCRYGG	1 cut(s)	18
BtgZI	GCGATG	1 cut(s)	1256
BtsCI	GGATG	2 cut(s)	2105, 2479
BtsI	GCAGTG	1 cut(s)	1985
BtsIMutI	CAGTG	3 cut(s)	1314, 1985, 2145
Cac8I	GCNNGC	7 cut(s)	351, 364, 439, 573, 1071, 2055, 2283
CciI	TCATGA	1 cut(s)	2464
CfoI	GCGC	2 cut(s)	573, 575
Cfr13I	GGNCC	2 cut(s)	445, 1914
CseI	GACGC	1 cut(s)	790
CsiI	ACCWGGT	1 cut(s)	2019
Csp6I	GTAC	8 cut(s)	379, 936, 1375, 1546, 1569, 1777, 2143, 2450
CviQI	GTAC	8 cut(s)	379, 936, 1375, 1546, 1569, 1777, 2143, 2450
DpnI	GATC	7 cut(s)	186, 909, 1001, 1565, 1932, 2120, 2240
DpnII	GATC	7 cut(s)	184, 907, 999, 1563, 1930, 2118, 2238
DraI	TTTAAA	1 cut(s)	1089
DraIII	CACNNNGTG	1 cut(s)	1320
DrdI	GACNNNNNNGTC	1 cut(s)	865
DseDI	GACNNNNNNGTC	1 cut(s)	865
EaeI	YGGCCR	1 cut(s)	304
Eam1104I	CTCTTC	3 cut(s)	57, 278, 2368
EarI	CTCTTC	3 cut(s)	57, 278, 2368
Ecl136II	GAGCTC	1 cut(s)	547
Eco130I	CCWWGG	3 cut(s)	18, 603, 826
Eco24I	GRGCYC	1 cut(s)	549
Eco32I	GATATC	1 cut(s)	1040
Eco47I	GGWCC	1 cut(s)	445
Eco53kI	GAGCTC	1 cut(s)	547
Eco57I	CTGAAG	3 cut(s)	924, 1248, 1562
Eco88I	CYCGRG	1 cut(s)	1847
EcoICRI	GAGCTC	1 cut(s)	547
EcoRI	GAATTC	1 cut(s)	2191
EcoRII	CCWGG	1 cut(s)	2019
EcoRV	GATATC	1 cut(s)	1040
EcoT14I	CCWWGG	3 cut(s)	18, 603, 826
EcoT22I	ATGCAT	1 cut(s)	157
EcoT38I	GRGCYC	1 cut(s)	549
ErhI	CCWWGG	3 cut(s)	18, 603, 826
Esp3I	CGTCTC	1 cut(s)	808
FalI	AAGNNNNNCTT	2 cut(s)	799, 831
FaqI	GGGAC	2 cut(s)	716, 2171
FbaI	TGATCA	2 cut(s)	999, 2118
Fnu4HI	GCNGC	5 cut(s)	420, 680, 959, 2058, 2355
FokI	GGATG	1 cut(s)	2112
FriOI	GRGCYC	1 cut(s)	549
Fsp4HI	GCNGC	5 cut(s)	420, 680, 959, 2058, 2355
FspBI	CTAG	7 cut(s)	134, 911, 1187, 1793, 1986, 2054, 2282
GlaI	GCGC	2 cut(s)	572, 574
GluI	GCNGC	5 cut(s)	420, 680, 959, 2058, 2355
GsaI	CCCAGC	1 cut(s)	2427
GsuI	CTGGAG	1 cut(s)	1987
HaeIII	GGCC	3 cut(s)	306, 1247, 1916
HapII	CCGG	1 cut(s)	1662
HgaI	GACGC	1 cut(s)	790
HhaI	GCGC	2 cut(s)	573, 575
Hin6I	GCGC	2 cut(s)	571, 573
HinP1I	GCGC	2 cut(s)	571, 573
HincII	GTYRAC	1 cut(s)	2127
HindII	GTYRAC	1 cut(s)	2127
HindIII	AAGCTT	1 cut(s)	347
HinfI	GANTC	7 cut(s)	466, 587, 599, 647, 1183, 1280, 2200
HpaII	CCGG	1 cut(s)	1662
HphI	GGTGA	4 cut(s)	115, 475, 763, 1761
Hpy166II	GTNNAC	5 cut(s)	340, 1212, 2127, 2143, 2326
Hpy188I	TCNGA	6 cut(s)	640, 858, 943, 1004, 1171, 1833
Hpy188III	TCNNGA	6 cut(s)	140, 178, 596, 1561, 1892, 2465
Hpy8I	GTNNAC	5 cut(s)	340, 1212, 2127, 2143, 2326
HpyCH4III	ACNGT	7 cut(s)	867, 1466, 1508, 1585, 2140, 2299, 2449
HpyCH4IV	ACGT	1 cut(s)	1295
HpyF10VI	GCNNNNNNNGC	5 cut(s)	359, 807, 1337, 1434, 2054
HpySE526I	ACGT	1 cut(s)	1295
HspAI	GCGC	2 cut(s)	571, 573
Ksp22I	TGATCA	2 cut(s)	999, 2118
Kzo9I	GATC	7 cut(s)	184, 907, 999, 1563, 1930, 2118, 2238
LmnI	GCTCC	4 cut(s)	798, 1007, 1204, 1537
Lsp1109I	GCAGC	5 cut(s)	406, 666, 945, 2069, 2366
LweI	GCATC	5 cut(s)	142, 406, 991, 1824, 2419
MabI	ACCWGGT	1 cut(s)	2019
MaeI	CTAG	7 cut(s)	134, 911, 1187, 1793, 1986, 2054, 2282
MaeII	ACGT	1 cut(s)	1295
MaeIII	GTNAC	7 cut(s)	867, 1291, 1469, 1767, 1862, 2289, 2335
MalI	GATC	7 cut(s)	186, 909, 1001, 1565, 1932, 2120, 2240
MboI	GATC	7 cut(s)	184, 907, 999, 1563, 1930, 2118, 2238
MfeI	CAATTG	1 cut(s)	2147
MflI	RGATCY	2 cut(s)	184, 907
MhlI	GDGCHC	2 cut(s)	549, 1703
MlsI	TGGCCA	1 cut(s)	306
MluCI	AATT	8 cut(s)	119, 389, 746, 1390, 1501, 2147, 2191, 2219
MluNI	TGGCCA	1 cut(s)	306
MlyI	GAGTC	2 cut(s)	593, 641
MmeI	TCCRAC	2 cut(s)	678, 2379
Mox20I	TGGCCA	1 cut(s)	306
Mph1103I	ATGCAT	1 cut(s)	157
MroXI	GAANNNNTTC	2 cut(s)	470, 494
MscI	TGGCCA	1 cut(s)	306
Msp20I	TGGCCA	1 cut(s)	306
MspA1I	CMGCKG	1 cut(s)	679
MspCI	CTTAAG	1 cut(s)	80
MspI	CCGG	1 cut(s)	1662
MspR9I	CCNGG	2 cut(s)	1662, 2021
MunI	CAATTG	1 cut(s)	2147
Mva1269I	GAATGC	1 cut(s)	155
MvaI	CCWGG	1 cut(s)	2021
MvnI	CGCG	3 cut(s)	573, 1481, 1929
MwoI	GCNNNNNNNGC	5 cut(s)	359, 807, 1337, 1434, 2054
NciI	CCSGG	1 cut(s)	1662
NcoI	CCATGG	1 cut(s)	18
NdeII	GATC	7 cut(s)	184, 907, 999, 1563, 1930, 2118, 2238
NheI	GCTAGC	2 cut(s)	2053, 2281
NlaIV	GGNNCC	2 cut(s)	1830, 1844
NmeAIII	GCCGAG	2 cut(s)	47, 2010
NmuCI	GTSAC	2 cut(s)	867, 1767
NsiI	ATGCAT	1 cut(s)	157
NspI	RCATGY	7 cut(s)	338, 379, 441, 1069, 1432, 1863, 2324
PaeI	GCATGC	1 cut(s)	441
PaeR7I	CTCGAG	1 cut(s)	1847
PagI	TCATGA	1 cut(s)	2464
PauI	GCGCGC	1 cut(s)	571
PciI	ACATGT	3 cut(s)	334, 375, 2320
PcsI	WCGNNNNNNNCGW	1 cut(s)	1741
PctI	GAATGC	1 cut(s)	155
PdmI	GAANNNNTTC	2 cut(s)	470, 494
PfeI	GAWTC	5 cut(s)	466, 587, 1183, 1280, 2200
PkrI	GCNGC	5 cut(s)	421, 681, 960, 2059, 2356
PleI	GAGTC	2 cut(s)	593, 641
PpsI	GAGTC	2 cut(s)	593, 641
PscI	ACATGT	3 cut(s)	334, 375, 2320
PshBI	ATTAAT	1 cut(s)	2222
PsiI	TTATAA	1 cut(s)	1079
Psp124BI	GAGCTC	1 cut(s)	549
Psp1406I	AACGTT	1 cut(s)	1295
Psp6I	CCWGG	1 cut(s)	2019
PspFI	CCCAGC	1 cut(s)	2423
PspGI	CCWGG	1 cut(s)	2019
PspN4I	GGNNCC	2 cut(s)	1830, 1844
PspPI	GGNCC	2 cut(s)	445, 1914
PspXI	VCTCGAGB	1 cut(s)	1847
PsuI	RGATCY	2 cut(s)	184, 907
PteI	GCGCGC	1 cut(s)	571
PvuII	CAGCTG	1 cut(s)	679
RsaI	GTAC	8 cut(s)	380, 937, 1376, 1547, 1570, 1778, 2144, 2451
RsaNI	GTAC	8 cut(s)	379, 936, 1375, 1546, 1569, 1777, 2143, 2450
SacI	GAGCTC	1 cut(s)	549
SatI	GCNGC	5 cut(s)	420, 680, 959, 2058, 2355
Sau3AI	GATC	7 cut(s)	184, 907, 999, 1563, 1930, 2118, 2238
Sau96I	GGNCC	2 cut(s)	445, 1914
SchI	GAGTC	2 cut(s)	593, 641
ScrFI	CCNGG	2 cut(s)	1662, 2021
SduI	GDGCHC	2 cut(s)	549, 1703
SexAI	ACCWGGT	1 cut(s)	2019
SfaNI	GCATC	5 cut(s)	142, 406, 991, 1824, 2419
SfcI	CTRYAG	1 cut(s)	2329
Sfr274I	CTCGAG	1 cut(s)	1847
SinI	GGWCC	1 cut(s)	445
SlaI	CTCGAG	1 cut(s)	1847
SmlI	CTYRAG	5 cut(s)	80, 176, 517, 805, 1847
SmoI	CTYRAG	5 cut(s)	80, 176, 517, 805, 1847
SpeI	ACTAGT	1 cut(s)	133
SphI	GCATGC	1 cut(s)	441
Sse9I	AATT	8 cut(s)	119, 389, 746, 1390, 1501, 2147, 2191, 2219
SsiI	CCGC	2 cut(s)	555, 1927
SspI	AATATT	1 cut(s)	211
SspMI	CTAG	7 cut(s)	134, 911, 1187, 1793, 1986, 2054, 2282
SstI	GAGCTC	1 cut(s)	549
StyD4I	CCNGG	2 cut(s)	1660, 2019
StyI	CCWWGG	3 cut(s)	18, 603, 826
TaaI	ACNGT	7 cut(s)	867, 1466, 1508, 1585, 2140, 2299, 2449
TaiI	ACGT	1 cut(s)	1298
TaqI	TCGA	5 cut(s)	8, 123, 396, 1651, 1848
TaqII	GACCGA	1 cut(s)	1251
TasI	AATT	8 cut(s)	119, 389, 746, 1390, 1501, 2147, 2191, 2219
TatI	WGTACW	5 cut(s)	935, 1374, 1545, 1568, 1776
TfiI	GAWTC	5 cut(s)	466, 587, 1183, 1280, 2200
TscAI	CASTG	3 cut(s)	1321, 1985, 2145
TseFI	GTSAC	2 cut(s)	867, 1767
TseI	GCWGC	5 cut(s)	419, 679, 958, 2057, 2354
Tsp45I	GTSAC	2 cut(s)	867, 1767
TspGWI	ACGGA	1 cut(s)	680
TspRI	CASTG	3 cut(s)	1321, 1985, 2145
Vha464I	CTTAAG	1 cut(s)	80
VpaK11BI	GGWCC	1 cut(s)	445
VspI	ATTAAT	1 cut(s)	2222
XapI	RAATTY	2 cut(s)	1390, 2191
XceI	RCATGY	7 cut(s)	338, 379, 441, 1069, 1432, 1863, 2324
XhoI	CTCGAG	1 cut(s)	1847
XmnI	GAANNNNTTC	2 cut(s)	470, 494
XspI	CTAG	7 cut(s)	134, 911, 1187, 1793, 1986, 2054, 2282
Zsp2I	ATGCAT	1 cut(s)	157

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.