Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0011751

Physical Location & Seq

Genomic Coordinates Forward (+)

59668943 .. 59674033

Gene Structure 5091 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ40469

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2481 bp

ATGTTGTCGAGGGCTTCCATGGAACACTCACAAGTGATAGAAGAACAACCTCTTTCTTCTTTTCTCTCGGCTCATCAACTTAAGAAGCAAAGAGAGAAGATGGTGAAGTTCTCTAAGCAATTCGAGGCACAACTAGTTCCCGAATGGAAAGATGCATTCGTAGATTACTGGCAACTCAAGAAGGATCTCAAAAAAATCCATCTCCTTAATATTAACAACAACAACAACAACACACCTACTCATAATAGCTCTTTATCTAACACTCTCTTCACATCTATAAAGAAGTTCTCTTTATTTGGCCATCAACACAGAGAACATGAACTCATACATGTTCACAAGAAGCTTGCCTCATCAGCAAGCAAGGGAGACATGTACGAAACTGAATTGTTCGAGCAACTTGCTGATACTGATGCTGCGAAAGAGTTTTTTGCATGCTTGGACCTTCAACTCAACAAGGTGAATCAGTTCTACCAGAAAAAGGAGAAAGAGTTCATGGAGAGAGGGCAGTCCTTGAGGAAGCAGATGGATATACTCATTGAGCTCAAAACCGCTTTCAAGCAACAGCGCGCCAAAGGTGGAGCATCTGCTCAGGACTCCAAGGAGGAAGCCTCTATCTCATGCACCTTCTCATCTGAGGAGGACTCTGTGAAGGACAAAACAGAACTTGAACAGCCGCAAGAAACAGATGAGTTGGAGAAAAATGATGAAGCAGCCTACACTGAAGTCCCAATATCAGGCGAATTGGTGAAACCAATAAGAATGAAAAGTGAGGATATTGGGAAACAACTGAGGAGCGCCTCAAGCCGTTCTTTCAGTTGCCAAGGGAAGAACTTAAAGATAAACATTCCTCTGACTACACCGTCACGCACCTTCTCAGCAATCAGTTATTTAGTTTGGGAAGATCTAGTTAATCAGTCCTCAAAGAAATGTACTTCAGAAGGCATAAGTAAGCTGCACATCAACAAAACCAAGTTGCATCATGCAGATAAGATGATCAGAGGAGCTTTTGTTGAGCTGTACAAAGGCTTGGGATATCTCAAAACCTACAGGAACTTGAACATGCTTGCTTTTATAAAGATTTTAAAGAAGTTTGACAAGGCGACTGAAAAACAAGTGCTTCCAATCTATCTAAAAGTTGTTGAGAGTTCCTATTTCAACAGCTCAGATAAGGTTATGAATCTAGCAGATGAAGTTGAGGAGCTGTTTACCAAACACTTCGCTGAAGAAGACCGAAGAAAGGCCATGAAATACCTTAAACCACATCATCGCAAAGAATCACACTCTGTAACGTTCTTCATTGGTCTATTCACTGGGTGTTTCATTGCACTCTTTGCTGGATATGTCATTATGGCTCATATTACTGGGTTGTACAGAAGGCAACCAAATTCTATATACATGGAAACTGCCTACCCTATACTCAGCATGTTCAGCCTATTGTTTCTACACTTCTTCCTATACGGTTGTAACATTTTCGCGTGGAGAAAGACTCGTATAAATTACAGTTTCATCTTTGAACTATCCCCAACAAAGGAGCTGAAGTACAGAGATGTGTTCTTGATCTGTACTACATCAATGACTGTCGTGGTTGGGGTCATGTTTCTTCATTTGTTCTTGCTAACAAAAGGATATTCATACACCCAAGTTCGAGCAATCCCCGGTCTTCTACTGCTGATGTTTCTACTAATACTTGTGTGCCCCTTCAACATCATCTACAAATCAAGCCGTTTTCGTCTTCTTCGTGTGATAAGAAATATCATTTTGTCACCTCTGTACAAGGTGGTCATGCTAGACTTCTTCATGGCAGACCAACTTTGTAGTCAGGTTCCGATGCTTAGGAACCTCGAGTATGTGGCATGTTACTACATAACTGGAAGCTACAAAACTCAGGACTATGGCTATTGCATGAGGGCCACGCATTACCGCGATCTTGCTTATGCCGTGTCCTTCCTGCCCTATTACTGGAGGGCAATGCAGTGTGCTAGGAGGTGGTTTGATGAGGGGCAGACGAGCCACCTGGTCAATCTCGGCAAATATGTGTCTGCAATGCTAGCAGCAGGAACAAAAGTGGCTTATGAGAAGGAAAAGAGTGTTGGATGGCTCTGTCTGGTTGTGGTCATGTCAACTTTTGCAACAGTGTACCAATTGTATTGGGACTTTGTAAAGGATTGGGGTTTGCTTCAAATGAATTCCAAGAATCCTTTGCTTAGGAATGAATTAATGCTTCGCCAAAAGATCATTTACTACTTCTCAATGGGATTAAACCTTGTTCTCAGGCTAGCTTGGTTGCAAACTGTTCTTCATTCAAGTTTTGGACATGTGGACTACAGAGTAACAGGGCTATTTTTAGCAGCCCTTGAAGTCATTAGAAGAGGGTTATGGAACTTTTACAGGTTGGAGAATGAGCATCTAAATAATGCTGGGAAGTTTAGAGCAGTTAAAACAGTACCACTTCCTTTTCATGAAGTGGATGAGGAAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0006950 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0012505 GO:0015698 GO:0016020 GO:0016036 GO:0031667 GO:0031668 GO:0031669 GO:0031984 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0071496 GO:0071944 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

826

Amino Acids

96.16

Weight (kDa)

9.17

Isoelectric Point (pI)

42.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	35 - 380	2.9e-65	SPX domain
EXS	PF03124	470 - 803	6.2e-99	EXS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011751)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68740 AT1G68740
fragaria_vesca	FvH4_4g28410
malus_domestica	MD13G1049800.v1.1 MD16G1050800.v1.1
prunus_persica	Prupe.1G301900_v2.0.a1
pyrus_communis	pycom13g04410 pycom13g04420 pycom16g04450
rosa_chinensis	RchiOBHm_Chr4g0436361
rosa_laevigata	RLG00000006525
rosa_multiflora	Rmu_sc0006449.1_g000007
rosa_roxburghii	Rroxscaffold_5G00377530
rosa_rugosa	Rorug04G0293300
rosa_samantha	Rh4AG347500 Rh4BG356300 Rh4CG370900 Rh4DG350000
rosa_wichuraiana	Rw4G030380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1073
AasI	GACNNNNNNGTC	1 cut(s)	859
AccII	CGCG	3 cut(s)	567, 1475, 1923
AciI	CCGC	3 cut(s)	549, 674, 1921
AclI	AACGTT	1 cut(s)	1289
AclWI	GGATC	1 cut(s)	192
AcoI	YGGCCR	1 cut(s)	298
AcsI	RAATTY	2 cut(s)	1384, 2185
AcuI	CTGAAG	4 cut(s)	741, 918, 1242, 1556
AdeI	CACNNNGTG	1 cut(s)	1314
AfaI	GTAC	9 cut(s)	374, 931, 1019, 1370, 1541, 1564, 1772, 2138, 2445
AfiI	CCNNNNNNNGG	5 cut(s)	478, 734, 1237, 1528, 1959
AflII	CTTAAG	1 cut(s)	80
AflIII	ACRYGT	3 cut(s)	328, 369, 2314
AhlI	ACTAGT	1 cut(s)	133
AjnI	CCWGG	1 cut(s)	2013
AjuI	GAANNNNNNNTTGG	2 cut(s)	2073, 2105
AloI	GAACNNNNNNTCC	2 cut(s)	473, 505
Alw21I	GWGCWC	1 cut(s)	543
Alw26I	GTCTC	1 cut(s)	360
AlwI	GGATC	1 cut(s)	192
Ama87I	CYCGRG	1 cut(s)	1841
AoxI	GGCC	3 cut(s)	298, 1239, 1908
ApeKI	GCWGC	5 cut(s)	413, 710, 952, 2051, 2348
ApoI	RAATTY	2 cut(s)	1384, 2185
AseI	ATTAAT	1 cut(s)	2216
Asp700I	GAANNNNTTC	2 cut(s)	464, 488
AspLEI	GCGC	3 cut(s)	567, 569, 797
AspS9I	GGNCC	2 cut(s)	439, 1908
AsuC2I	CCSGG	1 cut(s)	1656
AsuHPI	GGTGA	4 cut(s)	115, 469, 757, 1755
AsuNHI	GCTAGC	2 cut(s)	2047, 2275
AvaI	CYCGRG	1 cut(s)	1841
AvaII	GGWCC	1 cut(s)	439
BaeGI	GKGCMC	1 cut(s)	1697
BalI	TGGCCA	1 cut(s)	300
BanII	GRGCYC	1 cut(s)	543
BbsI	GAAGAC	3 cut(s)	1233, 1652, 1724
Bbv12I	GWGCWC	1 cut(s)	543
BbvI	GCAGC	5 cut(s)	400, 722, 939, 2063, 2360
BccI	CCATC	5 cut(s)	94, 207, 309, 517, 2088
BceAI	ACGGC	3 cut(s)	789, 1707, 1922
BcgI	CGANNNNNNTGC	2 cut(s)	380, 414
BciT130I	CCWGG	1 cut(s)	2015
BclI	TGATCA	1 cut(s)	993
BcnI	CCSGG	1 cut(s)	1656
BcoDI	GTCTC	1 cut(s)	360
BcuI	ACTAGT	1 cut(s)	133
BfaI	CTAG	7 cut(s)	134, 905, 1181, 1787, 1980, 2048, 2276
BfmI	CTRYAG	2 cut(s)	1045, 2323
BfoI	RGCGCY	1 cut(s)	798
BfrI	CTTAAG	1 cut(s)	80
BglII	AGATCT	1 cut(s)	901
BisI	GCNGC	6 cut(s)	414, 674, 711, 953, 2052, 2349
BlsI	GCNGC	6 cut(s)	415, 675, 712, 954, 2053, 2350
Bme1390I	CCNGG	2 cut(s)	1656, 2015
Bme18I	GGWCC	1 cut(s)	439
BmeT110I	CYCGRG	1 cut(s)	1841
BmgT120I	GGNCC	2 cut(s)	439, 1908
BmiI	GGNNCC	2 cut(s)	1824, 1838
BmrFI	CCNGG	2 cut(s)	1656, 2015
BmrI	ACTGGG	2 cut(s)	1320, 1371
BmsI	GCATC	6 cut(s)	142, 400, 590, 985, 1818, 2413
BmtI	GCTAGC	2 cut(s)	2051, 2279
BmuI	ACTGGG	2 cut(s)	1320, 1371
BpiI	GAAGAC	3 cut(s)	1233, 1652, 1724
BplI	GAGNNNNNCTC	6 cut(s)	593, 625, 626, 658, 1471, 1503
BpmI	CTGGAG	1 cut(s)	1981
Bpu10I	CCTNAGC	3 cut(s)	588, 1832, 2204
BpuEI	CTTGAG	3 cut(s)	161, 532, 784
BpuMI	CCSGG	1 cut(s)	1656
BsaJI	CCNNGG	4 cut(s)	18, 597, 820, 1654
BsaXI	ACNNNNNCTCC	6 cut(s)	473, 503, 993, 1023, 1523, 1553
Bsc4I	CCNNNNNNNGG	5 cut(s)	478, 734, 1237, 1528, 1959
Bse1I	ACTGG	5 cut(s)	173, 1315, 1366, 1873, 1964
Bse3DI	GCAATG	3 cut(s)	1320, 1974, 2049
BseBI	CCWGG	1 cut(s)	2015
BseDI	CCNNGG	4 cut(s)	18, 597, 820, 1654
BseGI	GGATG	2 cut(s)	2099, 2473
BseLI	CCNNNNNNNGG	5 cut(s)	478, 734, 1237, 1528, 1959
BseMI	GCAATG	3 cut(s)	1320, 1974, 2049
BseMII	CTCAG	8 cut(s)	602, 624, 779, 888, 1176, 1432, 1898, 2284
BseNI	ACTGG	5 cut(s)	173, 1315, 1366, 1873, 1964
BsePI	GCGCGC	1 cut(s)	565
BseRI	GAGGAG	4 cut(s)	650, 805, 1014, 1211
BseSI	GKGCMC	1 cut(s)	1697
BseXI	GCAGC	5 cut(s)	400, 722, 939, 2063, 2360
BseYI	CCCAGC	1 cut(s)	2417
BsgI	GTGCAG	1 cut(s)	938
Bsh1236I	CGCG	3 cut(s)	567, 1475, 1923
BshFI	GGCC	3 cut(s)	300, 1241, 1910
BsiHKAI	GWGCWC	1 cut(s)	543
BsiHKCI	CYCGRG	1 cut(s)	1841
BsiSI	CCGG	1 cut(s)	1656
BslFI	GGGAC	2 cut(s)	710, 2165
BslI	CCNNNNNNNGG	5 cut(s)	478, 734, 1237, 1528, 1959
BsmAI	GTCTC	1 cut(s)	360
BsmFI	GGGAC	2 cut(s)	710, 2165
BsmI	GAATGC	1 cut(s)	155
BsnI	GGCC	3 cut(s)	300, 1241, 1910
BsoBI	CYCGRG	1 cut(s)	1841
Bsp1286I	GDGCHC	2 cut(s)	543, 1697
Bsp1407I	TGTACA	3 cut(s)	1017, 1368, 1770
Bsp143I	GATC	6 cut(s)	184, 901, 993, 1557, 1924, 2232
Bsp19I	CCATGG	1 cut(s)	18
BspACI	CCGC	3 cut(s)	549, 674, 1921
BspANI	GGCC	3 cut(s)	300, 1241, 1910
BspCNI	CTCAG	8 cut(s)	601, 625, 780, 887, 1175, 1431, 1897, 2283
BspFNI	CGCG	3 cut(s)	567, 1475, 1923
BspHI	TCATGA	1 cut(s)	2458
BspLI	GGNNCC	2 cut(s)	1824, 1838
BspOI	GCTAGC	2 cut(s)	2051, 2279
BspPI	GGATC	1 cut(s)	192
BspTI	CTTAAG	1 cut(s)	80
BsrDI	GCAATG	3 cut(s)	1320, 1974, 2049
BsrGI	TGTACA	3 cut(s)	1017, 1368, 1770
BsrI	ACTGG	5 cut(s)	173, 1315, 1366, 1873, 1964
BssECI	CCNNGG	4 cut(s)	18, 597, 820, 1654
BssHII	GCGCGC	1 cut(s)	565
BssMI	GATC	6 cut(s)	184, 901, 993, 1557, 1924, 2232
BssT1I	CCWWGG	3 cut(s)	18, 597, 820
Bst2UI	CCWGG	1 cut(s)	2015
Bst4CI	ACNGT	7 cut(s)	861, 1460, 1502, 1579, 2134, 2293, 2443
Bst6I	CTCTTC	2 cut(s)	272, 2362
BstAFI	CTTAAG	1 cut(s)	80
BstAPI	GCANNNNNTGC	1 cut(s)	1331
BstAUI	TGTACA	3 cut(s)	1017, 1368, 1770
BstC8I	GCNNGC	7 cut(s)	345, 358, 433, 567, 1065, 2049, 2277
BstDSI	CCRYGG	1 cut(s)	18
BstF5I	GGATG	2 cut(s)	2099, 2473
BstFNI	CGCG	3 cut(s)	567, 1475, 1923
BstH2I	RGCGCY	1 cut(s)	798
BstHHI	GCGC	3 cut(s)	567, 569, 797
BstKTI	GATC	6 cut(s)	187, 904, 996, 1560, 1927, 2235
BstMAI	GTCTC	1 cut(s)	360
BstMBI	GATC	6 cut(s)	184, 901, 993, 1557, 1924, 2232
BstMWI	GCNNNNNNNGC	5 cut(s)	353, 801, 1331, 1428, 2048
BstNI	CCWGG	1 cut(s)	2015
BstNSI	RCATGY	7 cut(s)	332, 373, 435, 1063, 1426, 1857, 2318
BstSCI	CCNGG	2 cut(s)	1654, 2013
BstSFI	CTRYAG	2 cut(s)	1045, 2323
BstSLI	GKGCMC	1 cut(s)	1697
BstUI	CGCG	3 cut(s)	567, 1475, 1923
BstV1I	GCAGC	5 cut(s)	400, 722, 939, 2063, 2360
BstV2I	GAAGAC	3 cut(s)	1233, 1652, 1724
BstX2I	RGATCY	2 cut(s)	184, 901
BstYI	RGATCY	2 cut(s)	184, 901
BsuRI	GGCC	3 cut(s)	300, 1241, 1910
BtgI	CCRYGG	1 cut(s)	18
BtgZI	GCGATG	1 cut(s)	1250
BtsCI	GGATG	2 cut(s)	2099, 2473
BtsI	GCAGTG	1 cut(s)	1979
BtsIMutI	CAGTG	4 cut(s)	717, 1308, 1979, 2139
Cac8I	GCNNGC	7 cut(s)	345, 358, 433, 567, 1065, 2049, 2277
CciI	TCATGA	1 cut(s)	2458
CfoI	GCGC	3 cut(s)	567, 569, 797
Cfr13I	GGNCC	2 cut(s)	439, 1908
CsiI	ACCWGGT	1 cut(s)	2013
Csp6I	GTAC	9 cut(s)	373, 930, 1018, 1369, 1540, 1563, 1771, 2137, 2444
CviQI	GTAC	9 cut(s)	373, 930, 1018, 1369, 1540, 1563, 1771, 2137, 2444
DpnI	GATC	6 cut(s)	186, 903, 995, 1559, 1926, 2234
DpnII	GATC	6 cut(s)	184, 901, 993, 1557, 1924, 2232
DraI	TTTAAA	1 cut(s)	1083
DraIII	CACNNNGTG	1 cut(s)	1314
DrdI	GACNNNNNNGTC	1 cut(s)	859
DseDI	GACNNNNNNGTC	1 cut(s)	859
EaeI	YGGCCR	1 cut(s)	298
Eam1104I	CTCTTC	2 cut(s)	272, 2362
EarI	CTCTTC	2 cut(s)	272, 2362
Ecl136II	GAGCTC	1 cut(s)	541
Eco130I	CCWWGG	3 cut(s)	18, 597, 820
Eco24I	GRGCYC	1 cut(s)	543
Eco32I	GATATC	1 cut(s)	1034
Eco47I	GGWCC	1 cut(s)	439
Eco53kI	GAGCTC	1 cut(s)	541
Eco57I	CTGAAG	4 cut(s)	741, 918, 1242, 1556
Eco88I	CYCGRG	1 cut(s)	1841
EcoICRI	GAGCTC	1 cut(s)	541
EcoRI	GAATTC	1 cut(s)	2185
EcoRII	CCWGG	1 cut(s)	2013
EcoRV	GATATC	1 cut(s)	1034
EcoT14I	CCWWGG	3 cut(s)	18, 597, 820
EcoT22I	ATGCAT	1 cut(s)	157
EcoT38I	GRGCYC	1 cut(s)	543
ErhI	CCWWGG	3 cut(s)	18, 597, 820
FalI	AAGNNNNNCTT	2 cut(s)	793, 825
FaqI	GGGAC	2 cut(s)	710, 2165
FbaI	TGATCA	1 cut(s)	993
Fnu4HI	GCNGC	6 cut(s)	414, 674, 711, 953, 2052, 2349
FokI	GGATG	1 cut(s)	2106
FriOI	GRGCYC	1 cut(s)	543
Fsp4HI	GCNGC	6 cut(s)	414, 674, 711, 953, 2052, 2349
FspBI	CTAG	7 cut(s)	134, 905, 1181, 1787, 1980, 2048, 2276
GlaI	GCGC	3 cut(s)	566, 568, 796
GluI	GCNGC	6 cut(s)	414, 674, 711, 953, 2052, 2349
GsaI	CCCAGC	1 cut(s)	2421
GsuI	CTGGAG	1 cut(s)	1981
HaeII	RGCGCY	1 cut(s)	798
HaeIII	GGCC	3 cut(s)	300, 1241, 1910
HapII	CCGG	1 cut(s)	1656
HhaI	GCGC	3 cut(s)	567, 569, 797
Hin6I	GCGC	3 cut(s)	565, 567, 795
HinP1I	GCGC	3 cut(s)	565, 567, 795
HincII	GTYRAC	1 cut(s)	2121
HindII	GTYRAC	1 cut(s)	2121
HindIII	AAGCTT	1 cut(s)	341
HinfI	GANTC	7 cut(s)	460, 593, 641, 1177, 1274, 1486, 2194
HpaII	CCGG	1 cut(s)	1656
HphI	GGTGA	4 cut(s)	115, 469, 757, 1755
Hpy166II	GTNNAC	5 cut(s)	334, 1206, 2121, 2137, 2320
Hpy188I	TCNGA	6 cut(s)	634, 852, 937, 998, 1165, 1827
Hpy188III	TCNNGA	6 cut(s)	140, 178, 590, 1555, 1886, 2459
Hpy8I	GTNNAC	5 cut(s)	334, 1206, 2121, 2137, 2320
HpyCH4III	ACNGT	7 cut(s)	861, 1460, 1502, 1579, 2134, 2293, 2443
HpyCH4IV	ACGT	1 cut(s)	1289
HpyF10VI	GCNNNNNNNGC	5 cut(s)	353, 801, 1331, 1428, 2048
HpySE526I	ACGT	1 cut(s)	1289
HspAI	GCGC	3 cut(s)	565, 567, 795
Ksp22I	TGATCA	1 cut(s)	993
Kzo9I	GATC	6 cut(s)	184, 901, 993, 1557, 1924, 2232
LmnI	GCTCC	5 cut(s)	578, 792, 1001, 1198, 1531
Lsp1109I	GCAGC	5 cut(s)	400, 722, 939, 2063, 2360
LweI	GCATC	6 cut(s)	142, 400, 590, 985, 1818, 2413
MabI	ACCWGGT	1 cut(s)	2013
MaeI	CTAG	7 cut(s)	134, 905, 1181, 1787, 1980, 2048, 2276
MaeII	ACGT	1 cut(s)	1289
MaeIII	GTNAC	6 cut(s)	861, 1285, 1463, 1761, 1856, 2329
MalI	GATC	6 cut(s)	186, 903, 995, 1559, 1926, 2234
MboI	GATC	6 cut(s)	184, 901, 993, 1557, 1924, 2232
MfeI	CAATTG	1 cut(s)	2141
MflI	RGATCY	2 cut(s)	184, 901
MhlI	GDGCHC	2 cut(s)	543, 1697
MlsI	TGGCCA	1 cut(s)	300
MluCI	AATT	8 cut(s)	119, 383, 740, 1384, 1495, 2141, 2185, 2213
MluNI	TGGCCA	1 cut(s)	300
MlyI	GAGTC	3 cut(s)	587, 635, 1480
MmeI	TCCRAC	3 cut(s)	672, 2071, 2373
Mox20I	TGGCCA	1 cut(s)	300
Mph1103I	ATGCAT	1 cut(s)	157
MroXI	GAANNNNTTC	2 cut(s)	464, 488
MscI	TGGCCA	1 cut(s)	300
Msp20I	TGGCCA	1 cut(s)	300
MspCI	CTTAAG	1 cut(s)	80
MspI	CCGG	1 cut(s)	1656
MspR9I	CCNGG	2 cut(s)	1656, 2015
MunI	CAATTG	1 cut(s)	2141
Mva1269I	GAATGC	1 cut(s)	155
MvaI	CCWGG	1 cut(s)	2015
MvnI	CGCG	3 cut(s)	567, 1475, 1923
MwoI	GCNNNNNNNGC	5 cut(s)	353, 801, 1331, 1428, 2048
NciI	CCSGG	1 cut(s)	1656
NcoI	CCATGG	1 cut(s)	18
NdeII	GATC	6 cut(s)	184, 901, 993, 1557, 1924, 2232
NheI	GCTAGC	2 cut(s)	2047, 2275
NlaIV	GGNNCC	2 cut(s)	1824, 1838
NmeAIII	GCCGAG	2 cut(s)	47, 2004
NmuCI	GTSAC	2 cut(s)	861, 1761
NsiI	ATGCAT	1 cut(s)	157
NspI	RCATGY	7 cut(s)	332, 373, 435, 1063, 1426, 1857, 2318
PaeI	GCATGC	1 cut(s)	435
PaeR7I	CTCGAG	1 cut(s)	1841
PagI	TCATGA	1 cut(s)	2458
PauI	GCGCGC	1 cut(s)	565
PciI	ACATGT	3 cut(s)	328, 369, 2314
PcsI	WCGNNNNNNNCGW	1 cut(s)	1735
PctI	GAATGC	1 cut(s)	155
PdmI	GAANNNNTTC	2 cut(s)	464, 488
PfeI	GAWTC	4 cut(s)	460, 1177, 1274, 2194
PkrI	GCNGC	6 cut(s)	415, 675, 712, 954, 2053, 2350
PleI	GAGTC	3 cut(s)	587, 635, 1480
PpsI	GAGTC	3 cut(s)	587, 635, 1480
PscI	ACATGT	3 cut(s)	328, 369, 2314
PshBI	ATTAAT	1 cut(s)	2216
PsiI	TTATAA	1 cut(s)	1073
Psp124BI	GAGCTC	1 cut(s)	543
Psp1406I	AACGTT	1 cut(s)	1289
Psp6I	CCWGG	1 cut(s)	2013
PspFI	CCCAGC	1 cut(s)	2417
PspGI	CCWGG	1 cut(s)	2013
PspN4I	GGNNCC	2 cut(s)	1824, 1838
PspPI	GGNCC	2 cut(s)	439, 1908
PspXI	VCTCGAGB	1 cut(s)	1841
PsuI	RGATCY	2 cut(s)	184, 901
PteI	GCGCGC	1 cut(s)	565
RsaI	GTAC	9 cut(s)	374, 931, 1019, 1370, 1541, 1564, 1772, 2138, 2445
RsaNI	GTAC	9 cut(s)	373, 930, 1018, 1369, 1540, 1563, 1771, 2137, 2444
SacI	GAGCTC	1 cut(s)	543
SatI	GCNGC	6 cut(s)	414, 674, 711, 953, 2052, 2349
Sau3AI	GATC	6 cut(s)	184, 901, 993, 1557, 1924, 2232
Sau96I	GGNCC	2 cut(s)	439, 1908
SchI	GAGTC	3 cut(s)	587, 635, 1480
ScrFI	CCNGG	2 cut(s)	1656, 2015
SduI	GDGCHC	2 cut(s)	543, 1697
SexAI	ACCWGGT	1 cut(s)	2013
SfaNI	GCATC	6 cut(s)	142, 400, 590, 985, 1818, 2413
SfcI	CTRYAG	2 cut(s)	1045, 2323
Sfr274I	CTCGAG	1 cut(s)	1841
SinI	GGWCC	1 cut(s)	439
SlaI	CTCGAG	1 cut(s)	1841
SmlI	CTYRAG	5 cut(s)	80, 176, 511, 799, 1841
SmoI	CTYRAG	5 cut(s)	80, 176, 511, 799, 1841
SpeI	ACTAGT	1 cut(s)	133
SphI	GCATGC	1 cut(s)	435
Sse9I	AATT	8 cut(s)	119, 383, 740, 1384, 1495, 2141, 2185, 2213
SsiI	CCGC	3 cut(s)	549, 674, 1921
SspI	AATATT	1 cut(s)	211
SspMI	CTAG	7 cut(s)	134, 905, 1181, 1787, 1980, 2048, 2276
SstI	GAGCTC	1 cut(s)	543
StyD4I	CCNGG	2 cut(s)	1654, 2013
StyI	CCWWGG	3 cut(s)	18, 597, 820
TaaI	ACNGT	7 cut(s)	861, 1460, 1502, 1579, 2134, 2293, 2443
TaiI	ACGT	1 cut(s)	1292
TaqI	TCGA	5 cut(s)	8, 123, 390, 1645, 1842
TaqII	GACCGA	1 cut(s)	1245
TasI	AATT	8 cut(s)	119, 383, 740, 1384, 1495, 2141, 2185, 2213
TatI	WGTACW	6 cut(s)	929, 1017, 1368, 1539, 1562, 1770
TauI	GCSGC	1 cut(s)	676
TfiI	GAWTC	4 cut(s)	460, 1177, 1274, 2194
TscAI	CASTG	4 cut(s)	724, 1315, 1979, 2139
TseFI	GTSAC	2 cut(s)	861, 1761
TseI	GCWGC	5 cut(s)	413, 710, 952, 2051, 2348
Tsp45I	GTSAC	2 cut(s)	861, 1761
TspRI	CASTG	4 cut(s)	724, 1315, 1979, 2139
Vha464I	CTTAAG	1 cut(s)	80
VpaK11BI	GGWCC	1 cut(s)	439
VspI	ATTAAT	1 cut(s)	2216
XapI	RAATTY	2 cut(s)	1384, 2185
XceI	RCATGY	7 cut(s)	332, 373, 435, 1063, 1426, 1857, 2318
XhoI	CTCGAG	1 cut(s)	1841
XmnI	GAANNNNTTC	2 cut(s)	464, 488
XspI	CTAG	7 cut(s)	134, 905, 1181, 1787, 1980, 2048, 2276
Zsp2I	ATGCAT	1 cut(s)	157

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.