Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0011751

Physical Location & Seq

Genomic Coordinates Forward (+)

57119100 .. 57124032

Gene Structure 4933 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G030380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

ATGGTGAAGTTCTCTAAGCAATTCGAGGCACAACTAGTTCCCGAATGGAAAGATGCATTCGTAGATTACTGGCAACTCAAGAAGGATCTCAAAAAAATCCATCTCCTTAATATTAACAACAACAACACACCTACTCATAATAGCTCTTTATCTAACACTCTCTTCACATCTATAAAGAAGTTATCTTTATTTGGCCATCAACACAGAGAACATGAACTCATACATGTTCACAAGAAGCTTGCCTCATCAGCAAGCAAGGGAGACATGTACGAAACTGAATTGTTCGAGCAACTTGCTGATACTGATGCTGCGAAAGAGTTTTTTGCATGCTTGGACCTTCAACTCAACAAGGTGAATCAGTTCTACCAGAAAAAGGAGAAAGAGTTCATGGAGAGAGGGCAGTCCTTGAGGAAGCAGATGGATATACTCATTGAGCTCAAAACCGCTTTCAAGCAACAGCGCGCCAAAGGTGGAGCATCTGCTCAGGACTCCAAGGAAGAAGCCTCTATCTCATGCACCTTCTCATCTGAGGAGGACTCTGTGAAGGGCAAAACGGAACTTGAACAGCCGCAAGAAACAGATGAGTTGGAGAAAAATGATGAAGTAGCCTACACAGAAGTCCCAATATCAGGCGAATTGGTGAAACCAATAAGAATGAAAAGTGAGGATATTGGGAAACAACTGAGGAGCGCCTCAAGCCGTTCTTTCACAATCAGTTATTTAGTTTGGGAAGATCTAGTTAATCAGTCCTCAAAGAAATGTACTTCAGAAGGCATGAGTAAGCTGCACATCAACAAAACCAAGTTGCATCATGCAGATAAGATGATCAGAGGAGCTTTTGTTGAGCTGTACAAAGGCTTGGGATATCTCAAAACCTACAGGAACTTGAACATGCTTGCTTTTATAAAGATTTTAAAGAAGTTTGACAAGGCGACTGAAAAACAAGTGCTTCCAATCTATCTAAAAGTTGTTGAGAGTTCCTATTTCAACAGCTCAGATAAGGTTATGAATCTAGCAGATGAAGTTGAGGAGCTGTTTACCAAACACTTCGCTGAAGAAGACCGAAGAAAGGCCATGAAATACCTTAAACCACATCATCGCAAAGAATCACACTCTGTAACGTTCTTCATTGGTCTATTCACTGGGTGTTTCATTGCACTCTTTGCTGGATATGTCATTATGGCTCATATTACTGGGTTGTACAGAAGGCAACCAAATTCTATATACATGGAAACTGCCTACCCTATACTCAGCATGTTCAGCCTATTGTTTCTACACTTCTTCCTATACGGTTGTAACATTTTTGCGTGGAGAAAGACTCGTATAAATTACAGTTTCATCTTTGAACTATCCCCAACAAAGGAGCTGAAGTACAGAGATGTGTTCTTGATCTGTACTACATCAATGACTGTCGTGGTTGGGGTCATGTTTCTTCATTTGTTTTTGCTAACAAAAGGATATTCATACACCCAAGTTCGAGCAATCCCCGGTCTTCTACTGCTGATGTTTCTACTAATACTTGTGTGCCCCTTCAACATCATCTACAAATCAAGCCGTTGTCGTCTTCTTCGTGTGATAAGAAATATCATTTTGTCACCTCTGTACAAGGTTGTCATGCTAGACTTCTTCATGGCAGACCAACTTTGTAGTCAGGTTCCGATGCTTAGGAACCTCGAGTATGTGGCATGTTACTACATAACTGGAAGCTACAAAACTCAGGACTATGGCTATTGCATGAGGGCCACGCATTACCGCGATCTTGCTTATGCCGTGTCCTTCCTGCCCTATTACTGGAGGGCAATGCAGTGTGCTAGGAGGTGGTTTGATGAGGGGCAGACGAGCCACCTGGTCAATCTCGGCAAATATGTGTCTGCAATGCTAGCAGCAGGAACAAAAGTGGCTTATGAGAAGGAAAAGAGTGTTGGATGGCTCTGTCTGGTTGTGGTCATGTCAACTTTTGCAACAGTGTACCAATTGTATTGGGACTTTGTAAAGGATTGGGGTTTGCTTCAAATGAATTCCAAGAATCCTTTGCTTAGGAATGAATTAATGCTTCGCCAAAAGATCATTTACTACTTCTCAATGGGATTAAACCTTGTTCTCAGGCTGGCTTGGTTGCAAACTGTTCTTCATTCAAGTTTTGGACATGTGGACTACAGAGTAACAGGGCTATTTTTAGCAGCCCTTGAAGTCATTAGAAGAGGGTTATGGAACTTTTACAGGTTGGAGAATGAGCATCTAAATAATGCTGGGAAGTTTAGAGCAGTTAAAACAGTACCACTTCCTTTTCATGAAGTGGATGAGGAAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0006950 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0012505 GO:0015698 GO:0016020 GO:0016036 GO:0031667 GO:0031668 GO:0031669 GO:0031984 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0071496 GO:0071944 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

770

Amino Acids

89.75

Weight (kDa)

9.1

Isoelectric Point (pI)

41.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	2 - 324	8.2e-63	SPX domain
EXS	PF03124	414 - 747	2e-98	EXS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011751)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68740 AT1G68740
fragaria_vesca	FvH4_4g28410
malus_domestica	MD13G1049800.v1.1 MD16G1050800.v1.1
prunus_persica	Prupe.1G301900_v2.0.a1
pyrus_communis	pycom13g04410 pycom13g04420 pycom16g04450
rosa_chinensis	RchiOBHm_Chr4g0436361
rosa_laevigata	RLG00000006525
rosa_multiflora	Rmu_sc0006449.1_g000007
rosa_roxburghii	Rroxscaffold_5G00377530
rosa_rugosa	Rorug04G0293300
rosa_samantha	Rh4AG347500 Rh4BG356300 Rh4CG370900 Rh4DG350000
rosa_wichuraiana	Rw4G030380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	905
AccII	CGCG	2 cut(s)	462, 1755
AciI	CCGC	3 cut(s)	444, 569, 1753
AclI	AACGTT	1 cut(s)	1121
AclWI	GGATC	1 cut(s)	93
AcoI	YGGCCR	1 cut(s)	193
AcsI	RAATTY	2 cut(s)	1216, 2017
AcuI	CTGAAG	3 cut(s)	750, 1074, 1388
AdeI	CACNNNGTG	1 cut(s)	1146
AfaI	GTAC	9 cut(s)	269, 763, 851, 1202, 1373, 1396, 1604, 1970, 2277
AfiI	CCNNNNNNNGG	5 cut(s)	373, 629, 1069, 1360, 1791
AflIII	ACRYGT	3 cut(s)	223, 264, 2146
AhlI	ACTAGT	1 cut(s)	34
AjnI	CCWGG	1 cut(s)	1845
AjuI	GAANNNNNNNTTGG	2 cut(s)	1905, 1937
AloI	GAACNNNNNNTCC	2 cut(s)	368, 400
Alw21I	GWGCWC	1 cut(s)	438
Alw26I	GTCTC	1 cut(s)	255
AlwI	GGATC	1 cut(s)	93
Ama87I	CYCGRG	1 cut(s)	1673
AoxI	GGCC	3 cut(s)	193, 1071, 1740
ApeKI	GCWGC	4 cut(s)	308, 784, 1883, 2180
ApoI	RAATTY	2 cut(s)	1216, 2017
AseI	ATTAAT	1 cut(s)	2048
Asp700I	GAANNNNTTC	2 cut(s)	359, 383
AspLEI	GCGC	3 cut(s)	462, 464, 692
AspS9I	GGNCC	2 cut(s)	334, 1740
AsuC2I	CCSGG	1 cut(s)	1488
AsuHPI	GGTGA	4 cut(s)	16, 364, 652, 1587
AsuNHI	GCTAGC	1 cut(s)	1879
AvaI	CYCGRG	1 cut(s)	1673
AvaII	GGWCC	1 cut(s)	334
BaeGI	GKGCMC	1 cut(s)	1529
BalI	TGGCCA	1 cut(s)	195
BanII	GRGCYC	1 cut(s)	438
BbsI	GAAGAC	3 cut(s)	1065, 1484, 1556
Bbv12I	GWGCWC	1 cut(s)	438
BbvI	GCAGC	4 cut(s)	295, 771, 1895, 2192
BccI	CCATC	4 cut(s)	108, 204, 412, 1920
BceAI	ACGGC	3 cut(s)	684, 1539, 1754
BcgI	CGANNNNNNTGC	2 cut(s)	275, 309
BciT130I	CCWGG	1 cut(s)	1847
BclI	TGATCA	1 cut(s)	825
BcnI	CCSGG	1 cut(s)	1488
BcoDI	GTCTC	1 cut(s)	255
BcuI	ACTAGT	1 cut(s)	34
BfaI	CTAG	6 cut(s)	35, 737, 1013, 1619, 1812, 1880
BfmI	CTRYAG	2 cut(s)	877, 2155
BfoI	RGCGCY	1 cut(s)	693
BglII	AGATCT	1 cut(s)	733
BisI	GCNGC	5 cut(s)	309, 569, 785, 1884, 2181
BlsI	GCNGC	5 cut(s)	310, 570, 786, 1885, 2182
Bme1390I	CCNGG	2 cut(s)	1488, 1847
Bme18I	GGWCC	1 cut(s)	334
BmeT110I	CYCGRG	1 cut(s)	1673
BmgT120I	GGNCC	2 cut(s)	334, 1740
BmiI	GGNNCC	2 cut(s)	1656, 1670
BmrFI	CCNGG	2 cut(s)	1488, 1847
BmrI	ACTGGG	2 cut(s)	1152, 1203
BmsI	GCATC	6 cut(s)	43, 295, 485, 817, 1650, 2245
BmtI	GCTAGC	1 cut(s)	1883
BmuI	ACTGGG	2 cut(s)	1152, 1203
BpiI	GAAGAC	3 cut(s)	1065, 1484, 1556
BplI	GAGNNNNNCTC	4 cut(s)	521, 553, 1303, 1335
BpmI	CTGGAG	1 cut(s)	1813
Bpu10I	CCTNAGC	3 cut(s)	483, 1664, 2036
BpuEI	CTTGAG	3 cut(s)	62, 427, 679
BpuMI	CCSGG	1 cut(s)	1488
BsaJI	CCNNGG	2 cut(s)	492, 1486
BsaXI	ACNNNNNCTCC	6 cut(s)	368, 398, 825, 855, 1355, 1385
Bsc4I	CCNNNNNNNGG	5 cut(s)	373, 629, 1069, 1360, 1791
Bse1I	ACTGG	5 cut(s)	74, 1147, 1198, 1705, 1796
Bse3DI	GCAATG	3 cut(s)	1152, 1806, 1881
BseBI	CCWGG	1 cut(s)	1847
BseDI	CCNNGG	2 cut(s)	492, 1486
BseGI	GGATG	2 cut(s)	1931, 2305
BseLI	CCNNNNNNNGG	5 cut(s)	373, 629, 1069, 1360, 1791
BseMI	GCAATG	3 cut(s)	1152, 1806, 1881
BseMII	CTCAG	7 cut(s)	497, 519, 674, 1008, 1264, 1730, 2116
BseNI	ACTGG	5 cut(s)	74, 1147, 1198, 1705, 1796
BsePI	GCGCGC	1 cut(s)	460
BseRI	GAGGAG	4 cut(s)	545, 700, 846, 1043
BseSI	GKGCMC	1 cut(s)	1529
BseXI	GCAGC	4 cut(s)	295, 771, 1895, 2192
BseYI	CCCAGC	1 cut(s)	2249
BsgI	GTGCAG	1 cut(s)	770
Bsh1236I	CGCG	2 cut(s)	462, 1755
BshFI	GGCC	3 cut(s)	195, 1073, 1742
BsiHKAI	GWGCWC	1 cut(s)	438
BsiHKCI	CYCGRG	1 cut(s)	1673
BsiSI	CCGG	1 cut(s)	1488
BslFI	GGGAC	2 cut(s)	605, 1997
BslI	CCNNNNNNNGG	5 cut(s)	373, 629, 1069, 1360, 1791
BsmAI	GTCTC	1 cut(s)	255
BsmFI	GGGAC	2 cut(s)	605, 1997
BsmI	GAATGC	1 cut(s)	56
BsnI	GGCC	3 cut(s)	195, 1073, 1742
BsoBI	CYCGRG	1 cut(s)	1673
Bsp1286I	GDGCHC	2 cut(s)	438, 1529
Bsp1407I	TGTACA	3 cut(s)	849, 1200, 1602
Bsp143I	GATC	6 cut(s)	85, 733, 825, 1389, 1756, 2064
BspACI	CCGC	3 cut(s)	444, 569, 1753
BspANI	GGCC	3 cut(s)	195, 1073, 1742
BspCNI	CTCAG	7 cut(s)	496, 520, 675, 1007, 1263, 1729, 2115
BspFNI	CGCG	2 cut(s)	462, 1755
BspHI	TCATGA	1 cut(s)	2290
BspLI	GGNNCC	2 cut(s)	1656, 1670
BspOI	GCTAGC	1 cut(s)	1883
BspPI	GGATC	1 cut(s)	93
BsrDI	GCAATG	3 cut(s)	1152, 1806, 1881
BsrGI	TGTACA	3 cut(s)	849, 1200, 1602
BsrI	ACTGG	5 cut(s)	74, 1147, 1198, 1705, 1796
BssECI	CCNNGG	2 cut(s)	492, 1486
BssHII	GCGCGC	1 cut(s)	460
BssMI	GATC	6 cut(s)	85, 733, 825, 1389, 1756, 2064
BssT1I	CCWWGG	1 cut(s)	492
Bst2UI	CCWGG	1 cut(s)	1847
Bst4CI	ACNGT	6 cut(s)	1292, 1334, 1411, 1966, 2125, 2275
Bst6I	CTCTTC	2 cut(s)	167, 2194
BstAPI	GCANNNNNTGC	1 cut(s)	1163
BstAUI	TGTACA	3 cut(s)	849, 1200, 1602
BstC8I	GCNNGC	7 cut(s)	240, 253, 328, 462, 897, 1881, 2109
BstF5I	GGATG	2 cut(s)	1931, 2305
BstFNI	CGCG	2 cut(s)	462, 1755
BstH2I	RGCGCY	1 cut(s)	693
BstHHI	GCGC	3 cut(s)	462, 464, 692
BstKTI	GATC	6 cut(s)	88, 736, 828, 1392, 1759, 2067
BstMAI	GTCTC	1 cut(s)	255
BstMBI	GATC	6 cut(s)	85, 733, 825, 1389, 1756, 2064
BstMWI	GCNNNNNNNGC	5 cut(s)	248, 696, 1163, 1260, 1880
BstNI	CCWGG	1 cut(s)	1847
BstNSI	RCATGY	7 cut(s)	227, 268, 330, 895, 1258, 1689, 2150
BstSCI	CCNGG	2 cut(s)	1486, 1845
BstSFI	CTRYAG	2 cut(s)	877, 2155
BstSLI	GKGCMC	1 cut(s)	1529
BstUI	CGCG	2 cut(s)	462, 1755
BstV1I	GCAGC	4 cut(s)	295, 771, 1895, 2192
BstV2I	GAAGAC	3 cut(s)	1065, 1484, 1556
BstX2I	RGATCY	2 cut(s)	85, 733
BstYI	RGATCY	2 cut(s)	85, 733
BsuRI	GGCC	3 cut(s)	195, 1073, 1742
BtgZI	GCGATG	1 cut(s)	1082
BtsCI	GGATG	2 cut(s)	1931, 2305
BtsI	GCAGTG	1 cut(s)	1811
BtsIMutI	CAGTG	3 cut(s)	1140, 1811, 1971
Cac8I	GCNNGC	7 cut(s)	240, 253, 328, 462, 897, 1881, 2109
CciI	TCATGA	1 cut(s)	2290
CfoI	GCGC	3 cut(s)	462, 464, 692
Cfr13I	GGNCC	2 cut(s)	334, 1740
CsiI	ACCWGGT	1 cut(s)	1845
Csp6I	GTAC	9 cut(s)	268, 762, 850, 1201, 1372, 1395, 1603, 1969, 2276
CviQI	GTAC	9 cut(s)	268, 762, 850, 1201, 1372, 1395, 1603, 1969, 2276
DpnI	GATC	6 cut(s)	87, 735, 827, 1391, 1758, 2066
DpnII	GATC	6 cut(s)	85, 733, 825, 1389, 1756, 2064
DraI	TTTAAA	1 cut(s)	915
DraIII	CACNNNGTG	1 cut(s)	1146
EaeI	YGGCCR	1 cut(s)	193
Eam1104I	CTCTTC	2 cut(s)	167, 2194
EarI	CTCTTC	2 cut(s)	167, 2194
Ecl136II	GAGCTC	1 cut(s)	436
Eco130I	CCWWGG	1 cut(s)	492
Eco24I	GRGCYC	1 cut(s)	438
Eco32I	GATATC	1 cut(s)	866
Eco47I	GGWCC	1 cut(s)	334
Eco53kI	GAGCTC	1 cut(s)	436
Eco57I	CTGAAG	3 cut(s)	750, 1074, 1388
Eco88I	CYCGRG	1 cut(s)	1673
EcoICRI	GAGCTC	1 cut(s)	436
EcoRI	GAATTC	1 cut(s)	2017
EcoRII	CCWGG	1 cut(s)	1845
EcoRV	GATATC	1 cut(s)	866
EcoT14I	CCWWGG	1 cut(s)	492
EcoT22I	ATGCAT	1 cut(s)	58
EcoT38I	GRGCYC	1 cut(s)	438
ErhI	CCWWGG	1 cut(s)	492
FalI	AAGNNNNNCTT	2 cut(s)	688, 720
FaqI	GGGAC	2 cut(s)	605, 1997
FbaI	TGATCA	1 cut(s)	825
Fnu4HI	GCNGC	5 cut(s)	309, 569, 785, 1884, 2181
FokI	GGATG	1 cut(s)	1938
FriOI	GRGCYC	1 cut(s)	438
Fsp4HI	GCNGC	5 cut(s)	309, 569, 785, 1884, 2181
FspBI	CTAG	6 cut(s)	35, 737, 1013, 1619, 1812, 1880
GlaI	GCGC	3 cut(s)	461, 463, 691
GluI	GCNGC	5 cut(s)	309, 569, 785, 1884, 2181
GsaI	CCCAGC	1 cut(s)	2253
GsuI	CTGGAG	1 cut(s)	1813
HaeII	RGCGCY	1 cut(s)	693
HaeIII	GGCC	3 cut(s)	195, 1073, 1742
HapII	CCGG	1 cut(s)	1488
HhaI	GCGC	3 cut(s)	462, 464, 692
Hin6I	GCGC	3 cut(s)	460, 462, 690
HinP1I	GCGC	3 cut(s)	460, 462, 690
HincII	GTYRAC	1 cut(s)	1953
HindII	GTYRAC	1 cut(s)	1953
HindIII	AAGCTT	1 cut(s)	236
HinfI	GANTC	7 cut(s)	355, 488, 536, 1009, 1106, 1318, 2026
HpaII	CCGG	1 cut(s)	1488
HphI	GGTGA	4 cut(s)	16, 364, 652, 1587
Hpy166II	GTNNAC	5 cut(s)	229, 1038, 1953, 1969, 2152
Hpy188I	TCNGA	5 cut(s)	529, 769, 830, 997, 1659
Hpy188III	TCNNGA	6 cut(s)	41, 79, 485, 1387, 1718, 2291
Hpy8I	GTNNAC	5 cut(s)	229, 1038, 1953, 1969, 2152
HpyAV	CCTTC	9 cut(s)	76, 347, 529, 538, 764, 1200, 1540, 1786, 1903
HpyCH4III	ACNGT	6 cut(s)	1292, 1334, 1411, 1966, 2125, 2275
HpyCH4IV	ACGT	1 cut(s)	1121
HpyF10VI	GCNNNNNNNGC	5 cut(s)	248, 696, 1163, 1260, 1880
HpySE526I	ACGT	1 cut(s)	1121
HspAI	GCGC	3 cut(s)	460, 462, 690
Ksp22I	TGATCA	1 cut(s)	825
Kzo9I	GATC	6 cut(s)	85, 733, 825, 1389, 1756, 2064
LmnI	GCTCC	5 cut(s)	473, 687, 833, 1030, 1363
Lsp1109I	GCAGC	4 cut(s)	295, 771, 1895, 2192
LweI	GCATC	6 cut(s)	43, 295, 485, 817, 1650, 2245
MabI	ACCWGGT	1 cut(s)	1845
MaeI	CTAG	6 cut(s)	35, 737, 1013, 1619, 1812, 1880
MaeII	ACGT	1 cut(s)	1121
MaeIII	GTNAC	5 cut(s)	1117, 1295, 1593, 1688, 2161
MalI	GATC	6 cut(s)	87, 735, 827, 1391, 1758, 2066
MboI	GATC	6 cut(s)	85, 733, 825, 1389, 1756, 2064
MfeI	CAATTG	1 cut(s)	1973
MflI	RGATCY	2 cut(s)	85, 733
MhlI	GDGCHC	2 cut(s)	438, 1529
MlsI	TGGCCA	1 cut(s)	195
MluCI	AATT	8 cut(s)	20, 278, 635, 1216, 1327, 1973, 2017, 2045
MluNI	TGGCCA	1 cut(s)	195
MlyI	GAGTC	3 cut(s)	482, 530, 1312
MmeI	TCCRAC	3 cut(s)	567, 1903, 2205
Mox20I	TGGCCA	1 cut(s)	195
Mph1103I	ATGCAT	1 cut(s)	58
MroXI	GAANNNNTTC	2 cut(s)	359, 383
MscI	TGGCCA	1 cut(s)	195
MseI	TTAA	8 cut(s)	108, 114, 741, 914, 1086, 2048, 2090, 2268
Msp20I	TGGCCA	1 cut(s)	195
MspI	CCGG	1 cut(s)	1488
MspR9I	CCNGG	2 cut(s)	1488, 1847
MunI	CAATTG	1 cut(s)	1973
Mva1269I	GAATGC	1 cut(s)	56
MvaI	CCWGG	1 cut(s)	1847
MvnI	CGCG	2 cut(s)	462, 1755
MwoI	GCNNNNNNNGC	5 cut(s)	248, 696, 1163, 1260, 1880
NciI	CCSGG	1 cut(s)	1488
NdeII	GATC	6 cut(s)	85, 733, 825, 1389, 1756, 2064
NheI	GCTAGC	1 cut(s)	1879
NlaIV	GGNNCC	2 cut(s)	1656, 1670
NmeAIII	GCCGAG	1 cut(s)	1836
NmuCI	GTSAC	1 cut(s)	1593
NsiI	ATGCAT	1 cut(s)	58
NspI	RCATGY	7 cut(s)	227, 268, 330, 895, 1258, 1689, 2150
PaeI	GCATGC	1 cut(s)	330
PaeR7I	CTCGAG	1 cut(s)	1673
PagI	TCATGA	1 cut(s)	2290
PauI	GCGCGC	1 cut(s)	460
PciI	ACATGT	3 cut(s)	223, 264, 2146
PcsI	WCGNNNNNNNCGW	1 cut(s)	1567
PctI	GAATGC	1 cut(s)	56
PdmI	GAANNNNTTC	2 cut(s)	359, 383
PfeI	GAWTC	4 cut(s)	355, 1009, 1106, 2026
PkrI	GCNGC	5 cut(s)	310, 570, 786, 1885, 2182
PleI	GAGTC	3 cut(s)	482, 530, 1312
PpsI	GAGTC	3 cut(s)	482, 530, 1312
PscI	ACATGT	3 cut(s)	223, 264, 2146
PshBI	ATTAAT	1 cut(s)	2048
PsiI	TTATAA	1 cut(s)	905
Psp124BI	GAGCTC	1 cut(s)	438
Psp1406I	AACGTT	1 cut(s)	1121
Psp6I	CCWGG	1 cut(s)	1845
PspFI	CCCAGC	1 cut(s)	2249
PspGI	CCWGG	1 cut(s)	1845
PspN4I	GGNNCC	2 cut(s)	1656, 1670
PspPI	GGNCC	2 cut(s)	334, 1740
PspXI	VCTCGAGB	1 cut(s)	1673
PsuI	RGATCY	2 cut(s)	85, 733
PteI	GCGCGC	1 cut(s)	460
RsaI	GTAC	9 cut(s)	269, 763, 851, 1202, 1373, 1396, 1604, 1970, 2277
RsaNI	GTAC	9 cut(s)	268, 762, 850, 1201, 1372, 1395, 1603, 1969, 2276
SacI	GAGCTC	1 cut(s)	438
SaqAI	TTAA	8 cut(s)	108, 114, 741, 914, 1086, 2048, 2090, 2268
SatI	GCNGC	5 cut(s)	309, 569, 785, 1884, 2181
Sau3AI	GATC	6 cut(s)	85, 733, 825, 1389, 1756, 2064
Sau96I	GGNCC	2 cut(s)	334, 1740
SchI	GAGTC	3 cut(s)	482, 530, 1312
ScrFI	CCNGG	2 cut(s)	1488, 1847
SduI	GDGCHC	2 cut(s)	438, 1529
SexAI	ACCWGGT	1 cut(s)	1845
SfaNI	GCATC	6 cut(s)	43, 295, 485, 817, 1650, 2245
SfcI	CTRYAG	2 cut(s)	877, 2155
Sfr274I	CTCGAG	1 cut(s)	1673
SinI	GGWCC	1 cut(s)	334
SlaI	CTCGAG	1 cut(s)	1673
SmlI	CTYRAG	4 cut(s)	77, 406, 694, 1673
SmoI	CTYRAG	4 cut(s)	77, 406, 694, 1673
SpeI	ACTAGT	1 cut(s)	34
SphI	GCATGC	1 cut(s)	330
Sse9I	AATT	8 cut(s)	20, 278, 635, 1216, 1327, 1973, 2017, 2045
SsiI	CCGC	3 cut(s)	444, 569, 1753
SspI	AATATT	1 cut(s)	112
SspMI	CTAG	6 cut(s)	35, 737, 1013, 1619, 1812, 1880
SstI	GAGCTC	1 cut(s)	438
StyD4I	CCNGG	2 cut(s)	1486, 1845
StyI	CCWWGG	1 cut(s)	492
TaaI	ACNGT	6 cut(s)	1292, 1334, 1411, 1966, 2125, 2275
TaiI	ACGT	1 cut(s)	1124
TaqI	TCGA	4 cut(s)	24, 285, 1477, 1674
TaqII	GACCGA	1 cut(s)	1077
TasI	AATT	8 cut(s)	20, 278, 635, 1216, 1327, 1973, 2017, 2045
TatI	WGTACW	6 cut(s)	761, 849, 1200, 1371, 1394, 1602
TauI	GCSGC	1 cut(s)	571
TfiI	GAWTC	4 cut(s)	355, 1009, 1106, 2026
Tru1I	TTAA	8 cut(s)	108, 114, 741, 914, 1086, 2048, 2090, 2268
Tru9I	TTAA	8 cut(s)	108, 114, 741, 914, 1086, 2048, 2090, 2268
TscAI	CASTG	3 cut(s)	1147, 1811, 1971
TseFI	GTSAC	1 cut(s)	1593
TseI	GCWGC	4 cut(s)	308, 784, 1883, 2180
Tsp45I	GTSAC	1 cut(s)	1593
TspGWI	ACGGA	1 cut(s)	569
TspRI	CASTG	3 cut(s)	1147, 1811, 1971
VpaK11BI	GGWCC	1 cut(s)	334
VspI	ATTAAT	1 cut(s)	2048
XapI	RAATTY	2 cut(s)	1216, 2017
XceI	RCATGY	7 cut(s)	227, 268, 330, 895, 1258, 1689, 2150
XhoI	CTCGAG	1 cut(s)	1673
XmnI	GAANNNNTTC	2 cut(s)	359, 383
XspI	CTAG	6 cut(s)	35, 737, 1013, 1619, 1812, 1880
Zsp2I	ATGCAT	1 cut(s)	58

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.