Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0011751

Physical Location & Seq

Genomic Coordinates Forward (+)

57182650 .. 57188464

Gene Structure 5815 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG350000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGTTGTCGAGGGCTTCCATGGAACACTCACAAGTGATAGAAGAACAACCTCTTCCTTCTTTTCTATCGGCTCATCAACTTAAGAAGCAAAGAGAGAAGATGGTGAAGTTCTCTAAGCAATTTGAGGCACAACTAGTTCCCGAATGGAAAGATGCATTCGTAGATTACTGGCAACTCAAGAAGGATCTCAAAAAAATCCATCTCCTTAATATTAACAACAACAACAACACACCTACTCATAATAGCTCTTTATCTAACACTCTCTTCACATCTATAAAGAAGTTCTCTTTATTTGGCCATCAACACAGAGAACATGAACTCATACATGTTCACAAGAAGCTTGCCTCATCAGCAAGCAAGGGAGACATGTACGAAACTGAATTGTTCGAGCAACTTGCTGATACTGATGCTGCGAAAGAGTTTTTTGCATGCTTGGACCTTCAACTCAACAAGGTGAATCAGTTCTACCAGAAAAAGGAGAAAGAGTTCATGGAGAGAGGGCAGTCCTTGAGGAAGCAGATGGATATACTCATTGAGCTCAAAACCGCTTTCAAGAAACAGCGCGCCAAAGGTGGAGCATCTGCTCAGGACTCCAAGGAGGAAGCCTCTATCTCATGCACCTTCTCATCTGAGGAGGACTCTGTGAAGGACAAAACGGAACTTGAACAGCCGCAAGAAACTGATGAGTTGGAGAAAAATGATGAAGTAGCCTACACTGAAGTCCCAATATCAGGCGAATTGGTGAAACCAATAAGAATGAAAAGTGAGGATATTGGGAAACAACTGAGGAGCGCCTCAAGCCGTTCTTTCAGTTGCCAAGGGAAGAACTTAAAGATAAACATTCCTCTGACTACACCGTCACGCACCTTCTCAGCAATCAGTTATTTAGTTTGGGAAGATCTAGTTAATCAGTCCTCAAAGAAATGTACTTCAGAAGGCATGAGTAAGCTGCACATCAACAAAACCAAGTTGCATCATGCAGATAAGATGATCAGAGGAGCTTTTGTTGAGCTGTACAAAGGCTTGGGATATCTCAAAACCTACAGGAACTTGAACATGCTTGCTTTTATAAAGATTTTAAAGAAGTTTGACAAGGCGACTGAAAAACAAGTGCTTCCAATCTATCTAAAAGTTGTTGAGAGTTCCTATTTCAACAGCTCAGATAAGGTTATGAATCTAGCAGATGAAGTTGAGGAGCTGTTTACCAAACACTTCGCTGAAGAAGACCGAAGAAAGGCCATGAAATACCTTAAACCACATCATCGCAAAGAATCACACTCTGTGACGTTCTTCATTGGTCTATTCACTGGGTGTTTCATTGCACTCTTTGCTGGATATGTCATTATGGCTCATATTACTGGGTTGTACAGAAGGCAACCAAATTCTATATACATGGAAACTGCCTACCCTATACTCAGCATGTTCAGCCTATTGTTTCTACACTTCTTCCTATACGGTTGTAACATTTTCGCGTGGAGAAAGACTCGTATAAATTACAGTTTCATCTTTGAACTATCCCCAACAAAGGAGCTGAAGTACAGAGATGTGTTCTTGATCTGTACTACATCAATGACTGTCGTGGTTGGGGTCATGTTTCTTCATTTGTTCTTGCTAACAAAAGGATATTCATACACCCAAGTTCGAGCAATCCCCGGTCTTCTACTGCTGATGTTTCTACTAATACTTGTGTGCCCCTTCAACATCATCTACAAATCAAGCCGTTGTCGTCTTCTTCGTGTGATAAGAAATATCATTTTGTCACCTCTGTACAAGGTTGTCATGCTAGACTTCTTCATGGCAGACCAACTTTGTAGTCAGGTTCCGATGCTTAGGAACCTCGAGTATGTGGCATGTTACTACATAACTGGAAGCTACAAAACTCAGGACTATGGCTATTGCATGAGGGCCACGAATTACCGCGATCTTGCTTATGCCGTGTCCTTCCTGCCCTATTACTGGAGGGCAATGCAGGTAACGCTACTAGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0006950 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0012505 GO:0015698 GO:0016020 GO:0016036 GO:0031667 GO:0031668 GO:0031669 GO:0031984 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0071496 GO:0071944 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

662

Amino Acids

76.96

Weight (kDa)

9.2

Isoelectric Point (pI)

43.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	35 - 379	4e-65	SPX domain
EXS	PF03124	469 - 658	1.6e-42	EXS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011751)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68740 AT1G68740
fragaria_vesca	FvH4_4g28410
malus_domestica	MD13G1049800.v1.1 MD16G1050800.v1.1
prunus_persica	Prupe.1G301900_v2.0.a1
pyrus_communis	pycom13g04410 pycom13g04420 pycom16g04450
rosa_chinensis	RchiOBHm_Chr4g0436361
rosa_laevigata	RLG00000006525
rosa_multiflora	Rmu_sc0006449.1_g000007
rosa_roxburghii	Rroxscaffold_5G00377530
rosa_rugosa	Rorug04G0293300
rosa_samantha	Rh4AG347500 Rh4BG356300 Rh4CG370900 Rh4DG350000
rosa_wichuraiana	Rw4G030380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1070
AasI	GACNNNNNNGTC	1 cut(s)	856
Acc36I	ACCTGC	1 cut(s)	1960
AccII	CGCG	3 cut(s)	564, 1472, 1920
AciI	CCGC	3 cut(s)	546, 671, 1918
AclWI	GGATC	1 cut(s)	192
AcoI	YGGCCR	1 cut(s)	295
AcsI	RAATTY	1 cut(s)	1381
AcuI	CTGAAG	4 cut(s)	738, 915, 1239, 1553
AdeI	CACNNNGTG	2 cut(s)	1282, 1311
AfaI	GTAC	7 cut(s)	371, 928, 1016, 1367, 1538, 1561, 1769
AfiI	CCNNNNNNNGG	5 cut(s)	475, 731, 1234, 1525, 1956
AflII	CTTAAG	1 cut(s)	80
AflIII	ACRYGT	2 cut(s)	325, 366
AgsI	TTSAA	7 cut(s)	443, 553, 665, 1054, 1153, 1511, 1699
AhlI	ACTAGT	1 cut(s)	133
AloI	GAACNNNNNNTCC	2 cut(s)	470, 502
Alw21I	GWGCWC	1 cut(s)	540
Alw26I	GTCTC	1 cut(s)	357
AlwI	GGATC	1 cut(s)	192
Ama87I	CYCGRG	1 cut(s)	1838
AoxI	GGCC	3 cut(s)	295, 1236, 1905
ApeKI	GCWGC	2 cut(s)	410, 949
ApoI	RAATTY	1 cut(s)	1381
Asp700I	GAANNNNTTC	2 cut(s)	461, 485
AspLEI	GCGC	3 cut(s)	564, 566, 794
AspS9I	GGNCC	2 cut(s)	436, 1905
AsuC2I	CCSGG	1 cut(s)	1653
AsuHPI	GGTGA	4 cut(s)	115, 466, 754, 1752
AvaI	CYCGRG	1 cut(s)	1838
AvaII	GGWCC	1 cut(s)	436
BaeGI	GKGCMC	1 cut(s)	1694
BalI	TGGCCA	1 cut(s)	297
BanII	GRGCYC	1 cut(s)	540
BbsI	GAAGAC	3 cut(s)	1230, 1649, 1721
Bbv12I	GWGCWC	1 cut(s)	540
BbvI	GCAGC	2 cut(s)	397, 936
BccI	CCATC	4 cut(s)	94, 207, 306, 514
BceAI	ACGGC	3 cut(s)	786, 1704, 1919
BcgI	CGANNNNNNTGC	2 cut(s)	377, 411
BclI	TGATCA	1 cut(s)	990
BcnI	CCSGG	1 cut(s)	1653
BcoDI	GTCTC	1 cut(s)	357
BcuI	ACTAGT	1 cut(s)	133
BfaI	CTAG	5 cut(s)	134, 902, 1178, 1784, 1982
BfmI	CTRYAG	1 cut(s)	1042
BfoI	RGCGCY	1 cut(s)	795
BfrI	CTTAAG	1 cut(s)	80
BfuAI	ACCTGC	1 cut(s)	1960
BglII	AGATCT	1 cut(s)	898
BisI	GCNGC	3 cut(s)	411, 671, 950
BlsI	GCNGC	3 cut(s)	412, 672, 951
Bme1390I	CCNGG	1 cut(s)	1653
Bme18I	GGWCC	1 cut(s)	436
BmeT110I	CYCGRG	1 cut(s)	1838
BmgT120I	GGNCC	2 cut(s)	436, 1905
BmiI	GGNNCC	2 cut(s)	1821, 1835
BmrFI	CCNGG	1 cut(s)	1653
BmrI	ACTGGG	2 cut(s)	1317, 1368
BmsI	GCATC	5 cut(s)	142, 397, 587, 982, 1815
BmuI	ACTGGG	2 cut(s)	1317, 1368
BpiI	GAAGAC	3 cut(s)	1230, 1649, 1721
BplI	GAGNNNNNCTC	6 cut(s)	590, 622, 623, 655, 1468, 1500
BpmI	CTGGAG	1 cut(s)	1978
Bpu10I	CCTNAGC	2 cut(s)	585, 1829
BpuEI	CTTGAG	3 cut(s)	161, 529, 781
BpuMI	CCSGG	1 cut(s)	1653
BsaJI	CCNNGG	4 cut(s)	18, 594, 817, 1651
BsaXI	ACNNNNNCTCC	6 cut(s)	470, 500, 990, 1020, 1520, 1550
Bsc4I	CCNNNNNNNGG	5 cut(s)	475, 731, 1234, 1525, 1956
Bse1I	ACTGG	5 cut(s)	173, 1312, 1363, 1870, 1961
Bse3DI	GCAATG	2 cut(s)	1317, 1971
BseDI	CCNNGG	4 cut(s)	18, 594, 817, 1651
BseLI	CCNNNNNNNGG	5 cut(s)	475, 731, 1234, 1525, 1956
BseMI	GCAATG	2 cut(s)	1317, 1971
BseMII	CTCAG	7 cut(s)	599, 621, 776, 885, 1173, 1429, 1895
BseNI	ACTGG	5 cut(s)	173, 1312, 1363, 1870, 1961
BsePI	GCGCGC	1 cut(s)	562
BseRI	GAGGAG	4 cut(s)	647, 802, 1011, 1208
BseSI	GKGCMC	1 cut(s)	1694
BseXI	GCAGC	2 cut(s)	397, 936
BsgI	GTGCAG	1 cut(s)	935
Bsh1236I	CGCG	3 cut(s)	564, 1472, 1920
BshFI	GGCC	3 cut(s)	297, 1238, 1907
BsiHKAI	GWGCWC	1 cut(s)	540
BsiHKCI	CYCGRG	1 cut(s)	1838
BsiSI	CCGG	1 cut(s)	1653
BslFI	GGGAC	1 cut(s)	707
BslI	CCNNNNNNNGG	5 cut(s)	475, 731, 1234, 1525, 1956
BsmAI	GTCTC	1 cut(s)	357
BsmFI	GGGAC	1 cut(s)	707
BsmI	GAATGC	1 cut(s)	155
BsnI	GGCC	3 cut(s)	297, 1238, 1907
BsoBI	CYCGRG	1 cut(s)	1838
Bsp1286I	GDGCHC	2 cut(s)	540, 1694
Bsp1407I	TGTACA	3 cut(s)	1014, 1365, 1767
Bsp143I	GATC	5 cut(s)	184, 898, 990, 1554, 1921
Bsp19I	CCATGG	1 cut(s)	18
BspACI	CCGC	3 cut(s)	546, 671, 1918
BspANI	GGCC	3 cut(s)	297, 1238, 1907
BspCNI	CTCAG	7 cut(s)	598, 622, 777, 884, 1172, 1428, 1894
BspFNI	CGCG	3 cut(s)	564, 1472, 1920
BspLI	GGNNCC	2 cut(s)	1821, 1835
BspMI	ACCTGC	1 cut(s)	1960
BspPI	GGATC	1 cut(s)	192
BspTI	CTTAAG	1 cut(s)	80
BsrDI	GCAATG	2 cut(s)	1317, 1971
BsrGI	TGTACA	3 cut(s)	1014, 1365, 1767
BsrI	ACTGG	5 cut(s)	173, 1312, 1363, 1870, 1961
BssECI	CCNNGG	4 cut(s)	18, 594, 817, 1651
BssHII	GCGCGC	1 cut(s)	562
BssMI	GATC	5 cut(s)	184, 898, 990, 1554, 1921
BssT1I	CCWWGG	3 cut(s)	18, 594, 817
Bst4CI	ACNGT	4 cut(s)	858, 1457, 1499, 1576
Bst6I	CTCTTC	2 cut(s)	57, 269
BstAFI	CTTAAG	1 cut(s)	80
BstAPI	GCANNNNNTGC	1 cut(s)	1328
BstAUI	TGTACA	3 cut(s)	1014, 1365, 1767
BstC8I	GCNNGC	5 cut(s)	342, 355, 430, 564, 1062
BstDEI	CTNAG	9 cut(s)	114, 585, 630, 785, 871, 1159, 1415, 1829, 1881
BstDSI	CCRYGG	1 cut(s)	18
BstFNI	CGCG	3 cut(s)	564, 1472, 1920
BstH2I	RGCGCY	1 cut(s)	795
BstHHI	GCGC	3 cut(s)	564, 566, 794
BstKTI	GATC	5 cut(s)	187, 901, 993, 1557, 1924
BstMAI	GTCTC	1 cut(s)	357
BstMBI	GATC	5 cut(s)	184, 898, 990, 1554, 1921
BstMWI	GCNNNNNNNGC	5 cut(s)	350, 798, 1328, 1425, 1975
BstNSI	RCATGY	6 cut(s)	329, 370, 432, 1060, 1423, 1854
BstSCI	CCNGG	1 cut(s)	1651
BstSFI	CTRYAG	1 cut(s)	1042
BstSLI	GKGCMC	1 cut(s)	1694
BstUI	CGCG	3 cut(s)	564, 1472, 1920
BstV1I	GCAGC	2 cut(s)	397, 936
BstV2I	GAAGAC	3 cut(s)	1230, 1649, 1721
BstX2I	RGATCY	2 cut(s)	184, 898
BstYI	RGATCY	2 cut(s)	184, 898
BsuRI	GGCC	3 cut(s)	297, 1238, 1907
BtgI	CCRYGG	1 cut(s)	18
BtgZI	GCGATG	1 cut(s)	1247
BtsIMutI	CAGTG	2 cut(s)	714, 1305
BveI	ACCTGC	1 cut(s)	1960
Cac8I	GCNNGC	5 cut(s)	342, 355, 430, 564, 1062
CfoI	GCGC	3 cut(s)	564, 566, 794
Cfr13I	GGNCC	2 cut(s)	436, 1905
Csp6I	GTAC	7 cut(s)	370, 927, 1015, 1366, 1537, 1560, 1768
CviQI	GTAC	7 cut(s)	370, 927, 1015, 1366, 1537, 1560, 1768
DdeI	CTNAG	9 cut(s)	114, 585, 630, 785, 871, 1159, 1415, 1829, 1881
DpnI	GATC	5 cut(s)	186, 900, 992, 1556, 1923
DpnII	GATC	5 cut(s)	184, 898, 990, 1554, 1921
DraI	TTTAAA	1 cut(s)	1080
DraIII	CACNNNGTG	2 cut(s)	1282, 1311
DrdI	GACNNNNNNGTC	1 cut(s)	856
DseDI	GACNNNNNNGTC	1 cut(s)	856
EaeI	YGGCCR	1 cut(s)	295
Eam1104I	CTCTTC	2 cut(s)	57, 269
EarI	CTCTTC	2 cut(s)	57, 269
Ecl136II	GAGCTC	1 cut(s)	538
Eco130I	CCWWGG	3 cut(s)	18, 594, 817
Eco24I	GRGCYC	1 cut(s)	540
Eco32I	GATATC	1 cut(s)	1031
Eco47I	GGWCC	1 cut(s)	436
Eco53kI	GAGCTC	1 cut(s)	538
Eco57I	CTGAAG	4 cut(s)	738, 915, 1239, 1553
Eco88I	CYCGRG	1 cut(s)	1838
EcoICRI	GAGCTC	1 cut(s)	538
EcoRV	GATATC	1 cut(s)	1031
EcoT14I	CCWWGG	3 cut(s)	18, 594, 817
EcoT22I	ATGCAT	1 cut(s)	157
EcoT38I	GRGCYC	1 cut(s)	540
ErhI	CCWWGG	3 cut(s)	18, 594, 817
FalI	AAGNNNNNCTT	2 cut(s)	790, 822
FaqI	GGGAC	1 cut(s)	707
FbaI	TGATCA	1 cut(s)	990
Fnu4HI	GCNGC	3 cut(s)	411, 671, 950
FriOI	GRGCYC	1 cut(s)	540
Fsp4HI	GCNGC	3 cut(s)	411, 671, 950
FspBI	CTAG	5 cut(s)	134, 902, 1178, 1784, 1982
GlaI	GCGC	3 cut(s)	563, 565, 793
GluI	GCNGC	3 cut(s)	411, 671, 950
GsuI	CTGGAG	1 cut(s)	1978
HaeII	RGCGCY	1 cut(s)	795
HaeIII	GGCC	3 cut(s)	297, 1238, 1907
HapII	CCGG	1 cut(s)	1653
HhaI	GCGC	3 cut(s)	564, 566, 794
Hin6I	GCGC	3 cut(s)	562, 564, 792
HinP1I	GCGC	3 cut(s)	562, 564, 792
HindIII	AAGCTT	1 cut(s)	338
HinfI	GANTC	6 cut(s)	457, 590, 638, 1174, 1271, 1483
HpaII	CCGG	1 cut(s)	1653
HphI	GGTGA	4 cut(s)	115, 466, 754, 1752
Hpy166II	GTNNAC	2 cut(s)	331, 1203
Hpy188I	TCNGA	6 cut(s)	631, 849, 934, 995, 1162, 1824
Hpy188III	TCNNGA	6 cut(s)	140, 178, 553, 587, 1552, 1883
Hpy8I	GTNNAC	2 cut(s)	331, 1203
HpyCH4III	ACNGT	4 cut(s)	858, 1457, 1499, 1576
HpyCH4IV	ACGT	1 cut(s)	1286
HpyCH4V	TGCA	9 cut(s)	155, 428, 618, 952, 973, 980, 1322, 1899, 1969
HpyF10VI	GCNNNNNNNGC	5 cut(s)	350, 798, 1328, 1425, 1975
HpyF3I	CTNAG	9 cut(s)	114, 585, 630, 785, 871, 1159, 1415, 1829, 1881
HpySE526I	ACGT	1 cut(s)	1286
HspAI	GCGC	3 cut(s)	562, 564, 792
Ksp22I	TGATCA	1 cut(s)	990
Kzo9I	GATC	5 cut(s)	184, 898, 990, 1554, 1921
LmnI	GCTCC	5 cut(s)	575, 789, 998, 1195, 1528
Lsp1109I	GCAGC	2 cut(s)	397, 936
LweI	GCATC	5 cut(s)	142, 397, 587, 982, 1815
MaeI	CTAG	5 cut(s)	134, 902, 1178, 1784, 1982
MaeII	ACGT	1 cut(s)	1286
MaeIII	GTNAC	6 cut(s)	858, 1282, 1460, 1758, 1853, 1972
MalI	GATC	5 cut(s)	186, 900, 992, 1556, 1923
MboI	GATC	5 cut(s)	184, 898, 990, 1554, 1921
MflI	RGATCY	2 cut(s)	184, 898
MhlI	GDGCHC	2 cut(s)	540, 1694
MlsI	TGGCCA	1 cut(s)	297
MluCI	AATT	6 cut(s)	119, 380, 737, 1381, 1492, 1912
MluNI	TGGCCA	1 cut(s)	297
MlyI	GAGTC	3 cut(s)	584, 632, 1477
MmeI	TCCRAC	1 cut(s)	669
Mox20I	TGGCCA	1 cut(s)	297
Mph1103I	ATGCAT	1 cut(s)	157
MroXI	GAANNNNTTC	2 cut(s)	461, 485
MscI	TGGCCA	1 cut(s)	297
MseI	TTAA	7 cut(s)	81, 207, 213, 830, 906, 1079, 1251
Msp20I	TGGCCA	1 cut(s)	297
MspCI	CTTAAG	1 cut(s)	80
MspI	CCGG	1 cut(s)	1653
MspR9I	CCNGG	1 cut(s)	1653
Mva1269I	GAATGC	1 cut(s)	155
MvnI	CGCG	3 cut(s)	564, 1472, 1920
MwoI	GCNNNNNNNGC	5 cut(s)	350, 798, 1328, 1425, 1975
NciI	CCSGG	1 cut(s)	1653
NcoI	CCATGG	1 cut(s)	18
NdeII	GATC	5 cut(s)	184, 898, 990, 1554, 1921
NlaIV	GGNNCC	2 cut(s)	1821, 1835
NmuCI	GTSAC	3 cut(s)	858, 1282, 1758
NsiI	ATGCAT	1 cut(s)	157
NspI	RCATGY	6 cut(s)	329, 370, 432, 1060, 1423, 1854
PaeI	GCATGC	1 cut(s)	432
PaeR7I	CTCGAG	1 cut(s)	1838
PauI	GCGCGC	1 cut(s)	562
PciI	ACATGT	2 cut(s)	325, 366
PcsI	WCGNNNNNNNCGW	1 cut(s)	1732
PctI	GAATGC	1 cut(s)	155
PdmI	GAANNNNTTC	2 cut(s)	461, 485
PfeI	GAWTC	3 cut(s)	457, 1174, 1271
PkrI	GCNGC	3 cut(s)	412, 672, 951
PleI	GAGTC	3 cut(s)	584, 632, 1477
PpsI	GAGTC	3 cut(s)	584, 632, 1477
PscI	ACATGT	2 cut(s)	325, 366
PsiI	TTATAA	1 cut(s)	1070
Psp124BI	GAGCTC	1 cut(s)	540
PspN4I	GGNNCC	2 cut(s)	1821, 1835
PspPI	GGNCC	2 cut(s)	436, 1905
PspXI	VCTCGAGB	1 cut(s)	1838
PsuI	RGATCY	2 cut(s)	184, 898
PteI	GCGCGC	1 cut(s)	562
RsaI	GTAC	7 cut(s)	371, 928, 1016, 1367, 1538, 1561, 1769
RsaNI	GTAC	7 cut(s)	370, 927, 1015, 1366, 1537, 1560, 1768
SacI	GAGCTC	1 cut(s)	540
SaqAI	TTAA	7 cut(s)	81, 207, 213, 830, 906, 1079, 1251
SatI	GCNGC	3 cut(s)	411, 671, 950
Sau3AI	GATC	5 cut(s)	184, 898, 990, 1554, 1921
Sau96I	GGNCC	2 cut(s)	436, 1905
SchI	GAGTC	3 cut(s)	584, 632, 1477
ScrFI	CCNGG	1 cut(s)	1653
SduI	GDGCHC	2 cut(s)	540, 1694
SfaNI	GCATC	5 cut(s)	142, 397, 587, 982, 1815
SfcI	CTRYAG	1 cut(s)	1042
Sfr274I	CTCGAG	1 cut(s)	1838
SinI	GGWCC	1 cut(s)	436
SlaI	CTCGAG	1 cut(s)	1838
SmlI	CTYRAG	5 cut(s)	80, 176, 508, 796, 1838
SmoI	CTYRAG	5 cut(s)	80, 176, 508, 796, 1838
SpeI	ACTAGT	1 cut(s)	133
SphI	GCATGC	1 cut(s)	432
Sse9I	AATT	6 cut(s)	119, 380, 737, 1381, 1492, 1912
SsiI	CCGC	3 cut(s)	546, 671, 1918
SspI	AATATT	1 cut(s)	211
SspMI	CTAG	5 cut(s)	134, 902, 1178, 1784, 1982
SstI	GAGCTC	1 cut(s)	540
StyD4I	CCNGG	1 cut(s)	1651
StyI	CCWWGG	3 cut(s)	18, 594, 817
TaaI	ACNGT	4 cut(s)	858, 1457, 1499, 1576
TaiI	ACGT	1 cut(s)	1289
TaqI	TCGA	4 cut(s)	8, 387, 1642, 1839
TaqII	GACCGA	1 cut(s)	1242
TasI	AATT	6 cut(s)	119, 380, 737, 1381, 1492, 1912
TatI	WGTACW	6 cut(s)	926, 1014, 1365, 1536, 1559, 1767
TauI	GCSGC	1 cut(s)	673
TfiI	GAWTC	3 cut(s)	457, 1174, 1271
Tru1I	TTAA	7 cut(s)	81, 207, 213, 830, 906, 1079, 1251
Tru9I	TTAA	7 cut(s)	81, 207, 213, 830, 906, 1079, 1251
TscAI	CASTG	2 cut(s)	721, 1312
TseFI	GTSAC	3 cut(s)	858, 1282, 1758
TseI	GCWGC	2 cut(s)	410, 949
Tsp45I	GTSAC	3 cut(s)	858, 1282, 1758
TspGWI	ACGGA	1 cut(s)	671
TspRI	CASTG	2 cut(s)	721, 1312
Vha464I	CTTAAG	1 cut(s)	80
VpaK11BI	GGWCC	1 cut(s)	436
XapI	RAATTY	1 cut(s)	1381
XceI	RCATGY	6 cut(s)	329, 370, 432, 1060, 1423, 1854
XhoI	CTCGAG	1 cut(s)	1838
XmnI	GAANNNNTTC	2 cut(s)	461, 485
XspI	CTAG	5 cut(s)	134, 902, 1178, 1784, 1982
Zsp2I	ATGCAT	1 cut(s)	157

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.