Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0006786

Physical Location & Seq

Genomic Coordinates Forward (+)

6563626 .. 6566762

Gene Structure 3137 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1094900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1431 bp

ATGACCATCGCTTCAGCCCAAGACCTCTGCCTGCAATTAATTTCGTCGGCATTTCAAAGATGCCGCACGTCGGAGGACCTCTGCAGACTCTCCGTCCTTCTCAAGCGCTCTCCGCCGTCTGATCCCCGCTCCGTTCAAATTTCAGTCTCGGATACCGGCGTGGGGAGCTGCGCAGAGGAGTTCGGAGGTTTGAAGCTTCGTAGGGAGGCATTTGGCGCGCAAATTTGGGATGGATTGCTTTTCGTCACAACCACCGGTATTGGTGATGATGAGATACATCATTACCAGTTGAATCTGAAAGAAAGTGCGTCGGGGAGACGGTTGACCAGGCTGCCTTCAAATCTTAAGAATGGACTCCAATTCAGTGGGACTGAAGTACGTCTGTCAATTTTCGAAAGCATTGATGTTTTGCTGCCAGCGTTTTGTTGCTTCTTTCGGAAGATCCTCATGTTGAAGATCCCGAATGTTTCAATTGAACTGGTAGTTGAACAAGGGGATGCTCCTGGATCTAGATACGTAAATGTTTTTGTAGCGAATGAGGGGAGGAACCCTTTACCTTTTGCAGCCTCAAATCTTGAACGTTTAAGGTCAGGGGTTGAAGACTACGTTTTTAAGCATGGGAATACATTAGGGAAAAAATGCGAGTCATGCTTCTCAAGTGGGGAGCATCTCAAGATTGGTAGTGGAGCAGCATGCTGCACAGAAAGCCGAAGGTATCCTGGATCAGTGATGGAAGCGGTGATTGTAATTAGTGAAATGTCGGAGGTAGCCAGTACTTGTCCGAGGACATGTAGCTCGAAAACTGAGGTCTTGTACTTCAAAGATTTCACACCGTGCCCAATCCCTCAATCCTCTCTGAAGGCGTTAGCTAGCATTGACTGGAAAAGTTACGGATTGAGCTTTGGGAGCGTTGTGGATCAGGGCGGCTTTGCATTAGTGGAATGGGACAACTTGCCCCCATCTGTTCAAATCGATATTGTCCTCCACCACTACCACGAGCAAATACCATCAGCAAGGCGAAAGACGCGACCTGATCAGAATCTCATTAAAAAAGCAATTAAGCTTGCATTGAACGATTTGAAGGACAATTACGCTGGAGTTCTTCTAAGTGCCCATGCCGTCAAGGTCCGTAGCTATGCCCCCGATCTCGCGAAAACAATTTCTAGCCTAATCTTGTCTTCCAATGACGCGGACTTCCGAGAAGAATGCTGCTCTTTTCTTGGATTGCAATCTCAAGGAGTTGGAGGTGAAGCCGTTGAAGATTGTATAAGGGAAAAGATCATTGCAGTAGTAGAAATGCATGACAGAGAGCCCCAGAGAAGCAAAGAAATGCCAACTTTTCTTTTCGAGGATGATCACTTGCAGGAATTGGGGTCTCAAGACGGGGAATATGAAGGAGAGGGTGCATTTGGCTCTATGGATATATGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0000793 GO:0003006 GO:0003674 GO:0003824 GO:0003916 GO:0003918 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007127 GO:0007131 GO:0007275 GO:0007276 GO:0008094 GO:0008150 GO:0008152 GO:0009553 GO:0009555 GO:0009561 GO:0009653 GO:0009790 GO:0009987 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016853 GO:0016887 GO:0017111 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0030154 GO:0030674 GO:0032501 GO:0032502 GO:0032504 GO:0034641 GO:0035825 GO:0042138 GO:0042623 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044703 GO:0046483 GO:0048229 GO:0048232 GO:0048235 GO:0048285 GO:0048314 GO:0048598 GO:0048609 GO:0048856 GO:0048869 GO:0051321 GO:0051704 GO:0055046 GO:0060090 GO:0061505 GO:0061982 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0140013 GO:0140097 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

477

Amino Acids

52.36

Weight (kDa)

5.44

Isoelectric Point (pI)

50.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006786)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60460 AT1G60460 AT1G60460 AT1G60460 AT1G60460
fragaria_vesca	FvH4_4g34180 FvH4_4g34230 FvH4_4g34230 FvH4_4g34230
malus_domestica	MD16G1094900.v1.1
prunus_persica	Prupe.1G251700_v2.0.a1 Prupe.1G251700_v2.0.a1 Prupe.1G251700_v2.0.a1
pyrus_communis	pycom16g08070
rosa_chinensis	RchiOBHm_Chr4g0443681 RchiOBHm_Chr4g0443691 RchiOBHm_Chr7g0214331
rosa_laevigata	RLG00000005902
rosa_multiflora	Rmu_sc0001426.1_g000015 Rmu_sc0001426.1_g000016
rosa_roxburghii	Rroxscaffold_5G00384230
rosa_samantha	Rh4AG406200 Rh4BG417200 Rh4CG431700 Rh4DG412800
rosa_wichuraiana	Rw4G034880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	172
AccBSI	CCGCTC	1 cut(s)	129
AccII	CGCG	4 cut(s)	218, 1027, 1151, 1190
AciI	CCGC	6 cut(s)	64, 113, 127, 737, 924, 1190
AclI	AACGTT	1 cut(s)	580
AclWI	GGATC	6 cut(s)	116, 436, 451, 514, 730, 924
AcsI	RAATTY	2 cut(s)	138, 222
AcuI	CTGAAG	2 cut(s)	393, 878
AdeI	CACNNNGTG	1 cut(s)	834
AfaI	GTAC	3 cut(s)	378, 775, 815
AfeI	AGCGCT	1 cut(s)	107
AfiI	CCNNNNNNNGG	2 cut(s)	70, 162
AflII	CTTAAG	1 cut(s)	344
AflIII	ACRYGT	1 cut(s)	788
AgeI	ACCGGT	1 cut(s)	254
AhdI	GACNNNNNGTC	1 cut(s)	92
AjiI	CACGTC	1 cut(s)	69
AjnI	CCWGG	3 cut(s)	326, 502, 718
AluBI	AGCT	7 cut(s)	168, 196, 795, 869, 900, 1063, 1134
AluI	AGCT	7 cut(s)	168, 196, 795, 869, 900, 1063, 1134
Alw26I	GTCTC	3 cut(s)	151, 310, 1380
AlwI	GGATC	6 cut(s)	116, 436, 451, 514, 730, 924
Aor51HI	AGCGCT	1 cut(s)	107
ApeKI	GCWGC	7 cut(s)	168, 331, 412, 563, 689, 696, 1209
ApoI	RAATTY	2 cut(s)	138, 222
AseI	ATTAAT	1 cut(s)	38
AsiGI	ACCGGT	1 cut(s)	254
AspLEI	GCGC	4 cut(s)	108, 173, 218, 220
AspS9I	GGNCC	2 cut(s)	76, 1126
AsuHPI	GGTGA	3 cut(s)	275, 751, 1259
AsuII	TTCGAA	1 cut(s)	393
AsuNHI	GCTAGC	1 cut(s)	869
AvaII	GGWCC	2 cut(s)	76, 1126
BaeGI	GKGCMC	2 cut(s)	839, 1114
BaeI	ACNNNNGTAYC	2 cut(s)	144, 177
BanII	GRGCYC	1 cut(s)	1314
BarI	GAAGNNNNNNTAC	2 cut(s)	1073, 1105
BauI	CACGAG	1 cut(s)	995
BbsI	GAAGAC	2 cut(s)	606, 1170
BbvI	GCAGC	7 cut(s)	155, 318, 399, 575, 683, 701, 1196
BccI	CCATC	5 cut(s)	14, 224, 724, 967, 1015
BceAI	ACGGC	3 cut(s)	100, 1103, 1238
BcgI	CGANNNNNNTGC	2 cut(s)	1188, 1222
BciT130I	CCWGG	3 cut(s)	328, 504, 720
BciVI	GTATCC	2 cut(s)	145, 726
BclI	TGATCA	2 cut(s)	1033, 1354
BcoDI	GTCTC	3 cut(s)	151, 310, 1380
BfaI	CTAG	3 cut(s)	510, 870, 1164
BfmI	CTRYAG	1 cut(s)	82
BfoI	RGCGCY	1 cut(s)	109
BfrI	CTTAAG	1 cut(s)	344
BfuI	GTATCC	2 cut(s)	145, 726
BisI	GCNGC	9 cut(s)	64, 169, 332, 413, 564, 690, 697, 925, 1210
BlsI	GCNGC	9 cut(s)	65, 170, 333, 414, 565, 691, 698, 926, 1211
BmcAI	AGTACT	1 cut(s)	775
Bme1390I	CCNGG	3 cut(s)	328, 504, 720
Bme18I	GGWCC	2 cut(s)	76, 1126
BmeRI	GACNNNNNGTC	1 cut(s)	92
BmgBI	CACGTC	1 cut(s)	69
BmgT120I	GGNCC	2 cut(s)	76, 1126
BmiI	GGNNCC	1 cut(s)	548
BmrFI	CCNGG	3 cut(s)	328, 504, 720
BmsI	GCATC	3 cut(s)	50, 487, 676
BmtI	GCTAGC	1 cut(s)	873
BpiI	GAAGAC	2 cut(s)	606, 1170
BpmI	CTGGAG	1 cut(s)	1116
Bpu14I	TTCGAA	1 cut(s)	393
BpuEI	CTTGAG	5 cut(s)	86, 640, 656, 1218, 1362
Bsa29I	ATCGAT	1 cut(s)	972
BsaAI	YACGTR	1 cut(s)	517
BsaBI	GATNNNNATC	2 cut(s)	1038, 1228
BsaI	GGTCTC	1 cut(s)	1380
BsaJI	CCNNGG	1 cut(s)	782
BsaWI	WCCGGW	1 cut(s)	254
Bsc4I	CCNNNNNNNGG	2 cut(s)	70, 162
Bse118I	RCCGGY	2 cut(s)	155, 254
Bse1I	ACTGG	4 cut(s)	286, 483, 771, 884
Bse3DI	GCAATG	1 cut(s)	1281
Bse8I	GATNNNNATC	2 cut(s)	1038, 1228
BseBI	CCWGG	3 cut(s)	328, 504, 720
BseCI	ATCGAT	1 cut(s)	972
BseDI	CCNNGG	1 cut(s)	782
BseGI	GGATG	3 cut(s)	235, 502, 1357
BseJI	GATNNNNATC	2 cut(s)	1038, 1228
BseLI	CCNNNNNNNGG	2 cut(s)	70, 162
BseMI	GCAATG	1 cut(s)	1281
BseMII	CTCAG	1 cut(s)	795
BseNI	ACTGG	4 cut(s)	286, 483, 771, 884
BsePI	GCGCGC	1 cut(s)	216
BseRI	GAGGAG	1 cut(s)	191
BseSI	GKGCMC	2 cut(s)	839, 1114
BseXI	GCAGC	7 cut(s)	155, 318, 399, 575, 683, 701, 1196
BsgI	GTGCAG	1 cut(s)	682
Bsh1236I	CGCG	4 cut(s)	218, 1027, 1151, 1190
BshTI	ACCGGT	1 cut(s)	254
BshVI	ATCGAT	1 cut(s)	972
BsiSI	CCGG	2 cut(s)	156, 255
BslFI	GGGAC	2 cut(s)	382, 959
BslI	CCNNNNNNNGG	2 cut(s)	70, 162
BsmAI	GTCTC	3 cut(s)	151, 310, 1380
BsmBI	CGTCTC	1 cut(s)	310
BsmFI	GGGAC	2 cut(s)	382, 959
BsmI	GAATGC	1 cut(s)	1211
Bso31I	GGTCTC	1 cut(s)	1380
Bsp119I	TTCGAA	1 cut(s)	393
Bsp1286I	GDGCHC	3 cut(s)	839, 1114, 1314
Bsp68I	TCGCGA	1 cut(s)	1151
BspACI	CCGC	6 cut(s)	64, 113, 127, 737, 924, 1190
BspCNI	CTCAG	1 cut(s)	796
BspDI	ATCGAT	1 cut(s)	972
BspFNI	CGCG	4 cut(s)	218, 1027, 1151, 1190
BspLI	GGNNCC	1 cut(s)	548
BspMAI	CTGCAG	1 cut(s)	86
BspOI	GCTAGC	1 cut(s)	873
BspPI	GGATC	6 cut(s)	116, 436, 451, 514, 730, 924
BspT104I	TTCGAA	1 cut(s)	393
BspTI	CTTAAG	1 cut(s)	344
BspTNI	GGTCTC	1 cut(s)	1380
BsrBI	CCGCTC	1 cut(s)	129
BsrDI	GCAATG	1 cut(s)	1281
BsrFI	RCCGGY	2 cut(s)	155, 254
BsrI	ACTGG	4 cut(s)	286, 483, 771, 884
BssAI	RCCGGY	2 cut(s)	155, 254
BssECI	CCNNGG	1 cut(s)	782
BssHII	GCGCGC	1 cut(s)	216
BssSI	CACGAG	1 cut(s)	995
Bst2BI	CACGAG	1 cut(s)	995
Bst2UI	CCWGG	3 cut(s)	328, 504, 720
Bst4CI	ACNGT	2 cut(s)	321, 834
BstAFI	CTTAAG	1 cut(s)	344
BstBAI	YACGTR	1 cut(s)	517
BstBI	TTCGAA	1 cut(s)	393
BstC8I	GCNNGC	6 cut(s)	32, 218, 417, 694, 871, 1065
BstDEI	CTNAG	2 cut(s)	804, 1106
BstF5I	GGATG	3 cut(s)	235, 502, 1357
BstFNI	CGCG	4 cut(s)	218, 1027, 1151, 1190
BstH2I	RGCGCY	1 cut(s)	109
BstHHI	GCGC	4 cut(s)	108, 173, 218, 220
BstMAI	GTCTC	3 cut(s)	151, 310, 1380
BstMWI	GCNNNNNNNGC	7 cut(s)	112, 165, 215, 648, 705, 906, 1024
BstNI	CCWGG	3 cut(s)	328, 504, 720
BstNSI	RCATGY	2 cut(s)	696, 792
BstSCI	CCNGG	3 cut(s)	326, 502, 718
BstSFI	CTRYAG	1 cut(s)	82
BstSLI	GKGCMC	2 cut(s)	839, 1114
BstSNI	TACGTA	1 cut(s)	517
BstUI	CGCG	4 cut(s)	218, 1027, 1151, 1190
BstV1I	GCAGC	7 cut(s)	155, 318, 399, 575, 683, 701, 1196
BstV2I	GAAGAC	2 cut(s)	606, 1170
BstX2I	RGATCY	3 cut(s)	441, 456, 506
BstXI	CCANNNNNNTGG	1 cut(s)	365
BstYI	RGATCY	3 cut(s)	441, 456, 506
Bsu15I	ATCGAT	1 cut(s)	972
BsuI	GTATCC	2 cut(s)	145, 726
BsuTUI	ATCGAT	1 cut(s)	972
BtrI	CACGTC	1 cut(s)	69
BtsCI	GGATG	3 cut(s)	235, 502, 1357
BtsIMutI	CAGTG	2 cut(s)	370, 732
BtuMI	TCGCGA	1 cut(s)	1151
Cac8I	GCNNGC	6 cut(s)	32, 218, 417, 694, 871, 1065
CfoI	GCGC	4 cut(s)	108, 173, 218, 220
Cfr10I	RCCGGY	2 cut(s)	155, 254
Cfr13I	GGNCC	2 cut(s)	76, 1126
ClaI	ATCGAT	1 cut(s)	972
CseI	GACGC	3 cut(s)	297, 1033, 1196
Csp6I	GTAC	3 cut(s)	377, 774, 814
CspAI	ACCGGT	1 cut(s)	254
CspCI	CAANNNNNGTGG	2 cut(s)	241, 276
CviAII	CATG	7 cut(s)	448, 617, 648, 693, 789, 1115, 1301
CviQI	GTAC	3 cut(s)	377, 774, 814
DdeI	CTNAG	2 cut(s)	804, 1106
DraIII	CACNNNGTG	1 cut(s)	834
DriI	GACNNNNNGTC	1 cut(s)	92
Eam1105I	GACNNNNNGTC	1 cut(s)	92
EciI	GGCGGA	1 cut(s)	102
Eco105I	TACGTA	1 cut(s)	517
Eco24I	GRGCYC	1 cut(s)	1314
Eco31I	GGTCTC	1 cut(s)	1380
Eco47I	GGWCC	2 cut(s)	76, 1126
Eco47III	AGCGCT	1 cut(s)	107
Eco57I	CTGAAG	2 cut(s)	393, 878
EcoO109I	RGGNCCY	1 cut(s)	76
EcoRII	CCWGG	3 cut(s)	326, 502, 718
EcoT22I	ATGCAT	1 cut(s)	1302
EcoT38I	GRGCYC	1 cut(s)	1314
Esp3I	CGTCTC	1 cut(s)	310
FaeI	CATG	7 cut(s)	451, 620, 651, 696, 792, 1118, 1304
FaqI	GGGAC	2 cut(s)	382, 959
FatI	CATG	7 cut(s)	447, 616, 647, 692, 788, 1114, 1300
FauI	CCCGC	1 cut(s)	134
FbaI	TGATCA	2 cut(s)	1033, 1354
Fnu4HI	GCNGC	9 cut(s)	64, 169, 332, 413, 564, 690, 697, 925, 1210
FokI	GGATG	3 cut(s)	242, 509, 1364
FriOI	GRGCYC	1 cut(s)	1314
Fsp4HI	GCNGC	9 cut(s)	64, 169, 332, 413, 564, 690, 697, 925, 1210
FspBI	CTAG	3 cut(s)	510, 870, 1164
FspI	TGCGCA	1 cut(s)	172
GlaI	GCGC	4 cut(s)	107, 172, 217, 219
GluI	GCNGC	9 cut(s)	64, 169, 332, 413, 564, 690, 697, 925, 1210
GsuI	CTGGAG	1 cut(s)	1116
HaeII	RGCGCY	1 cut(s)	109
HapII	CCGG	2 cut(s)	156, 255
HgaI	GACGC	3 cut(s)	297, 1033, 1196
HhaI	GCGC	4 cut(s)	108, 173, 218, 220
Hin1II	CATG	7 cut(s)	451, 620, 651, 696, 792, 1118, 1304
Hin6I	GCGC	4 cut(s)	106, 171, 216, 218
HinP1I	GCGC	4 cut(s)	106, 171, 216, 218
HincII	GTYRAC	1 cut(s)	324
HindII	GTYRAC	1 cut(s)	324
HindIII	AAGCTT	2 cut(s)	194, 1061
HinfI	GANTC	5 cut(s)	87, 292, 354, 644, 1039
HpaII	CCGG	2 cut(s)	156, 255
HphI	GGTGA	3 cut(s)	275, 751, 1259
Hpy166II	GTNNAC	1 cut(s)	324
Hpy188III	TCNNGA	6 cut(s)	460, 510, 575, 673, 1150, 1379
Hpy8I	GTNNAC	1 cut(s)	324
Hpy99I	CGWCG	3 cut(s)	49, 73, 313
HpyAV	CCTTC	6 cut(s)	107, 345, 705, 853, 1075, 1388
HpyCH4III	ACNGT	2 cut(s)	321, 834
HpyCH4IV	ACGT	5 cut(s)	68, 379, 516, 580, 606
HpyF10VI	GCNNNNNNNGC	7 cut(s)	112, 165, 215, 648, 705, 906, 1024
HpyF3I	CTNAG	2 cut(s)	804, 1106
HpySE526I	ACGT	5 cut(s)	68, 379, 516, 580, 606
Hsp92II	CATG	7 cut(s)	451, 620, 651, 696, 792, 1118, 1304
HspAI	GCGC	4 cut(s)	106, 171, 216, 218
Ksp22I	TGATCA	2 cut(s)	1033, 1354
LmnI	GCTCC	6 cut(s)	134, 165, 505, 664, 686, 906
Lsp1109I	GCAGC	7 cut(s)	155, 318, 399, 575, 683, 701, 1196
LweI	GCATC	3 cut(s)	50, 487, 676
MaeI	CTAG	3 cut(s)	510, 870, 1164
MaeII	ACGT	5 cut(s)	68, 379, 516, 580, 606
MaeIII	GTNAC	2 cut(s)	244, 887
MbiI	CCGCTC	1 cut(s)	129
MboII	GAAGA	7 cut(s)	451, 466, 611, 1094, 1170, 1214, 1271
MfeI	CAATTG	1 cut(s)	471
MflI	RGATCY	3 cut(s)	441, 456, 506
MhlI	GDGCHC	3 cut(s)	839, 1114, 1314
MlyI	GAGTC	3 cut(s)	81, 348, 653
MmeI	TCCRAC	3 cut(s)	51, 741, 1222
Mph1103I	ATGCAT	1 cut(s)	1302
MseI	TTAA	7 cut(s)	38, 345, 584, 612, 1047, 1059, 1429
MspCI	CTTAAG	1 cut(s)	344
MspI	CCGG	2 cut(s)	156, 255
MspR9I	CCNGG	3 cut(s)	328, 504, 720
MunI	CAATTG	1 cut(s)	471
Mva1269I	GAATGC	1 cut(s)	1211
MvaI	CCWGG	3 cut(s)	328, 504, 720
MvnI	CGCG	4 cut(s)	218, 1027, 1151, 1190
MwoI	GCNNNNNNNGC	7 cut(s)	112, 165, 215, 648, 705, 906, 1024
NheI	GCTAGC	1 cut(s)	869
NlaIII	CATG	7 cut(s)	451, 620, 651, 696, 792, 1118, 1304
NlaIV	GGNNCC	1 cut(s)	548
NmuCI	GTSAC	1 cut(s)	244
NruI	TCGCGA	1 cut(s)	1151
NsbI	TGCGCA	1 cut(s)	172
NsiI	ATGCAT	1 cut(s)	1302
NspI	RCATGY	2 cut(s)	696, 792
NspV	TTCGAA	1 cut(s)	393
PaeI	GCATGC	1 cut(s)	696
PauI	GCGCGC	1 cut(s)	216
PciI	ACATGT	1 cut(s)	788
PctI	GAATGC	1 cut(s)	1211
PfeI	GAWTC	2 cut(s)	292, 1039
PfoI	TCCNGGA	2 cut(s)	502, 718
PinAI	ACCGGT	1 cut(s)	254
PkrI	GCNGC	9 cut(s)	65, 170, 333, 414, 565, 691, 698, 926, 1211
PleI	GAGTC	3 cut(s)	81, 348, 652
PpsI	GAGTC	3 cut(s)	81, 348, 652
Ppu21I	YACGTR	1 cut(s)	517
PpuMI	RGGWCCY	1 cut(s)	76
PscI	ACATGT	1 cut(s)	788
PshBI	ATTAAT	1 cut(s)	38
Psp1406I	AACGTT	1 cut(s)	580
Psp5II	RGGWCCY	1 cut(s)	76
Psp6I	CCWGG	3 cut(s)	326, 502, 718
PspGI	CCWGG	3 cut(s)	326, 502, 718
PspN4I	GGNNCC	1 cut(s)	548
PspPI	GGNCC	2 cut(s)	76, 1126
PspPPI	RGGWCCY	1 cut(s)	76
PstI	CTGCAG	1 cut(s)	86
PsuI	RGATCY	3 cut(s)	441, 456, 506
PteI	GCGCGC	1 cut(s)	216
RruI	TCGCGA	1 cut(s)	1151
RsaI	GTAC	3 cut(s)	378, 775, 815
RsaNI	GTAC	3 cut(s)	377, 774, 814
SaqAI	TTAA	7 cut(s)	38, 345, 584, 612, 1047, 1059, 1429
SatI	GCNGC	9 cut(s)	64, 169, 332, 413, 564, 690, 697, 925, 1210
Sau96I	GGNCC	2 cut(s)	76, 1126
ScaI	AGTACT	1 cut(s)	775
SchI	GAGTC	3 cut(s)	81, 348, 653
ScrFI	CCNGG	3 cut(s)	328, 504, 720
SduI	GDGCHC	3 cut(s)	839, 1114, 1314
SfaNI	GCATC	3 cut(s)	50, 487, 676
SfcI	CTRYAG	1 cut(s)	82
SfuI	TTCGAA	1 cut(s)	393
SinI	GGWCC	2 cut(s)	76, 1126
SmlI	CTYRAG	6 cut(s)	101, 344, 655, 671, 1233, 1377
SmoI	CTYRAG	6 cut(s)	101, 344, 655, 671, 1233, 1377
SnaBI	TACGTA	1 cut(s)	517
SphI	GCATGC	1 cut(s)	696
SsiI	CCGC	6 cut(s)	64, 113, 127, 737, 924, 1190
SspMI	CTAG	3 cut(s)	510, 870, 1164
StyD4I	CCNGG	3 cut(s)	326, 502, 718
TaaI	ACNGT	2 cut(s)	321, 834
TaiI	ACGT	5 cut(s)	71, 382, 519, 583, 609
TaqI	TCGA	4 cut(s)	393, 797, 972, 1347
TatI	WGTACW	2 cut(s)	773, 813
TauI	GCSGC	2 cut(s)	66, 927
TfiI	GAWTC	2 cut(s)	292, 1039
Tru1I	TTAA	7 cut(s)	38, 345, 584, 612, 1047, 1059, 1429
Tru9I	TTAA	7 cut(s)	38, 345, 584, 612, 1047, 1059, 1429
TscAI	CASTG	2 cut(s)	370, 732
TseFI	GTSAC	1 cut(s)	244
TseI	GCWGC	7 cut(s)	168, 331, 412, 563, 689, 696, 1209
Tsp45I	GTSAC	1 cut(s)	244
TspDTI	ATGAA	1 cut(s)	1407
TspGWI	ACGGA	4 cut(s)	82, 121, 906, 1118
TspRI	CASTG	2 cut(s)	370, 732
Vha464I	CTTAAG	1 cut(s)	344
VpaK11BI	GGWCC	2 cut(s)	76, 1126
VspI	ATTAAT	1 cut(s)	38
XapI	RAATTY	2 cut(s)	138, 222
XbaI	TCTAGA	1 cut(s)	509
XceI	RCATGY	2 cut(s)	696, 792
XspI	CTAG	3 cut(s)	510, 870, 1164
ZrmI	AGTACT	1 cut(s)	775
Zsp2I	ATGCAT	1 cut(s)	1302

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.