RchiOBHm_Chr7g0214331

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
31586890 .. 31587159
270 bp
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UTR
Exon/CDS
Intron
PRQ19178

Sequence Viewer

Length: 186 bp
ATGTTAAAACTCCCATTGTATATATCTACCAGAAGGTTTACTAGGCTGCTGTCTTTGAATCCTGAGAAGGGGCAGAAATTCAGGTACAAAAATCGGTTTACCACTGTGTTGGTGAAATTGTTTAAATGTGGTTTAATTGCTTCATGGTTGGAAACAAAGAACAGTGGGAGACAGTATGTCCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

61

Amino Acids

7.29

Weight (kDa)

10.81

Isoelectric Point (pI)

18.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 77
AfaI GTAC 1 cut(s) 86
AfiI CCNNNNNNNGG 1 cut(s) 68
AgsI TTSAA 1 cut(s) 58
AhdI GACNNNNNGTC 1 cut(s) 176
Alw26I GTCTC 1 cut(s) 163
ApeKI GCWGC 1 cut(s) 46
ApoI RAATTY 1 cut(s) 77
AsuHPI GGTGA 1 cut(s) 124
BbvI GCAGC 1 cut(s) 33
BcoDI GTCTC 1 cut(s) 163
BfaI CTAG 1 cut(s) 42
BisI GCNGC 1 cut(s) 47
BlsI GCNGC 1 cut(s) 48
BmeRI GACNNNNNGTC 1 cut(s) 176
Bsc4I CCNNNNNNNGG 1 cut(s) 68
BseLI CCNNNNNNNGG 1 cut(s) 68
BseMII CTCAG 1 cut(s) 54
BseXI GCAGC 1 cut(s) 33
BslI CCNNNNNNNGG 1 cut(s) 68
BsmAI GTCTC 1 cut(s) 163
BspCNI CTCAG 1 cut(s) 55
Bst4CI ACNGT 3 cut(s) 106, 164, 174
BstDEI CTNAG 1 cut(s) 63
BstMAI GTCTC 1 cut(s) 163
BstV1I GCAGC 1 cut(s) 33
BstXI CCANNNNNNTGG 1 cut(s) 109
BtsIMutI CAGTG 2 cut(s) 102, 169
Csp6I GTAC 1 cut(s) 85
CviAII CATG 1 cut(s) 144
CviJI RGCY 1 cut(s) 46
CviKI_1 RGCY 1 cut(s) 46
CviQI GTAC 1 cut(s) 85
DdeI CTNAG 1 cut(s) 63
DraI TTTAAA 1 cut(s) 124
DriI GACNNNNNGTC 1 cut(s) 176
Eam1105I GACNNNNNGTC 1 cut(s) 176
FaeI CATG 1 cut(s) 147
FaiI YATR 4 cut(s) 21, 23, 145, 177
FatI CATG 1 cut(s) 143
Fnu4HI GCNGC 1 cut(s) 47
Fsp4HI GCNGC 1 cut(s) 47
FspBI CTAG 1 cut(s) 42
GluI GCNGC 1 cut(s) 47
Hin1II CATG 1 cut(s) 147
HinfI GANTC 1 cut(s) 58
HphI GGTGA 1 cut(s) 124
Hpy166II GTNNAC 2 cut(s) 39, 99
Hpy188III TCNNGA 1 cut(s) 62
Hpy8I GTNNAC 2 cut(s) 39, 99
HpyAV CCTTC 2 cut(s) 27, 61
HpyCH4III ACNGT 3 cut(s) 106, 164, 174
HpyF3I CTNAG 1 cut(s) 63
Hsp92II CATG 1 cut(s) 147
LpnPI CCDG 3 cut(s) 43, 67, 75
Lsp1109I GCAGC 1 cut(s) 33
MaeI CTAG 1 cut(s) 42
MluCI AATT 3 cut(s) 77, 116, 135
MmeI TCCRAC 1 cut(s) 129
MseI TTAA 3 cut(s) 5, 123, 134
NlaIII CATG 1 cut(s) 147
PfeI GAWTC 1 cut(s) 58
PkrI GCNGC 1 cut(s) 48
RsaI GTAC 1 cut(s) 86
RsaNI GTAC 1 cut(s) 85
SaqAI TTAA 3 cut(s) 5, 123, 134
SatI GCNGC 1 cut(s) 47
SetI ASST 2 cut(s) 38, 86
SgeI CNNG 5 cut(s) 42, 54, 74, 94, 156
Sse9I AATT 3 cut(s) 77, 116, 135
SspMI CTAG 1 cut(s) 42
TaaI ACNGT 3 cut(s) 106, 164, 174
TasI AATT 3 cut(s) 77, 116, 135
TfiI GAWTC 1 cut(s) 58
Tru1I TTAA 3 cut(s) 5, 123, 134
Tru9I TTAA 3 cut(s) 5, 123, 134
TscAI CASTG 2 cut(s) 109, 169
TseI GCWGC 1 cut(s) 46
TspDTI ATGAA 1 cut(s) 132
TspRI CASTG 2 cut(s) 109, 169
XapI RAATTY 1 cut(s) 77
XspI CTAG 1 cut(s) 42
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.