Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0011441

Physical Location & Seq

Genomic Coordinates Forward (+)

29383175 .. 29389259

Gene Structure 6085 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1245400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2844 bp

ATGAATGATTCTACCGGGACAACGGCGTCGTCTTTGGCGATAGCAGAGAAGAAGACGCATAGGCCGGGTGGTTGCGTCGGCATTTTCTTCCAGCTCTTCGACTGGAACCGCAGGTTCGCCAAGAAGAAGCTCTTCTCCAAGAAATTGCTTCCTCCATCTCGAGGAGCAAACAAAGTTTCCAAGAAGTTTAGAGATGAGAAAATGCCGGTTTCGAAGCTTCATTTGATTGCTGATGAAAACCGTGGGGGTTTCCCAAATGCGAAGAAAAATGTGAATCGTAGCGTTGATTTTGAGCACAAGCATGAATTGCGAGCTCCAAGTTTGGTTGCTAGACTTATGGGACTTGAATCCATGCCCGCCACACGCGAGAAGCCCAAGAAAGCTTCCTTTGCTGATGTTAGGGGCAGCGGAGAGAAGACATTTGTGAATAACCATAGTGGTAATGATAGAGATGAATTGAATTTGGAGACAGAAAATGCAAAGCCTGAATCAAGGCCTCAGAAGCTGCAGAAAATGGGACCGTATGAGAAGAGGGCAGTGACTAGGTTTGGAGCCGAGGCACTTCAAATTAAGAGTGTTTTGTCGCGCTCGAGAAAGCATCACCCAAAGCTTGCTTCTCCAGTGAAGAGTTCAAGGATTTCCTCTGGGAAGAATTCTTCGCGCACTTCTCGGTTGATTGATGCTGCTACTAGAATTTTGGAACCTGGACTTCAGTCTACGAATAGAGCAAGGGGTGCTCTCACTTACTCACGTTCTTTTCATTATCCTCTAGTGGATGAGGTTGTGGAAGATGGAACAGCAGTTCAATCACTGGGGATTTCTAATCAAGCATGTTATAATGGTGGTGCAGTCAACTCTATGATGGGCCAAACTTCTTGCAAAAGTTGTGGTAATTTAGTAGATGTGGACGTGACATCAAATGTGGAGGAACAACAACCTGCGTTCCCATCCTTTGCTTCAAACTTAGTCAATAGCTCTTCGCTGGTAGCAGAACAAAGGCCAAAGTCATCCATATCCTCCTTGGGGCAAGAAAATGATGCAATTTTTCAGGGAACTAGGAACCAACCTGTATCAGTTCGTGGTCAAAAGAAAATACTATCCATAGGTGAACCTGTCACAGAAGGGAAGTCTCTGCCACCAGAAGGTCTAGCTTCATGGCAGTTGTCGTCAAGTGAACCATGCAAGCCTCAAAATGGAGAAGCATCTTCTATTACCTCAAAGAATAGGTCTCAGATGCAGCATCGAATGTCACTAGGAAGAGAAAGGATTCCACCCAGATCCAAACTAAATAGTCTTGATGGCAGAAGAGCCTCATCCGCTGCAAATGCTGTTAGAGGGACAAAAGACTTTGTTGCCTTGAACCGGAATCTGAGTGGTCGTGCCCAACCGAGGGTGCCTACCAAGGTGAACGATTCTAAGTTAGACACAGAGAGGAAAACTTTTCCTGGAAAAGATGACTACCCATCACAGCTAAGGACAACAATACGGAAAAGGAGGATGATCAATGGTAGTGGCCAAGTTGAAAGTAGTGGTTTTGTTAGTTCAACTTCCACAAGACAGGAGAATTATCAGTTTGATAAGTCAACTGGAAAAGGATTAGGAAATGGTGCTCATTTGATGGACCACACTTCTGCTAGGAATAAATTAGCCGGTCGGAGAGAAGGTAACAAAGCAAATGGAAATGAGGACACTGATGTTATTTCATTCACATTTAATTCCCCTATCAGGAACAAGACTGGAAACCCTACAGGAATGCAAGGTACAAGCATAGACAATTGCATCAAGTCCCCTCCCCAAGAACCATTGCCATTGAGTGGAGATGATATTGGTGCCCTTCTGGAACAAAAACTGAGGGAGCTTGCTTGTCAAGAAGATGATGACATGGCAACAGGTGCTTCATCCAAGAGGTCCACTGCTATGATTCTCCAAGAGCTAATATCTGCCTTGTCTGCAGATCGTTCTCTTTCTCACGACGGACACATGGCCAATACAGATATAGCATCACCTGCTCGTGGAAAGACTGATAGATCAGTTGGAATCTGTCATGATGGTCATCATTTGAGCCCTGGGTCTGTTCTTGAAGCTTCATTTTCTTCTAGTAGTCTGGATGATAGCTCAGGGAATAGGTCCGTCTACCATCACTCAACGGATTACTCTGATGATCCATTGCAATTGGGTCATGATACTGATAGTGTAGACTCTGCCACTTCAGTGGACAAAAATAAGACTGGCAGTGAGATAATAACTGCTCTTTTCAATAATGTATCGAGGATATTGCATAGCATCGATGCTGGTGGGGAAAGATTGAGTGGAGGCAAGCTCACCCATGCAAATGAAGTTATATTGAATGCTGAACTATTGTTTGGAGATTTGACTCTGCACAGCAAGGGGAACATAATGGAAGGTCTTTTCATCAGTTCCTTGCCTCTTGATCTGGAAACTATTGCTGACACCTTGATGACAAAATTCTGTGTGTTCAGTAGTTTTGGGGACATCAAAGAACTTGGTGAATTCCTTTTTGACTTTGTCATAGAGTACTTAGACTCAAAATATGGCCGGTGCTGCAATTCCGGATTCAGATTTTGGGAAAAACTCCCCGTAGGCATGAACCAGAAGTTGATGATTCAAGAGGTTCAGGAGGGGATTCAGAAGTGGACGGATTTGGCTGGAATGATTCCTGATGAGTTGATAGAATGGGATATGAGTCATGCCCTGGGTAAGTGGACAGATTTTAATACCGAAGCTTTTGAGATCGGTTCTGAAATTGACGGAGACATTCTTCAAAGTTTGGTTAATGAAGTTGTGATCGACTTATGCGAGTGCCAGCTGCTGGGTTCCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4378 VARLMGL

Protein Analysis

948

Amino Acids

103.49

Weight (kDa)

8.37

Isoelectric Point (pI)

45.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VARLMGL	PF14383	98 - 121	4.3e-11	DUF761-associated sequence motif
DUF4378	PF14309	838 - 933	1.2e-17	Domain of unknown function (DUF4378)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011441)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67040 AT1G67040
malus_domestica	MD09G1253500.v1.1 MD09G1253600.v1.1 MD17G1245400.v1.1
prunus_persica	Prupe.3G143500_v2.0.a1
pyrus_communis	pycom09g16950 pycom17g24780 pycom17g24790
rosa_chinensis	RchiOBHm_Chr2g0126071
rosa_laevigata	RLG00000018886
rosa_multiflora	Rmu_sc0001506.1_g000003
rosa_roxburghii	Rroxscaffold_2G00117460
rosa_rugosa	Rorug02G0260600 Rorug02G0260700
rosa_samantha	Rh2AG318100 Rh2BG326500 Rh2DG344500 Rh2DG344600
rosa_wichuraiana	Rw2G025760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	837
AarI	CACCTGC	1 cut(s)	2014
AasI	GACNNNNNNGTC	1 cut(s)	25
Acc36I	ACCTGC	3 cut(s)	102, 946, 2014
AccB1I	GGYRCC	2 cut(s)	1393, 1829
AccB7I	CCANNNNNTGG	2 cut(s)	1814, 2830
AccI	GTMKAC	3 cut(s)	716, 2133, 2196
AccII	CGCG	3 cut(s)	366, 586, 661
AccIII	TCCGGA	1 cut(s)	2570
AciI	CCGC	4 cut(s)	109, 357, 408, 1317
AclWI	GGATC	2 cut(s)	1272, 2156
AcoI	YGGCCR	3 cut(s)	1513, 1983, 2554
AcsI	RAATTY	5 cut(s)	460, 652, 693, 2465, 2510
AcuI	CTGAAG	2 cut(s)	695, 2193
AcyI	GRCGYC	1 cut(s)	26
AfaI	GTAC	2 cut(s)	1762, 2537
AjiI	CACGTC	1 cut(s)	910
AjnI	CCWGG	4 cut(s)	703, 1444, 2065, 2712
AjuI	GAANNNNNNNTTGG	4 cut(s)	598, 630, 2346, 2378
AleI	CACNNNNGTG	1 cut(s)	2210
AloI	GAACNNNNNNTCC	2 cut(s)	786, 818
Alw21I	GWGCWC	4 cut(s)	297, 316, 739, 1612
Alw26I	GTCTC	4 cut(s)	461, 1134, 1233, 2766
AlwI	GGATC	2 cut(s)	1272, 2156
AlwNI	CAGNNNCTG	2 cut(s)	505, 2830
Ama87I	CYCGRG	2 cut(s)	159, 589
Aor13HI	TCCGGA	1 cut(s)	2570
AoxI	GGCC	7 cut(s)	62, 494, 865, 998, 1513, 1983, 2554
ApeKI	GCWGC	7 cut(s)	405, 505, 683, 1237, 1319, 2562, 2827
ApoI	RAATTY	5 cut(s)	460, 652, 693, 2465, 2510
ArsI	GACNNNNNNTTYG	2 cut(s)	1211, 1243
Asp700I	GAANNNNTTC	2 cut(s)	131, 1266
AspLEI	GCGC	2 cut(s)	588, 663
AspS9I	GGNCC	5 cut(s)	518, 865, 1621, 1908, 2127
AsuC2I	CCSGG	2 cut(s)	16, 66
AsuHPI	GGTGA	6 cut(s)	593, 1118, 1417, 1995, 2314, 2519
AsuII	TTCGAA	1 cut(s)	212
AvaI	CYCGRG	2 cut(s)	159, 589
AvaII	GGWCC	4 cut(s)	518, 1621, 1908, 2127
BaeGI	GKGCMC	2 cut(s)	1384, 1834
BalI	TGGCCA	2 cut(s)	1515, 1985
BanI	GGYRCC	2 cut(s)	1393, 1829
BanII	GRGCYC	2 cut(s)	316, 2066
BauI	CACGAG	1 cut(s)	2010
BbsI	GAAGAC	2 cut(s)	59, 422
Bbv12I	GWGCWC	4 cut(s)	297, 316, 739, 1612
BbvI	GCAGC	7 cut(s)	417, 492, 670, 1249, 1306, 2549, 2814
BccI	CCATC	9 cut(s)	163, 785, 856, 955, 1292, 1471, 1612, 2042, 2145
BceAI	ACGGC	1 cut(s)	39
BcgI	CGANNNNNNTGC	2 cut(s)	2257, 2291
BciT130I	CCWGG	4 cut(s)	705, 1446, 2067, 2714
BclI	TGATCA	1 cut(s)	1500
BcnI	CCSGG	2 cut(s)	16, 66
BcoDI	GTCTC	4 cut(s)	461, 1134, 1233, 2766
BfaI	CTAG	9 cut(s)	330, 543, 690, 770, 1056, 1148, 1253, 1635, 2097
BfmI	CTRYAG	3 cut(s)	506, 1746, 1950
BfuAI	ACCTGC	3 cut(s)	102, 946, 2014
BisI	GCNGC	7 cut(s)	406, 506, 684, 1238, 1320, 2563, 2828
BlsI	GCNGC	7 cut(s)	407, 507, 685, 1239, 1321, 2564, 2829
BmcAI	AGTACT	1 cut(s)	2537
Bme1390I	CCNGG	6 cut(s)	16, 66, 705, 1446, 2067, 2714
Bme18I	GGWCC	4 cut(s)	518, 1621, 1908, 2127
BmeT110I	CYCGRG	2 cut(s)	159, 589
BmgBI	CACGTC	1 cut(s)	910
BmgT120I	GGNCC	5 cut(s)	518, 865, 1621, 1908, 2127
BmiI	GGNNCC	8 cut(s)	107, 519, 553, 702, 1061, 1395, 1831, 2836
BmrFI	CCNGG	6 cut(s)	16, 66, 705, 1446, 2067, 2714
BmrI	ACTGGG	1 cut(s)	821
BmuI	ACTGGG	1 cut(s)	821
BoxI	GACNNNNGTC	1 cut(s)	712
BpiI	GAAGAC	2 cut(s)	59, 422
BplI	GAGNNNNNCTC	2 cut(s)	2304, 2336
BpmI	CTGGAG	1 cut(s)	603
Bpu10I	CCTNAGC	2 cut(s)	1472, 2116
Bpu14I	TTCGAA	1 cut(s)	212
BpuMI	CCSGG	2 cut(s)	16, 66
Bsa29I	ATCGAT	1 cut(s)	2286
BsaBI	GATNNNNATC	1 cut(s)	2052
BsaHI	GRCGYC	1 cut(s)	26
BsaI	GGTCTC	1 cut(s)	1233
BsaJI	CCNNGG	9 cut(s)	241, 555, 1020, 1388, 1401, 2065, 2066, 2712, 2713
BsaWI	WCCGGW	2 cut(s)	1362, 2570
BsaXI	ACNNNNNCTCC	2 cut(s)	1648, 1678
Bse118I	RCCGGY	3 cut(s)	205, 1649, 2556
Bse1I	ACTGG	6 cut(s)	107, 620, 816, 1591, 1741, 2233
Bse3DI	GCAATG	2 cut(s)	1802, 2165
Bse8I	GATNNNNATC	1 cut(s)	2052
BseAI	TCCGGA	1 cut(s)	2570
BseBI	CCWGG	4 cut(s)	705, 1446, 2067, 2714
BseCI	ATCGAT	1 cut(s)	2286
BseDI	CCNNGG	9 cut(s)	241, 555, 1020, 1388, 1401, 2065, 2066, 2712, 2713
BseGI	GGATG	7 cut(s)	781, 947, 1007, 1313, 1503, 1898, 2113
BseJI	GATNNNNATC	1 cut(s)	2052
BseMI	GCAATG	2 cut(s)	1802, 2165
BseMII	CTCAG	5 cut(s)	512, 1244, 1361, 1841, 2130
BseNI	ACTGG	6 cut(s)	107, 620, 816, 1591, 1741, 2233
BseRI	GAGGAG	1 cut(s)	177
BseSI	GKGCMC	2 cut(s)	1384, 1834
BseXI	GCAGC	7 cut(s)	417, 492, 670, 1249, 1306, 2549, 2814
BseYI	CCCAGC	1 cut(s)	2830
BsgI	GTGCAG	2 cut(s)	867, 2363
Bsh1236I	CGCG	3 cut(s)	366, 586, 661
Bsh1285I	CGRYCG	1 cut(s)	1654
BshFI	GGCC	7 cut(s)	64, 496, 867, 1000, 1515, 1985, 2556
BshNI	GGYRCC	2 cut(s)	1393, 1829
BshVI	ATCGAT	1 cut(s)	2286
BsiEI	CGRYCG	1 cut(s)	1654
BsiHKAI	GWGCWC	4 cut(s)	297, 316, 739, 1612
BsiHKCI	CYCGRG	2 cut(s)	159, 589
BsiSI	CCGG	7 cut(s)	15, 65, 206, 1363, 1650, 2557, 2571
BslFI	GGGAC	6 cut(s)	31, 354, 531, 1351, 1771, 2504
BsmAI	GTCTC	4 cut(s)	461, 1134, 1233, 2766
BsmFI	GGGAC	6 cut(s)	31, 354, 531, 1351, 1771, 2504
BsmI	GAATGC	2 cut(s)	1758, 2353
BsnI	GGCC	7 cut(s)	64, 496, 867, 1000, 1515, 1985, 2556
Bso31I	GGTCTC	1 cut(s)	1233
BsoBI	CYCGRG	2 cut(s)	159, 589
Bsp119I	TTCGAA	1 cut(s)	212
Bsp1286I	GDGCHC	7 cut(s)	297, 316, 739, 1384, 1612, 1834, 2066
Bsp13I	TCCGGA	1 cut(s)	2570
Bsp143I	GATC	8 cut(s)	1277, 1500, 1954, 2027, 2161, 2431, 2751, 2805
BspACI	CCGC	4 cut(s)	109, 357, 408, 1317
BspANI	GGCC	7 cut(s)	64, 496, 867, 1000, 1515, 1985, 2556
BspCNI	CTCAG	5 cut(s)	511, 1243, 1362, 1842, 2129
BspDI	ATCGAT	1 cut(s)	2286
BspEI	TCCGGA	1 cut(s)	2570
BspFNI	CGCG	3 cut(s)	366, 586, 661
BspHI	TCATGA	2 cut(s)	2044, 2179
BspLI	GGNNCC	8 cut(s)	107, 519, 553, 702, 1061, 1395, 1831, 2836
BspMAI	CTGCAG	2 cut(s)	510, 1954
BspMI	ACCTGC	3 cut(s)	102, 946, 2014
BspPI	GGATC	2 cut(s)	1272, 2156
BspQI	GCTCTTC	4 cut(s)	101, 137, 982, 1300
BspT104I	TTCGAA	1 cut(s)	212
BspT107I	GGYRCC	2 cut(s)	1393, 1829
BspTNI	GGTCTC	1 cut(s)	1233
BsrDI	GCAATG	2 cut(s)	1802, 2165
BsrFI	RCCGGY	3 cut(s)	205, 1649, 2556
BsrI	ACTGG	6 cut(s)	107, 620, 816, 1591, 1741, 2233
BssAI	RCCGGY	3 cut(s)	205, 1649, 2556
BssECI	CCNNGG	9 cut(s)	241, 555, 1020, 1388, 1401, 2065, 2066, 2712, 2713
BssMI	GATC	8 cut(s)	1277, 1500, 1954, 2027, 2161, 2431, 2751, 2805
BssNI	GRCGYC	1 cut(s)	26
BssSI	CACGAG	1 cut(s)	2010
BssT1I	CCWWGG	2 cut(s)	1020, 1401
Bst2BI	CACGAG	1 cut(s)	2010
Bst2UI	CCWGG	4 cut(s)	705, 1446, 2067, 2714
Bst4CI	ACNGT	2 cut(s)	242, 522
Bst6I	CTCTTC	7 cut(s)	101, 137, 524, 620, 982, 1252, 1300
BstACI	GRCGYC	1 cut(s)	26
BstAPI	GCANNNNNTGC	4 cut(s)	307, 734, 1892, 2006
BstBI	TTCGAA	1 cut(s)	212
BstC8I	GCNNGC	7 cut(s)	312, 357, 612, 1184, 1860, 2318, 2825
BstDEI	CTNAG	9 cut(s)	498, 964, 1230, 1370, 1416, 1472, 1850, 2116, 2539
BstDSI	CCRYGG	1 cut(s)	241
BstF5I	GGATG	7 cut(s)	781, 947, 1007, 1313, 1503, 1898, 2113
BstFNI	CGCG	3 cut(s)	366, 586, 661
BstHHI	GCGC	2 cut(s)	588, 663
BstKTI	GATC	8 cut(s)	1280, 1503, 1957, 2030, 2164, 2434, 2754, 2808
BstMAI	GTCTC	4 cut(s)	461, 1134, 1233, 2766
BstMBI	GATC	8 cut(s)	1277, 1500, 1954, 2027, 2161, 2431, 2751, 2805
BstMCI	CGRYCG	1 cut(s)	1654
BstNI	CCWGG	4 cut(s)	705, 1446, 2067, 2714
BstNSI	RCATGY	1 cut(s)	834
BstPAI	GACNNNNGTC	1 cut(s)	712
BstSCI	CCNGG	6 cut(s)	14, 64, 703, 1444, 2065, 2712
BstSFI	CTRYAG	3 cut(s)	506, 1746, 1950
BstSLI	GKGCMC	2 cut(s)	1384, 1834
BstUI	CGCG	3 cut(s)	366, 586, 661
BstV1I	GCAGC	7 cut(s)	417, 492, 670, 1249, 1306, 2549, 2814
BstV2I	GAAGAC	2 cut(s)	59, 422
BstX2I	RGATCY	1 cut(s)	1277
BstXI	CCANNNNNNTGG	1 cut(s)	2212
BstYI	RGATCY	1 cut(s)	1277
Bsu15I	ATCGAT	1 cut(s)	2286
BsuRI	GGCC	7 cut(s)	64, 496, 867, 1000, 1515, 1985, 2556
BsuTUI	ATCGAT	1 cut(s)	2286
BtgI	CCRYGG	1 cut(s)	241
BtrI	CACGTC	1 cut(s)	910
BtsCI	GGATG	7 cut(s)	781, 947, 1007, 1313, 1503, 1898, 2113
BtsI	GCAGTG	3 cut(s)	543, 1911, 2239
BtsIMutI	CAGTG	7 cut(s)	543, 627, 809, 1689, 1911, 2217, 2239
BveI	ACCTGC	3 cut(s)	102, 946, 2014
Cac8I	GCNNGC	7 cut(s)	312, 357, 612, 1184, 1860, 2318, 2825
CaiI	CAGNNNCTG	2 cut(s)	505, 2830
CciI	TCATGA	2 cut(s)	2044, 2179
CfoI	GCGC	2 cut(s)	588, 663
Cfr10I	RCCGGY	3 cut(s)	205, 1649, 2556
Cfr13I	GGNCC	5 cut(s)	518, 865, 1621, 1908, 2127
ClaI	ATCGAT	1 cut(s)	2286
CseI	GACGC	3 cut(s)	15, 64, 64
Csp6I	GTAC	2 cut(s)	1761, 2536
CspCI	CAANNNNNGTGG	4 cut(s)	868, 903, 1492, 1527
CviQI	GTAC	2 cut(s)	1761, 2536
DdeI	CTNAG	9 cut(s)	498, 964, 1230, 1370, 1416, 1472, 1850, 2116, 2539
DpnI	GATC	8 cut(s)	1279, 1502, 1956, 2029, 2163, 2433, 2753, 2807
DpnII	GATC	8 cut(s)	1277, 1500, 1954, 2027, 2161, 2431, 2751, 2805
DrdI	GACNNNNNNGTC	1 cut(s)	25
DseDI	GACNNNNNNGTC	1 cut(s)	25
EaeI	YGGCCR	3 cut(s)	1513, 1983, 2554
Eam1104I	CTCTTC	7 cut(s)	101, 137, 524, 620, 982, 1252, 1300
EarI	CTCTTC	7 cut(s)	101, 137, 524, 620, 982, 1252, 1300
Ecl136II	GAGCTC	1 cut(s)	314
Eco130I	CCWWGG	2 cut(s)	1020, 1401
Eco147I	AGGCCT	1 cut(s)	496
Eco24I	GRGCYC	2 cut(s)	316, 2066
Eco31I	GGTCTC	1 cut(s)	1233
Eco47I	GGWCC	4 cut(s)	518, 1621, 1908, 2127
Eco53kI	GAGCTC	1 cut(s)	314
Eco57I	CTGAAG	2 cut(s)	695, 2193
Eco88I	CYCGRG	2 cut(s)	159, 589
EcoICRI	GAGCTC	1 cut(s)	314
EcoRI	GAATTC	2 cut(s)	652, 2510
EcoRII	CCWGG	4 cut(s)	703, 1444, 2065, 2712
EcoT14I	CCWWGG	2 cut(s)	1020, 1401
EcoT38I	GRGCYC	2 cut(s)	316, 2066
ErhI	CCWWGG	2 cut(s)	1020, 1401
FalI	AAGNNNNNCTT	2 cut(s)	116, 148
FaqI	GGGAC	6 cut(s)	31, 354, 531, 1351, 1771, 2504
FauI	CCCGC	1 cut(s)	364
FbaI	TGATCA	1 cut(s)	1500
FblI	GTMKAC	3 cut(s)	716, 2133, 2196
Fnu4HI	GCNGC	7 cut(s)	406, 506, 684, 1238, 1320, 2563, 2828
FokI	GGATG	7 cut(s)	788, 934, 994, 1300, 1510, 1885, 2120
FriOI	GRGCYC	2 cut(s)	316, 2066
Fsp4HI	GCNGC	7 cut(s)	406, 506, 684, 1238, 1320, 2563, 2828
FspBI	CTAG	9 cut(s)	330, 543, 690, 770, 1056, 1148, 1253, 1635, 2097
GlaI	GCGC	2 cut(s)	587, 662
GluI	GCNGC	7 cut(s)	406, 506, 684, 1238, 1320, 2563, 2828
GsaI	CCCAGC	1 cut(s)	2834
GsuI	CTGGAG	1 cut(s)	603
HaeIII	GGCC	7 cut(s)	64, 496, 867, 1000, 1515, 1985, 2556
HapII	CCGG	7 cut(s)	15, 65, 206, 1363, 1650, 2557, 2571
HgaI	GACGC	3 cut(s)	15, 64, 64
HhaI	GCGC	2 cut(s)	588, 663
Hin1I	GRCGYC	1 cut(s)	26
Hin6I	GCGC	2 cut(s)	586, 661
HinP1I	GCGC	2 cut(s)	586, 661
HincII	GTYRAC	2 cut(s)	853, 1584
HindII	GTYRAC	2 cut(s)	853, 1584
HindIII	AAGCTT	5 cut(s)	215, 381, 608, 2082, 2742
HpaII	CCGG	7 cut(s)	15, 65, 206, 1363, 1650, 2557, 2571
HphI	GGTGA	6 cut(s)	593, 1118, 1417, 1995, 2314, 2519
Hpy188I	TCNGA	8 cut(s)	501, 1233, 1371, 1656, 2158, 2579, 2649, 2761
Hpy99I	CGWCG	3 cut(s)	31, 80, 1976
HpyAV	CCTTC	5 cut(s)	1115, 1136, 1655, 1844, 2396
HpyCH4III	ACNGT	2 cut(s)	242, 522
HpyCH4IV	ACGT	2 cut(s)	751, 909
HpyF3I	CTNAG	9 cut(s)	498, 964, 1230, 1370, 1416, 1472, 1850, 2116, 2539
HpySE526I	ACGT	2 cut(s)	751, 909
Hsp92I	GRCGYC	1 cut(s)	26
HspAI	GCGC	2 cut(s)	586, 661
Kpn2I	TCCGGA	1 cut(s)	2570
Ksp22I	TGATCA	1 cut(s)	1500
Kzo9I	GATC	8 cut(s)	1277, 1500, 1954, 2027, 2161, 2431, 2751, 2805
LguI	GCTCTTC	4 cut(s)	101, 137, 982, 1300
LmnI	GCTCC	4 cut(s)	164, 319, 551, 1855
Lsp1109I	GCAGC	7 cut(s)	417, 492, 670, 1249, 1306, 2549, 2814
MaeI	CTAG	9 cut(s)	330, 543, 690, 770, 1056, 1148, 1253, 1635, 2097
MaeII	ACGT	2 cut(s)	751, 909
MaeIII	GTNAC	5 cut(s)	538, 910, 1114, 1248, 1664
MalI	GATC	8 cut(s)	1279, 1502, 1956, 2029, 2163, 2433, 2753, 2807
MboI	GATC	8 cut(s)	1277, 1500, 1954, 2027, 2161, 2431, 2751, 2805
MfeI	CAATTG	2 cut(s)	1774, 2171
MflI	RGATCY	1 cut(s)	1277
MhlI	GDGCHC	7 cut(s)	297, 316, 739, 1384, 1612, 1834, 2066
MlsI	TGGCCA	2 cut(s)	1515, 1985
MluNI	TGGCCA	2 cut(s)	1515, 1985
MlyI	GAGTC	4 cut(s)	2192, 2368, 2537, 2713
MmeI	TCCRAC	2 cut(s)	1634, 2014
Mox20I	TGGCCA	2 cut(s)	1515, 1985
MroI	TCCGGA	1 cut(s)	2570
MroXI	GAANNNNTTC	2 cut(s)	131, 1266
MscI	TGGCCA	2 cut(s)	1515, 1985
MseI	TTAA	4 cut(s)	570, 1713, 2733, 2793
MslI	CAYNNNNRTG	5 cut(s)	300, 1916, 2210, 2331, 2456
Msp20I	TGGCCA	2 cut(s)	1515, 1985
MspA1I	CMGCKG	3 cut(s)	408, 1319, 2827
MspI	CCGG	7 cut(s)	15, 65, 206, 1363, 1650, 2557, 2571
MspR9I	CCNGG	6 cut(s)	16, 66, 705, 1446, 2067, 2714
MunI	CAATTG	2 cut(s)	1774, 2171
Mva1269I	GAATGC	2 cut(s)	1758, 2353
MvaI	CCWGG	4 cut(s)	705, 1446, 2067, 2714
MvnI	CGCG	3 cut(s)	366, 586, 661
NciI	CCSGG	2 cut(s)	16, 66
NdeII	GATC	8 cut(s)	1277, 1500, 1954, 2027, 2161, 2431, 2751, 2805
NlaIV	GGNNCC	8 cut(s)	107, 519, 553, 702, 1061, 1395, 1831, 2836
NmeAIII	GCCGAG	1 cut(s)	580
NmuCI	GTSAC	4 cut(s)	538, 910, 1114, 1248
NspI	RCATGY	1 cut(s)	834
NspV	TTCGAA	1 cut(s)	212
OliI	CACNNNNGTG	1 cut(s)	2210
PaeR7I	CTCGAG	2 cut(s)	159, 589
PagI	TCATGA	2 cut(s)	2044, 2179
PaqCI	CACCTGC	1 cut(s)	2014
PasI	CCCWGGG	2 cut(s)	2066, 2713
PceI	AGGCCT	1 cut(s)	496
PciSI	GCTCTTC	4 cut(s)	101, 137, 982, 1300
PcsI	WCGNNNNNNNCGW	2 cut(s)	35, 2814
PctI	GAATGC	2 cut(s)	1758, 2353
PdmI	GAANNNNTTC	2 cut(s)	131, 1266
PflFI	GACNNNGTC	1 cut(s)	2525
PflMI	CCANNNNNTGG	2 cut(s)	1814, 2830
PfoI	TCCNGGA	1 cut(s)	1444
PkrI	GCNGC	7 cut(s)	407, 507, 685, 1239, 1321, 2564, 2829
PleI	GAGTC	4 cut(s)	2192, 2368, 2537, 2712
PpsI	GAGTC	4 cut(s)	2192, 2368, 2537, 2712
PshAI	GACNNNNGTC	1 cut(s)	712
PsiI	TTATAA	1 cut(s)	837
Psp124BI	GAGCTC	1 cut(s)	316
Psp6I	CCWGG	4 cut(s)	703, 1444, 2065, 2712
PspFI	CCCAGC	1 cut(s)	2830
PspGI	CCWGG	4 cut(s)	703, 1444, 2065, 2712
PspN4I	GGNNCC	8 cut(s)	107, 519, 553, 702, 1061, 1395, 1831, 2836
PspPI	GGNCC	5 cut(s)	518, 865, 1621, 1908, 2127
PstI	CTGCAG	2 cut(s)	510, 1954
PstNI	CAGNNNCTG	2 cut(s)	505, 2830
PsuI	RGATCY	1 cut(s)	1277
PsyI	GACNNNGTC	1 cut(s)	2525
PvuII	CAGCTG	1 cut(s)	2827
RsaI	GTAC	2 cut(s)	1762, 2537
RsaNI	GTAC	2 cut(s)	1761, 2536
RseI	CAYNNNNRTG	5 cut(s)	300, 1916, 2210, 2331, 2456
SacI	GAGCTC	1 cut(s)	316
SapI	GCTCTTC	4 cut(s)	101, 137, 982, 1300
SaqAI	TTAA	4 cut(s)	570, 1713, 2733, 2793
SatI	GCNGC	7 cut(s)	406, 506, 684, 1238, 1320, 2563, 2828
Sau3AI	GATC	8 cut(s)	1277, 1500, 1954, 2027, 2161, 2431, 2751, 2805
Sau96I	GGNCC	5 cut(s)	518, 865, 1621, 1908, 2127
ScaI	AGTACT	1 cut(s)	2537
SchI	GAGTC	4 cut(s)	2192, 2368, 2537, 2713
ScrFI	CCNGG	6 cut(s)	16, 66, 705, 1446, 2067, 2714
SduI	GDGCHC	7 cut(s)	297, 316, 739, 1384, 1612, 1834, 2066
SfcI	CTRYAG	3 cut(s)	506, 1746, 1950
Sfr274I	CTCGAG	2 cut(s)	159, 589
SfuI	TTCGAA	1 cut(s)	212
SinI	GGWCC	4 cut(s)	518, 1621, 1908, 2127
SlaI	CTCGAG	2 cut(s)	159, 589
SmiMI	CAYNNNNRTG	5 cut(s)	300, 1916, 2210, 2331, 2456
SmlI	CTYRAG	2 cut(s)	159, 589
SmoI	CTYRAG	2 cut(s)	159, 589
SseBI	AGGCCT	1 cut(s)	496
SsiI	CCGC	4 cut(s)	109, 357, 408, 1317
SspMI	CTAG	9 cut(s)	330, 543, 690, 770, 1056, 1148, 1253, 1635, 2097
SstI	GAGCTC	1 cut(s)	316
StuI	AGGCCT	1 cut(s)	496
StyD4I	CCNGG	6 cut(s)	14, 64, 703, 1444, 2065, 2712
StyI	CCWWGG	2 cut(s)	1020, 1401
TaaI	ACNGT	2 cut(s)	242, 522
TaiI	ACGT	2 cut(s)	754, 912
TaqI	TCGA	8 cut(s)	99, 160, 212, 590, 1243, 2267, 2286, 2808
TatI	WGTACW	1 cut(s)	2535
Tru1I	TTAA	4 cut(s)	570, 1713, 2733, 2793
Tru9I	TTAA	4 cut(s)	570, 1713, 2733, 2793
TscAI	CASTG	7 cut(s)	543, 627, 816, 1696, 1918, 2217, 2239
TseFI	GTSAC	4 cut(s)	538, 910, 1114, 1248
TseI	GCWGC	7 cut(s)	405, 505, 683, 1237, 1319, 2562, 2827
Tsp45I	GTSAC	4 cut(s)	538, 910, 1114, 1248
TspGWI	ACGGA	6 cut(s)	1501, 1989, 2119, 2162, 2672, 2784
TspRI	CASTG	7 cut(s)	543, 627, 816, 1696, 1918, 2217, 2239
Tth111I	GACNNNGTC	1 cut(s)	2525
Van91I	CCANNNNNTGG	2 cut(s)	1814, 2830
VpaK11BI	GGWCC	4 cut(s)	518, 1621, 1908, 2127
XapI	RAATTY	5 cut(s)	460, 652, 693, 2465, 2510
XceI	RCATGY	1 cut(s)	834
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1018
XhoI	CTCGAG	2 cut(s)	159, 589
XmiI	GTMKAC	3 cut(s)	716, 2133, 2196
XmnI	GAANNNNTTC	2 cut(s)	131, 1266
XspI	CTAG	9 cut(s)	330, 543, 690, 770, 1056, 1148, 1253, 1635, 2097
ZrmI	AGTACT	1 cut(s)	2537

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.