DUF761-associated sequence motif
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G67040 AT1G67040 |
| malus_domestica | MD09G1253500.v1.1 MD09G1253600.v1.1 MD17G1245400.v1.1 |
| prunus_persica | Prupe.3G143500_v2.0.a1 |
| pyrus_communis | pycom09g16950 pycom17g24780 pycom17g24790 |
| rosa_chinensis | RchiOBHm_Chr2g0126071 |
| rosa_laevigata | RLG00000018886 |
| rosa_multiflora | Rmu_sc0001506.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00117460 |
| rosa_rugosa | Rorug02G0260600 Rorug02G0260700 |
| rosa_samantha | Rh2AG318100 Rh2BG326500 Rh2DG344500 Rh2DG344600 |
| rosa_wichuraiana | Rw2G025760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1628 |
| Acc16I | TGCGCA | 1 cut(s) | 1002 |
| Acc36I | ACCTGC | 2 cut(s) | 105, 1325 |
| AccB1I | GGYRCC | 1 cut(s) | 1327 |
| AccI | GTMKAC | 2 cut(s) | 403, 713 |
| AciI | CCGC | 3 cut(s) | 350, 764, 2186 |
| AclWI | GGATC | 6 cut(s) | 692, 705, 1429, 1836, 2013, 2665 |
| AcsI | RAATTY | 2 cut(s) | 259, 1206 |
| AcuI | CTGAAG | 2 cut(s) | 272, 482 |
| AcyI | GRCGYC | 1 cut(s) | 29 |
| AfaI | GTAC | 4 cut(s) | 13, 1315, 1696, 2462 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 213, 1337, 2106 |
| AflIII | ACRYGT | 2 cut(s) | 877, 916 |
| AhlI | ACTAGT | 1 cut(s) | 2354 |
| AjnI | CCWGG | 6 cut(s) | 67, 307, 774, 1957, 2456, 2566 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2241, 2273 |
| Alw21I | GWGCWC | 3 cut(s) | 307, 736, 1516 |
| Alw26I | GTCTC | 3 cut(s) | 1116, 1769, 2667 |
| Alw44I | GTGCAC | 1 cut(s) | 1512 |
| AlwI | GGATC | 6 cut(s) | 692, 705, 1429, 1836, 2013, 2665 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1055, 1526, 1625, 2096 |
| Ama87I | CYCGRG | 1 cut(s) | 701 |
| AoxI | GGCC | 5 cut(s) | 65, 351, 485, 980, 1864 |
| ApaLI | GTGCAC | 1 cut(s) | 1512 |
| ApeKI | GCWGC | 5 cut(s) | 680, 706, 1177, 1259, 2724 |
| ApoI | RAATTY | 2 cut(s) | 259, 1206 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1206, 2575 |
| AspLEI | GCGC | 2 cut(s) | 1003, 2016 |
| AspS9I | GGNCC | 2 cut(s) | 352, 1272 |
| AsuC2I | CCSGG | 3 cut(s) | 702, 703, 2107 |
| AsuHPI | GGTGA | 2 cut(s) | 777, 1955 |
| AsuNHI | GCTAGC | 1 cut(s) | 1792 |
| AvaI | CYCGRG | 1 cut(s) | 701 |
| AvaII | GGWCC | 1 cut(s) | 1272 |
| BaeGI | GKGCMC | 1 cut(s) | 1516 |
| BamHI | GGATCC | 1 cut(s) | 697 |
| BanI | GGYRCC | 1 cut(s) | 1327 |
| BanII | GRGCYC | 2 cut(s) | 307, 1958 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1459, 1491 |
| BauI | CACGAG | 1 cut(s) | 162 |
| BbsI | GAAGAC | 2 cut(s) | 809, 2126 |
| Bbv12I | GWGCWC | 3 cut(s) | 307, 736, 1516 |
| BbvI | GCAGC | 5 cut(s) | 667, 693, 1189, 1246, 2736 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 281, 315 |
| BciT130I | CCWGG | 6 cut(s) | 69, 309, 776, 1959, 2458, 2568 |
| BclI | TGATCA | 3 cut(s) | 39, 1945, 2053 |
| BcnI | CCSGG | 3 cut(s) | 702, 703, 2107 |
| BcoDI | GTCTC | 3 cut(s) | 1116, 1769, 2667 |
| BcuI | ACTAGT | 1 cut(s) | 2354 |
| BfmI | CTRYAG | 1 cut(s) | 707 |
| BfuAI | ACCTGC | 2 cut(s) | 105, 1325 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1256 |
| BglII | AGATCT | 2 cut(s) | 633, 1719 |
| BisI | GCNGC | 6 cut(s) | 351, 681, 707, 1178, 1260, 2725 |
| BlsI | GCNGC | 6 cut(s) | 352, 682, 708, 1179, 1261, 2726 |
| Bme1390I | CCNGG | 9 cut(s) | 69, 309, 702, 703, 776, 1959, 2107, 2458, 2568 |
| Bme18I | GGWCC | 1 cut(s) | 1272 |
| BmeT110I | CYCGRG | 1 cut(s) | 701 |
| BmgT120I | GGNCC | 2 cut(s) | 352, 1272 |
| BmiI | GGNNCC | 6 cut(s) | 248, 699, 1107, 1273, 1329, 2734 |
| BmrFI | CCNGG | 9 cut(s) | 69, 309, 702, 703, 776, 1959, 2107, 2458, 2568 |
| BmsI | GCATC | 8 cut(s) | 192, 598, 757, 1164, 1744, 2068, 2187, 2254 |
| BmtI | GCTAGC | 1 cut(s) | 1796 |
| BpiI | GAAGAC | 2 cut(s) | 809, 2126 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1867, 1899 |
| BpmI | CTGGAG | 2 cut(s) | 291, 600 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2008 |
| BpuEI | CTTGAG | 2 cut(s) | 360, 744 |
| BpuMI | CCSGG | 3 cut(s) | 702, 703, 2107 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1944, 2082 |
| BsaHI | GRCGYC | 1 cut(s) | 29 |
| BsaI | GGTCTC | 1 cut(s) | 1769 |
| BsaJI | CCNNGG | 6 cut(s) | 701, 774, 1078, 1957, 1958, 2106 |
| BsaWI | WCCGGW | 1 cut(s) | 641 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 213, 1337, 2106 |
| Bse1I | ACTGG | 7 cut(s) | 617, 823, 1402, 1531, 1675, 2124, 2409 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1944, 2082 |
| BseBI | CCWGG | 6 cut(s) | 69, 309, 776, 1959, 2458, 2568 |
| BseDI | CCNNGG | 6 cut(s) | 701, 774, 1078, 1957, 1958, 2106 |
| BseJI | GATNNNNATC | 2 cut(s) | 1944, 2082 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 213, 1337, 2106 |
| BseMII | CTCAG | 5 cut(s) | 537, 1517, 1898, 1943, 2022 |
| BseNI | ACTGG | 7 cut(s) | 617, 823, 1402, 1531, 1675, 2124, 2409 |
| BseRI | GAGGAG | 2 cut(s) | 628, 1441 |
| BseSI | GKGCMC | 1 cut(s) | 1516 |
| BseXI | GCAGC | 5 cut(s) | 667, 693, 1189, 1246, 2736 |
| BshFI | GGCC | 5 cut(s) | 67, 353, 487, 982, 1866 |
| BshNI | GGYRCC | 1 cut(s) | 1327 |
| BsiHKAI | GWGCWC | 3 cut(s) | 307, 736, 1516 |
| BsiHKCI | CYCGRG | 1 cut(s) | 701 |
| BsiSI | CCGG | 3 cut(s) | 642, 702, 2106 |
| BslFI | GGGAC | 4 cut(s) | 522, 1285, 1537, 2295 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 213, 1337, 2106 |
| BsmAI | GTCTC | 3 cut(s) | 1116, 1769, 2667 |
| BsmBI | CGTCTC | 1 cut(s) | 1116 |
| BsmFI | GGGAC | 4 cut(s) | 522, 1285, 1537, 2295 |
| BsnI | GGCC | 5 cut(s) | 67, 353, 487, 982, 1866 |
| Bso31I | GGTCTC | 1 cut(s) | 1769 |
| BsoBI | CYCGRG | 1 cut(s) | 701 |
| Bsp1286I | GDGCHC | 4 cut(s) | 307, 736, 1516, 1958 |
| Bsp19I | CCATGG | 1 cut(s) | 1078 |
| BspACI | CCGC | 3 cut(s) | 350, 764, 2186 |
| BspANI | GGCC | 5 cut(s) | 67, 353, 487, 982, 1866 |
| BspCNI | CTCAG | 5 cut(s) | 538, 1516, 1897, 1944, 2021 |
| BspHI | TCATGA | 1 cut(s) | 2304 |
| BspLI | GGNNCC | 6 cut(s) | 248, 699, 1107, 1273, 1329, 2734 |
| BspMAI | CTGCAG | 1 cut(s) | 711 |
| BspMI | ACCTGC | 2 cut(s) | 105, 1325 |
| BspOI | GCTAGC | 1 cut(s) | 1796 |
| BspPI | GGATC | 6 cut(s) | 692, 705, 1429, 1836, 2013, 2665 |
| BspQI | GCTCTTC | 3 cut(s) | 104, 140, 1240 |
| BspT107I | GGYRCC | 1 cut(s) | 1327 |
| BspTNI | GGTCTC | 1 cut(s) | 1769 |
| BsrI | ACTGG | 7 cut(s) | 617, 823, 1402, 1531, 1675, 2124, 2409 |
| BssECI | CCNNGG | 6 cut(s) | 701, 774, 1078, 1957, 1958, 2106 |
| BssNI | GRCGYC | 1 cut(s) | 29 |
| BssSI | CACGAG | 1 cut(s) | 162 |
| BssT1I | CCWWGG | 1 cut(s) | 1078 |
| Bst2BI | CACGAG | 1 cut(s) | 162 |
| Bst2UI | CCWGG | 6 cut(s) | 69, 309, 776, 1959, 2458, 2568 |
| Bst4CI | ACNGT | 2 cut(s) | 2426, 2465 |
| Bst6I | CTCTTC | 6 cut(s) | 104, 140, 233, 1240, 1990, 2532 |
| BstACI | GRCGYC | 1 cut(s) | 29 |
| BstC8I | GCNNGC | 6 cut(s) | 348, 609, 1794, 2064, 2496, 2564 |
| BstDEI | CTNAG | 7 cut(s) | 546, 798, 1304, 1503, 1884, 1952, 2008 |
| BstDSI | CCRYGG | 1 cut(s) | 1078 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1335 |
| BstHHI | GCGC | 2 cut(s) | 1003, 2016 |
| BstMAI | GTCTC | 3 cut(s) | 1116, 1769, 2667 |
| BstNI | CCWGG | 6 cut(s) | 69, 309, 776, 1959, 2458, 2568 |
| BstNSI | RCATGY | 4 cut(s) | 346, 881, 920, 2229 |
| BstSCI | CCNGG | 9 cut(s) | 67, 307, 700, 701, 774, 1957, 2105, 2456, 2566 |
| BstSFI | CTRYAG | 1 cut(s) | 707 |
| BstSLI | GKGCMC | 1 cut(s) | 1516 |
| BstV1I | GCAGC | 5 cut(s) | 667, 693, 1189, 1246, 2736 |
| BstV2I | GAAGAC | 2 cut(s) | 809, 2126 |
| BstX2I | RGATCY | 6 cut(s) | 633, 697, 1719, 1841, 2018, 2657 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1445 |
| BstYI | RGATCY | 6 cut(s) | 633, 697, 1719, 1841, 2018, 2657 |
| BsuRI | GGCC | 5 cut(s) | 67, 353, 487, 982, 1866 |
| BtgI | CCRYGG | 1 cut(s) | 1078 |
| BtsI | GCAGTG | 3 cut(s) | 534, 1845, 2100 |
| BtsIMutI | CAGTG | 5 cut(s) | 534, 1450, 1623, 1845, 2100 |
| BveI | ACCTGC | 2 cut(s) | 105, 1325 |
| Cac8I | GCNNGC | 6 cut(s) | 348, 609, 1794, 2064, 2496, 2564 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1055, 1526, 1625, 2096 |
| CciI | TCATGA | 1 cut(s) | 2304 |
| CfoI | GCGC | 2 cut(s) | 1003, 2016 |
| Cfr13I | GGNCC | 2 cut(s) | 352, 1272 |
| Cfr9I | CCCGGG | 1 cut(s) | 701 |
| CseI | GACGC | 2 cut(s) | 18, 67 |
| Csp6I | GTAC | 4 cut(s) | 12, 1314, 1695, 2461 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 844, 879 |
| CviQI | GTAC | 4 cut(s) | 12, 1314, 1695, 2461 |
| DdeI | CTNAG | 7 cut(s) | 546, 798, 1304, 1503, 1884, 1952, 2008 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1628 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1628 |
| Eam1104I | CTCTTC | 6 cut(s) | 104, 140, 233, 1240, 1990, 2532 |
| EarI | CTCTTC | 6 cut(s) | 104, 140, 233, 1240, 1990, 2532 |
| Ecl136II | GAGCTC | 1 cut(s) | 305 |
| Eco130I | CCWWGG | 1 cut(s) | 1078 |
| Eco147I | AGGCCT | 2 cut(s) | 67, 487 |
| Eco24I | GRGCYC | 2 cut(s) | 307, 1958 |
| Eco31I | GGTCTC | 1 cut(s) | 1769 |
| Eco32I | GATATC | 2 cut(s) | 1169, 2386 |
| Eco47I | GGWCC | 1 cut(s) | 1272 |
| Eco53kI | GAGCTC | 1 cut(s) | 305 |
| Eco57I | CTGAAG | 2 cut(s) | 272, 482 |
| Eco88I | CYCGRG | 1 cut(s) | 701 |
| EcoICRI | GAGCTC | 1 cut(s) | 305 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1335 |
| EcoRI | GAATTC | 1 cut(s) | 1206 |
| EcoRII | CCWGG | 6 cut(s) | 67, 307, 774, 1957, 2456, 2566 |
| EcoRV | GATATC | 2 cut(s) | 1169, 2386 |
| EcoT14I | CCWWGG | 1 cut(s) | 1078 |
| EcoT22I | ATGCAT | 2 cut(s) | 2227, 2277 |
| EcoT38I | GRGCYC | 2 cut(s) | 307, 1958 |
| ErhI | CCWWGG | 1 cut(s) | 1078 |
| Esp3I | CGTCTC | 1 cut(s) | 1116 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1111, 1143 |
| FaqI | GGGAC | 4 cut(s) | 522, 1285, 1537, 2295 |
| FbaI | TGATCA | 3 cut(s) | 39, 1945, 2053 |
| FblI | GTMKAC | 2 cut(s) | 403, 713 |
| Fnu4HI | GCNGC | 6 cut(s) | 351, 681, 707, 1178, 1260, 2725 |
| FriOI | GRGCYC | 2 cut(s) | 307, 1958 |
| Fsp4HI | GCNGC | 6 cut(s) | 351, 681, 707, 1178, 1260, 2725 |
| FspI | TGCGCA | 1 cut(s) | 1002 |
| GlaI | GCGC | 2 cut(s) | 1002, 2015 |
| GluI | GCNGC | 6 cut(s) | 351, 681, 707, 1178, 1260, 2725 |
| GsuI | CTGGAG | 2 cut(s) | 291, 600 |
| HaeIII | GGCC | 5 cut(s) | 67, 353, 487, 982, 1866 |
| HapII | CCGG | 3 cut(s) | 642, 702, 2106 |
| HgaI | GACGC | 2 cut(s) | 18, 67 |
| HhaI | GCGC | 2 cut(s) | 1003, 2016 |
| Hin1I | GRCGYC | 1 cut(s) | 29 |
| Hin6I | GCGC | 2 cut(s) | 1001, 2014 |
| HinP1I | GCGC | 2 cut(s) | 1001, 2014 |
| HincII | GTYRAC | 4 cut(s) | 404, 1148, 2152, 2402 |
| HindII | GTYRAC | 4 cut(s) | 404, 1148, 2152, 2402 |
| HindIII | AAGCTT | 4 cut(s) | 494, 605, 1125, 1974 |
| HpaII | CCGG | 3 cut(s) | 642, 702, 2106 |
| HphI | GGTGA | 2 cut(s) | 777, 1955 |
| Hpy166II | GTNNAC | 7 cut(s) | 404, 714, 1148, 1448, 1514, 2152, 2402 |
| Hpy8I | GTNNAC | 7 cut(s) | 404, 714, 1148, 1448, 1514, 2152, 2402 |
| Hpy99I | CGWCG | 3 cut(s) | 34, 61, 405 |
| HpyAV | CCTTC | 6 cut(s) | 945, 1192, 1378, 2032, 2202, 2288 |
| HpyCH4III | ACNGT | 2 cut(s) | 2426, 2465 |
| HpyCH4IV | ACGT | 1 cut(s) | 792 |
| HpyF3I | CTNAG | 7 cut(s) | 546, 798, 1304, 1503, 1884, 1952, 2008 |
| HpySE526I | ACGT | 1 cut(s) | 792 |
| Hsp92I | GRCGYC | 1 cut(s) | 29 |
| HspAI | GCGC | 2 cut(s) | 1001, 2014 |
| Ksp22I | TGATCA | 3 cut(s) | 39, 1945, 2053 |
| LguI | GCTCTTC | 3 cut(s) | 104, 140, 1240 |
| LmnI | GCTCC | 6 cut(s) | 295, 310, 542, 1111, 1789, 2738 |
| Lsp1109I | GCAGC | 5 cut(s) | 667, 693, 1189, 1246, 2736 |
| LweI | GCATC | 8 cut(s) | 192, 598, 757, 1164, 1744, 2068, 2187, 2254 |
| MaeII | ACGT | 1 cut(s) | 792 |
| MaeIII | GTNAC | 8 cut(s) | 379, 529, 549, 1188, 1453, 1471, 1598, 2465 |
| MfeI | CAATTG | 1 cut(s) | 1136 |
| MflI | RGATCY | 6 cut(s) | 633, 697, 1719, 1841, 2018, 2657 |
| MhlI | GDGCHC | 4 cut(s) | 307, 736, 1516, 1958 |
| MlyI | GAGTC | 6 cut(s) | 504, 557, 2212, 2317, 2438, 2614 |
| Mph1103I | ATGCAT | 2 cut(s) | 2227, 2277 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1206, 2575 |
| MseI | TTAA | 9 cut(s) | 890, 1092, 1406, 1550, 1647, 1895, 2240, 2501, 2547 |
| MslI | CAYNNNNRTG | 4 cut(s) | 390, 1443, 1850, 2226 |
| MspI | CCGG | 3 cut(s) | 642, 702, 2106 |
| MspR9I | CCNGG | 9 cut(s) | 69, 309, 702, 703, 776, 1959, 2107, 2458, 2568 |
| MunI | CAATTG | 1 cut(s) | 1136 |
| MvaI | CCWGG | 6 cut(s) | 69, 309, 776, 1959, 2458, 2568 |
| NciI | CCSGG | 3 cut(s) | 702, 703, 2107 |
| NcoI | CCATGG | 1 cut(s) | 1078 |
| NheI | GCTAGC | 1 cut(s) | 1792 |
| NlaIV | GGNNCC | 6 cut(s) | 248, 699, 1107, 1273, 1329, 2734 |
| NmuCI | GTSAC | 3 cut(s) | 529, 549, 1188 |
| NsbI | TGCGCA | 1 cut(s) | 1002 |
| NsiI | ATGCAT | 2 cut(s) | 2227, 2277 |
| NspI | RCATGY | 4 cut(s) | 346, 881, 920, 2229 |
| PagI | TCATGA | 1 cut(s) | 2304 |
| PasI | CCCWGGG | 1 cut(s) | 1958 |
| PceI | AGGCCT | 2 cut(s) | 67, 487 |
| PciI | ACATGT | 2 cut(s) | 877, 916 |
| PciSI | GCTCTTC | 3 cut(s) | 104, 140, 1240 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1206, 2575 |
| PfeI | GAWTC | 5 cut(s) | 479, 1013, 1346, 1391, 1855 |
| PkrI | GCNGC | 6 cut(s) | 352, 682, 708, 1179, 1261, 2726 |
| PleI | GAGTC | 6 cut(s) | 504, 556, 2212, 2316, 2438, 2613 |
| PpsI | GAGTC | 6 cut(s) | 504, 556, 2212, 2316, 2438, 2613 |
| PscI | ACATGT | 2 cut(s) | 877, 916 |
| Psp124BI | GAGCTC | 1 cut(s) | 307 |
| Psp6I | CCWGG | 6 cut(s) | 67, 307, 774, 1957, 2456, 2566 |
| PspGI | CCWGG | 6 cut(s) | 67, 307, 774, 1957, 2456, 2566 |
| PspN4I | GGNNCC | 6 cut(s) | 248, 699, 1107, 1273, 1329, 2734 |
| PspPI | GGNCC | 2 cut(s) | 352, 1272 |
| PstI | CTGCAG | 1 cut(s) | 711 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1055, 1526, 1625, 2096 |
| PsuI | RGATCY | 6 cut(s) | 633, 697, 1719, 1841, 2018, 2657 |
| RsaI | GTAC | 4 cut(s) | 13, 1315, 1696, 2462 |
| RsaNI | GTAC | 4 cut(s) | 12, 1314, 1695, 2461 |
| RseI | CAYNNNNRTG | 4 cut(s) | 390, 1443, 1850, 2226 |
| SacI | GAGCTC | 1 cut(s) | 307 |
| SalI | GTCGAC | 1 cut(s) | 402 |
| SapI | GCTCTTC | 3 cut(s) | 104, 140, 1240 |
| SaqAI | TTAA | 9 cut(s) | 890, 1092, 1406, 1550, 1647, 1895, 2240, 2501, 2547 |
| SatI | GCNGC | 6 cut(s) | 351, 681, 707, 1178, 1260, 2725 |
| Sau96I | GGNCC | 2 cut(s) | 352, 1272 |
| SchI | GAGTC | 6 cut(s) | 504, 557, 2212, 2317, 2438, 2614 |
| ScrFI | CCNGG | 9 cut(s) | 69, 309, 702, 703, 776, 1959, 2107, 2458, 2568 |
| SduI | GDGCHC | 4 cut(s) | 307, 736, 1516, 1958 |
| SfaNI | GCATC | 8 cut(s) | 192, 598, 757, 1164, 1744, 2068, 2187, 2254 |
| SfcI | CTRYAG | 1 cut(s) | 707 |
| SinI | GGWCC | 1 cut(s) | 1272 |
| SmaI | CCCGGG | 1 cut(s) | 703 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 390, 1443, 1850, 2226 |
| SmlI | CTYRAG | 2 cut(s) | 375, 759 |
| SmoI | CTYRAG | 2 cut(s) | 375, 759 |
| SpeI | ACTAGT | 1 cut(s) | 2354 |
| SseBI | AGGCCT | 2 cut(s) | 67, 487 |
| SsiI | CCGC | 3 cut(s) | 350, 764, 2186 |
| SspI | AATATT | 1 cut(s) | 943 |
| SstI | GAGCTC | 1 cut(s) | 307 |
| StuI | AGGCCT | 2 cut(s) | 67, 487 |
| StyD4I | CCNGG | 9 cut(s) | 67, 307, 700, 701, 774, 1957, 2105, 2456, 2566 |
| StyI | CCWWGG | 1 cut(s) | 1078 |
| TaaI | ACNGT | 2 cut(s) | 2426, 2465 |
| TaiI | ACGT | 1 cut(s) | 795 |
| TaqI | TCGA | 8 cut(s) | 102, 301, 403, 581, 1874, 2388, 2447, 2640 |
| TatI | WGTACW | 1 cut(s) | 11 |
| TauI | GCSGC | 1 cut(s) | 353 |
| TfiI | GAWTC | 5 cut(s) | 479, 1013, 1346, 1391, 1855 |
| Tru1I | TTAA | 9 cut(s) | 890, 1092, 1406, 1550, 1647, 1895, 2240, 2501, 2547 |
| Tru9I | TTAA | 9 cut(s) | 890, 1092, 1406, 1550, 1647, 1895, 2240, 2501, 2547 |
| TscAI | CASTG | 5 cut(s) | 534, 1450, 1630, 1852, 2107 |
| TseFI | GTSAC | 3 cut(s) | 529, 549, 1188 |
| TseI | GCWGC | 5 cut(s) | 680, 706, 1177, 1259, 2724 |
| Tsp45I | GTSAC | 3 cut(s) | 529, 549, 1188 |
| TspDTI | ATGAA | 8 cut(s) | 209, 740, 1119, 1273, 1821, 1968, 2293, 2522 |
| TspGWI | ACGGA | 2 cut(s) | 1098, 2685 |
| TspMI | CCCGGG | 1 cut(s) | 701 |
| TspRI | CASTG | 5 cut(s) | 534, 1450, 1630, 1852, 2107 |
| VneI | GTGCAC | 1 cut(s) | 1512 |
| VpaK11BI | GGWCC | 1 cut(s) | 1272 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1335 |
| XapI | RAATTY | 2 cut(s) | 259, 1206 |
| XbaI | TCTAGA | 2 cut(s) | 896, 1771 |
| XceI | RCATGY | 4 cut(s) | 346, 881, 920, 2229 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2278 |
| XmaI | CCCGGG | 1 cut(s) | 701 |
| XmiI | GTMKAC | 2 cut(s) | 403, 713 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1206, 2575 |
| Zsp2I | ATGCAT | 2 cut(s) | 2227, 2277 |