Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0011441

Physical Location & Seq

Genomic Coordinates Forward (+)

15574370 .. 15579951

Gene Structure 5582 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G143500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2847 bp

ATGAATGATAGTACAGGGAAAACGGGGTCGTCTTTGGCAATAGCAGAGAAGAAGACGCATAGGCCTGGTGGTTGTGTTGGCATTTTCTTCCAGCTCTTCGATTGGAACCGCAGGTTCGCCAAGAAGAAGCTCTTCTCCAAGAAATTGCTTCCTCCATCTCGTGCAAAACAAGTTTCAAAGAAGTTTAGAGATGAGAAGATGCCCAATTCCAAGCTTCATTTGATTGCTGATGAAAACAGTGGGGGTTTCCCAAATGTGAAGAAAAATGTGAATCGCAGCGTTGATTTTGAGCACAAGCATGAACTGCGAGCTCCAAGTTTGGTTGCTAGGCTAATGGGTCTTGAATCCATGCCTGCCACACGTGAGAACCCCAAGAAAGCTTCATTTACTGATGCTTGTGACAGTGGAGAGAAGACATTTTTGGATAATCATAGTGGTTCTGATAGAGCAGAATTGAATTTGGAGACAGGAAATGCAAAGTCTGAATCAAGGCCTCAGAAGCTGCAGAAAATGGGACCGTATGAGAAAAGGGCAGTGACTAGGTTTGGAGCTGAGGCACTTCAAATTAAGAGTGTTTTGTCACGCTCGAGAAAACATCACCCAAAGCTTGCTTCCCCAGCGAAGAGTCCAAGGATCCCCTCTGGGAAGAATGCTTCCCGAACCTCTCGGTTGATTGATGCTGCTACTAGAATTTTGGAACCTGGACTGCAGTCTACAAATAGAGCAAAATGTGCCATCACTTACTCAAGTTCTTTTGATTATCCTTCTGTGGATGAGGTTTTGGCAGATGGAACAACAGTTCAATCACCAGAGATTTCTAGCCAAGCATGTTATAATGTTGGTGCATCCAATTCTCTGATGAGCCAGACTTCTTGCAAAAGCTGTGGTAATTTAGTAGATGTTGTGGATTTAAGATCAAAAGTGGAGGAACAACAACCTGCTTTCCCATCCTTGGCTTCAAATATTGTCAATGGCTCTTCGCTGGTAGCGGAACAAAATAAGCCCAGGTCATCCATGTCCTCCTTTGGGCAAGAAAAGGATGCAATTTTTCAGGGAACTCGAAACCAACCAGTATCAGTTTCTGGTCAAAAGGGAATGCGATCCCTTGGTGAACCTGTTACAGAAAGGAAGTCTATGCCTCCCGAAGGTCAAGCTTCATGGCAGTTGTCAAGTCAACCATGCAAGCCTCAGAGTGAAGAGGCATCTTCTATTACCTTAAAGAACAGGTCTCAGATGCAGCATCGTATGTCACTAGGAAGGGAAAGAATTCCACCTAGATCAAAACTAAATAATCTTGATAGCAGAAGAGCCTCATCGGCTGCAAATGCTGTCAGAGAGACCAAAGACTTCGTTGCTTTGAACCGGAATCTGAGCGGTCGCGCCCAACCAAGGGTGCCTACCAAAGCAAACGATTCTAAGTTTGACACAGAGAGGAAAGCTTTTACTGGGAAAGATGATTACCCATCACAGCTTAGGACCACAATACGGAAGAGGAGAATGATCAATGTTAGCGGCCAAGTTGAAAGTAGTGGTCTTGTTAGTTCAAGTTCCACAAGACAAGTGAATTATCAGTTCGATGTGCCAACTCGAAAAGGATTAGGAAATGGTGCTCGCTTGATGAACACCACTTCTCCTAAGAGTAAATTACCCGGTCAGAGAGAAGGTAACAGAGCTAATGGAAATAAGGACACTGATGTTATTTCATTCACATTTAATTCCCCTATCAGGAACAAGACTGGAATCCCCACACAAATGGATGGTCCAAGCATGGACAATGGCACAAAGCCATCTTTCCAAAAACCATTGTCCTTGAGTGGAGATGCTATTGGTGCCTTTCTGGAACAAAAATTTAGAGAGCTTGCTTGTCAAGAAGATGATGACTTGGCAGCAGGTGCTTCATCCAAGAGGTCCACTGCTATGATTCTTCAAGAGCTAATATCTACCTTGACTGCCGATCATTCTCTTTCTCATGATGGACACATGGCCAGTGCAGATATAGAATCACCTGCTCAAAGAAAGACAGATAGGTCAGTTGGAATCTTTCATCATGGTGATAGTCTGAGCCCTGGGTCTGTTCTTGAAGCTTCATTTTCTTCTAGTAGTCTGGATGATAGCTCAGGGCATAGGTCCTTCTACCCTCACTTTATGGATTACTCTGATGATGCGTTGCAACTGGGACATTATGGTGATTTGATAGACTCTGCCACTTCAGTGGACAGAAAGAAGACTGGTAGTGAGATGATGACTGCCCTTGTCAATAATGTATCTAGGATATTACATAGCATCAATGCTGGTGGGGAAAGATTGAGAGGAGACAAGCTCACCCATGCAAATGAAGTTATCTTGAAAGCTGAACTATTGTTTGGAGATGTGACTCAGCATAAAATGGATGTAATGAAAGGTCTTTTCATCAGTCCCTTGCTTCTTGACTTGGAAACTATTGCCAGCAGCATGATGAAAATTTTCGATGTGTTAAGTAGTTTTGGGGACACCAAAGAGGGAACTAAAATCAGCGAGTTCCTTTTTGATTGTGTCATAGAGCATTTAGACTCAAAATATGGTCGATACTGTAACTCCGGATTCAGATTTTGGGAAAAATTGCCTTTATGCATGAACCGTAAGTTGATGATTCAAGAGGTTGAAGACGAGATGCAAAAGTGGACAGATTTGGCTGGAATGATTCCTGATGAGATGATAGAATGGGATATGAATCATGCCCTGGGGAAGTGGACTGATTTTAATATTGAAGCATTTGAGGCAGGTTCTGAAATTGACGGGGACATTCTTCAAAGTCTGGTTAACGAAGTTGTGGTAGATCTCCGTGAGTGCAGGCTGGGTTCCTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4378 VARLMGL

Protein Analysis

949

Amino Acids

104.48

Weight (kDa)

8.99

Isoelectric Point (pI)

51.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011441)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67040 AT1G67040
malus_domestica	MD09G1253500.v1.1 MD09G1253600.v1.1 MD17G1245400.v1.1
prunus_persica	Prupe.3G143500_v2.0.a1
pyrus_communis	pycom09g16950 pycom17g24780 pycom17g24790
rosa_chinensis	RchiOBHm_Chr2g0126071
rosa_laevigata	RLG00000018886
rosa_multiflora	Rmu_sc0001506.1_g000003
rosa_roxburghii	Rroxscaffold_2G00117460
rosa_rugosa	Rorug02G0260600 Rorug02G0260700
rosa_samantha	Rh2AG318100 Rh2BG326500 Rh2DG344500 Rh2DG344600
rosa_wichuraiana	Rw2G025760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	834
AarI	CACCTGC	2 cut(s)	1880, 2014
AasI	GACNNNNNNGTC	1 cut(s)	2026
Acc36I	ACCTGC	5 cut(s)	102, 946, 1880, 2014, 2750
AccB1I	GGYRCC	2 cut(s)	1393, 1829
AccBSI	CCGCTC	1 cut(s)	1374
AccI	GTMKAC	1 cut(s)	713
AccII	CGCG	1 cut(s)	1380
AccIII	TCCGGA	1 cut(s)	2576
AciI	CCGC	4 cut(s)	109, 989, 1374, 1512
AclWI	GGATC	3 cut(s)	628, 641, 1095
AcoI	YGGCCR	2 cut(s)	1513, 1983
AcsI	RAATTY	5 cut(s)	457, 690, 1266, 1847, 2460
AcuI	CTGAAG	1 cut(s)	2193
AcvI	CACGTG	1 cut(s)	362
AfaI	GTAC	1 cut(s)	13
AfiI	CCNNNNNNNGG	7 cut(s)	952, 1026, 1145, 1389, 1390, 1485, 1725
AflIII	ACRYGT	1 cut(s)	359
AjnI	CCWGG	5 cut(s)	64, 700, 1004, 2065, 2718
AjuI	GAANNNNNNNTTGG	6 cut(s)	404, 436, 595, 627, 2346, 2378
AleI	CACNNNNGTG	1 cut(s)	2210
AloI	GAACNNNNNNTCC	2 cut(s)	783, 815
Alw21I	GWGCWC	3 cut(s)	294, 313, 1612
Alw26I	GTCTC	4 cut(s)	458, 1233, 1331, 2307
AlwI	GGATC	3 cut(s)	628, 641, 1095
AlwNI	CAGNNNCTG	3 cut(s)	502, 1082, 2765
Ama87I	CYCGRG	1 cut(s)	586
Aor13HI	TCCGGA	1 cut(s)	2576
AoxI	GGCC	4 cut(s)	62, 491, 1513, 1983
ApeKI	GCWGC	7 cut(s)	276, 502, 680, 1237, 1319, 1886, 2448
ApoI	RAATTY	5 cut(s)	457, 690, 1266, 1847, 2460
ArsI	GACNNNNNNTTYG	2 cut(s)	1744, 1776
Asp700I	GAANNNNTTC	3 cut(s)	131, 1266, 2462
AspLEI	GCGC	1 cut(s)	1382
AspS9I	GGNCC	5 cut(s)	515, 1476, 1760, 1908, 2127
AsuC2I	CCSGG	1 cut(s)	1650
AsuHPI	GGTGA	7 cut(s)	590, 798, 1121, 1995, 2063, 2198, 2314
AvaI	CYCGRG	1 cut(s)	586
AvaII	GGWCC	5 cut(s)	515, 1476, 1760, 1908, 2127
BalI	TGGCCA	1 cut(s)	1985
BamHI	GGATCC	1 cut(s)	633
BanI	GGYRCC	2 cut(s)	1393, 1829
BanII	GRGCYC	2 cut(s)	313, 2066
BauI	CACGAG	1 cut(s)	159
BbrPI	CACGTG	1 cut(s)	362
BbsI	GAAGAC	4 cut(s)	59, 419, 2231, 2649
Bbv12I	GWGCWC	3 cut(s)	294, 313, 1612
BbvCI	CCTCAGC	1 cut(s)	552
BbvI	GCAGC	7 cut(s)	288, 489, 667, 1249, 1306, 1898, 2460
BccI	CCATC	8 cut(s)	163, 743, 782, 955, 1471, 1751, 1795, 1967
BciT130I	CCWGG	5 cut(s)	66, 702, 1006, 2067, 2720
BclI	TGATCA	1 cut(s)	1500
BcnI	CCSGG	1 cut(s)	1650
BcoDI	GTCTC	4 cut(s)	458, 1233, 1331, 2307
BfaI	CTAG	8 cut(s)	327, 540, 687, 819, 1253, 1275, 2097, 2268
BfmI	CTRYAG	2 cut(s)	503, 707
BfuAI	ACCTGC	5 cut(s)	102, 946, 1880, 2014, 2750
BglI	GCCNNNNNGGC	1 cut(s)	1316
BglII	AGATCT	1 cut(s)	2815
BisI	GCNGC	8 cut(s)	277, 503, 681, 1238, 1320, 1513, 1887, 2449
BlsI	GCNGC	8 cut(s)	278, 504, 682, 1239, 1321, 1514, 1888, 2450
Bme1390I	CCNGG	6 cut(s)	66, 702, 1006, 1650, 2067, 2720
Bme18I	GGWCC	5 cut(s)	515, 1476, 1760, 1908, 2127
BmeT110I	CYCGRG	1 cut(s)	586
BmgT120I	GGNCC	5 cut(s)	515, 1476, 1760, 1908, 2127
BmiI	GGNNCC	7 cut(s)	107, 516, 635, 699, 1395, 1831, 2839
BmrFI	CCNGG	6 cut(s)	66, 702, 1006, 1650, 2067, 2720
BmrI	ACTGGG	2 cut(s)	1455, 2183
BmuI	ACTGGG	2 cut(s)	1455, 2183
BoxI	GACNNNNGTC	1 cut(s)	709
BpiI	GAAGAC	4 cut(s)	59, 419, 2231, 2649
BplI	GAGNNNNNCTC	2 cut(s)	2304, 2336
Bpu10I	CCTNAGC	3 cut(s)	552, 1472, 2116
BpuEI	CTTGAG	2 cut(s)	730, 1831
BpuMI	CCSGG	1 cut(s)	1650
BsaAI	YACGTR	1 cut(s)	362
BsaBI	GATNNNNATC	1 cut(s)	2709
BsaI	GGTCTC	2 cut(s)	1233, 1331
BsaJI	CCNNGG	9 cut(s)	629, 951, 1004, 1105, 1388, 2065, 2066, 2718, 2719
BsaWI	WCCGGW	2 cut(s)	1362, 2576
BsaXI	ACNNNNNCTCC	4 cut(s)	1615, 1645, 2558, 2588
Bsc4I	CCNNNNNNNGG	7 cut(s)	952, 1026, 1145, 1389, 1390, 1485, 1725
Bse1I	ACTGG	6 cut(s)	1070, 1450, 1741, 1986, 2178, 2233
Bse8I	GATNNNNATC	1 cut(s)	2709
BseAI	TCCGGA	1 cut(s)	2576
BseBI	CCWGG	5 cut(s)	66, 702, 1006, 2067, 2720
BseDI	CCNNGG	9 cut(s)	629, 951, 1004, 1105, 1388, 2065, 2066, 2718, 2719
BseGI	GGATG	9 cut(s)	778, 845, 947, 1010, 1045, 1762, 1898, 2113, 2395
BseJI	GATNNNNATC	1 cut(s)	2709
BseLI	CCNNNNNNNGG	7 cut(s)	952, 1026, 1145, 1389, 1390, 1485, 1725
BseMII	CTCAG	8 cut(s)	509, 543, 1202, 1244, 1361, 2051, 2130, 2390
BseNI	ACTGG	6 cut(s)	1070, 1450, 1741, 1986, 2178, 2233
BseRI	GAGGAG	2 cut(s)	1507, 2325
BseXI	GCAGC	7 cut(s)	288, 489, 667, 1249, 1306, 1898, 2460
BseYI	CCCAGC	2 cut(s)	616, 2833
BsgI	GTGCAG	1 cut(s)	2010
Bsh1236I	CGCG	1 cut(s)	1380
Bsh1285I	CGRYCG	1 cut(s)	1378
BshFI	GGCC	4 cut(s)	64, 493, 1515, 1985
BshNI	GGYRCC	2 cut(s)	1393, 1829
BsiEI	CGRYCG	1 cut(s)	1378
BsiHKAI	GWGCWC	3 cut(s)	294, 313, 1612
BsiHKCI	CYCGRG	1 cut(s)	586
BsiSI	CCGG	3 cut(s)	1363, 1650, 2577
BslFI	GGGAC	5 cut(s)	528, 2190, 2400, 2501, 2792
BslI	CCNNNNNNNGG	7 cut(s)	952, 1026, 1145, 1389, 1390, 1485, 1725
BsmAI	GTCTC	4 cut(s)	458, 1233, 1331, 2307
BsmFI	GGGAC	5 cut(s)	528, 2190, 2400, 2501, 2792
BsmI	GAATGC	2 cut(s)	655, 1101
BsnI	GGCC	4 cut(s)	64, 493, 1515, 1985
Bso31I	GGTCTC	2 cut(s)	1233, 1331
BsoBI	CYCGRG	1 cut(s)	586
Bsp1286I	GDGCHC	4 cut(s)	294, 313, 1612, 2066
Bsp13I	TCCGGA	1 cut(s)	2576
Bsp143I	GATC	7 cut(s)	633, 914, 1100, 1277, 1500, 1954, 2815
BspACI	CCGC	4 cut(s)	109, 989, 1374, 1512
BspANI	GGCC	4 cut(s)	64, 493, 1515, 1985
BspCNI	CTCAG	8 cut(s)	508, 544, 1201, 1243, 1362, 2052, 2129, 2389
BspEI	TCCGGA	1 cut(s)	2576
BspFNI	CGCG	1 cut(s)	1380
BspHI	TCATGA	1 cut(s)	1969
BspLI	GGNNCC	7 cut(s)	107, 516, 635, 699, 1395, 1831, 2839
BspMAI	CTGCAG	2 cut(s)	507, 711
BspMI	ACCTGC	5 cut(s)	102, 946, 1880, 2014, 2750
BspPI	GGATC	3 cut(s)	628, 641, 1095
BspQI	GCTCTTC	4 cut(s)	101, 137, 982, 1300
BspT107I	GGYRCC	2 cut(s)	1393, 1829
BspTNI	GGTCTC	2 cut(s)	1233, 1331
BsrBI	CCGCTC	1 cut(s)	1374
BsrI	ACTGG	6 cut(s)	1070, 1450, 1741, 1986, 2178, 2233
BssECI	CCNNGG	9 cut(s)	629, 951, 1004, 1105, 1388, 2065, 2066, 2718, 2719
BssMI	GATC	7 cut(s)	633, 914, 1100, 1277, 1500, 1954, 2815
BssSI	CACGAG	1 cut(s)	159
BssT1I	CCWWGG	4 cut(s)	629, 951, 1105, 1388
Bst2BI	CACGAG	1 cut(s)	159
Bst2UI	CCWGG	5 cut(s)	66, 702, 1006, 2067, 2720
Bst4CI	ACNGT	6 cut(s)	239, 404, 519, 799, 2570, 2618
Bst6I	CTCTTC	7 cut(s)	101, 137, 617, 982, 1191, 1300, 1484
BstAPI	GCANNNNNTGC	3 cut(s)	304, 731, 1892
BstBAI	YACGTR	1 cut(s)	362
BstC8I	GCNNGC	8 cut(s)	309, 354, 609, 1184, 1612, 1860, 2446, 2831
BstENI	CCTNNNNNAGG	1 cut(s)	1143
BstF5I	GGATG	9 cut(s)	778, 845, 947, 1010, 1045, 1762, 1898, 2113, 2395
BstFNI	CGCG	1 cut(s)	1380
BstHHI	GCGC	1 cut(s)	1382
BstKTI	GATC	7 cut(s)	636, 917, 1103, 1280, 1503, 1957, 2818
BstMAI	GTCTC	4 cut(s)	458, 1233, 1331, 2307
BstMBI	GATC	7 cut(s)	633, 914, 1100, 1277, 1500, 1954, 2815
BstMCI	CGRYCG	1 cut(s)	1378
BstMWI	GCNNNNNNNGC	9 cut(s)	304, 499, 617, 731, 1316, 1325, 1829, 1892, 2756
BstNI	CCWGG	5 cut(s)	66, 702, 1006, 2067, 2720
BstNSI	RCATGY	1 cut(s)	831
BstPAI	GACNNNNGTC	1 cut(s)	709
BstSCI	CCNGG	6 cut(s)	64, 700, 1004, 1648, 2065, 2718
BstSFI	CTRYAG	2 cut(s)	503, 707
BstUI	CGCG	1 cut(s)	1380
BstV1I	GCAGC	7 cut(s)	288, 489, 667, 1249, 1306, 1898, 2460
BstV2I	GAAGAC	4 cut(s)	59, 419, 2231, 2649
BstX2I	RGATCY	2 cut(s)	633, 2815
BstXI	CCANNNNNNTGG	2 cut(s)	1753, 2212
BstYI	RGATCY	2 cut(s)	633, 2815
BsuRI	GGCC	4 cut(s)	64, 493, 1515, 1985
BtsCI	GGATG	9 cut(s)	778, 845, 947, 1010, 1045, 1762, 1898, 2113, 2395
BtsI	GCAGTG	2 cut(s)	540, 1911
BtsIMutI	CAGTG	7 cut(s)	244, 409, 540, 1689, 1911, 1993, 2217
BveI	ACCTGC	5 cut(s)	102, 946, 1880, 2014, 2750
Cac8I	GCNNGC	8 cut(s)	309, 354, 609, 1184, 1612, 1860, 2446, 2831
CaiI	CAGNNNCTG	3 cut(s)	502, 1082, 2765
CciI	TCATGA	1 cut(s)	1969
CfoI	GCGC	1 cut(s)	1382
Cfr13I	GGNCC	5 cut(s)	515, 1476, 1760, 1908, 2127
CseI	GACGC	1 cut(s)	64
Csp6I	GTAC	1 cut(s)	12
CspCI	CAANNNNNGTGG	4 cut(s)	865, 900, 2275, 2310
CviQI	GTAC	1 cut(s)	12
DpnI	GATC	7 cut(s)	635, 916, 1102, 1279, 1502, 1956, 2817
DpnII	GATC	7 cut(s)	633, 914, 1100, 1277, 1500, 1954, 2815
DrdI	GACNNNNNNGTC	1 cut(s)	2026
DseDI	GACNNNNNNGTC	1 cut(s)	2026
EaeI	YGGCCR	2 cut(s)	1513, 1983
Eam1104I	CTCTTC	7 cut(s)	101, 137, 617, 982, 1191, 1300, 1484
EarI	CTCTTC	7 cut(s)	101, 137, 617, 982, 1191, 1300, 1484
Ecl136II	GAGCTC	1 cut(s)	311
Eco130I	CCWWGG	4 cut(s)	629, 951, 1105, 1388
Eco147I	AGGCCT	2 cut(s)	64, 493
Eco24I	GRGCYC	2 cut(s)	313, 2066
Eco31I	GGTCTC	2 cut(s)	1233, 1331
Eco47I	GGWCC	5 cut(s)	515, 1476, 1760, 1908, 2127
Eco53kI	GAGCTC	1 cut(s)	311
Eco57I	CTGAAG	1 cut(s)	2193
Eco72I	CACGTG	1 cut(s)	362
Eco88I	CYCGRG	1 cut(s)	586
EcoICRI	GAGCTC	1 cut(s)	311
EcoNI	CCTNNNNNAGG	1 cut(s)	1143
EcoO109I	RGGNCCY	1 cut(s)	2127
EcoRI	GAATTC	1 cut(s)	1266
EcoRII	CCWGG	5 cut(s)	64, 700, 1004, 2065, 2718
EcoT14I	CCWWGG	4 cut(s)	629, 951, 1105, 1388
EcoT22I	ATGCAT	1 cut(s)	2612
EcoT38I	GRGCYC	2 cut(s)	313, 2066
ErhI	CCWWGG	4 cut(s)	629, 951, 1105, 1388
FalI	AAGNNNNNCTT	2 cut(s)	116, 148
FaqI	GGGAC	5 cut(s)	528, 2190, 2400, 2501, 2792
FbaI	TGATCA	1 cut(s)	1500
FblI	GTMKAC	1 cut(s)	713
Fnu4HI	GCNGC	8 cut(s)	277, 503, 681, 1238, 1320, 1513, 1887, 2449
FokI	GGATG	9 cut(s)	785, 832, 934, 997, 1052, 1769, 1885, 2120, 2402
FriOI	GRGCYC	2 cut(s)	313, 2066
Fsp4HI	GCNGC	8 cut(s)	277, 503, 681, 1238, 1320, 1513, 1887, 2449
FspBI	CTAG	8 cut(s)	327, 540, 687, 819, 1253, 1275, 2097, 2268
GlaI	GCGC	1 cut(s)	1381
GluI	GCNGC	8 cut(s)	277, 503, 681, 1238, 1320, 1513, 1887, 2449
GsaI	CCCAGC	2 cut(s)	620, 2837
HaeIII	GGCC	4 cut(s)	64, 493, 1515, 1985
HapII	CCGG	3 cut(s)	1363, 1650, 2577
HgaI	GACGC	1 cut(s)	64
HhaI	GCGC	1 cut(s)	1382
Hin6I	GCGC	1 cut(s)	1380
HinP1I	GCGC	1 cut(s)	1380
HincII	GTYRAC	2 cut(s)	1175, 2800
HindII	GTYRAC	2 cut(s)	1175, 2800
HindIII	AAGCTT	6 cut(s)	212, 378, 605, 1152, 1437, 2082
HpaI	GTTAAC	1 cut(s)	2800
HpaII	CCGG	3 cut(s)	1363, 1650, 2577
HphI	GGTGA	7 cut(s)	590, 798, 1121, 1995, 2063, 2198, 2314
Hpy166II	GTNNAC	8 cut(s)	714, 1112, 1175, 1911, 2215, 2661, 2730, 2800
Hpy8I	GTNNAC	8 cut(s)	714, 1112, 1175, 1911, 2215, 2661, 2730, 2800
HpyAV	CCTTC	5 cut(s)	774, 1139, 1251, 1655, 2140
HpyCH4III	ACNGT	6 cut(s)	239, 404, 519, 799, 2570, 2618
HpyCH4IV	ACGT	1 cut(s)	361
HpyF10VI	GCNNNNNNNGC	9 cut(s)	304, 499, 617, 731, 1316, 1325, 1829, 1892, 2756
HpySE526I	ACGT	1 cut(s)	361
HspAI	GCGC	1 cut(s)	1380
Kpn2I	TCCGGA	1 cut(s)	2576
Ksp22I	TGATCA	1 cut(s)	1500
KspAI	GTTAAC	1 cut(s)	2800
Kzo9I	GATC	7 cut(s)	633, 914, 1100, 1277, 1500, 1954, 2815
LguI	GCTCTTC	4 cut(s)	101, 137, 982, 1300
LmnI	GCTCC	2 cut(s)	316, 548
Lsp1109I	GCAGC	7 cut(s)	288, 489, 667, 1249, 1306, 1898, 2460
MaeI	CTAG	8 cut(s)	327, 540, 687, 819, 1253, 1275, 2097, 2268
MaeII	ACGT	1 cut(s)	361
MaeIII	GTNAC	8 cut(s)	398, 535, 579, 1117, 1248, 1664, 2371, 2570
MalI	GATC	7 cut(s)	635, 916, 1102, 1279, 1502, 1956, 2817
MbiI	CCGCTC	1 cut(s)	1374
MboI	GATC	7 cut(s)	633, 914, 1100, 1277, 1500, 1954, 2815
MflI	RGATCY	2 cut(s)	633, 2815
MhlI	GDGCHC	4 cut(s)	294, 313, 1612, 2066
MlsI	TGGCCA	1 cut(s)	1985
MluNI	TGGCCA	1 cut(s)	1985
MlyI	GAGTC	4 cut(s)	634, 2192, 2368, 2543
MmeI	TCCRAC	1 cut(s)	2014
Mox20I	TGGCCA	1 cut(s)	1985
Mph1103I	ATGCAT	1 cut(s)	2612
MroI	TCCGGA	1 cut(s)	2576
MroXI	GAANNNNTTC	3 cut(s)	131, 1266, 2462
MscI	TGGCCA	1 cut(s)	1985
MseI	TTAA	7 cut(s)	567, 911, 1217, 1713, 2474, 2739, 2799
MslI	CAYNNNNRTG	7 cut(s)	297, 1751, 1916, 2049, 2184, 2210, 2331
Msp20I	TGGCCA	1 cut(s)	1985
MspI	CCGG	3 cut(s)	1363, 1650, 2577
MspR9I	CCNGG	6 cut(s)	66, 702, 1006, 1650, 2067, 2720
Mva1269I	GAATGC	2 cut(s)	655, 1101
MvaI	CCWGG	5 cut(s)	66, 702, 1006, 2067, 2720
MvnI	CGCG	1 cut(s)	1380
MwoI	GCNNNNNNNGC	9 cut(s)	304, 499, 617, 731, 1316, 1325, 1829, 1892, 2756
NciI	CCSGG	1 cut(s)	1650
NdeII	GATC	7 cut(s)	633, 914, 1100, 1277, 1500, 1954, 2815
NlaIV	GGNNCC	7 cut(s)	107, 516, 635, 699, 1395, 1831, 2839
NmuCI	GTSAC	5 cut(s)	398, 535, 579, 1248, 2371
NsiI	ATGCAT	1 cut(s)	2612
NspI	RCATGY	1 cut(s)	831
OliI	CACNNNNGTG	1 cut(s)	2210
PaeR7I	CTCGAG	1 cut(s)	586
PagI	TCATGA	1 cut(s)	1969
PaqCI	CACCTGC	2 cut(s)	1880, 2014
PasI	CCCWGGG	2 cut(s)	2066, 2719
PceI	AGGCCT	2 cut(s)	64, 493
PciSI	GCTCTTC	4 cut(s)	101, 137, 982, 1300
PctI	GAATGC	2 cut(s)	655, 1101
PdmI	GAANNNNTTC	3 cut(s)	131, 1266, 2462
PkrI	GCNGC	8 cut(s)	278, 504, 682, 1239, 1321, 1514, 1888, 2450
PleI	GAGTC	4 cut(s)	633, 2192, 2368, 2543
PmaCI	CACGTG	1 cut(s)	362
PmlI	CACGTG	1 cut(s)	362
PpsI	GAGTC	4 cut(s)	633, 2192, 2368, 2543
Ppu21I	YACGTR	1 cut(s)	362
PpuMI	RGGWCCY	1 cut(s)	2127
PshAI	GACNNNNGTC	1 cut(s)	709
PsiI	TTATAA	1 cut(s)	834
Psp124BI	GAGCTC	1 cut(s)	313
Psp5II	RGGWCCY	1 cut(s)	2127
Psp6I	CCWGG	5 cut(s)	64, 700, 1004, 2065, 2718
PspCI	CACGTG	1 cut(s)	362
PspFI	CCCAGC	2 cut(s)	616, 2833
PspGI	CCWGG	5 cut(s)	64, 700, 1004, 2065, 2718
PspN4I	GGNNCC	7 cut(s)	107, 516, 635, 699, 1395, 1831, 2839
PspPI	GGNCC	5 cut(s)	515, 1476, 1760, 1908, 2127
PspPPI	RGGWCCY	1 cut(s)	2127
PstI	CTGCAG	2 cut(s)	507, 711
PstNI	CAGNNNCTG	3 cut(s)	502, 1082, 2765
PsuI	RGATCY	2 cut(s)	633, 2815
RsaI	GTAC	1 cut(s)	13
RsaNI	GTAC	1 cut(s)	12
RseI	CAYNNNNRTG	7 cut(s)	297, 1751, 1916, 2049, 2184, 2210, 2331
SacI	GAGCTC	1 cut(s)	313
SapI	GCTCTTC	4 cut(s)	101, 137, 982, 1300
SaqAI	TTAA	7 cut(s)	567, 911, 1217, 1713, 2474, 2739, 2799
SatI	GCNGC	8 cut(s)	277, 503, 681, 1238, 1320, 1513, 1887, 2449
Sau3AI	GATC	7 cut(s)	633, 914, 1100, 1277, 1500, 1954, 2815
Sau96I	GGNCC	5 cut(s)	515, 1476, 1760, 1908, 2127
SchI	GAGTC	4 cut(s)	634, 2192, 2368, 2543
ScrFI	CCNGG	6 cut(s)	66, 702, 1006, 1650, 2067, 2720
SduI	GDGCHC	4 cut(s)	294, 313, 1612, 2066
SfcI	CTRYAG	2 cut(s)	503, 707
Sfr274I	CTCGAG	1 cut(s)	586
SinI	GGWCC	5 cut(s)	515, 1476, 1760, 1908, 2127
SlaI	CTCGAG	1 cut(s)	586
SmiMI	CAYNNNNRTG	7 cut(s)	297, 1751, 1916, 2049, 2184, 2210, 2331
SmlI	CTYRAG	3 cut(s)	586, 745, 1810
SmoI	CTYRAG	3 cut(s)	586, 745, 1810
SseBI	AGGCCT	2 cut(s)	64, 493
SsiI	CCGC	4 cut(s)	109, 989, 1374, 1512
SspI	AATATT	2 cut(s)	964, 2743
SspMI	CTAG	8 cut(s)	327, 540, 687, 819, 1253, 1275, 2097, 2268
SstI	GAGCTC	1 cut(s)	313
StuI	AGGCCT	2 cut(s)	64, 493
StyD4I	CCNGG	6 cut(s)	64, 700, 1004, 1648, 2065, 2718
StyI	CCWWGG	4 cut(s)	629, 951, 1105, 1388
TaaI	ACNGT	6 cut(s)	239, 404, 519, 799, 2570, 2618
TaiI	ACGT	1 cut(s)	364
TaqI	TCGA	7 cut(s)	99, 587, 1060, 1575, 1588, 2466, 2563
TatI	WGTACW	1 cut(s)	11
TauI	GCSGC	1 cut(s)	1515
Tru1I	TTAA	7 cut(s)	567, 911, 1217, 1713, 2474, 2739, 2799
Tru9I	TTAA	7 cut(s)	567, 911, 1217, 1713, 2474, 2739, 2799
TscAI	CASTG	7 cut(s)	244, 409, 540, 1696, 1918, 1993, 2217
TseFI	GTSAC	5 cut(s)	398, 535, 579, 1248, 2371
TseI	GCWGC	7 cut(s)	276, 502, 680, 1237, 1319, 1886, 2448
Tsp45I	GTSAC	5 cut(s)	398, 535, 579, 1248, 2371
TspGWI	ACGGA	2 cut(s)	1501, 2810
TspRI	CASTG	7 cut(s)	244, 409, 540, 1696, 1918, 1993, 2217
VpaK11BI	GGWCC	5 cut(s)	515, 1476, 1760, 1908, 2127
XagI	CCTNNNNNAGG	1 cut(s)	1143
XapI	RAATTY	5 cut(s)	457, 690, 1266, 1847, 2460
XceI	RCATGY	1 cut(s)	831
XhoI	CTCGAG	1 cut(s)	586
XmiI	GTMKAC	1 cut(s)	713
XmnI	GAANNNNTTC	3 cut(s)	131, 1266, 2462
XspI	CTAG	8 cut(s)	327, 540, 687, 819, 1253, 1275, 2097, 2268
Zsp2I	ATGCAT	1 cut(s)	2612

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.