Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0011441

Physical Location & Seq

Genomic Coordinates Forward (+)

27361686 .. 27364016

Gene Structure 2331 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0260600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2331 bp

ATGGAGTTTGCCACCAGCATTGCAGAGAACGTCTTGGGTAGGCTAGCTTCACATGCTTCCCAAGAGATCTCCTTGGCATGGGGTGCCCAACTTGAGCTCAACAACACCTTATTTGCCATCAAACTAGTGCTCGAGGATGCAGAGAAGAAGCAAGTGAGGAATCCCCTAATCACTCGTTGGTTGAGAAATCTCAAAGATGTTTGTCATGACGTTGATGATGTCTTGGATGAACTAGACTTCCAAAAGTTGCGGTTGAAAGTGGAGGTCGACAACTGTGGGAAGATCAAAGGAAAGGTACGCCAATTTTTTTCCCGATGGAATCCAGTAGTGTTTAACTTCAAAATGGGACATAAAGTGAAAGAGATTAGAGAAAGACTAGTTGAAATTGATAATCAAAAGAGACAGTTTGCTCTCCTTGAGTTTGCTAAGATAGCTGAAGATCACCATGCGCCCCAAGGGATGCATGATAATAAAAGAGAGACTGACTCTTTAGTGGAGCCTTCAGATGTTATTGGGAGAGATGATGATAAAAAACAGATTGTTAGTTATCTCTTAAATAACACTGATATCTCTAGTGGGGAGAATGTTTCAGTTATTTCCATCCTTGGGTCAGGAGGGTTGGGAAAGACAACTCTCGCTAAATTAGTGTATAATGATAGCATGGTAGAGGAGAAATTTGAGATGAAAATGTGGATATGCGTCTCAGACAACTTTGATATCCGAACATTAATTCGCGGTATTATCAGTGCTGCAATTAAACAAACATGTGAGGATGAAAGTTTGGACCTTATGAAAAGAAGATTGCAAGATACTTTGCGAGGTAGAAGATTTTTGTTAGTGTTGGATGATATCTGGGATACAGAGTCAATTGGAATAACAACTGAAAAATGGATTGATTTAAAAACTTTGTTAAATGTGGGAGCTAAGGGAAGCAAAATCATCATAACAACACGAAATAAAGCAGTTGCTTTACTTGTGAGTCCCTTATGCATGCATTCTTTAGAAGGTCTTCCCCACAAACACTGCATGTCATTGTTTATCAAAAGGGCATTTAAGAAAGGAGAAGAGCAACGCTATCAACATTTGATAAAAATTGGAGAGGATATTGTGAAGAAGTGTGGAGGAGTTCCTTTAGCGGTAACTACCGTAGGGAGCATGCTTTATTTGAATACAGAGCAACACCAATGGTTGAGTGTCAGAGATGATGACATGTGGAGTATAGGGAATGATAATATTTTACCTGCACTCAAATTGAGCTATGATGCACTGCCACAACACTTGAAACCGTGTTTTGCATTTTGTTCACTTTTCCCAAAGGATTTTGAATTCAATAGTGCAATGTTGGTTTCATTGTGGATGGCACAAGGATACCTCAAGACATCTAAGAAAAATGAAGATTTTGAACAGATGGGTTTAGACTATATAAGGCAGTTTTGCACTCGATCTTTGTTTCAAGTCGAGTGGGATCTCAAAACAACCGTAATTTTTAAAATACATGATCTAGTTCATGATTTAGCAATTTCGGTGACACAAGTAGAGTACTCCACAGTCAATTGTCGTCCCTCTAGTGCTTTGGAAATGATTCGACATGTGTCAATATCTAAAAAAGACTTGCTTGGAGAAGAGGCAGAAGTTCCCGATTTCATGTTCAAGTCAAAGAAATTGCGTACCATTCTACTTCCTAAAGATGGCCAAATGAGTCAACGTTTTGTGAAGACATGCATCTCGAGATTCAAATATATGCGGGTGCTAGATCTCAGTGGGTCGCCTCTTGAGGAGCTACCAAGTTCCATTGGTAGTTTGTTTCATTTGAGATTCCTCAACTTGTCTGGTAATAGTGAGATAAAAAGGCTTCCCAATTCCATCAGTAAGCTGCTGAATTTGGAGACCTTGGCCCTTCAGGGTTGCGACGCACTCGAGGAGATACCCAAAGACATAAGGAACCTGATCAACCTACGAAGCTTGACGATAACAACCCAACAGACCTATTTGCCAAAAGGAATTAGACGCCTCACCTCGCTTCAATATCTGTATTTTTATGGATGTGTCAATCTTAAATCTTTGGGCGAAGAGATTCAATTCCTCAACAACCTTCGTAAATTGTGGATTAGAAGTTGTAATAATTTGGAATCCTTGCCACCAAATATGAAACACATGACTGCTTTAGATACTTTGGGTGTCGGTGATTGCGAGAAGCTTCAGGTGATGATGAGATCAGGGGAAGGTCCTCAACGTCTTCGATCATTGGTTATCGAGAATTCAAGTTTGGAGGCTTTGCCCCCTTGGCTCATTGAAGATTCTACAGAGCATAGGACTTGGTGGATGTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4378 VARLMGL

Protein Analysis

776

Amino Acids

88.82

Weight (kDa)

7.81

Isoelectric Point (pI)

45.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	9 - 90	3.2e-15	Rx N-terminal domain
NB-ARC	PF00931	178 - 353	7e-31	NB-ARC domain
WHD_DRP	PF23559	436 - 506	4.5e-20	Disease resistance protein Winged helix domain
LRR_14	PF23598	574 - 763	5.3e-28	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011441)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67040 AT1G67040
malus_domestica	MD09G1253500.v1.1 MD09G1253600.v1.1 MD17G1245400.v1.1
prunus_persica	Prupe.3G143500_v2.0.a1
pyrus_communis	pycom09g16950 pycom17g24780 pycom17g24790
rosa_chinensis	RchiOBHm_Chr2g0126071
rosa_laevigata	RLG00000018886
rosa_multiflora	Rmu_sc0001506.1_g000003
rosa_roxburghii	Rroxscaffold_2G00117460
rosa_rugosa	Rorug02G0260600 Rorug02G0260700
rosa_samantha	Rh2AG318100 Rh2BG326500 Rh2DG344500 Rh2DG344600
rosa_wichuraiana	Rw2G025760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1249
AccB1I	GGYRCC	1 cut(s)	83
AccI	GTMKAC	1 cut(s)	267
AccII	CGCG	1 cut(s)	735
AciI	CCGC	4 cut(s)	250, 735, 1136, 1744
AclI	AACGTT	1 cut(s)	1705
AclWI	GGATC	1 cut(s)	1473
AcoI	YGGCCR	1 cut(s)	1690
AcsI	RAATTY	4 cut(s)	674, 1325, 1879, 2257
AcuI	CTGAAG	4 cut(s)	456, 486, 1883, 2183
AcyI	GRCGYC	1 cut(s)	2008
AfaI	GTAC	3 cut(s)	297, 1541, 1669
AfiI	CCNNNNNNNGG	3 cut(s)	78, 606, 1688
AflIII	ACRYGT	3 cut(s)	764, 1209, 1588
AhlI	ACTAGT	2 cut(s)	124, 376
AjuI	GAANNNNNNNTTGG	2 cut(s)	2249, 2281
AloI	GAACNNNNNNTCC	2 cut(s)	222, 254
AluBI	AGCT	9 cut(s)	47, 97, 434, 923, 1257, 1780, 1873, 1962, 2197
AluI	AGCT	9 cut(s)	47, 97, 434, 923, 1257, 1780, 1873, 1962, 2197
Alw21I	GWGCWC	2 cut(s)	99, 132
Alw26I	GTCTC	4 cut(s)	394, 473, 706, 1880
AlwI	GGATC	1 cut(s)	1473
Ama87I	CYCGRG	3 cut(s)	131, 1726, 1916
AoxI	GGCC	2 cut(s)	1690, 1893
ApeKI	GCWGC	2 cut(s)	749, 1873
ApoI	RAATTY	4 cut(s)	674, 1325, 1879, 2257
AseI	ATTAAT	1 cut(s)	728
Asp700I	GAANNNNTTC	3 cut(s)	1008, 1581, 2073
AspLEI	GCGC	1 cut(s)	451
AspS9I	GGNCC	3 cut(s)	784, 1894, 2225
AsuHPI	GGTGA	5 cut(s)	434, 1537, 2005, 2195, 2215
AsuNHI	GCTAGC	1 cut(s)	43
AvaI	CYCGRG	3 cut(s)	131, 1726, 1916
AvaII	GGWCC	2 cut(s)	784, 2225
BaeGI	GKGCMC	1 cut(s)	88
BalI	TGGCCA	1 cut(s)	1692
BanI	GGYRCC	1 cut(s)	83
BanII	GRGCYC	1 cut(s)	99
BarI	GAAGNNNNNNTAC	2 cut(s)	31, 63
BbsI	GAAGAC	3 cut(s)	1001, 1721, 2228
Bbv12I	GWGCWC	2 cut(s)	99, 132
BbvI	GCAGC	2 cut(s)	736, 1860
BccI	CCATC	7 cut(s)	125, 309, 608, 1351, 1402, 1682, 1871
BciVI	GTATCC	2 cut(s)	850, 1361
BclI	TGATCA	1 cut(s)	1947
BcoDI	GTCTC	4 cut(s)	394, 473, 706, 1880
BcuI	ACTAGT	2 cut(s)	124, 376
BfaI	CTAG	8 cut(s)	44, 125, 233, 377, 573, 1502, 1566, 1751
BfmI	CTRYAG	1 cut(s)	2301
BfuAI	ACCTGC	1 cut(s)	1249
BfuI	GTATCC	2 cut(s)	850, 1361
BglI	GCCNNNNNGGC	1 cut(s)	2284
BglII	AGATCT	2 cut(s)	66, 1753
BisI	GCNGC	2 cut(s)	750, 1874
BlsI	GCNGC	2 cut(s)	751, 1875
BmcAI	AGTACT	1 cut(s)	1541
Bme18I	GGWCC	2 cut(s)	784, 2225
BmeT110I	CYCGRG	3 cut(s)	131, 1726, 1916
BmgT120I	GGNCC	3 cut(s)	784, 1894, 2225
BmiI	GGNNCC	3 cut(s)	85, 498, 1943
BmsI	GCATC	4 cut(s)	127, 450, 1252, 1731
BmtI	GCTAGC	1 cut(s)	47
BoxI	GACNNNNGTC	1 cut(s)	1591
BpiI	GAAGAC	3 cut(s)	1001, 1721, 2228
BplI	GAGNNNNNCTC	2 cut(s)	470, 502
Bpu10I	CCTNAGC	1 cut(s)	924
BpuEI	CTTGAG	4 cut(s)	113, 437, 1358, 1793
BsaHI	GRCGYC	1 cut(s)	2008
BsaI	GGTCTC	1 cut(s)	1880
BsaJI	CCNNGG	5 cut(s)	72, 454, 604, 1890, 2282
Bsc4I	CCNNNNNNNGG	3 cut(s)	78, 606, 1688
Bse1I	ACTGG	1 cut(s)	323
Bse3DI	GCAATG	2 cut(s)	18, 1344
BseDI	CCNNGG	5 cut(s)	72, 454, 604, 1890, 2282
BseGI	GGATG	9 cut(s)	142, 232, 465, 600, 778, 850, 1362, 2048, 2328
BseLI	CCNNNNNNNGG	3 cut(s)	78, 606, 1688
BseMI	GCAATG	2 cut(s)	18, 1344
BseMII	CTCAG	2 cut(s)	717, 1771
BseNI	ACTGG	1 cut(s)	323
BseRI	GAGGAG	4 cut(s)	683, 1137, 1790, 1934
BseSI	GKGCMC	1 cut(s)	88
BseXI	GCAGC	2 cut(s)	736, 1860
BsgI	GTGCAG	1 cut(s)	1227
Bsh1236I	CGCG	1 cut(s)	735
BshFI	GGCC	2 cut(s)	1692, 1895
BshNI	GGYRCC	1 cut(s)	83
BsiHKAI	GWGCWC	2 cut(s)	99, 132
BsiHKCI	CYCGRG	3 cut(s)	131, 1726, 1916
BslFI	GGGAC	3 cut(s)	360, 966, 1545
BslI	CCNNNNNNNGG	3 cut(s)	78, 606, 1688
BsmAI	GTCTC	4 cut(s)	394, 473, 706, 1880
BsmBI	CGTCTC	1 cut(s)	706
BsmFI	GGGAC	3 cut(s)	360, 966, 1545
BsmI	GAATGC	1 cut(s)	994
BsnI	GGCC	2 cut(s)	1692, 1895
Bso31I	GGTCTC	1 cut(s)	1880
BsoBI	CYCGRG	3 cut(s)	131, 1726, 1916
Bsp1286I	GDGCHC	3 cut(s)	88, 99, 132
BspACI	CCGC	4 cut(s)	250, 735, 1136, 1744
BspANI	GGCC	2 cut(s)	1692, 1895
BspCNI	CTCAG	2 cut(s)	716, 1770
BspFNI	CGCG	1 cut(s)	735
BspHI	TCATGA	2 cut(s)	205, 1507
BspLI	GGNNCC	3 cut(s)	85, 498, 1943
BspMI	ACCTGC	1 cut(s)	1249
BspOI	GCTAGC	1 cut(s)	47
BspPI	GGATC	1 cut(s)	1473
BspQI	GCTCTTC	1 cut(s)	1059
BspT107I	GGYRCC	1 cut(s)	83
BspTNI	GGTCTC	1 cut(s)	1880
BsrDI	GCAATG	2 cut(s)	18, 1344
BsrI	ACTGG	1 cut(s)	323
BssECI	CCNNGG	5 cut(s)	72, 454, 604, 1890, 2282
BssNI	GRCGYC	1 cut(s)	2008
BssT1I	CCWWGG	5 cut(s)	72, 454, 604, 1890, 2282
Bst4CI	ACNGT	6 cut(s)	275, 405, 1147, 1287, 1480, 1549
Bst6I	CTCTTC	3 cut(s)	1059, 1617, 2064
BstACI	GRCGYC	1 cut(s)	2008
BstAPI	GCANNNNNTGC	1 cut(s)	83
BstC8I	GCNNGC	3 cut(s)	45, 992, 1157
BstDEI	CTNAG	5 cut(s)	426, 703, 924, 1383, 1757
BstF5I	GGATG	9 cut(s)	142, 232, 465, 600, 778, 850, 1362, 2048, 2328
BstFNI	CGCG	1 cut(s)	735
BstHHI	GCGC	1 cut(s)	451
BstMAI	GTCTC	4 cut(s)	394, 473, 706, 1880
BstMWI	GCNNNNNNNGC	4 cut(s)	53, 83, 431, 2284
BstNSI	RCATGY	8 cut(s)	56, 768, 994, 1030, 1159, 1213, 1592, 1722
BstPAI	GACNNNNGTC	1 cut(s)	1591
BstSFI	CTRYAG	1 cut(s)	2301
BstSLI	GKGCMC	1 cut(s)	88
BstUI	CGCG	1 cut(s)	735
BstV1I	GCAGC	2 cut(s)	736, 1860
BstV2I	GAAGAC	3 cut(s)	1001, 1721, 2228
BstX2I	RGATCY	3 cut(s)	66, 1465, 1753
BstYI	RGATCY	3 cut(s)	66, 1465, 1753
BsuI	GTATCC	2 cut(s)	850, 1361
BsuRI	GGCC	2 cut(s)	1692, 1895
BtsCI	GGATG	9 cut(s)	142, 232, 465, 600, 778, 850, 1362, 2048, 2328
BtsI	GCAGTG	2 cut(s)	1021, 1265
BtsIMutI	CAGTG	5 cut(s)	561, 751, 1021, 1265, 1765
BveI	ACCTGC	1 cut(s)	1249
Cac8I	GCNNGC	3 cut(s)	45, 992, 1157
CciI	TCATGA	2 cut(s)	205, 1507
CfoI	GCGC	1 cut(s)	451
Cfr13I	GGNCC	3 cut(s)	784, 1894, 2225
CseI	GACGC	3 cut(s)	688, 1919, 2016
Csp6I	GTAC	3 cut(s)	296, 1540, 1668
CspCI	CAANNNNNGTGG	5 cut(s)	36, 1260, 1295, 1442, 1477
CviQI	GTAC	3 cut(s)	296, 1540, 1668
DdeI	CTNAG	5 cut(s)	426, 703, 924, 1383, 1757
DraI	TTTAAA	2 cut(s)	900, 1489
EaeI	YGGCCR	1 cut(s)	1690
Eam1104I	CTCTTC	3 cut(s)	1059, 1617, 2064
EarI	CTCTTC	3 cut(s)	1059, 1617, 2064
Ecl136II	GAGCTC	1 cut(s)	97
Eco130I	CCWWGG	5 cut(s)	72, 454, 604, 1890, 2282
Eco24I	GRGCYC	1 cut(s)	99
Eco31I	GGTCTC	1 cut(s)	1880
Eco32I	GATATC	3 cut(s)	568, 718, 850
Eco47I	GGWCC	2 cut(s)	784, 2225
Eco53kI	GAGCTC	1 cut(s)	97
Eco57I	CTGAAG	4 cut(s)	456, 486, 1883, 2183
Eco88I	CYCGRG	3 cut(s)	131, 1726, 1916
EcoICRI	GAGCTC	1 cut(s)	97
EcoO109I	RGGNCCY	1 cut(s)	2225
EcoRI	GAATTC	2 cut(s)	1325, 2257
EcoRV	GATATC	3 cut(s)	568, 718, 850
EcoT14I	CCWWGG	5 cut(s)	72, 454, 604, 1890, 2282
EcoT22I	ATGCAT	4 cut(s)	465, 992, 996, 1724
EcoT38I	GRGCYC	1 cut(s)	99
ErhI	CCWWGG	5 cut(s)	72, 454, 604, 1890, 2282
Esp3I	CGTCTC	1 cut(s)	706
FalI	AAGNNNNNCTT	2 cut(s)	1599, 1631
FaqI	GGGAC	3 cut(s)	360, 966, 1545
FauI	CCCGC	1 cut(s)	1737
FbaI	TGATCA	1 cut(s)	1947
FblI	GTMKAC	1 cut(s)	267
Fnu4HI	GCNGC	2 cut(s)	750, 1874
FokI	GGATG	8 cut(s)	149, 239, 472, 587, 785, 857, 1369, 2055
FriOI	GRGCYC	1 cut(s)	99
Fsp4HI	GCNGC	2 cut(s)	750, 1874
FspBI	CTAG	8 cut(s)	44, 125, 233, 377, 573, 1502, 1566, 1751
GlaI	GCGC	1 cut(s)	450
GluI	GCNGC	2 cut(s)	750, 1874
HaeIII	GGCC	2 cut(s)	1692, 1895
HgaI	GACGC	3 cut(s)	688, 1919, 2016
HhaI	GCGC	1 cut(s)	451
Hin1I	GRCGYC	1 cut(s)	2008
Hin6I	GCGC	1 cut(s)	449
HinP1I	GCGC	1 cut(s)	449
HincII	GTYRAC	2 cut(s)	268, 1703
HindII	GTYRAC	2 cut(s)	268, 1703
HindIII	AAGCTT	2 cut(s)	1960, 2195
HphI	GGTGA	5 cut(s)	434, 1537, 2005, 2195, 2215
Hpy166II	GTNNAC	3 cut(s)	268, 1304, 1703
Hpy188I	TCNGA	4 cut(s)	505, 706, 722, 1199
Hpy8I	GTNNAC	3 cut(s)	268, 1304, 1703
Hpy99I	CGWCG	1 cut(s)	1913
HpyAV	CCTTC	5 cut(s)	510, 998, 1907, 2102, 2216
HpyCH4III	ACNGT	6 cut(s)	275, 405, 1147, 1287, 1480, 1549
HpyCH4IV	ACGT	4 cut(s)	30, 210, 1705, 2233
HpyF10VI	GCNNNNNNNGC	4 cut(s)	53, 83, 431, 2284
HpyF3I	CTNAG	5 cut(s)	426, 703, 924, 1383, 1757
HpySE526I	ACGT	4 cut(s)	30, 210, 1705, 2233
Hsp92I	GRCGYC	1 cut(s)	2008
HspAI	GCGC	1 cut(s)	449
Ksp22I	TGATCA	1 cut(s)	1947
LguI	GCTCTTC	1 cut(s)	1059
LmnI	GCTCC	4 cut(s)	496, 920, 1152, 1777
Lsp1109I	GCAGC	2 cut(s)	736, 1860
LweI	GCATC	4 cut(s)	127, 450, 1252, 1731
MaeI	CTAG	8 cut(s)	44, 125, 233, 377, 573, 1502, 1566, 1751
MaeII	ACGT	4 cut(s)	30, 210, 1705, 2233
MaeIII	GTNAC	2 cut(s)	1138, 1525
MfeI	CAATTG	2 cut(s)	867, 1552
MflI	RGATCY	3 cut(s)	66, 1465, 1753
MhlI	GDGCHC	3 cut(s)	88, 99, 132
MlsI	TGGCCA	1 cut(s)	1692
MluNI	TGGCCA	1 cut(s)	1692
MlyI	GAGTC	4 cut(s)	479, 872, 988, 1708
MmeI	TCCRAC	1 cut(s)	822
Mox20I	TGGCCA	1 cut(s)	1692
Mph1103I	ATGCAT	4 cut(s)	465, 992, 996, 1724
MroXI	GAANNNNTTC	3 cut(s)	1008, 1581, 2073
MscI	TGGCCA	1 cut(s)	1692
MseI	TTAA	9 cut(s)	333, 554, 728, 756, 899, 911, 1053, 1488, 2055
Msp20I	TGGCCA	1 cut(s)	1692
MunI	CAATTG	2 cut(s)	867, 1552
Mva1269I	GAATGC	1 cut(s)	994
MvnI	CGCG	1 cut(s)	735
MwoI	GCNNNNNNNGC	4 cut(s)	53, 83, 431, 2284
NheI	GCTAGC	1 cut(s)	43
NlaIV	GGNNCC	3 cut(s)	85, 498, 1943
NmuCI	GTSAC	1 cut(s)	1525
NsiI	ATGCAT	4 cut(s)	465, 992, 996, 1724
NspI	RCATGY	8 cut(s)	56, 768, 994, 1030, 1159, 1213, 1592, 1722
PaeI	GCATGC	2 cut(s)	994, 1159
PaeR7I	CTCGAG	3 cut(s)	131, 1726, 1916
PagI	TCATGA	2 cut(s)	205, 1507
PciI	ACATGT	3 cut(s)	764, 1209, 1588
PciSI	GCTCTTC	1 cut(s)	1059
PcsI	WCGNNNNNNNCGW	1 cut(s)	2187
PctI	GAATGC	1 cut(s)	994
PdmI	GAANNNNTTC	3 cut(s)	1008, 1581, 2073
PfeI	GAWTC	8 cut(s)	160, 319, 1582, 1731, 1815, 2074, 2129, 2297
PkrI	GCNGC	2 cut(s)	751, 1875
PleI	GAGTC	4 cut(s)	479, 871, 987, 1707
PpsI	GAGTC	4 cut(s)	479, 871, 987, 1707
PpuMI	RGGWCCY	1 cut(s)	2225
PscI	ACATGT	3 cut(s)	764, 1209, 1588
PshAI	GACNNNNGTC	1 cut(s)	1591
PshBI	ATTAAT	1 cut(s)	728
Psp124BI	GAGCTC	1 cut(s)	99
Psp1406I	AACGTT	1 cut(s)	1705
Psp5II	RGGWCCY	1 cut(s)	2225
PspN4I	GGNNCC	3 cut(s)	85, 498, 1943
PspPI	GGNCC	3 cut(s)	784, 1894, 2225
PspPPI	RGGWCCY	1 cut(s)	2225
PspXI	VCTCGAGB	2 cut(s)	131, 1916
PsuI	RGATCY	3 cut(s)	66, 1465, 1753
RsaI	GTAC	3 cut(s)	297, 1541, 1669
RsaNI	GTAC	3 cut(s)	296, 1540, 1668
SacI	GAGCTC	1 cut(s)	99
SalI	GTCGAC	1 cut(s)	266
SapI	GCTCTTC	1 cut(s)	1059
SaqAI	TTAA	9 cut(s)	333, 554, 728, 756, 899, 911, 1053, 1488, 2055
SatI	GCNGC	2 cut(s)	750, 1874
Sau96I	GGNCC	3 cut(s)	784, 1894, 2225
ScaI	AGTACT	1 cut(s)	1541
SchI	GAGTC	4 cut(s)	479, 872, 988, 1708
SduI	GDGCHC	3 cut(s)	88, 99, 132
SfaNI	GCATC	4 cut(s)	127, 450, 1252, 1731
SfcI	CTRYAG	1 cut(s)	2301
Sfr274I	CTCGAG	3 cut(s)	131, 1726, 1916
SinI	GGWCC	2 cut(s)	784, 2225
SlaI	CTCGAG	3 cut(s)	131, 1726, 1916
SmlI	CTYRAG	7 cut(s)	92, 131, 416, 1373, 1726, 1772, 1916
SmoI	CTYRAG	7 cut(s)	92, 131, 416, 1373, 1726, 1772, 1916
SpeI	ACTAGT	2 cut(s)	124, 376
SphI	GCATGC	2 cut(s)	994, 1159
SsiI	CCGC	4 cut(s)	250, 735, 1136, 1744
SspI	AATATT	1 cut(s)	1234
SspMI	CTAG	8 cut(s)	44, 125, 233, 377, 573, 1502, 1566, 1751
SstI	GAGCTC	1 cut(s)	99
StyI	CCWWGG	5 cut(s)	72, 454, 604, 1890, 2282
TaaI	ACNGT	6 cut(s)	275, 405, 1147, 1287, 1480, 1549
TaiI	ACGT	4 cut(s)	33, 213, 1708, 2236
TaqI	TCGA	9 cut(s)	132, 267, 1441, 1458, 1585, 1727, 1917, 2239, 2253
TatI	WGTACW	1 cut(s)	1539
TfiI	GAWTC	8 cut(s)	160, 319, 1582, 1731, 1815, 2074, 2129, 2297
Tru1I	TTAA	9 cut(s)	333, 554, 728, 756, 899, 911, 1053, 1488, 2055
Tru9I	TTAA	9 cut(s)	333, 554, 728, 756, 899, 911, 1053, 1488, 2055
TscAI	CASTG	5 cut(s)	568, 751, 1028, 1272, 1765
TseFI	GTSAC	1 cut(s)	1525
TseI	GCWGC	2 cut(s)	749, 1873
Tsp45I	GTSAC	1 cut(s)	1525
TspRI	CASTG	5 cut(s)	568, 751, 1028, 1272, 1765
VpaK11BI	GGWCC	2 cut(s)	784, 2225
VspI	ATTAAT	1 cut(s)	728
XapI	RAATTY	4 cut(s)	674, 1325, 1879, 2257
XceI	RCATGY	8 cut(s)	56, 768, 994, 1030, 1159, 1213, 1592, 1722
XhoI	CTCGAG	3 cut(s)	131, 1726, 1916
XmiI	GTMKAC	1 cut(s)	267
XmnI	GAANNNNTTC	3 cut(s)	1008, 1581, 2073
XspI	CTAG	8 cut(s)	44, 125, 233, 377, 573, 1502, 1566, 1751
ZrmI	AGTACT	1 cut(s)	1541
Zsp2I	ATGCAT	4 cut(s)	465, 992, 996, 1724

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.