Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0011441

Physical Location & Seq

Genomic Coordinates Reverse (-)

41904056 .. 41907800

Gene Structure 3745 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018886

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2754 bp

ATGGATGATGGTACAGCCGGGAAAATGGCGTCGTCTTTGATCATTCCAGAGAAGCCGACGCACAGGCCTGGTGGTTGTGTTGGTATTTTCTTTCAGCTCTTCGATTGGAAACGCAGGTTCGCCAAGAAAAAGCTCTTCTCCCAGAAACTGCTTCCTCCATCTCGTGCGAAACAACTACTCAACAAGTTTGGAGATGACAAGATGCCCATTTCTAGGCTTCATTTGATAGCTGATGAGAATAGTGGGAACCTGAAGAAAAATTTAAATTATTCTTGTGCTTCTGGTCAAAAGCATGAGCTTCGAGCTCCAGGTTTGGTTGCTAGGCTAATGGGTCTTGAATATATGCCTGCGGCCCATGGGAAGCCTCACGATAGTCAAGTTACTCATGCTTGTGATGGTCGACAGAAGGAAAAAATCAAGAACCAAAATGTTTCTGATAGACAAGAGCTTTTGGAAAAAGGAGAAGCAAAGCCTGAATCAAGGCCTCAAAAGCTTCAGAAAATGGGACTCTATGATAAAACAGCAGTGACTAGGTTTGGAGCTGAGTCACTTCAAGTCAAGAGTGTTTTACCAAGATCGAGAAAGCATCATCAGCAGCAGAAGCTTGCTTCTCCAGTCAAGAGTTCAAAGATCTCCTCCGGTAAGACTGCCTCACGAACCTGTCGGTTGATTGGTGCTGCTACAAAAATCTTGGATCCCGGGCTGCAGTCTACGAATAGAGCCAAATGTGCTCTCATCAGCTCTTTTCATCATCCTCAAGCGGATTCAACCCTGGCTCAATTACCAGACGTATCTAAGAAGACACACTATGGTGCTGGTAAGGGCAACAAGGGCAACTCTCTGATGGGGCAGACCTGTTGCAAAGAGTGTGGTAATTTGCTACATGTTCCAGACTTAACATCTAGAGTGGGGGAACAACAACATGTTTTCCCATCCTATGCTTCAAATATTACTAATTCCTGTTCTCTGTTAGCAGAACAAAGTAGGCCATCCATATTCTCCTTTGCGGAAGCAAAGGATTCAATCTTTCAGAGAACAAGAGACCAACCTTTATCAGTTTCTGGTCAAAAGAACATTAGAACCCATGGCAAACCTTTTAAGGAAAGAAAGGCTCCGTCTCCTGTAGGTCAAGCTTCATGCCAATTGTCAAGTCAACCATATAAGCCTCACAGATATCAGATGCAGCCCCCAATGTCACTAGGGAAGGAAAGAATTCCACCCAGATATAAACCAAATAATCTTGATAGCAGAAGAGCCTCATCGGCTGCAAATGCTGTTAGAGGGACCAAAGACTTCGTTGACTTGAACCGAAGTCTAAGCAATCATACCTGCCCGATGGTGCCTACCAAAGGGAAAGATTCAAAGTTTGAGAGAGAAAGGAAAGCATTTATTGGGAAGGATGATTCCCCATTCCAGTTAAGGACCTCAATAAGAAAGAGGAGGATGATCCATGTAAATGGACAGGTTACAAATACAGGTATTGTTACTTCAACTACCACATCACTAAGGAACACTCAGTTTGGTGCACCAGCAGGGAATGGATTAGGAAATGGTACCGACTTAATGAGCCAGACTTGTGCTAATAGTGAATTAGCTGATAAACAAGATGGTAACAGAGCTTATGGAAATACAGACACTGATGTCATGTCATTCACATTTAATTCCCCCATAACGAGTAAGACTGGAATATCGGCAGAAATGGAGGGTACAGGCATGGACAATGATGGAAAGATCTATTTCCAAAAACCATTGTCATTGAGTAGAGATGCTATTGGTGTTTTTCTAGAACAAAAGTTGAGGGAGCTAGCTTGTCTTGAAGATGATGACTTGGCGATAGGTGCTTCATCCAAGAGATCCACTGCTATGATTCACGATGGCCACATTTCGAGTTATTCTCAGAAAATCTTTACAGCCAAAGGGAAGCCAAAGAAGTCGACTGGAACATCTCTTGATGGTGATCATCTGAGCCCTGGGTCTGTTCTTGAAGCTTCATTCTCCTCTAGTAGTATGGATCATAGCTCAGGGCGCAGATCCTTTTACCCTATCTCTCTCGAGTACCCTGATGATCATTTGCAAGCACAAGGATATGATACTGATCTTACAGGCTCTGCCACTTCCGGGGGCAGAAAGAAGACCAGTAGAGAGATGATGATTACTCTTGTCAACAATGTATGTAGGATATTGCATAGCATCAATGCGTATGGGGAGAGAGTGAGAAGAAGGAAGCTGACTCATGCATGTGAAATTATCTTAAATGCTGAACTATTGTTTGGAGATGCAACCATGCATAACATGGATGGAATGGAAGGGTCTTTCATGAGTCCCTTTATTCGTGATCTGGAAACTATTGCTAGTAGCAGGATGACTAGTTTCAATATGTTTGGTGGTTTGGAGGATATCGAAAAGGGAAGTCAACTAGATGGGTTATTTTTTGACTGTGTTATAGAGACTATAGACGCGAAGTATGCCTGGTACTGTAACGCAGGGTTCAGCTATTGGAAAGAGCTGCCTTTAAGCATGAACCAGAAATTGATATTTCAAGAGGTTGAAGAGGAAATTAAGAAATGGACACGCTTGTCTGGAATGATTTCTGATGAGATTGTGGCTTGGGAGATGAGTCATTCCTTCAGGAAATGGACAGAGTTTGACATCGAGGCTTTTGAGGCTGGATATGAAATTGACGGAGACATTCTTCAAACTTTGGTCAATGAGGTTGCGATAGACCTGTGGGAGTGCAGCATTGGCTCCTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4378 VARLMGL

Protein Analysis

918

Amino Acids

101.59

Weight (kDa)

9.16

Isoelectric Point (pI)

48.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VARLMGL	PF14383	96 - 119	7e-11	DUF761-associated sequence motif
DUF4378	PF14309	807 - 904	2.6e-15	Domain of unknown function (DUF4378)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011441)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67040 AT1G67040
malus_domestica	MD09G1253500.v1.1 MD09G1253600.v1.1 MD17G1245400.v1.1
prunus_persica	Prupe.3G143500_v2.0.a1
pyrus_communis	pycom09g16950 pycom17g24780 pycom17g24790
rosa_chinensis	RchiOBHm_Chr2g0126071
rosa_laevigata	RLG00000018886
rosa_multiflora	Rmu_sc0001506.1_g000003
rosa_roxburghii	Rroxscaffold_2G00117460
rosa_rugosa	Rorug02G0260600 Rorug02G0260700
rosa_samantha	Rh2AG318100 Rh2BG326500 Rh2DG344500 Rh2DG344600
rosa_wichuraiana	Rw2G025760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1640, 2575
Acc36I	ACCTGC	2 cut(s)	105, 1337
Acc65I	GGTACC	1 cut(s)	1553
AccB1I	GGYRCC	2 cut(s)	1339, 1553
AccI	GTMKAC	3 cut(s)	400, 710, 1934
AccII	CGCG	1 cut(s)	2459
AciI	CCGC	3 cut(s)	350, 761, 1007
AclWI	GGATC	6 cut(s)	689, 702, 1441, 1848, 2019, 2025
AcoI	YGGCCR	1 cut(s)	1876
AcsI	RAATTY	2 cut(s)	259, 1212
AcuI	CTGAAG	3 cut(s)	272, 479, 2611
AcyI	GRCGYC	1 cut(s)	29
AfaI	GTAC	5 cut(s)	13, 1555, 1708, 2057, 2474
AfiI	CCNNNNNNNGG	3 cut(s)	213, 1349, 2118
AflIII	ACRYGT	2 cut(s)	883, 922
AhlI	ACTAGT	1 cut(s)	2366
AjnI	CCWGG	5 cut(s)	67, 307, 771, 1969, 2468
AjuI	GAANNNNNNNTTGG	2 cut(s)	2253, 2285
AleI	CACNNNNGTG	1 cut(s)	810
Alw21I	GWGCWC	3 cut(s)	307, 733, 1528
Alw26I	GTCTC	4 cut(s)	1035, 1122, 2441, 2679
Alw44I	GTGCAC	1 cut(s)	1524
AlwI	GGATC	6 cut(s)	689, 702, 1441, 1848, 2019, 2025
AlwNI	CAGNNNCTG	4 cut(s)	148, 1061, 1637, 2108
Ama87I	CYCGRG	2 cut(s)	698, 2051
AoxI	GGCC	5 cut(s)	65, 351, 482, 986, 1876
ApaLI	GTGCAC	1 cut(s)	1524
ApeKI	GCWGC	7 cut(s)	595, 677, 703, 1183, 1265, 2506, 2736
ApoI	RAATTY	2 cut(s)	259, 1212
Asp700I	GAANNNNTTC	2 cut(s)	1212, 2587
Asp718I	GGTACC	1 cut(s)	1553
AspLEI	GCGC	1 cut(s)	2028
AspS9I	GGNCC	3 cut(s)	352, 1284, 1422
AsuC2I	CCSGG	4 cut(s)	19, 699, 700, 2119
AsuHPI	GGTGA	1 cut(s)	1967
AsuNHI	GCTAGC	1 cut(s)	1804
AvaI	CYCGRG	2 cut(s)	698, 2051
AvaII	GGWCC	2 cut(s)	1284, 1422
BaeGI	GKGCMC	1 cut(s)	1528
BalI	TGGCCA	1 cut(s)	1878
BamHI	GGATCC	1 cut(s)	694
BanI	GGYRCC	2 cut(s)	1339, 1553
BanII	GRGCYC	2 cut(s)	307, 1970
BarI	GAAGNNNNNNTAC	2 cut(s)	1471, 1503
BauI	CACGAG	1 cut(s)	162
BbsI	GAAGAC	2 cut(s)	806, 2138
Bbv12I	GWGCWC	3 cut(s)	307, 733, 1528
BbvI	GCAGC	7 cut(s)	607, 664, 690, 1195, 1252, 2493, 2748
BcgI	CGANNNNNNTGC	2 cut(s)	281, 315
BciT130I	CCWGG	5 cut(s)	69, 309, 773, 1971, 2470
BclI	TGATCA	3 cut(s)	39, 1957, 2065
BcnI	CCSGG	4 cut(s)	19, 699, 700, 2119
BcoDI	GTCTC	4 cut(s)	1035, 1122, 2441, 2679
BcuI	ACTAGT	1 cut(s)	2366
BfmI	CTRYAG	3 cut(s)	704, 1122, 2451
BfuAI	ACCTGC	2 cut(s)	105, 1337
BglI	GCCNNNNNGGC	1 cut(s)	1262
BglII	AGATCT	2 cut(s)	630, 1731
BisI	GCNGC	8 cut(s)	351, 596, 678, 704, 1184, 1266, 2507, 2737
BlsI	GCNGC	8 cut(s)	352, 597, 679, 705, 1185, 1267, 2508, 2738
Bme1390I	CCNGG	9 cut(s)	19, 69, 309, 699, 700, 773, 1971, 2119, 2470
Bme18I	GGWCC	2 cut(s)	1284, 1422
BmeT110I	CYCGRG	2 cut(s)	698, 2051
BmgT120I	GGNCC	3 cut(s)	352, 1284, 1422
BmiI	GGNNCC	7 cut(s)	248, 696, 1113, 1285, 1341, 1555, 2746
BmrFI	CCNGG	9 cut(s)	19, 69, 309, 699, 700, 773, 1971, 2119, 2470
BmsI	GCATC	6 cut(s)	192, 595, 1170, 1756, 2199, 2266
BmtI	GCTAGC	1 cut(s)	1808
BpiI	GAAGAC	2 cut(s)	806, 2138
BplI	GAGNNNNNCTC	2 cut(s)	1879, 1911
BpmI	CTGGAG	2 cut(s)	291, 597
Bpu10I	CCTNAGC	1 cut(s)	2020
BpuEI	CTTGAG	1 cut(s)	741
BpuMI	CCSGG	4 cut(s)	19, 699, 700, 2119
BsaBI	GATNNNNATC	2 cut(s)	1956, 2094
BsaHI	GRCGYC	1 cut(s)	29
BsaI	GGTCTC	1 cut(s)	1035
BsaJI	CCNNGG	7 cut(s)	355, 698, 771, 1084, 1969, 1970, 2118
BsaWI	WCCGGW	1 cut(s)	638
Bsc4I	CCNNNNNNNGG	3 cut(s)	213, 1349, 2118
Bse1I	ACTGG	5 cut(s)	614, 1414, 1687, 1942, 2136
Bse8I	GATNNNNATC	2 cut(s)	1956, 2094
BseBI	CCWGG	5 cut(s)	69, 309, 773, 1971, 2470
BseDI	CCNNGG	7 cut(s)	355, 698, 771, 1084, 1969, 1970, 2118
BseGI	GGATG	9 cut(s)	10, 751, 932, 989, 1405, 1449, 1844, 2302, 2367
BseJI	GATNNNNATC	2 cut(s)	1956, 2094
BseLI	CCNNNNNNNGG	3 cut(s)	213, 1349, 2118
BseMII	CTCAG	5 cut(s)	534, 1529, 1910, 1955, 2034
BseNI	ACTGG	5 cut(s)	614, 1414, 1687, 1942, 2136
BseRI	GAGGAG	3 cut(s)	625, 1453, 1987
BseSI	GKGCMC	1 cut(s)	1528
BseXI	GCAGC	7 cut(s)	607, 664, 690, 1195, 1252, 2493, 2748
Bsh1236I	CGCG	1 cut(s)	2459
BshFI	GGCC	5 cut(s)	67, 353, 484, 988, 1878
BshNI	GGYRCC	2 cut(s)	1339, 1553
BsiHKAI	GWGCWC	3 cut(s)	307, 733, 1528
BsiHKCI	CYCGRG	2 cut(s)	698, 2051
BsiSI	CCGG	4 cut(s)	18, 639, 699, 2118
BslFI	GGGAC	3 cut(s)	519, 1297, 2307
BslI	CCNNNNNNNGG	3 cut(s)	213, 1349, 2118
BsmAI	GTCTC	4 cut(s)	1035, 1122, 2441, 2679
BsmBI	CGTCTC	1 cut(s)	1122
BsmFI	GGGAC	3 cut(s)	519, 1297, 2307
BsnI	GGCC	5 cut(s)	67, 353, 484, 988, 1878
Bso31I	GGTCTC	1 cut(s)	1035
BsoBI	CYCGRG	2 cut(s)	698, 2051
Bsp1286I	GDGCHC	4 cut(s)	307, 733, 1528, 1970
Bsp19I	CCATGG	2 cut(s)	355, 1084
BspACI	CCGC	3 cut(s)	350, 761, 1007
BspANI	GGCC	5 cut(s)	67, 353, 484, 988, 1878
BspCNI	CTCAG	5 cut(s)	535, 1528, 1909, 1956, 2033
BspFNI	CGCG	1 cut(s)	2459
BspHI	TCATGA	1 cut(s)	2316
BspLI	GGNNCC	7 cut(s)	248, 696, 1113, 1285, 1341, 1555, 2746
BspMAI	CTGCAG	1 cut(s)	708
BspMI	ACCTGC	2 cut(s)	105, 1337
BspOI	GCTAGC	1 cut(s)	1808
BspPI	GGATC	6 cut(s)	689, 702, 1441, 1848, 2019, 2025
BspQI	GCTCTTC	3 cut(s)	104, 140, 1246
BspT107I	GGYRCC	2 cut(s)	1339, 1553
BspTNI	GGTCTC	1 cut(s)	1035
BsrI	ACTGG	5 cut(s)	614, 1414, 1687, 1942, 2136
BssECI	CCNNGG	7 cut(s)	355, 698, 771, 1084, 1969, 1970, 2118
BssNI	GRCGYC	1 cut(s)	29
BssSI	CACGAG	1 cut(s)	162
BssT1I	CCWWGG	2 cut(s)	355, 1084
Bst2BI	CACGAG	1 cut(s)	162
Bst2UI	CCWGG	5 cut(s)	69, 309, 773, 1971, 2470
Bst4CI	ACNGT	2 cut(s)	2438, 2477
Bst6I	CTCTTC	4 cut(s)	104, 140, 1246, 2544
BstACI	GRCGYC	1 cut(s)	29
BstC8I	GCNNGC	4 cut(s)	348, 606, 1806, 2076
BstDEI	CTNAG	8 cut(s)	543, 795, 1316, 1505, 1515, 1896, 1964, 2020
BstDSI	CCRYGG	2 cut(s)	355, 1084
BstENI	CCTNNNNNAGG	1 cut(s)	1347
BstF5I	GGATG	9 cut(s)	10, 751, 932, 989, 1405, 1449, 1844, 2302, 2367
BstFNI	CGCG	1 cut(s)	2459
BstHHI	GCGC	1 cut(s)	2028
BstMAI	GTCTC	4 cut(s)	1035, 1122, 2441, 2679
BstNI	CCWGG	5 cut(s)	69, 309, 773, 1971, 2470
BstNSI	RCATGY	3 cut(s)	887, 926, 2241
BstSCI	CCNGG	9 cut(s)	17, 67, 307, 697, 698, 771, 1969, 2117, 2468
BstSFI	CTRYAG	3 cut(s)	704, 1122, 2451
BstSLI	GKGCMC	1 cut(s)	1528
BstUI	CGCG	1 cut(s)	2459
BstV1I	GCAGC	7 cut(s)	607, 664, 690, 1195, 1252, 2493, 2748
BstV2I	GAAGAC	2 cut(s)	806, 2138
BstX2I	RGATCY	5 cut(s)	630, 694, 1731, 1853, 2030
BstXI	CCANNNNNNTGG	1 cut(s)	1457
BstYI	RGATCY	5 cut(s)	630, 694, 1731, 1853, 2030
BsuRI	GGCC	5 cut(s)	67, 353, 484, 988, 1878
BtgI	CCRYGG	2 cut(s)	355, 1084
BtsCI	GGATG	9 cut(s)	10, 751, 932, 989, 1405, 1449, 1844, 2302, 2367
BtsI	GCAGTG	2 cut(s)	531, 1857
BtsIMutI	CAGTG	3 cut(s)	531, 1635, 1857
BveI	ACCTGC	2 cut(s)	105, 1337
Cac8I	GCNNGC	4 cut(s)	348, 606, 1806, 2076
CaiI	CAGNNNCTG	4 cut(s)	148, 1061, 1637, 2108
CciI	TCATGA	1 cut(s)	2316
CfoI	GCGC	1 cut(s)	2028
Cfr13I	GGNCC	3 cut(s)	352, 1284, 1422
Cfr9I	CCCGGG	1 cut(s)	698
CseI	GACGC	3 cut(s)	18, 67, 2465
Csp6I	GTAC	5 cut(s)	12, 1554, 1707, 2056, 2473
CspCI	CAANNNNNGTGG	2 cut(s)	850, 885
CviQI	GTAC	5 cut(s)	12, 1554, 1707, 2056, 2473
DdeI	CTNAG	8 cut(s)	543, 795, 1316, 1505, 1515, 1896, 1964, 2020
DraI	TTTAAA	1 cut(s)	264
DrdI	GACNNNNNNGTC	2 cut(s)	1640, 2575
DseDI	GACNNNNNNGTC	2 cut(s)	1640, 2575
EaeI	YGGCCR	1 cut(s)	1876
Eam1104I	CTCTTC	4 cut(s)	104, 140, 1246, 2544
EarI	CTCTTC	4 cut(s)	104, 140, 1246, 2544
Ecl136II	GAGCTC	1 cut(s)	305
Eco130I	CCWWGG	2 cut(s)	355, 1084
Eco147I	AGGCCT	2 cut(s)	67, 484
Eco24I	GRGCYC	2 cut(s)	307, 1970
Eco31I	GGTCTC	1 cut(s)	1035
Eco32I	GATATC	2 cut(s)	1175, 2398
Eco47I	GGWCC	2 cut(s)	1284, 1422
Eco53kI	GAGCTC	1 cut(s)	305
Eco57I	CTGAAG	3 cut(s)	272, 479, 2611
Eco88I	CYCGRG	2 cut(s)	698, 2051
EcoICRI	GAGCTC	1 cut(s)	305
EcoNI	CCTNNNNNAGG	1 cut(s)	1347
EcoO109I	RGGNCCY	1 cut(s)	1422
EcoRI	GAATTC	1 cut(s)	1212
EcoRII	CCWGG	5 cut(s)	67, 307, 771, 1969, 2468
EcoRV	GATATC	2 cut(s)	1175, 2398
EcoT14I	CCWWGG	2 cut(s)	355, 1084
EcoT22I	ATGCAT	2 cut(s)	2239, 2289
EcoT38I	GRGCYC	2 cut(s)	307, 1970
ErhI	CCWWGG	2 cut(s)	355, 1084
Esp3I	CGTCTC	1 cut(s)	1122
FaqI	GGGAC	3 cut(s)	519, 1297, 2307
FbaI	TGATCA	3 cut(s)	39, 1957, 2065
FblI	GTMKAC	3 cut(s)	400, 710, 1934
Fnu4HI	GCNGC	8 cut(s)	351, 596, 678, 704, 1184, 1266, 2507, 2737
FokI	GGATG	9 cut(s)	17, 738, 919, 976, 1412, 1456, 1831, 2309, 2374
FriOI	GRGCYC	2 cut(s)	307, 1970
Fsp4HI	GCNGC	8 cut(s)	351, 596, 678, 704, 1184, 1266, 2507, 2737
GlaI	GCGC	1 cut(s)	2027
GluI	GCNGC	8 cut(s)	351, 596, 678, 704, 1184, 1266, 2507, 2737
GsuI	CTGGAG	2 cut(s)	291, 597
HaeIII	GGCC	5 cut(s)	67, 353, 484, 988, 1878
HapII	CCGG	4 cut(s)	18, 639, 699, 2118
HgaI	GACGC	3 cut(s)	18, 67, 2465
HhaI	GCGC	1 cut(s)	2028
Hin1I	GRCGYC	1 cut(s)	29
Hin6I	GCGC	1 cut(s)	2026
HinP1I	GCGC	1 cut(s)	2026
HincII	GTYRAC	6 cut(s)	401, 1154, 1300, 1935, 2164, 2414
HindII	GTYRAC	6 cut(s)	401, 1154, 1300, 1935, 2164, 2414
HindIII	AAGCTT	4 cut(s)	491, 602, 1131, 1986
HpaII	CCGG	4 cut(s)	18, 639, 699, 2118
HphI	GGTGA	1 cut(s)	1967
Hpy166II	GTNNAC	8 cut(s)	401, 711, 1154, 1300, 1526, 1935, 2164, 2414
Hpy188I	TCNGA	8 cut(s)	436, 498, 843, 1032, 1179, 1899, 1965, 2593
Hpy8I	GTNNAC	8 cut(s)	401, 711, 1154, 1300, 1526, 1935, 2164, 2414
Hpy99I	CGWCG	2 cut(s)	34, 61
HpyAV	CCTTC	6 cut(s)	400, 1198, 1390, 2214, 2300, 2635
HpyCH4III	ACNGT	2 cut(s)	2438, 2477
HpyCH4IV	ACGT	1 cut(s)	789
HpyF3I	CTNAG	8 cut(s)	543, 795, 1316, 1505, 1515, 1896, 1964, 2020
HpySE526I	ACGT	1 cut(s)	789
Hsp92I	GRCGYC	1 cut(s)	29
HspAI	GCGC	1 cut(s)	2026
KpnI	GGTACC	1 cut(s)	1557
Ksp22I	TGATCA	3 cut(s)	39, 1957, 2065
LguI	GCTCTTC	3 cut(s)	104, 140, 1246
LmnI	GCTCC	5 cut(s)	310, 539, 1117, 1801, 2750
Lsp1109I	GCAGC	7 cut(s)	607, 664, 690, 1195, 1252, 2493, 2748
LweI	GCATC	6 cut(s)	192, 595, 1170, 1756, 2199, 2266
MaeII	ACGT	1 cut(s)	789
MaeIII	GTNAC	8 cut(s)	379, 526, 546, 1194, 1465, 1483, 1610, 2477
MfeI	CAATTG	1 cut(s)	1142
MflI	RGATCY	5 cut(s)	630, 694, 1731, 1853, 2030
MhlI	GDGCHC	4 cut(s)	307, 733, 1528, 1970
MlsI	TGGCCA	1 cut(s)	1878
MluNI	TGGCCA	1 cut(s)	1878
MlyI	GAGTC	5 cut(s)	501, 554, 2224, 2329, 2626
Mox20I	TGGCCA	1 cut(s)	1878
Mph1103I	ATGCAT	2 cut(s)	2239, 2289
MroXI	GAANNNNTTC	2 cut(s)	1212, 2587
MscI	TGGCCA	1 cut(s)	1878
MseI	TTAA	9 cut(s)	263, 896, 1098, 1418, 1562, 1659, 2252, 2513, 2559
MslI	CAYNNNNRTG	5 cut(s)	390, 810, 1455, 1862, 2238
Msp20I	TGGCCA	1 cut(s)	1878
MspI	CCGG	4 cut(s)	18, 639, 699, 2118
MspR9I	CCNGG	9 cut(s)	19, 69, 309, 699, 700, 773, 1971, 2119, 2470
MunI	CAATTG	1 cut(s)	1142
MvaI	CCWGG	5 cut(s)	69, 309, 773, 1971, 2470
MvnI	CGCG	1 cut(s)	2459
NciI	CCSGG	4 cut(s)	19, 699, 700, 2119
NcoI	CCATGG	2 cut(s)	355, 1084
NheI	GCTAGC	1 cut(s)	1804
NlaIV	GGNNCC	7 cut(s)	248, 696, 1113, 1285, 1341, 1555, 2746
NmuCI	GTSAC	3 cut(s)	526, 546, 1194
NsiI	ATGCAT	2 cut(s)	2239, 2289
NspI	RCATGY	3 cut(s)	887, 926, 2241
OliI	CACNNNNGTG	1 cut(s)	810
PaeR7I	CTCGAG	1 cut(s)	2051
PagI	TCATGA	1 cut(s)	2316
PasI	CCCWGGG	1 cut(s)	1970
PceI	AGGCCT	2 cut(s)	67, 484
PciI	ACATGT	2 cut(s)	883, 922
PciSI	GCTCTTC	3 cut(s)	104, 140, 1246
PdmI	GAANNNNTTC	2 cut(s)	1212, 2587
PfeI	GAWTC	6 cut(s)	476, 764, 1019, 1358, 1403, 1867
PkrI	GCNGC	8 cut(s)	352, 597, 679, 705, 1185, 1267, 2508, 2738
PleI	GAGTC	5 cut(s)	501, 553, 2224, 2328, 2625
PpsI	GAGTC	5 cut(s)	501, 553, 2224, 2328, 2625
PpuMI	RGGWCCY	1 cut(s)	1422
PscI	ACATGT	2 cut(s)	883, 922
Psp124BI	GAGCTC	1 cut(s)	307
Psp5II	RGGWCCY	1 cut(s)	1422
Psp6I	CCWGG	5 cut(s)	67, 307, 771, 1969, 2468
PspGI	CCWGG	5 cut(s)	67, 307, 771, 1969, 2468
PspN4I	GGNNCC	7 cut(s)	248, 696, 1113, 1285, 1341, 1555, 2746
PspPI	GGNCC	3 cut(s)	352, 1284, 1422
PspPPI	RGGWCCY	1 cut(s)	1422
PstI	CTGCAG	1 cut(s)	708
PstNI	CAGNNNCTG	4 cut(s)	148, 1061, 1637, 2108
PsuI	RGATCY	5 cut(s)	630, 694, 1731, 1853, 2030
RsaI	GTAC	5 cut(s)	13, 1555, 1708, 2057, 2474
RsaNI	GTAC	5 cut(s)	12, 1554, 1707, 2056, 2473
RseI	CAYNNNNRTG	5 cut(s)	390, 810, 1455, 1862, 2238
SacI	GAGCTC	1 cut(s)	307
SalI	GTCGAC	2 cut(s)	399, 1933
SapI	GCTCTTC	3 cut(s)	104, 140, 1246
SaqAI	TTAA	9 cut(s)	263, 896, 1098, 1418, 1562, 1659, 2252, 2513, 2559
SatI	GCNGC	8 cut(s)	351, 596, 678, 704, 1184, 1266, 2507, 2737
Sau96I	GGNCC	3 cut(s)	352, 1284, 1422
SchI	GAGTC	5 cut(s)	501, 554, 2224, 2329, 2626
ScrFI	CCNGG	9 cut(s)	19, 69, 309, 699, 700, 773, 1971, 2119, 2470
SduI	GDGCHC	4 cut(s)	307, 733, 1528, 1970
SfaNI	GCATC	6 cut(s)	192, 595, 1170, 1756, 2199, 2266
SfcI	CTRYAG	3 cut(s)	704, 1122, 2451
Sfr274I	CTCGAG	1 cut(s)	2051
SinI	GGWCC	2 cut(s)	1284, 1422
SlaI	CTCGAG	1 cut(s)	2051
SmaI	CCCGGG	1 cut(s)	700
SmiI	ATTTAAAT	1 cut(s)	264
SmiMI	CAYNNNNRTG	5 cut(s)	390, 810, 1455, 1862, 2238
SmlI	CTYRAG	2 cut(s)	756, 2051
SmoI	CTYRAG	2 cut(s)	756, 2051
SpeI	ACTAGT	1 cut(s)	2366
SseBI	AGGCCT	2 cut(s)	67, 484
SsiI	CCGC	3 cut(s)	350, 761, 1007
SspI	AATATT	1 cut(s)	949
SstI	GAGCTC	1 cut(s)	307
StuI	AGGCCT	2 cut(s)	67, 484
StyD4I	CCNGG	9 cut(s)	17, 67, 307, 697, 698, 771, 1969, 2117, 2468
StyI	CCWWGG	2 cut(s)	355, 1084
SwaI	ATTTAAAT	1 cut(s)	264
TaaI	ACNGT	2 cut(s)	2438, 2477
TaiI	ACGT	1 cut(s)	792
TaqI	TCGA	9 cut(s)	102, 301, 400, 578, 1886, 1934, 2052, 2400, 2652
TauI	GCSGC	1 cut(s)	353
TfiI	GAWTC	6 cut(s)	476, 764, 1019, 1358, 1403, 1867
Tru1I	TTAA	9 cut(s)	263, 896, 1098, 1418, 1562, 1659, 2252, 2513, 2559
Tru9I	TTAA	9 cut(s)	263, 896, 1098, 1418, 1562, 1659, 2252, 2513, 2559
TscAI	CASTG	3 cut(s)	531, 1642, 1864
TseFI	GTSAC	3 cut(s)	526, 546, 1194
TseI	GCWGC	7 cut(s)	595, 677, 703, 1183, 1265, 2506, 2736
Tsp45I	GTSAC	3 cut(s)	526, 546, 1194
TspDTI	ATGAA	8 cut(s)	209, 737, 1125, 1833, 1980, 2305, 2534, 2688
TspGWI	ACGGA	2 cut(s)	1104, 2697
TspMI	CCCGGG	1 cut(s)	698
TspRI	CASTG	3 cut(s)	531, 1642, 1864
VneI	GTGCAC	1 cut(s)	1524
VpaK11BI	GGWCC	2 cut(s)	1284, 1422
XagI	CCTNNNNNAGG	1 cut(s)	1347
XapI	RAATTY	2 cut(s)	259, 1212
XbaI	TCTAGA	2 cut(s)	902, 1783
XceI	RCATGY	3 cut(s)	887, 926, 2241
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2290
XhoI	CTCGAG	1 cut(s)	2051
XmaI	CCCGGG	1 cut(s)	698
XmiI	GTMKAC	3 cut(s)	400, 710, 1934
XmnI	GAANNNNTTC	2 cut(s)	1212, 2587
Zsp2I	ATGCAT	2 cut(s)	2239, 2289

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.