Belongs to the ubiquitin-conjugating enzyme family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g16400 FvH4_4g16400 FvH4_4g16400 |
| malus_domestica | MD04G1008900.v1.1 |
| prunus_persica | Prupe.1G008300_v2.0.a1 Prupe.1G008300_v2.0.a1 Prupe.1G008300_v2.0.a1 Prupe.1G008300_v2.0.a1 Prupe.1G008300_v2.0.a1 Prupe.1G008300_v2.0.a1 Prupe.1G008300_v2.0.a1 |
| pyrus_communis | pycom04g00690 |
| rosa_laevigata | RLG00000008086 |
| rosa_multiflora | Rmu_sc0001421.1_g000010 |
| rosa_roxburghii | Rroxscaffold_5G00359060 |
| rosa_rugosa | Rorug04G0132500 |
| rosa_samantha | Rh4AG193300 Rh4BG191700 Rh4CG204400 Rh4DG191200 |
| rosa_wichuraiana | Rw4G016440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 266 |
| AciI | CCGC | 1 cut(s) | 489 |
| AclWI | GGATC | 1 cut(s) | 365 |
| AcsI | RAATTY | 1 cut(s) | 236 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 129, 170, 266 |
| AgsI | TTSAA | 3 cut(s) | 113, 127, 440 |
| Alw21I | GWGCWC | 1 cut(s) | 42 |
| AlwI | GGATC | 1 cut(s) | 365 |
| AoxI | GGCC | 1 cut(s) | 149 |
| ApeKI | GCWGC | 2 cut(s) | 343, 402 |
| ApoI | RAATTY | 1 cut(s) | 236 |
| AspS9I | GGNCC | 3 cut(s) | 101, 149, 385 |
| AsuHPI | GGTGA | 1 cut(s) | 281 |
| AvaII | GGWCC | 2 cut(s) | 101, 385 |
| BanII | GRGCYC | 1 cut(s) | 123 |
| BbsI | GAAGAC | 1 cut(s) | 523 |
| Bbv12I | GWGCWC | 1 cut(s) | 42 |
| BbvI | GCAGC | 2 cut(s) | 330, 389 |
| BccI | CCATC | 2 cut(s) | 239, 269 |
| BclI | TGATCA | 1 cut(s) | 141 |
| BfaI | CTAG | 1 cut(s) | 459 |
| BfmI | CTRYAG | 1 cut(s) | 91 |
| BisI | GCNGC | 2 cut(s) | 344, 403 |
| BlsI | GCNGC | 2 cut(s) | 345, 404 |
| Bme18I | GGWCC | 2 cut(s) | 101, 385 |
| BmgT120I | GGNCC | 3 cut(s) | 101, 149, 385 |
| BmiI | GGNNCC | 3 cut(s) | 150, 317, 387 |
| BmrI | ACTGGG | 1 cut(s) | 314 |
| BmuI | ACTGGG | 1 cut(s) | 314 |
| BpiI | GAAGAC | 1 cut(s) | 523 |
| BsaBI | GATNNNNATC | 1 cut(s) | 375 |
| BsaJI | CCNNGG | 1 cut(s) | 246 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 208, 238 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 129, 170, 266 |
| Bse1I | ACTGG | 4 cut(s) | 47, 104, 320, 458 |
| Bse8I | GATNNNNATC | 1 cut(s) | 375 |
| BseDI | CCNNGG | 1 cut(s) | 246 |
| BseGI | GGATG | 2 cut(s) | 256, 280 |
| BseJI | GATNNNNATC | 1 cut(s) | 375 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 129, 170, 266 |
| BseNI | ACTGG | 4 cut(s) | 47, 104, 320, 458 |
| BseXI | GCAGC | 2 cut(s) | 330, 389 |
| BshFI | GGCC | 1 cut(s) | 151 |
| BsiHKAI | GWGCWC | 1 cut(s) | 42 |
| BslFI | GGGAC | 2 cut(s) | 292, 464 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 129, 170, 266 |
| BsmFI | GGGAC | 2 cut(s) | 292, 464 |
| BsnI | GGCC | 1 cut(s) | 151 |
| Bsp1286I | GDGCHC | 2 cut(s) | 42, 123 |
| Bsp143I | GATC | 2 cut(s) | 141, 370 |
| BspACI | CCGC | 1 cut(s) | 489 |
| BspANI | GGCC | 1 cut(s) | 151 |
| BspLI | GGNNCC | 3 cut(s) | 150, 317, 387 |
| BspMAI | CTGCAG | 1 cut(s) | 95 |
| BspPI | GGATC | 1 cut(s) | 365 |
| BsrI | ACTGG | 4 cut(s) | 47, 104, 320, 458 |
| BssECI | CCNNGG | 1 cut(s) | 246 |
| BssMI | GATC | 2 cut(s) | 141, 370 |
| BssT1I | CCWWGG | 1 cut(s) | 246 |
| Bst6I | CTCTTC | 1 cut(s) | 416 |
| BstC8I | GCNNGC | 2 cut(s) | 17, 341 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 168 |
| BstF5I | GGATG | 2 cut(s) | 256, 280 |
| BstKTI | GATC | 2 cut(s) | 144, 373 |
| BstMBI | GATC | 2 cut(s) | 141, 370 |
| BstNSI | RCATGY | 1 cut(s) | 19 |
| BstSFI | CTRYAG | 1 cut(s) | 91 |
| BstV1I | GCAGC | 2 cut(s) | 330, 389 |
| BstV2I | GAAGAC | 1 cut(s) | 523 |
| BsuRI | GGCC | 1 cut(s) | 151 |
| BtsCI | GGATG | 2 cut(s) | 256, 280 |
| BtsI | GCAGTG | 1 cut(s) | 88 |
| BtsIMutI | CAGTG | 2 cut(s) | 40, 88 |
| Cac8I | GCNNGC | 2 cut(s) | 17, 341 |
| Cfr13I | GGNCC | 3 cut(s) | 101, 149, 385 |
| CviAII | CATG | 3 cut(s) | 16, 145, 399 |
| CviJI | RGCY | 4 cut(s) | 121, 151, 339, 434 |
| CviKI_1 | RGCY | 4 cut(s) | 121, 151, 339, 434 |
| DpnI | GATC | 2 cut(s) | 143, 372 |
| DpnII | GATC | 2 cut(s) | 141, 370 |
| Eam1104I | CTCTTC | 1 cut(s) | 416 |
| EarI | CTCTTC | 1 cut(s) | 416 |
| Eco130I | CCWWGG | 1 cut(s) | 246 |
| Eco24I | GRGCYC | 1 cut(s) | 123 |
| Eco47I | GGWCC | 2 cut(s) | 101, 385 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 168 |
| EcoO109I | RGGNCCY | 1 cut(s) | 149 |
| EcoT14I | CCWWGG | 1 cut(s) | 246 |
| EcoT38I | GRGCYC | 1 cut(s) | 123 |
| ErhI | CCWWGG | 1 cut(s) | 246 |
| FaeI | CATG | 3 cut(s) | 19, 148, 402 |
| FaqI | GGGAC | 2 cut(s) | 292, 464 |
| FatI | CATG | 3 cut(s) | 15, 144, 398 |
| FauI | CCCGC | 1 cut(s) | 482 |
| FauNDI | CATATG | 1 cut(s) | 353 |
| FbaI | TGATCA | 1 cut(s) | 141 |
| Fnu4HI | GCNGC | 2 cut(s) | 344, 403 |
| FokI | GGATG | 2 cut(s) | 243, 287 |
| FriOI | GRGCYC | 1 cut(s) | 123 |
| Fsp4HI | GCNGC | 2 cut(s) | 344, 403 |
| FspBI | CTAG | 1 cut(s) | 459 |
| GluI | GCNGC | 2 cut(s) | 344, 403 |
| HaeIII | GGCC | 1 cut(s) | 151 |
| Hin1II | CATG | 3 cut(s) | 19, 148, 402 |
| HphI | GGTGA | 1 cut(s) | 281 |
| Hpy188I | TCNGA | 2 cut(s) | 68, 416 |
| Hpy188III | TCNNGA | 2 cut(s) | 325, 365 |
| HpyAV | CCTTC | 4 cut(s) | 133, 162, 164, 416 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 35, 93 |
| Hsp92II | CATG | 3 cut(s) | 19, 148, 402 |
| Ksp22I | TGATCA | 1 cut(s) | 141 |
| Kzo9I | GATC | 2 cut(s) | 141, 370 |
| LpnPI | CCDG | 7 cut(s) | 28, 33, 117, 333, 338, 353, 439 |
| Lsp1109I | GCAGC | 2 cut(s) | 330, 389 |
| MaeI | CTAG | 1 cut(s) | 459 |
| MalI | GATC | 2 cut(s) | 143, 372 |
| MboI | GATC | 2 cut(s) | 141, 370 |
| MboII | GAAGA | 5 cut(s) | 125, 314, 317, 403, 528 |
| MhlI | GDGCHC | 2 cut(s) | 42, 123 |
| MluCI | AATT | 3 cut(s) | 108, 236, 282 |
| MnlI | CCTC | 5 cut(s) | 52, 167, 234, 265, 399 |
| MseI | TTAA | 1 cut(s) | 242 |
| NdeI | CATATG | 1 cut(s) | 353 |
| NdeII | GATC | 2 cut(s) | 141, 370 |
| NlaIII | CATG | 3 cut(s) | 19, 148, 402 |
| NlaIV | GGNNCC | 3 cut(s) | 150, 317, 387 |
| NspI | RCATGY | 1 cut(s) | 19 |
| PaeI | GCATGC | 1 cut(s) | 19 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 266 |
| PkrI | GCNGC | 2 cut(s) | 345, 404 |
| PspN4I | GGNNCC | 3 cut(s) | 150, 317, 387 |
| PspPI | GGNCC | 3 cut(s) | 101, 149, 385 |
| PstI | CTGCAG | 1 cut(s) | 95 |
| SaqAI | TTAA | 1 cut(s) | 242 |
| SatI | GCNGC | 2 cut(s) | 344, 403 |
| Sau3AI | GATC | 2 cut(s) | 141, 370 |
| Sau96I | GGNCC | 3 cut(s) | 101, 149, 385 |
| SduI | GDGCHC | 2 cut(s) | 42, 123 |
| SetI | ASST | 4 cut(s) | 139, 178, 226, 252 |
| SfcI | CTRYAG | 1 cut(s) | 91 |
| SinI | GGWCC | 2 cut(s) | 101, 385 |
| SphI | GCATGC | 1 cut(s) | 19 |
| Sse9I | AATT | 3 cut(s) | 108, 236, 282 |
| SsiI | CCGC | 1 cut(s) | 489 |
| SspMI | CTAG | 1 cut(s) | 459 |
| StyI | CCWWGG | 1 cut(s) | 246 |
| TasI | AATT | 3 cut(s) | 108, 236, 282 |
| Tru1I | TTAA | 1 cut(s) | 242 |
| Tru9I | TTAA | 1 cut(s) | 242 |
| TscAI | CASTG | 2 cut(s) | 47, 95 |
| TseI | GCWGC | 2 cut(s) | 343, 402 |
| TspDTI | ATGAA | 3 cut(s) | 144, 183, 324 |
| TspRI | CASTG | 2 cut(s) | 47, 95 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 266 |
| VpaK11BI | GGWCC | 2 cut(s) | 101, 385 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 168 |
| XapI | RAATTY | 1 cut(s) | 236 |
| XceI | RCATGY | 1 cut(s) | 19 |
| XspI | CTAG | 1 cut(s) | 459 |