Protein TIME FOR
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G22380 AT3G22380 AT3G22380 |
| fragaria_vesca | FvH4_4g15230 FvH4_4g15230 |
| malus_domestica | MD13G1190800.v1.1 MD16G1127600.v1.1 MD16G1191200.v1.1 |
| prunus_persica | Prupe.1G011200_v2.0.a1 Prupe.1G011200_v2.0.a1 |
| pyrus_communis | pycom07g23630 pycom13g16390 pycom16g16090 |
| rosa_chinensis | RchiOBHm_Chr4g0416621 |
| rosa_laevigata | RLG00000007965 |
| rosa_multiflora | Rmu_co8150674.1_g000001 Rmu_sc0003722.1_g000056 |
| rosa_roxburghii | Rroxscaffold_5G00360500 |
| rosa_rugosa | Rorug04G0143400 Rorug04G0143500 |
| rosa_samantha | Rh4AG205900 Rh4BG203300 Rh4CG216700 Rh4DG202800 |
| rosa_wichuraiana | Rw4G017420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 568, 784 |
| AatII | GACGTC | 2 cut(s) | 131, 785 |
| Acc36I | ACCTGC | 2 cut(s) | 4048, 4861 |
| AccB1I | GGYRCC | 4 cut(s) | 670, 1915, 2320, 2600 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 4304 |
| AccBSI | CCGCTC | 1 cut(s) | 363 |
| AccI | GTMKAC | 2 cut(s) | 560, 3750 |
| AccII | CGCG | 4 cut(s) | 207, 974, 1063, 3538 |
| AclWI | GGATC | 7 cut(s) | 162, 180, 222, 1207, 1544, 2113, 4649 |
| AcoI | YGGCCR | 4 cut(s) | 1883, 2003, 2084, 4171 |
| AcsI | RAATTY | 8 cut(s) | 615, 1006, 1240, 1487, 1622, 2185, 3043, 3871 |
| AcuI | CTGAAG | 5 cut(s) | 746, 1944, 2678, 3387, 3671 |
| AcyI | GRCGYC | 3 cut(s) | 128, 671, 782 |
| AfeI | AGCGCT | 1 cut(s) | 2307 |
| AgeI | ACCGGT | 1 cut(s) | 451 |
| AhlI | ACTAGT | 1 cut(s) | 3734 |
| AjnI | CCWGG | 9 cut(s) | 1195, 1880, 1885, 2170, 2224, 2314, 3470, 4780, 4821 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3562, 3594 |
| Alw21I | GWGCWC | 2 cut(s) | 1853, 1952 |
| AlwI | GGATC | 7 cut(s) | 162, 180, 222, 1207, 1544, 2113, 4649 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1202, 2384, 4676 |
| Ama87I | CYCGRG | 1 cut(s) | 4597 |
| Aor51HI | AGCGCT | 1 cut(s) | 2307 |
| ApaI | GGGCCC | 1 cut(s) | 3167 |
| ApoI | RAATTY | 8 cut(s) | 615, 1006, 1240, 1487, 1622, 2185, 3043, 3871 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 38, 70, 397, 429, 749, 767, 781, 799 |
| AsiGI | ACCGGT | 1 cut(s) | 451 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 443, 3436 |
| AspA2I | CCTAGG | 1 cut(s) | 4270 |
| AspLEI | GCGC | 6 cut(s) | 673, 974, 2194, 2308, 3063, 4447 |
| AsuC2I | CCSGG | 3 cut(s) | 194, 497, 3564 |
| AvaI | CYCGRG | 1 cut(s) | 4597 |
| AvaII | GGWCC | 9 cut(s) | 107, 196, 737, 854, 2228, 2342, 2621, 4763, 4819 |
| AvrII | CCTAGG | 1 cut(s) | 4270 |
| BaeGI | GKGCMC | 5 cut(s) | 2323, 2605, 3167, 3456, 4224 |
| BalI | TGGCCA | 3 cut(s) | 1885, 2086, 4173 |
| BanI | GGYRCC | 4 cut(s) | 670, 1915, 2320, 2600 |
| BanII | GRGCYC | 3 cut(s) | 1853, 3167, 4583 |
| BauI | CACGAG | 1 cut(s) | 3015 |
| BbsI | GAAGAC | 7 cut(s) | 70, 330, 675, 759, 1757, 3176, 4005 |
| Bbv12I | GWGCWC | 2 cut(s) | 1853, 1952 |
| BbvCI | CCTCAGC | 3 cut(s) | 746, 981, 3551 |
| BceAI | ACGGC | 7 cut(s) | 355, 847, 952, 973, 2930, 3320, 4568 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 361, 395, 2933, 2967, 4588, 4622 |
| BciT130I | CCWGG | 9 cut(s) | 1197, 1882, 1887, 2172, 2226, 2316, 3472, 4782, 4823 |
| BciVI | GTATCC | 2 cut(s) | 1945, 3481 |
| BclI | TGATCA | 2 cut(s) | 1147, 3757 |
| BcnI | CCSGG | 3 cut(s) | 194, 497, 3564 |
| BcuI | ACTAGT | 1 cut(s) | 3734 |
| BfaI | CTAG | 9 cut(s) | 1011, 1599, 2325, 2757, 2766, 3576, 3735, 4271, 4644 |
| BfmI | CTRYAG | 9 cut(s) | 1203, 1545, 2297, 2433, 2475, 2894, 2900, 3708, 4677 |
| BfoI | RGCGCY | 2 cut(s) | 674, 2309 |
| BfuAI | ACCTGC | 2 cut(s) | 4048, 4861 |
| BfuI | GTATCC | 2 cut(s) | 1945, 3481 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1891 |
| BglII | AGATCT | 1 cut(s) | 1498 |
| BlnI | CCTAGG | 1 cut(s) | 4270 |
| BlpI | GCTNAGC | 3 cut(s) | 1272, 1812, 2631 |
| Bme18I | GGWCC | 9 cut(s) | 107, 196, 737, 854, 2228, 2342, 2621, 4763, 4819 |
| BmeT110I | CYCGRG | 1 cut(s) | 4597 |
| BmrI | ACTGGG | 3 cut(s) | 2716, 2817, 4218 |
| BmuI | ACTGGG | 3 cut(s) | 2716, 2817, 4218 |
| BoxI | GACNNNNGTC | 1 cut(s) | 105 |
| BpiI | GAAGAC | 7 cut(s) | 70, 330, 675, 759, 1757, 3176, 4005 |
| Bpu10I | CCTNAGC | 5 cut(s) | 746, 981, 1554, 3551, 4557 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 1272, 1812, 2631 |
| BpuEI | CTTGAG | 3 cut(s) | 2981, 3174, 4011 |
| BpuMI | CCSGG | 3 cut(s) | 194, 497, 3564 |
| BsaBI | GATNNNNATC | 5 cut(s) | 159, 165, 171, 213, 1416 |
| BsaHI | GRCGYC | 3 cut(s) | 128, 671, 782 |
| BsaI | GGTCTC | 6 cut(s) | 177, 183, 195, 576, 603, 1462 |
| BsaWI | WCCGGW | 4 cut(s) | 109, 435, 451, 640 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1159, 1189, 2473, 2503 |
| Bse118I | RCCGGY | 3 cut(s) | 451, 621, 4831 |
| Bse3DI | GCAATG | 6 cut(s) | 2023, 2031, 2125, 2508, 3057, 3459 |
| Bse8I | GATNNNNATC | 5 cut(s) | 159, 165, 171, 213, 1416 |
| BseBI | CCWGG | 9 cut(s) | 1197, 1882, 1887, 2172, 2226, 2316, 3472, 4782, 4823 |
| BseJI | GATNNNNATC | 5 cut(s) | 159, 165, 171, 213, 1416 |
| BseMI | GCAATG | 6 cut(s) | 2023, 2031, 2125, 2508, 3057, 3459 |
| BseRI | GAGGAG | 6 cut(s) | 314, 621, 1006, 3399, 3849, 4056 |
| BseSI | GKGCMC | 5 cut(s) | 2323, 2605, 3167, 3456, 4224 |
| BseYI | CCCAGC | 1 cut(s) | 2497 |
| BsgI | GTGCAG | 1 cut(s) | 4734 |
| Bsh1236I | CGCG | 4 cut(s) | 207, 974, 1063, 3538 |
| Bsh1285I | CGRYCG | 1 cut(s) | 491 |
| BshNI | GGYRCC | 4 cut(s) | 670, 1915, 2320, 2600 |
| BshTI | ACCGGT | 1 cut(s) | 451 |
| BsiEI | CGRYCG | 1 cut(s) | 491 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1853, 1952 |
| BsiHKCI | CYCGRG | 1 cut(s) | 4597 |
| BsiWI | CGTACG | 1 cut(s) | 3965 |
| BslFI | GGGAC | 5 cut(s) | 209, 867, 2217, 4042, 4244 |
| BsmBI | CGTCTC | 3 cut(s) | 119, 1179, 4197 |
| BsmFI | GGGAC | 5 cut(s) | 209, 867, 2217, 4042, 4244 |
| BsmI | GAATGC | 3 cut(s) | 1645, 3464, 4633 |
| Bso31I | GGTCTC | 6 cut(s) | 177, 183, 195, 576, 603, 1462 |
| BsoBI | CYCGRG | 1 cut(s) | 4597 |
| Bsp120I | GGGCCC | 1 cut(s) | 3163 |
| Bsp1286I | GDGCHC | 8 cut(s) | 1853, 1952, 2323, 2605, 3167, 3456, 4224, 4583 |
| Bsp1407I | TGTACA | 1 cut(s) | 4798 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 1272, 1812, 2631 |
| Bsp19I | CCATGG | 2 cut(s) | 1938, 3423 |
| BspFNI | CGCG | 4 cut(s) | 207, 974, 1063, 3538 |
| BspHI | TCATGA | 1 cut(s) | 574 |
| BspMAI | CTGCAG | 7 cut(s) | 1207, 2301, 2437, 2479, 2904, 3712, 4681 |
| BspMI | ACCTGC | 2 cut(s) | 4048, 4861 |
| BspPI | GGATC | 7 cut(s) | 162, 180, 222, 1207, 1544, 2113, 4649 |
| BspQI | GCTCTTC | 1 cut(s) | 19 |
| BspT107I | GGYRCC | 4 cut(s) | 670, 1915, 2320, 2600 |
| BspTNI | GGTCTC | 6 cut(s) | 177, 183, 195, 576, 603, 1462 |
| BsrBI | CCGCTC | 1 cut(s) | 363 |
| BsrDI | GCAATG | 6 cut(s) | 2023, 2031, 2125, 2508, 3057, 3459 |
| BsrFI | RCCGGY | 3 cut(s) | 451, 621, 4831 |
| BsrGI | TGTACA | 1 cut(s) | 4798 |
| BssAI | RCCGGY | 3 cut(s) | 451, 621, 4831 |
| BssNI | GRCGYC | 3 cut(s) | 128, 671, 782 |
| BssSI | CACGAG | 1 cut(s) | 3015 |
| BssT1I | CCWWGG | 4 cut(s) | 1158, 1938, 3423, 4270 |
| Bst2BI | CACGAG | 1 cut(s) | 3015 |
| Bst2UI | CCWGG | 9 cut(s) | 1197, 1882, 1887, 2172, 2226, 2316, 3472, 4782, 4823 |
| Bst6I | CTCTTC | 6 cut(s) | 19, 235, 560, 1629, 3344, 3781 |
| BstACI | GRCGYC | 3 cut(s) | 128, 671, 782 |
| BstAPI | GCANNNNNTGC | 7 cut(s) | 2308, 2384, 2486, 3122, 3637, 3649, 4676 |
| BstAUI | TGTACA | 1 cut(s) | 4798 |
| BstDSI | CCRYGG | 3 cut(s) | 1938, 3423, 4815 |
| BstEII | GGTNACC | 1 cut(s) | 508 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 1923, 2175, 3369 |
| BstFNI | CGCG | 4 cut(s) | 207, 974, 1063, 3538 |
| BstH2I | RGCGCY | 2 cut(s) | 674, 2309 |
| BstHHI | GCGC | 6 cut(s) | 673, 974, 2194, 2308, 3063, 4447 |
| BstMCI | CGRYCG | 1 cut(s) | 491 |
| BstNI | CCWGG | 9 cut(s) | 1197, 1882, 1887, 2172, 2226, 2316, 3472, 4782, 4823 |
| BstNSI | RCATGY | 3 cut(s) | 838, 3962, 4805 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 105 |
| BstPI | GGTNACC | 1 cut(s) | 508 |
| BstSFI | CTRYAG | 9 cut(s) | 1203, 1545, 2297, 2433, 2475, 2894, 2900, 3708, 4677 |
| BstSLI | GKGCMC | 5 cut(s) | 2323, 2605, 3167, 3456, 4224 |
| BstUI | CGCG | 4 cut(s) | 207, 974, 1063, 3538 |
| BstV2I | GAAGAC | 7 cut(s) | 70, 330, 675, 759, 1757, 3176, 4005 |
| BstX2I | RGATCY | 4 cut(s) | 1199, 1498, 1549, 2105 |
| BstYI | RGATCY | 4 cut(s) | 1199, 1498, 1549, 2105 |
| BsuI | GTATCC | 2 cut(s) | 1945, 3481 |
| BtgI | CCRYGG | 3 cut(s) | 1938, 3423, 4815 |
| BtgZI | GCGATG | 3 cut(s) | 300, 942, 3240 |
| BtsI | GCAGTG | 2 cut(s) | 1770, 2848 |
| BveI | ACCTGC | 2 cut(s) | 4048, 4861 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1202, 2384, 4676 |
| CciI | TCATGA | 1 cut(s) | 574 |
| CfoI | GCGC | 6 cut(s) | 673, 974, 2194, 2308, 3063, 4447 |
| Cfr10I | RCCGGY | 3 cut(s) | 451, 621, 4831 |
| CseI | GACGC | 2 cut(s) | 546, 3736 |
| CspAI | ACCGGT | 1 cut(s) | 451 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1854, 1889, 2250, 2285 |
| DinI | GGCGCC | 1 cut(s) | 672 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 568, 784 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 568, 784 |
| EaeI | YGGCCR | 4 cut(s) | 1883, 2003, 2084, 4171 |
| Eam1104I | CTCTTC | 6 cut(s) | 19, 235, 560, 1629, 3344, 3781 |
| EarI | CTCTTC | 6 cut(s) | 19, 235, 560, 1629, 3344, 3781 |
| EciI | GGCGGA | 2 cut(s) | 375, 1233 |
| Ecl136II | GAGCTC | 1 cut(s) | 1851 |
| Eco130I | CCWWGG | 4 cut(s) | 1158, 1938, 3423, 4270 |
| Eco24I | GRGCYC | 3 cut(s) | 1853, 3167, 4583 |
| Eco31I | GGTCTC | 6 cut(s) | 177, 183, 195, 576, 603, 1462 |
| Eco32I | GATATC | 1 cut(s) | 3990 |
| Eco47I | GGWCC | 9 cut(s) | 107, 196, 737, 854, 2228, 2342, 2621, 4763, 4819 |
| Eco47III | AGCGCT | 1 cut(s) | 2307 |
| Eco53kI | GAGCTC | 1 cut(s) | 1851 |
| Eco57I | CTGAAG | 5 cut(s) | 746, 1944, 2678, 3387, 3671 |
| Eco88I | CYCGRG | 1 cut(s) | 4597 |
| Eco91I | GGTNACC | 1 cut(s) | 508 |
| EcoICRI | GAGCTC | 1 cut(s) | 1851 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 1923, 2175, 3369 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2621, 3163 |
| EcoO65I | GGTNACC | 1 cut(s) | 508 |
| EcoRI | GAATTC | 3 cut(s) | 1006, 2185, 3871 |
| EcoRII | CCWGG | 9 cut(s) | 1195, 1880, 1885, 2170, 2224, 2314, 3470, 4780, 4821 |
| EcoRV | GATATC | 1 cut(s) | 3990 |
| EcoT14I | CCWWGG | 4 cut(s) | 1158, 1938, 3423, 4270 |
| EcoT22I | ATGCAT | 1 cut(s) | 2572 |
| EcoT38I | GRGCYC | 3 cut(s) | 1853, 3167, 4583 |
| EgeI | GGCGCC | 1 cut(s) | 672 |
| EheI | GGCGCC | 1 cut(s) | 672 |
| ErhI | CCWWGG | 4 cut(s) | 1158, 1938, 3423, 4270 |
| Esp3I | CGTCTC | 3 cut(s) | 119, 1179, 4197 |
| FaqI | GGGAC | 5 cut(s) | 209, 867, 2217, 4042, 4244 |
| FauI | CCCGC | 6 cut(s) | 658, 1883, 2613, 3601, 4241, 4629 |
| FbaI | TGATCA | 2 cut(s) | 1147, 3757 |
| FblI | GTMKAC | 2 cut(s) | 560, 3750 |
| FriOI | GRGCYC | 3 cut(s) | 1853, 3167, 4583 |
| FspBI | CTAG | 9 cut(s) | 1011, 1599, 2325, 2757, 2766, 3576, 3735, 4271, 4644 |
| GlaI | GCGC | 6 cut(s) | 672, 973, 2193, 2307, 3062, 4446 |
| GsaI | CCCAGC | 1 cut(s) | 2501 |
| HaeII | RGCGCY | 2 cut(s) | 674, 2309 |
| HgaI | GACGC | 2 cut(s) | 546, 3736 |
| HhaI | GCGC | 6 cut(s) | 673, 974, 2194, 2308, 3063, 4447 |
| Hin1I | GRCGYC | 3 cut(s) | 128, 671, 782 |
| Hin6I | GCGC | 6 cut(s) | 671, 972, 2192, 2306, 3061, 4445 |
| HinP1I | GCGC | 6 cut(s) | 671, 972, 2192, 2306, 3061, 4445 |
| HincII | GTYRAC | 4 cut(s) | 561, 2738, 3924, 4279 |
| HindII | GTYRAC | 4 cut(s) | 561, 2738, 3924, 4279 |
| HindIII | AAGCTT | 7 cut(s) | 442, 627, 2848, 3192, 3435, 4176, 4482 |
| HpyCH4IV | ACGT | 2 cut(s) | 128, 782 |
| HpySE526I | ACGT | 2 cut(s) | 128, 782 |
| Hsp92I | GRCGYC | 3 cut(s) | 128, 671, 782 |
| HspAI | GCGC | 6 cut(s) | 671, 972, 2192, 2306, 3061, 4445 |
| KasI | GGCGCC | 1 cut(s) | 670 |
| Ksp22I | TGATCA | 2 cut(s) | 1147, 3757 |
| LguI | GCTCTTC | 1 cut(s) | 19 |
| LmnI | GCTCC | 9 cut(s) | 228, 1019, 1279, 1513, 1947, 2467, 2494, 2682, 3619 |
| MaeI | CTAG | 9 cut(s) | 1011, 1599, 2325, 2757, 2766, 3576, 3735, 4271, 4644 |
| MaeII | ACGT | 2 cut(s) | 128, 782 |
| MbiI | CCGCTC | 1 cut(s) | 363 |
| MfeI | CAATTG | 1 cut(s) | 4319 |
| MflI | RGATCY | 4 cut(s) | 1199, 1498, 1549, 2105 |
| MhlI | GDGCHC | 8 cut(s) | 1853, 1952, 2323, 2605, 3167, 3456, 4224, 4583 |
| MlsI | TGGCCA | 3 cut(s) | 1885, 2086, 4173 |
| MluNI | TGGCCA | 3 cut(s) | 1885, 2086, 4173 |
| Mly113I | GGCGCC | 1 cut(s) | 671 |
| MlyI | GAGTC | 5 cut(s) | 83, 1400, 2584, 3018, 4714 |
| Mox20I | TGGCCA | 3 cut(s) | 1885, 2086, 4173 |
| Mph1103I | ATGCAT | 1 cut(s) | 2572 |
| MroXI | GAANNNNTTC | 2 cut(s) | 443, 3436 |
| MscI | TGGCCA | 3 cut(s) | 1885, 2086, 4173 |
| MseI | TTAA | 4 cut(s) | 891, 1992, 2649, 3546 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1803, 2598, 2823 |
| Msp20I | TGGCCA | 3 cut(s) | 1885, 2086, 4173 |
| MunI | CAATTG | 1 cut(s) | 4319 |
| Mva1269I | GAATGC | 3 cut(s) | 1645, 3464, 4633 |
| MvaI | CCWGG | 9 cut(s) | 1197, 1882, 1887, 2172, 2226, 2316, 3472, 4782, 4823 |
| MvnI | CGCG | 4 cut(s) | 207, 974, 1063, 3538 |
| NarI | GGCGCC | 1 cut(s) | 671 |
| NciI | CCSGG | 3 cut(s) | 194, 497, 3564 |
| NcoI | CCATGG | 2 cut(s) | 1938, 3423 |
| NmeAIII | GCCGAG | 3 cut(s) | 686, 844, 1981 |
| NmuCI | GTSAC | 7 cut(s) | 508, 877, 1021, 1141, 2724, 4314, 4611 |
| NsiI | ATGCAT | 1 cut(s) | 2572 |
| NspI | RCATGY | 3 cut(s) | 838, 3962, 4805 |
| PaeI | GCATGC | 2 cut(s) | 838, 3962 |
| PaeR7I | CTCGAG | 1 cut(s) | 4597 |
| PagI | TCATGA | 1 cut(s) | 574 |
| PciSI | GCTCTTC | 1 cut(s) | 19 |
| PcsI | WCGNNNNNNNCGW | 7 cut(s) | 333, 776, 944, 956, 965, 971, 3013 |
| PctI | GAATGC | 3 cut(s) | 1645, 3464, 4633 |
| PdmI | GAANNNNTTC | 2 cut(s) | 443, 3436 |
| Pfl23II | CGTACG | 1 cut(s) | 3965 |
| PflFI | GACNNNGTC | 3 cut(s) | 781, 784, 1171 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 4304 |
| PfoI | TCCNGGA | 1 cut(s) | 3470 |
| PinAI | ACCGGT | 1 cut(s) | 451 |
| PleI | GAGTC | 5 cut(s) | 83, 1399, 2584, 3017, 4714 |
| PluTI | GGCGCC | 1 cut(s) | 674 |
| PpsI | GAGTC | 5 cut(s) | 83, 1399, 2584, 3017, 4714 |
| PpuMI | RGGWCCY | 1 cut(s) | 2621 |
| PshAI | GACNNNNGTC | 1 cut(s) | 105 |
| Psp124BI | GAGCTC | 1 cut(s) | 1853 |
| Psp5II | RGGWCCY | 1 cut(s) | 2621 |
| Psp6I | CCWGG | 9 cut(s) | 1195, 1880, 1885, 2170, 2224, 2314, 3470, 4780, 4821 |
| PspEI | GGTNACC | 1 cut(s) | 508 |
| PspFI | CCCAGC | 1 cut(s) | 2497 |
| PspGI | CCWGG | 9 cut(s) | 1195, 1880, 1885, 2170, 2224, 2314, 3470, 4780, 4821 |
| PspLI | CGTACG | 1 cut(s) | 3965 |
| PspOMI | GGGCCC | 1 cut(s) | 3163 |
| PspPPI | RGGWCCY | 1 cut(s) | 2621 |
| PspXI | VCTCGAGB | 1 cut(s) | 4597 |
| PstI | CTGCAG | 7 cut(s) | 1207, 2301, 2437, 2479, 2904, 3712, 4681 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1202, 2384, 4676 |
| PsuI | RGATCY | 4 cut(s) | 1199, 1498, 1549, 2105 |
| PsyI | GACNNNGTC | 3 cut(s) | 781, 784, 1171 |
| PvuII | CAGCTG | 9 cut(s) | 985, 1208, 1964, 2096, 2381, 2474, 2899, 4676, 4682 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1803, 2598, 2823 |
| SacI | GAGCTC | 1 cut(s) | 1853 |
| SalI | GTCGAC | 1 cut(s) | 559 |
| SapI | GCTCTTC | 1 cut(s) | 19 |
| SaqAI | TTAA | 4 cut(s) | 891, 1992, 2649, 3546 |
| SchI | GAGTC | 5 cut(s) | 83, 1400, 2584, 3018, 4714 |
| SduI | GDGCHC | 8 cut(s) | 1853, 1952, 2323, 2605, 3167, 3456, 4224, 4583 |
| SfcI | CTRYAG | 9 cut(s) | 1203, 1545, 2297, 2433, 2475, 2894, 2900, 3708, 4677 |
| SfoI | GGCGCC | 1 cut(s) | 672 |
| Sfr274I | CTCGAG | 1 cut(s) | 4597 |
| SgrAI | CRCCGGYG | 1 cut(s) | 451 |
| SgrDI | CGTCGACG | 1 cut(s) | 559 |
| SinI | GGWCC | 9 cut(s) | 107, 196, 737, 854, 2228, 2342, 2621, 4763, 4819 |
| SlaI | CTCGAG | 1 cut(s) | 4597 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1803, 2598, 2823 |
| SmlI | CTYRAG | 4 cut(s) | 2960, 3189, 4026, 4597 |
| SmoI | CTYRAG | 4 cut(s) | 2960, 3189, 4026, 4597 |
| SpeI | ACTAGT | 1 cut(s) | 3734 |
| SphI | GCATGC | 2 cut(s) | 838, 3962 |
| SspDI | GGCGCC | 1 cut(s) | 670 |
| SspI | AATATT | 4 cut(s) | 1726, 2044, 2167, 4540 |
| SspMI | CTAG | 9 cut(s) | 1011, 1599, 2325, 2757, 2766, 3576, 3735, 4271, 4644 |
| SstI | GAGCTC | 1 cut(s) | 1853 |
| StyI | CCWWGG | 4 cut(s) | 1158, 1938, 3423, 4270 |
| TaiI | ACGT | 2 cut(s) | 131, 785 |
| TaqII | GACCGA | 3 cut(s) | 201, 213, 871 |
| TatI | WGTACW | 2 cut(s) | 2447, 4798 |
| TauI | GCSGC | 7 cut(s) | 41, 285, 671, 754, 3148, 4573, 4670 |
| Tru1I | TTAA | 4 cut(s) | 891, 1992, 2649, 3546 |
| Tru9I | TTAA | 4 cut(s) | 891, 1992, 2649, 3546 |
| TseFI | GTSAC | 7 cut(s) | 508, 877, 1021, 1141, 2724, 4314, 4611 |
| Tsp45I | GTSAC | 7 cut(s) | 508, 877, 1021, 1141, 2724, 4314, 4611 |
| TspGWI | ACGGA | 6 cut(s) | 276, 523, 669, 750, 1595, 3500 |
| Tth111I | GACNNNGTC | 3 cut(s) | 781, 784, 1171 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 4304 |
| VpaK11BI | GGWCC | 9 cut(s) | 107, 196, 737, 854, 2228, 2342, 2621, 4763, 4819 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 1923, 2175, 3369 |
| XapI | RAATTY | 8 cut(s) | 615, 1006, 1240, 1487, 1622, 2185, 3043, 3871 |
| XceI | RCATGY | 3 cut(s) | 838, 3962, 4805 |
| XhoI | CTCGAG | 1 cut(s) | 4597 |
| XmaJI | CCTAGG | 1 cut(s) | 4270 |
| XmiI | GTMKAC | 2 cut(s) | 560, 3750 |
| XmnI | GAANNNNTTC | 2 cut(s) | 443, 3436 |
| XspI | CTAG | 9 cut(s) | 1011, 1599, 2325, 2757, 2766, 3576, 3735, 4271, 4644 |
| ZraI | GACGTC | 2 cut(s) | 129, 783 |
| Zsp2I | ATGCAT | 1 cut(s) | 2572 |